Carg11364-RA (mRNA) Silver-seed gourd

NameCarg11364-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_025 : 499286 .. 500582 (+)
Sequence length453
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATGAGGAACGAAAAGGAGTACAAATTGAAAGGAATCTAATACAAGCTTACAATAGACAAAAGGAGGATTATAATCAGAAGAAAAAGCAAAAAGCAGTGCATGGTGTAGGTAGGTGGCTGTTCCGAATGTGCTTTAGCTTAACCAAAAAGCAAAGGCAGATATTCTGGCCTTACCTGCCCAGACAATTGCAGAGTTTTCTGAATCTCCCTTTCGTTCTTCTGCTTTAAACATCCCCCCCTTGCAGTTGCAACAGTACTGAGCATGTCTGAGATCGAAGGACAACTGTATATACCAAATTCAAATTCTGCGGTGCCAAAATGAGAAGCCAAAGAATGTGAATATTCTTCATGTTTTCCATATTTTTGACAAATGGAAGTAAAATTATAAGATTCGTGAATTTTGATTTCTTCTTTTTCGTTCTTCAATCGTAAGAATACAATTAACAGAAACTCAAAAGAGAAACCTAATTTCTCTTGTTTCTACATTTTTTCCTGAATCATTTTGAATCGCGGATCATAATGGGAGAGAATTGCTCAAAAGTTGTAAGGTGGAATCAATGATTCTAAGAACACAACAATCCCTGCAATAAACACCAGAAATTGCCAATTAGAATCAAACAACAATAACGAGATAACTTCCACATTCATATGCATATAACCACAACGGATATATACAAGTAAGCTCATACACTTTTGAAGTTCGTATTTGTAGACTGAAAATGAAAATCATGCTTATAATCAATAAGTAGACAATAGCGGTTTATGTACGATTCTAATTCTTTACTTCGACAATTATGAGTAAGTAAATATAGTTTTTCCGTTTCCTTTTCTCTTCGATTTCTCGTTCGCTTGAATAAAAACTCTCTGCGAATACGTTTGTTTCAAGTTTCAAGCATAAAACGCAATGATTTCACGATTTCTCAAACAATCCTGAATCTACTGCAGGTTCTTTCACATTAGAGCGAATCGATTTCGAAAACAATAAAACGAAACAGAGCAGTCACTACGTAAATCACAATGAGATCGTGAGAGCACTTACTCCGAAACAAGTTATAAGTTTCCTCCATGCCTTCTTCGCATTCTCAAGCTTCGAGAGAACCTCATAACCAGAGCAAACATCAGCCGGCGAATCCAGAAACACTCGCCGCGGAATCGGCGGAGACCACAAACTACTCTGTTCGTAATCGAAGTCGAATTTCGAGGCATCGAAGAACTTGCCGAGAAGGCGATCCGACGCCAATTTAGACACGAGTTGAACGCTCAGACTCTTCGGAGTAGCGCAATCAAGAAATGA

mRNA sequence

ATGTATGAGGAACGAAAAGGAGTACAAATTGAAAGGAATCTAATACAAGCTTACAATAGACAAAAGGAGGATTATAATCAGAAGAAAAAGCAAAAAGCAGTGCATGGTGTAGGTTCTTTCACATTAGAGCGAATCGATTTCGAAAACAATAAAACGAAACAGAGCAGTCACTACGTAAATCACAATGAGATCGTGAGAGCACTTACTCCGAAACAATTTCCTCCATGCCTTCTTCGCATTCTCAAGCTTCGAGAGAACCTCATAACCAGAGCAAACATCAGCCGGCGAATCCAGAAACACTCGCCGCGGAATCGGCGGAGACCACAAACTACTCTGTTCGTAATCGAAGTCGAATTTCGAGGCATCGAAGAACTTGCCGAGAAGGCGATCCGACGCCAATTTAGACACGAGTTGAACGCTCAGACTCTTCGGAGTAGCGCAATCAAGAAATGA

Coding sequence (CDS)

ATGTATGAGGAACGAAAAGGAGTACAAATTGAAAGGAATCTAATACAAGCTTACAATAGACAAAAGGAGGATTATAATCAGAAGAAAAAGCAAAAAGCAGTGCATGGTGTAGGTTCTTTCACATTAGAGCGAATCGATTTCGAAAACAATAAAACGAAACAGAGCAGTCACTACGTAAATCACAATGAGATCGTGAGAGCACTTACTCCGAAACAATTTCCTCCATGCCTTCTTCGCATTCTCAAGCTTCGAGAGAACCTCATAACCAGAGCAAACATCAGCCGGCGAATCCAGAAACACTCGCCGCGGAATCGGCGGAGACCACAAACTACTCTGTTCGTAATCGAAGTCGAATTTCGAGGCATCGAAGAACTTGCCGAGAAGGCGATCCGACGCCAATTTAGACACGAGTTGAACGCTCAGACTCTTCGGAGTAGCGCAATCAAGAAATGA

Protein sequence

MYEERKGVQIERNLIQAYNRQKEDYNQKKKQKAVHGVGSFTLERIDFENNKTKQSSHYVNHNEIVRALTPKQFPPCLLRILKLRENLITRANISRRIQKHSPRNRRRPQTTLFVIEVEFRGIEELAEKAIRRQFRHELNAQTLRSSAIKK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg11364Carg11364gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg11364-RACarg11364-RA-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg11364-RA.exon.1Carg11364-RA.exon.1exon
Carg11364-RA.exon.2Carg11364-RA.exon.2exon
Carg11364-RA.exon.3Carg11364-RA.exon.3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg11364-RA.CDS.1Carg11364-RA.CDS.1CDS
Carg11364-RA.CDS.2Carg11364-RA.CDS.2CDS
Carg11364-RA.CDS.3Carg11364-RA.CDS.3CDS


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..28