Carg11138-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGAGATGGCTAAGCCACCTTCAATGCGGTTAATGATCTTGTTCACTACGAAACGCACACTATCAGACGAAAACGGATGAAGATTTCGAAGATTACTCACCGTGCCGGCCGTTGATCTTGGACTTGCAGGAAGTTCTTCTGCAATTTCCGATAGTTGTTAGAGAAATCGAGACAGAGAGCTGCCATGGACGCGATCGAACACACCACCATCAACACCAATGGAATCAAAATGCACATCGCCTCCATAGGCACAGGCCCCGTCGTTCTTCTTCTCCACGGCTTCCCCGAGCTCTGGTACTCATGGCGCCACCAGCTTCTCTACCTTTCTTCCGTCGGATATCGGGCCATCGCGCCGGACCTCCGCGGGTATGGCGATACCGAGTCCCCGGAATCGCATACTTCCTACACTGTGCTCCATATCGTCGGCGATTTGGTTGGGGCTTTGGATGAGCTTGGGATTGAGAAGGTGTTTGTTGTAGGGCACGATTGGGGGGCGATCATCGCGTGGTACTTTTGCCTGTTTAGACCTGATAGAATCAAGGCGTTGGTGAATCTGAGCGTCCAGTTCATACCTAGGAACCCTGCAATTCCTTTTGTTGAGGGTTTCAGATCTGCGTTTGGTGATGACTTCTACATTTGCAGGTTTCAGGTGAATATAATTTGTATTAGTTGCTTATGTTAGAGGGTCAATTATAAGATTGGTTAACTCATGGTTTAGCCTTCTTCAGTTCCGTTTCCAACCATGGTGAGATCTCACACTGCCCTGTTATTTATAGGCGTTTGGTCTCCATGCTTATAAAGAATGATTCGTTCTCTTCTCCAACTAACGTGAGATCATGATCTCACAATCCATCCTTGAGTTAAGCTAATGTGAGATCTCACAATCCATCCTTGAGTTAAGCTAATGTGAGATCTCACAATCCATCCTTGAGTTAAGCTAATGTGAGATCTCACAATCCATCCCCGAGTTAAGCTAATGTGAGATCTCACAATCCATCCCCTTGCGGCCTAGTTATGGAGAGATTTCTACACCCTTTTAGATTCATTTCGCTCTACCATTAACGTGAGATCTCATCATCCATCCCTTTGGAGCCCAACTAATAGGGAGAGATTTTCACACCTTTATAAGGAATATTCATTCCCCTCGTTAATCAACGTGAGATCATCCCCTTGAGGGCTAGTGTGCCATCCATCCCCTTGGGGGATAGTGTCCTCACTGGCACACTGCTCGGTGTTTGGCTCTAATACCATTTGTAACGAGTCCACTTTGTCCCGTTATGTATCGCTGTTAGCCTCACGATTTTAAAATACGTCTACTAGGGAGAGATTCTCACAAGAAATGCTTCGACCCCTCTCCAACCAATGTGAAATCTCACGATATGTCTTCATATCAAAGAATCATGTTCTCTTTAATTTGTTAAGTTGTACTTATTTAAAGAGCCCCATTTGATTGAATCACCAGAAAGTTTCACGTTCATATAAACAGCAGAAACTAAAATGAATTGGATCCTAACAGGTTCCAGGAGAGGCTGAAGAAGATTTTGCCTCCATTGACACAGCTGAGTTATTCAAGAAATTTCTCTGTAGTAGAAGATCAGATCCTCCAAAACTGCCCAAAGGGGTTGGAGTTCGTTCTATCCCATCCCCAGAAAACCTTCCTTCTTGGCTGACAGAAAAAGATATCAACTATTTTGCTACCACTTTCAAGCGGACAGGCTTTACTGGAGGATTGAACTACTACAGAGCCTTCGACCTGTAAGTCGTAGATTTAGCCATTCAGATTGCTCTGTTCTTATTAGTTCAATCCAATTGTTCCATTCCTTTCAAGTTCAAATCATGTTTTTTTGTTGCAGAACTTGGGAGCTGACTGCATCATGGACAAAGGCACAGGTTCGAGTGCCGGTGAAGTTCATCATCGGGGATTTGGATCTGACCTACCAGTTTCCAGGAGCCAAGGAATATATCCACAATGGGGGATTCAAGAAGGATGTGCCGTTTCTGGAGGAAGTGATAGTAATGAAAGATACTGCTCACTTCATCAACCAAGAAAGGCCACATGAAATCAGTACTCACATCCATGACTTTATCAAGAAATTTTGAACTCCATCCATTCTCCATTGCTTGAATTGTTCTTTCTTTTTTCAGTGACTTTGAGTAAAGGATAATTTTCATCACACCCGTTTGCAGAGTGTAGTTTCTAATTATAAATAAAGGCTATAAGGTCGTAGGTTGTGACGTTCATCGAGGATCAACTATATGGGTTTCGTTGAAGAATAGGAAAAGATGACTACTAAATTTTGAACTTTTCTCTTATATACGACACCATCTAATGCCCTCTCCAATGAGACTGGCCACTTGAGGATGTGTTGAATTCAAGTCAATCATGTGTGTTGATTTCTTTAAGGTTTAACTTCAAAATGAGTCCCAACCATCTTTGAACCTTCTCATCCATCTTCCGAACTATGTGAACTTACGAGTTCATGTCAAAGCTTATCGGGAGCAATATCACAAGATACTTCCATTTAATTACGATAAAAGGCCTACATCCAAGTTTCATAAGCTTTGGGTCCACTATTTTGATCGTCATTTTCCTACTCCCAACAGAAGCCATCAGAAACTCAAGGGTCGCCGAACCCTATACAAGGGCCAATCTAATCTCACATATCTAATCATTTTTCACAGTTATTTTGATTCATATGCTTAAATAAATGTTTTGTTCATACAAACTTTTTTTTTCTTCCAGCCAACTCTCATTCTCCAATATAACAAATACAAAATCTACAATATCAACCATACTCGAACTCGCTATGTCGTAAAAGTAAAATTCTGCTACACCTAAGGCTCGAGTAATCTACATACTAGACAAAATTCAGTTCAAGAATTAAGCTGTACTTACTGGATTTCTCCCTCAACACTTCAGCAGCAGCTCATTGTGCTTGCACGGTGGAATTGTTGTAATCTGGTACCGGTAGAGCTTGCTGTTCAGTAAAATAAAGTCCGTACCAAATTAGATCTCAACATCATCAGCACTTCAATCTCTTAATTATAACGACTTTCGGTCTATTTTATAGCACAACTAGAAGGAAATACTACTATGAAAATGAGAACTAAAATGTGATGATGAATGAGTTCACGGCTAATCATGGCAACCACTGTGATCCCGCTGTGATCTGAGATCTCTTCTATTCCTGGTTAAGAGAACTGATCTGATTATATCATACAAGTCACGGCCGACTAGAATTTCCAGCCAGAACAAGATGACCATATCTTACAAATAATCTCCTGTACTGAGCATCGAATAATAGCGCCTTTCCATACAGTGAAGAACGAGATTCATATCCTATTTCTTCGCGTAGGTTATCAACATTGAATTTTGTGGATTCATCTTAAAACCTTGGAGTGCTTGCATGGCTACTGTCGATTGTACCTCATCACCATACTCTACAAATGCAATACCTGGC TGGAGATGGCTAAGCCACCTTCAATGCGGTTAATGATCTTGTTCACTACGAAACGCACACTATCAGACGAAAACGGATGAAGATTTCGAAGATTACTCACCGTGCCGGCCGTTGATCTTGGACTTGCAGGAAGTTCTTCTGCAATTTCCGATAGTTGTTAGAGAAATCGAGACAGAGAGCTGCCATGGACGCGATCGAACACACCACCATCAACACCAATGGAATCAAAATGCACATCGCCTCCATAGGCACAGGCCCCGTCGTTCTTCTTCTCCACGGCTTCCCCGAGCTCTGGTACTCATGGCGCCACCAGCTTCTCTACCTTTCTTCCGTCGGATATCGGGCCATCGCGCCGGACCTCCGCGGGTATGGCGATACCGAGTCCCCGGAATCGCATACTTCCTACACTGTGCTCCATATCGTCGGCGATTTGGTTGGGGCTTTGGATGAGCTTGGGATTGAGAAGGTGTTTGTTGTAGGGCACGATTGGGGGGCGATCATCGCGTGGTACTTTTGCCTGTTTAGACCTGATAGAATCAAGGCGTTGGTGAATCTGAGCGTCCAGTTCATACCTAGGAACCCTGCAATTCCTTTTGTTGAGGGTTTCAGATCTGCGTTTGGTGATGACTTCTACATTTGCAGGTTTCAGGTTCCAGGAGAGGCTGAAGAAGATTTTGCCTCCATTGACACAGCTGAGTTATTCAAGAAATTTCTCTGTAGTAGAAGATCAGATCCTCCAAAACTGCCCAAAGGGGTTGGAGTTCGTTCTATCCCATCCCCAGAAAACCTTCCTTCTTGGCTGACAGAAAAAGATATCAACTATTTTGCTACCACTTTCAAGCGGACAGGCTTTACTGGAGGATTGAACTACTACAGAGCCTTCGACCTAACTTGGGAGCTGACTGCATCATGGACAAAGGCACAGGTTCGAGTGCCGGTGAAGTTCATCATCGGGGATTTGGATCTGACCTACCAGTTTCCAGGAGCCAAGGAATATATCCACAATGGGGGATTCAAGAAGGATGTGCCGTTTCTGGAGGAAGTGATAGTAATGAAAGATACTGCTCACTTCATCAACCAAGAAAGGCCACATGAAATCAGTACTCACATCCATGACTTTATCAAGAAATTTTGAACTCCATCCATTCTCCATTGCTTGAATTGTTCTTTCTTTTTTCAGTGACTTTGAGTAAAGGATAATTTTCATCACACCCGTTTGCAGAGTGTAGTTTCTAATTATAAATAAAGGCTATAAGGTCGTAGGTTGTGACGTTCATCGAGGATCAACTATATGGGTTTCGTTGAAGAATAGGAAAAGATGACTACTAAATTTTGAACTTTTCTCTTATATACGACACCATCTAATGCCCTCTCCAATGAGACTGGCCACTTGAGGATGTGTTGAATTCAAGTCAATCATGTGTGTTGATTTCTTTAAGGTTTAACTTCAAAATGAGTCCCAACCATCTTTGAACCTTCTCATCCATCTTCCGAACTATGTGAACTTACGAGTTCATGTCAAAGCTTATCGGGAGCAATATCACAAGATACTTCCATTTAATTACGATAAAAGGCCTACATCCAAGTTTCATAAGCTTTGGGTCCACTATTTTGATCGTCATTTTCCTACTCCCAACAGAAGCCATCAGAAACTCAAGGGTCGCCGAACCCTATACAAGGGCCAATCTAATCTCACATATCTAATCATTTTTCACAGTTATTTTGATTCATATGCTTAAATAAATGTTTTGTTCATACAAACTTTTTTTTTCTTCCAGCCAACTCTCATTCTCCAATATAACAAATACAAAATCTACAATATCAACCATACTCGAACTCGCTATGTCGTAAAAGTAAAATTCTGCTACACCTAAGGCTCGAGTAATCTACATACTAGACAAAATTCAGTTCAAGAATTAAGCTGTACTTACTGGATTTCTCCCTCAACACTTCAGCAGCAGCTCATTGTGCTTGCACGGTGGAATTGTTGTAATCTGGTACCGGTAGAGCTTGCTGTTCAGTAAAATAAAGTCCGTACCAAATTAGATCTCAACATCATCAGCACTTCAATCTCTTAATTATAACGACTTTCGGTCTATTTTATAGCACAACTAGAAGGAAATACTACTATGAAAATGAGAACTAAAATGTGATGATGAATGAGTTCACGGCTAATCATGGCAACCACTGTGATCCCGCTGTGATCTGAGATCTCTTCTATTCCTGGTTAAGAGAACTGATCTGATTATATCATACAAGTCACGGCCGACTAGAATTTCCAGCCAGAACAAGATGACCATATCTTACAAATAATCTCCTGTACTGAGCATCGAATAATAGCGCCTTTCCATACAGTGAAGAACGAGATTCATATCCTATTTCTTCGCGTAGGTTATCAACATTGAATTTTGTGGATTCATCTTAAAACCTTGGAGTGCTTGCATGGCTACTGTCGATTGTACCTCATCACCATACTCTACAAATGCAATACCTGGC ATGGACGCGATCGAACACACCACCATCAACACCAATGGAATCAAAATGCACATCGCCTCCATAGGCACAGGCCCCGTCGTTCTTCTTCTCCACGGCTTCCCCGAGCTCTGGTACTCATGGCGCCACCAGCTTCTCTACCTTTCTTCCGTCGGATATCGGGCCATCGCGCCGGACCTCCGCGGGTATGGCGATACCGAGTCCCCGGAATCGCATACTTCCTACACTGTGCTCCATATCGTCGGCGATTTGGTTGGGGCTTTGGATGAGCTTGGGATTGAGAAGGTGTTTGTTGTAGGGCACGATTGGGGGGCGATCATCGCGTGGTACTTTTGCCTGTTTAGACCTGATAGAATCAAGGCGTTGGTGAATCTGAGCGTCCAGTTCATACCTAGGAACCCTGCAATTCCTTTTGTTGAGGGTTTCAGATCTGCGTTTGGTGATGACTTCTACATTTGCAGGTTTCAGGTTCCAGGAGAGGCTGAAGAAGATTTTGCCTCCATTGACACAGCTGAGTTATTCAAGAAATTTCTCTGTAGTAGAAGATCAGATCCTCCAAAACTGCCCAAAGGGGTTGGAGTTCGTTCTATCCCATCCCCAGAAAACCTTCCTTCTTGGCTGACAGAAAAAGATATCAACTATTTTGCTACCACTTTCAAGCGGACAGGCTTTACTGGAGGATTGAACTACTACAGAGCCTTCGACCTAACTTGGGAGCTGACTGCATCATGGACAAAGGCACAGGTTCGAGTGCCGGTGAAGTTCATCATCGGGGATTTGGATCTGACCTACCAGTTTCCAGGAGCCAAGGAATATATCCACAATGGGGGATTCAAGAAGGATGTGCCGTTTCTGGAGGAAGTGATAGTAATGAAAGATACTGCTCACTTCATCAACCAAGAAAGGCCACATGAAATCAGTACTCACATCCATGACTTTATCAAGAAATTTTGA MDAIEHTTINTNGIKMHIASIGTGPVVLLLHGFPELWYSWRHQLLYLSSVGYRAIAPDLRGYGDTESPESHTSYTVLHIVGDLVGALDELGIEKVFVVGHDWGAIIAWYFCLFRPDRIKALVNLSVQFIPRNPAIPFVEGFRSAFGDDFYICRFQVPGEAEEDFASIDTAELFKKFLCSRRSDPPKLPKGVGVRSIPSPENLPSWLTEKDINYFATTFKRTGFTGGLNYYRAFDLTWELTASWTKAQVRVPVKFIIGDLDLTYQFPGAKEYIHNGGFKKDVPFLEEVIVMKDTAHFINQERPHEISTHIHDFIKKF
BLAST of Carg11138-RA vs. NCBI nr
Match: XP_022934345.1 (uncharacterized protein LOC111441538 [Cucurbita moschata]) HSP 1 Score: 667.5 bits (1721), Expect = 2.2e-188 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0
BLAST of Carg11138-RA vs. NCBI nr
Match: XP_023528763.1 (uncharacterized protein LOC111791601 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 661.8 bits (1706), Expect = 1.2e-186 Identity = 312/316 (98.73%), Postives = 314/316 (99.37%), Query Frame = 0
BLAST of Carg11138-RA vs. NCBI nr
Match: XP_022984060.1 (uncharacterized protein LOC111482484 [Cucurbita maxima]) HSP 1 Score: 654.8 bits (1688), Expect = 1.5e-184 Identity = 308/316 (97.47%), Postives = 313/316 (99.05%), Query Frame = 0
BLAST of Carg11138-RA vs. NCBI nr
Match: XP_004152245.1 (PREDICTED: bifunctional epoxide hydrolase 2-like [Cucumis sativus] >KGN52816.1 hypothetical protein Csa_4G001830 [Cucumis sativus]) HSP 1 Score: 597.4 bits (1539), Expect = 2.8e-167 Identity = 273/316 (86.39%), Postives = 293/316 (92.72%), Query Frame = 0
BLAST of Carg11138-RA vs. NCBI nr
Match: XP_008454330.1 (PREDICTED: bifunctional epoxide hydrolase 2-like [Cucumis melo]) HSP 1 Score: 594.3 bits (1531), Expect = 2.3e-166 Identity = 274/316 (86.71%), Postives = 291/316 (92.09%), Query Frame = 0
BLAST of Carg11138-RA vs. TAIR10
Match: AT4G02340.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 472.2 bits (1214), Expect = 2.4e-133 Identity = 201/316 (63.61%), Postives = 256/316 (81.01%), Query Frame = 0
BLAST of Carg11138-RA vs. TAIR10
Match: AT3G05600.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-110 Identity = 180/323 (55.73%), Postives = 234/323 (72.45%), Query Frame = 0
BLAST of Carg11138-RA vs. TAIR10
Match: AT4G15960.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 381.3 bits (978), Expect = 5.7e-106 Identity = 175/324 (54.01%), Postives = 226/324 (69.75%), Query Frame = 0
BLAST of Carg11138-RA vs. TAIR10
Match: AT2G26740.1 (soluble epoxide hydrolase) HSP 1 Score: 357.1 bits (915), Expect = 1.1e-98 Identity = 174/325 (53.54%), Postives = 223/325 (68.62%), Query Frame = 0
BLAST of Carg11138-RA vs. TAIR10
Match: AT4G15955.3 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 352.4 bits (903), Expect = 2.8e-97 Identity = 173/323 (53.56%), Postives = 219/323 (67.80%), Query Frame = 0
BLAST of Carg11138-RA vs. Swiss-Prot
Match: sp|I6YGS0|EPHA_MYCTU (Epoxide hydrolase A OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ephA PE=1 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.2e-57 Identity = 120/329 (36.47%), Postives = 182/329 (55.32%), Query Frame = 0
BLAST of Carg11138-RA vs. Swiss-Prot
Match: sp|P95276|EPHB_MYCTO (Epoxide hydrolase B OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1988 PE=1 SV=2) HSP 1 Score: 180.6 bits (457), Expect = 2.6e-44 Identity = 112/352 (31.82%), Postives = 165/352 (46.88%), Query Frame = 0
BLAST of Carg11138-RA vs. Swiss-Prot
Match: sp|I6YC03|EPHB_MYCTU (Epoxide hydrolase B OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ephB PE=1 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 2.6e-44 Identity = 112/352 (31.82%), Postives = 165/352 (46.88%), Query Frame = 0
BLAST of Carg11138-RA vs. Swiss-Prot
Match: sp|P34913|HYES_HUMAN (Bifunctional epoxide hydrolase 2 OS=Homo sapiens OX=9606 GN=EPHX2 PE=1 SV=2) HSP 1 Score: 180.3 bits (456), Expect = 3.5e-44 Identity = 92/300 (30.67%), Postives = 161/300 (53.67%), Query Frame = 0
BLAST of Carg11138-RA vs. Swiss-Prot
Match: sp|P34914|HYES_MOUSE (Bifunctional epoxide hydrolase 2 OS=Mus musculus OX=10090 GN=Ephx2 PE=1 SV=2) HSP 1 Score: 180.3 bits (456), Expect = 3.5e-44 Identity = 97/303 (32.01%), Postives = 161/303 (53.14%), Query Frame = 0
BLAST of Carg11138-RA vs. TrEMBL
Match: tr|A0A0A0KY86|A0A0A0KY86_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001830 PE=4 SV=1) HSP 1 Score: 597.4 bits (1539), Expect = 1.8e-167 Identity = 273/316 (86.39%), Postives = 293/316 (92.72%), Query Frame = 0
BLAST of Carg11138-RA vs. TrEMBL
Match: tr|A0A1S3BXV2|A0A1S3BXV2_CUCME (bifunctional epoxide hydrolase 2-like OS=Cucumis melo OX=3656 GN=LOC103494764 PE=4 SV=1) HSP 1 Score: 594.3 bits (1531), Expect = 1.6e-166 Identity = 274/316 (86.71%), Postives = 291/316 (92.09%), Query Frame = 0
BLAST of Carg11138-RA vs. TrEMBL
Match: tr|A0A0A0KT70|A0A0A0KT70_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001920 PE=4 SV=1) HSP 1 Score: 562.0 bits (1447), Expect = 8.5e-157 Identity = 254/316 (80.38%), Postives = 286/316 (90.51%), Query Frame = 0
BLAST of Carg11138-RA vs. TrEMBL
Match: tr|A0A1S3BZJ8|A0A1S3BZJ8_CUCME (bifunctional epoxide hydrolase 2-like OS=Cucumis melo OX=3656 GN=LOC103494757 PE=4 SV=1) HSP 1 Score: 557.8 bits (1436), Expect = 1.6e-155 Identity = 253/316 (80.06%), Postives = 283/316 (89.56%), Query Frame = 0
BLAST of Carg11138-RA vs. TrEMBL
Match: tr|D8L7V8|D8L7V8_PRUPE (Epoxide hydrolase 2 OS=Prunus persica OX=3760 GN=eh2 PE=2 SV=1) HSP 1 Score: 500.0 bits (1286), Expect = 4.0e-138 Identity = 222/316 (70.25%), Postives = 265/316 (83.86%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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