Carg10596-RA (mRNA) Silver-seed gourd

NameCarg10596-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_031 : 144640 .. 146311 (-)
Sequence length312
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTTGATTGCTTGGCAATGGCGTCGCACAGGCGGCTGAAAAGCCCTCTGCCACCGCCCACTCGTGCGCACTTGACGCAAATTCAAAAGCCCTTTGTAATGTATTTTGGCTCTCTCTGTTTGTGCATATTTTTCTGTTTCTTTCTGTAAATGCCTTTTTCTATGATTGCTGAAAAGACTAAGTAAGAAGGCTTTTCGTGTGGGACTACTGATTACTGGGCTGTGATATGATCATGTGGGGTTCTTTATATTCTACGAAGATCATCATCTTCATCATTATCATCATCATCATCATTCTCTGGATTTTTTTTTTTATGGTTCAGTTAGAGTTGGAAGGGTCAAAGTTGATTAGAGTTTTCATTAGGCTTTTGAATTATTGTTATCTCTTTTGTATTATGGTACTTTTGGATTTTGCGGATACTTTTTCTTCTTTCTGTGTGAATTATGTGGCTATGGTTTTGTTGGACTCACTTGCAGAAACCCATTCCATTATGTCCCCACTCATCAATCTGATTCAAGCTCTTTTTCCAAAAATCCCGAAATTTGTTTCAGATCAGTCTCTTTTCTCGTGGGATTGGCCCGGCTCTGAATTAAAGCTCTACTAAACCTTTTCCTTTTCCATTGTGAATTTCTCATGAAGCTTCAGTTTCCCCTTTTCAGATCACTCACTGGAACTCATAATATTAAGAGTAAGATGATCATGACGGTGGTGATGAGAGAGAGAAAGAGAGGATTCAAACCCATATGAAGTTATGACGATCTATCAAAGAAAAAAGAACGAATAGATCTTGTAGGATTCTCAAGGTAGTAGTGTTCGCTCACTCCCATGTAGTAGTGTTCGAGTTTAAATCTTTGAGTTCAAGAAGGATTTGTTCCTGACGTACCCTAGGAACCTTTCCTCTCCCTAGCCATTTGCTTGCCACGGAAATGGCTCATTCTTCTTCTTTTTATATCCTTTCAATGCGTCGTCATGTCAATTCTAGGACATGTTTGGATATGGAAATGCCAATTTCTAGCCTCAACTTTATGAGAGTTTTTGAACTTTGTTCTCAATTGAGTTTCTAAAATATTAGCTATTGTTTAAGTTGATTAAAGAGTTAAACCTATCTATCATACGGTTGTTCTCAAAAGCCCAAATCTTTTTTTTGTGCTCTGTTCTGTTCTTCCACATTTATTGATTCTGAAAGTGAAACAGTAAAAGGGTTCATTCATTCTTTGTATTAGAACACATGAAGATCAAACTCTATGTGCGAGCCAAGGAGGGTTTTCGAAATCTTATAATCCACAAAAGAAAAGGTATGTAGCAGAACAATTAGGCATTGGCATTTTACATTAAATACAAACTTCATTTCACCTCCCTCCCTCCCCCCTGATATTGTACAAGAATCTGAATTTGCAAGCAGTAAAGATTTAGCATTTATATCAGCTTTTGACATTGGTGTTATCTTCTTTAGCAATGGAGTTCTTACAGTGAGCAATGGCAGCTTGAATTGCAGACTGCAATTCCTCCATGGTGCTATCACTAGTAGAAGAAGACATAGATGGAGTTGCGACGAGAAGGCCGCTATTTGTGGGGGATGTCCTCATGGATGCTGGAGCTGAGACTTCTCCTCTTTTTCCTCTCAATTCTTGCTTATTTCGTGGATTCAAATTACCCGAAAACGAATAA

mRNA sequence

ATGGATCTTGATTGCTTGGCAATGGCGTCGCACAGGCGGCTGAAAAGCCCTCTGCCACCGCCCACTCAACACATGAAGATCAAACTCTATGTGCGAGCCAAGGAGGGTTTTCGAAATCTTATAATCCACAAAAGAAAAGACTGCAATTCCTCCATGGTGCTATCACTAGTAGAAGAAGACATAGATGGAGTTGCGACGAGAAGGCCGCTATTTGTGGGGGATGTCCTCATGGATGCTGGAGCTGAGACTTCTCCTCTTTTTCCTCTCAATTCTTGCTTATTTCGTGGATTCAAATTACCCGAAAACGAATAA

Coding sequence (CDS)

ATGGATCTTGATTGCTTGGCAATGGCGTCGCACAGGCGGCTGAAAAGCCCTCTGCCACCGCCCACTCAACACATGAAGATCAAACTCTATGTGCGAGCCAAGGAGGGTTTTCGAAATCTTATAATCCACAAAAGAAAAGACTGCAATTCCTCCATGGTGCTATCACTAGTAGAAGAAGACATAGATGGAGTTGCGACGAGAAGGCCGCTATTTGTGGGGGATGTCCTCATGGATGCTGGAGCTGAGACTTCTCCTCTTTTTCCTCTCAATTCTTGCTTATTTCGTGGATTCAAATTACCCGAAAACGAATAA

Protein sequence

MDLDCLAMASHRRLKSPLPPPTQHMKIKLYVRAKEGFRNLIIHKRKDCNSSMVLSLVEEDIDGVATRRPLFVGDVLMDAGAETSPLFPLNSCLFRGFKLPENE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg10596Carg10596gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg10596-RACarg10596-RA-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg10596-RA.CDS.3Carg10596-RA.CDS.3CDS
Carg10596-RA.CDS.2Carg10596-RA.CDS.2CDS
Carg10596-RA.CDS.1Carg10596-RA.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg10596-RA.exon.3Carg10596-RA.exon.3exon
Carg10596-RA.exon.2Carg10596-RA.exon.2exon
Carg10596-RA.exon.1Carg10596-RA.exon.1exon