Carg10516-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10516-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	alpha-ketoglutarate-dependent dioxygenase alkB homolog 6
Location	Cucurbita_argyrosperma_scaffold_098 : 577663 .. 580544 (-)
Sequence length	1245

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGAAATACAACTGCGGTTATCATTAGGGTTTTGATCTTCGATTCATCATTCCAAGAGACGGACCGGAAGAGTTCGTCCACCTCCCATCGGTTCTCCCTGGCTTGCTGTTTGCGCAATAATCTCCACCTATCTGTTCTTCGGCTGCTAAATCCTTCTGGAAATCGAGATTTTAAACCAGAGATATGGAATCAGCGGAGGGGCTTAATCACTTCAAAGTTGGGCTTCTTCCAACAGTGTTCTATATTCCCGACTTCATAAGCGACGAAGATGAGACTATGATTCTGGATAATGTGCCAAATTTTACTATTGCTTTTCGTTCTTTGCCCTTTTTTCGCCCTGTAATTGTTCGCTAAACTAGGTAAGTTTCATTTGTAGATTTATAAAGCGCCTGCATCAAAATGGAAATCCTTGAAGAACAGGAGGCTGCAAAATTGGGGTTTGTTGAATAGCGATCTCATGTATTTTTGCTCATTTTTCGGAGTTCTGAATCTTTGAAAGATTTGTAAGATTGCTTTCCTTATCCATTGATTTCTTGCAGGTGGCGTTGTGCATGAAAAAGGTCTTCTTCCTCAAGAATGTAAGTAAAGAAAGAACTATATTTAAATGTTCTTAGTTAAGCTTAAACTTGATTGCCATATATCAGCTAAAATTAATGCATGGAGATAGACTTCTTATTGACTTGATTACAGAATTCTAGCATGCTCTATTCATAATAAACTTTCTATATTCAAGGTAATAGTACATTTTGTTCCCTGTTCTGTGCAATTTTTTCTTGAACGTTTAAAAATTGAAGACAACCAATGGGAGAAATTTGGTTCATGAGAAATTAACTTCAAATTGGTAGTATAAGGCAACTTATAGGATAGGTGAACACAATGTGGAGGTTTGGAATGCAGCAAATTTCATTTTTGTCTTCCTGTTGGCTGTACTACCAAATTTAACTTTTGCTTTTGATTACGTTGGGGAATTAATACTTTTGGTTAGACTAGTTTAATTCAACCGCCTCGTGGGAACGATAGAAAACAGCTGGAAAGACTTATACTGTGAGATTCCACATTGGTTGGAGACGGGAATGACCATTCCTTATAAGGGTGTGGAAACCCCTTCTTAGTAGATGCGTTTTAAAATCGTGAGTCCGACGACGATACGTAACAGGTTAAAACGGACAATATTTGCTAGCAGTGGGTTTGAGTTTTTACAAATGGTATCAGAGCCAAACACTGAGCGGTGTGTCAACGAGGACGTTAGGCCCCCAAGAGGGGTGGATTGTGAGATCCCATATCGGTTGGAGACGGGAACGAACCATTCCTTATAAGAGTGTAGAAACCTCTCCCTAGCAGACGCATTTTAGAATCGATAGCGATACGTAACGAGCGAAAGCAGACAATATCTGATAACGGTGGGCTTGGGCTGTTACATATTCTGCCATCAAGCTTGCAATTGGATATTAGTGCGGGTTTATGAACTTGAAGAGAATCTGTTCTACAGCTTTTATAATGGTGTCCTTTGAGCTCTAAAGTTTTGATATTAGCACGGTTTTCTTACTCATCTACGTTGGGTAGTCCATATTTTCATGTCCCTTATGCAAAAACTTGGATATTTCACATTCTTCTACGACGATTGCTTAAGTAGGACAAACAAGCATCCATATCATTTATCATAGTACACAGTACACCACTTGAATCAGTTAAATTGACAAATCTCTGTCTTTTGATGTTCTGCAGTGCCTATATGGCTGACGAATATTACCAAGAAGATCTGTCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCGTCCTAATCAAGGCATAATGGTACGAACTGACGTTTACCTGTTCTTACTGCAGTTCTTGTTTGAATTATAATTATGTTCTTGCCATGATCCTCGTCATAGAACTAATCTAGTGTTGTACTTTACCAATTAGCAACATCTTAGAAACAGTTTTTGGTTCTTGTGTAGCCACACCAAGATGGGCCTGCTTACTTTCCTGTAGTAACAATTCTATCTCTCGGTTCGCCTGTTGTTATGGACTTCACTCCCCATTTGAGGTTGAAATCATGTCCAGACCAGTTGACAGAAAACGCCGACGACAAAGATTCTAATGGAGCTTCTGATGTCGAGACTCACCGCCCTTTCTCTATCCTTCTAATGCCTCGTAGTTTGCTCGTTTTTAAGGATGAAGCTTATTCAGGTAGATCTTGCCCTGGATTTTGTCTTTTAACCTTCCCAGTTTACTTGATTTTATCTTCTAATGCCTCGTAGGTTACTTGCATGGTATCAGTGACAATAGTCTTCAATGTTATGAACAGGTATGATAACAACTAAATGTAGCTTTTGCAGAATCTAATTGGTTCTTGATATTGATTTCATCATTGCAAGTTTGTTTTTCATTTCTTTGCTTTCTCAGGCAGTGAACAAAATTGAAGTTCGTAACTGTCTATTAGAAACTGAAAATCCAACCGTTGAAGTGAACTGCAATCATAGTTCTTTCGAGAGAACGAATAATCGGCTTTCGTTGACATGTCGACTCGTACCAAAGGTTCACAAGCATTTGTTCAGGCGTTGAACGGCTCTTGAAGAAACTTTTGGTTTGTACAATATCACAAGTTTTAAATAATTTATATGGCTATCCTAGGTTCGTTAACTATTGGTTTATGATTTTATAGTTTAATAATACGAGGTAAAGGATTCAAATTTTTGATGTCAGTATGTGTTTATAAGTTGAGTTATAACGGTTGAAAATTACAATGCAAAATTGACCGTCAATGAAATATGACATTTATGAATTATCGTCACCATTGCCTCTACCTAAACTTGGACTAGCTAAACGTAAGTGAAATTTAAAACGTTGTAATT

mRNA sequence

TTTGAAATACAACTGCGGTTATCATTAGGGTTTTGATCTTCGATTCATCATTCCAAGAGACGGACCGGAAGAGTTCGTCCACCTCCCATCGGTTCTCCCTGGCTTGCTGTTTGCGCAATAATCTCCACCTATCTGTTCTTCGGCTGCTAAATCCTTCTGGAAATCGAGATTTTAAACCAGAGATATGGAATCAGCGGAGGGGCTTAATCACTTCAAAGTTGGGCTTCTTCCAACAGTGTTCTATATTCCCGACTTCATAAGCGACGAAGATGAGACTATGATTCTGGATAATATTTATAAAGCGCCTGCATCAAAATGGAAATCCTTGAAGAACAGGAGGCTGCAAAATTGGGGTGGCGTTGTGCATGAAAAAGGTCTTCTTCCTCAAGAATTGCCTATATGGCTGACGAATATTACCAAGAAGATCTGTCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCGTCCTAATCAAGGCATAATGGTACGAACTGACCCACACCAAGATGGGCCTGCTTACTTTCCTGTAGTAACAATTCTATCTCTCGGTTCGCCTGTTGTTATGGACTTCACTCCCCATTTGAGGTTGAAATCATGTCCAGACCAGTTGACAGAAAACGCCGACGACAAAGATTCTAATGGAGCTTCTGATGTCGAGACTCACCGCCCTTTCTCTATCCTTCTAATGCCTCGTAGTTTGCTCGTTTTTAAGGATGAAGCTTATTCAGGTTACTTGCATGGTATCAGTGACAATAGTCTTCAATGTTATGAACAGGCAGTGAACAAAATTGAAGTTCGTAACTGTCTATTAGAAACTGAAAATCCAACCGTTGAAGTGAACTGCAATCATAGTTCTTTCGAGAGAACGAATAATCGGCTTTCGTTGACATGTCGACTCGTACCAAAGGTTCACAAGCATTTGTTCAGGCGTTGAACGGCTCTTGAAGAAACTTTTGGTTTGTACAATATCACAAGTTTTAAATAATTTATATGGCTATCCTAGGTTCGTTAACTATTGGTTTATGATTTTATAGTTTAATAATACGAGGTAAAGGATTCAAATTTTTGATGTCAGTATGTGTTTATAAGTTGAGTTATAACGGTTGAAAATTACAATGCAAAATTGACCGTCAATGAAATATGACATTTATGAATTATCGTCACCATTGCCTCTACCTAAACTTGGACTAGCTAAACGTAAGTGAAATTTAAAACGTTGTAATT

Coding sequence (CDS)

ATGGAATCAGCGGAGGGGCTTAATCACTTCAAAGTTGGGCTTCTTCCAACAGTGTTCTATATTCCCGACTTCATAAGCGACGAAGATGAGACTATGATTCTGGATAATATTTATAAAGCGCCTGCATCAAAATGGAAATCCTTGAAGAACAGGAGGCTGCAAAATTGGGGTGGCGTTGTGCATGAAAAAGGTCTTCTTCCTCAAGAATTGCCTATATGGCTGACGAATATTACCAAGAAGATCTGTCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCGTCCTAATCAAGGCATAATGGTACGAACTGACCCACACCAAGATGGGCCTGCTTACTTTCCTGTAGTAACAATTCTATCTCTCGGTTCGCCTGTTGTTATGGACTTCACTCCCCATTTGAGGTTGAAATCATGTCCAGACCAGTTGACAGAAAACGCCGACGACAAAGATTCTAATGGAGCTTCTGATGTCGAGACTCACCGCCCTTTCTCTATCCTTCTAATGCCTCGTAGTTTGCTCGTTTTTAAGGATGAAGCTTATTCAGGTTACTTGCATGGTATCAGTGACAATAGTCTTCAATGTTATGAACAGGCAGTGAACAAAATTGAAGTTCGTAACTGTCTATTAGAAACTGAAAATCCAACCGTTGAAGTGAACTGCAATCATAGTTCTTTCGAGAGAACGAATAATCGGCTTTCGTTGACATGTCGACTCGTACCAAAGGTTCACAAGCATTTGTTCAGGCGTTGA

Protein sequence

MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVHEKGLLPQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYFPVVTILSLGSPVVMDFTPHLRLKSCPDQLTENADDKDSNGASDVETHRPFSILLMPRSLLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLSLTCRLVPKVHKHLFRR

Homology

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BLAST of Carg10516-RA vs. NCBI nr
Match: XP_022925559.1 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucurbita moschata])

HSP 1 Score: 514.6 bits (1324), Expect = 1.9e-142
Identity = 249/256 (97.27%), Postives = 250/256 (97.66%), Query Frame = 0


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV
Sbjct: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60

Query: 61  HEKGLLPQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYF 120
           HEKGLLPQELPIWLTNITKKI QETNLYPAPINHVLINEYRPNQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTENADDKDSNGASDVETHRPFSILLMPRSLL 180
           PVVTILSLGSPVVMDFTPHLRLKSCPDQLTE+ DDKDSNGASDVETHRPFSILLMPRSLL
Sbjct: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTESFDDKDSNGASDVETHRPFSILLMPRSLL 180

Query: 181 VFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLS 240
           VFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLS
Sbjct: 181 VFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLS 240

Query: 241 LTCRLVPKVHKHLFRR 257
           LTCRLVPKVHKHLFRR
Sbjct: 241 LTCRLVPKVHKHLFRR 252

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BLAST of Carg10516-RA vs. NCBI nr
Match: XP_023543264.1 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 512.7 bits (1319), Expect = 7.3e-142
Identity = 247/256 (96.48%), Postives = 249/256 (97.27%), Query Frame = 0


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV
Sbjct: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60

Query: 61  HEKGLLPQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYF 120
           HEKGLLPQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTENADDKDSNGASDVETHRPFSILLMPRSLL 180
           PVVTILSLGSPVVMDFTPH RLKSCPDQLTE+ DDKDSNGASDVETHRPFSILLMPRSLL
Sbjct: 121 PVVTILSLGSPVVMDFTPHSRLKSCPDQLTESFDDKDSNGASDVETHRPFSILLMPRSLL 180

Query: 181 VFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLS 240
           VFKDEAYSGYLHGISDNSLQCYEQAVNK EVRNCLL+TENPTVEVNCNHSSFERTNNRLS
Sbjct: 181 VFKDEAYSGYLHGISDNSLQCYEQAVNKSEVRNCLLKTENPTVEVNCNHSSFERTNNRLS 240

Query: 241 LTCRLVPKVHKHLFRR 257
           LTCRLVPKVHKHLFRR
Sbjct: 241 LTCRLVPKVHKHLFRR 252

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BLAST of Carg10516-RA vs. NCBI nr
Match: XP_022978982.1 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucurbita maxima])

HSP 1 Score: 503.4 bits (1295), Expect = 4.4e-139
Identity = 244/256 (95.31%), Postives = 246/256 (96.09%), Query Frame = 0


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILD+IYKAPASKWKSLKNRRLQNWGGVV
Sbjct: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDDIYKAPASKWKSLKNRRLQNWGGVV 60

Query: 61  HEKGLLPQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYF 120
           HEKGLLPQELPIWLTNITKKI QETNLYPAPINHVLINEYRPNQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTENADDKDSNGASDVETHRPFSILLMPRSLL 180
           PVVTILSLGSPVVMDFTPH RLKSCPDQLTE+ DD DSNGASDVETH PFSILLMPRSLL
Sbjct: 121 PVVTILSLGSPVVMDFTPHSRLKSCPDQLTESFDDNDSNGASDVETHCPFSILLMPRSLL 180

Query: 181 VFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLS 240
           VFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHS FERTNNRLS
Sbjct: 181 VFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSCFERTNNRLS 240

Query: 241 LTCRLVPKVHKHLFRR 257
           LTCRLVPKVHKHLFRR
Sbjct: 241 LTCRLVPKVHKHLFRR 252

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BLAST of Carg10516-RA vs. NCBI nr
Match: XP_008462630.1 (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 [Cucumis melo] >XP_008462631.1 PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 [Cucumis melo])

HSP 1 Score: 437.2 bits (1123), Expect = 3.9e-119
Identity = 215/257 (83.66%), Postives = 228/257 (88.72%), Query Frame = 0


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           MES+EGLN FKVG LPTVFYIP+FIS + ET +LDNIYKAP SKWKSLKNRRLQNWGG+V
Sbjct: 1   MESSEGLNRFKVGHLPTVFYIPNFISHDHETALLDNIYKAPVSKWKSLKNRRLQNWGGIV 60

Query: 61  HEKGLLPQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYF 120
           HEKGLLPQ+LPIWLTNITKKI QETNLYPAPINHVLINEY  NQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQDLPIWLTNITKKISQETNLYPAPINHVLINEYLHNQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTENADDKDSNGASDVETHR--PFSILLMPRS 180
           PVV ILSLGSPVVMDFTPH RLKSC D+LTEN DDKDSNG     TH+  PFSILLMPRS
Sbjct: 121 PVVAILSLGSPVVMDFTPHSRLKSCADELTENIDDKDSNGT----THQPHPFSILLMPRS 180

Query: 181 LLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNR 240
           LL+FKDEAYSGYLHGISDNSLQCY QAVNK EV+NCLLETEN TV+VN +HSSFERTN R
Sbjct: 181 LLIFKDEAYSGYLHGISDNSLQCYGQAVNKTEVQNCLLETENATVKVNRDHSSFERTNTR 240

Query: 241 LSLTCRLVPKVHKHLFR 256
           +SLTCRLVPKVHKHLFR
Sbjct: 241 VSLTCRLVPKVHKHLFR 249

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BLAST of Carg10516-RA vs. NCBI nr
Match: XP_011657744.1 (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucumis sativus] >KGN48326.1 hypothetical protein Csa_6G476660 [Cucumis sativus])

HSP 1 Score: 426.0 bits (1094), Expect = 8.9e-116
Identity = 211/257 (82.10%), Postives = 226/257 (87.94%), Query Frame = 0


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           MES+EGLN  +VG LPTVFYIP+FIS + ET++LDNIYKAP SKWKSLKNRRLQNWGG+V
Sbjct: 1   MESSEGLNRHQVGHLPTVFYIPNFISPDHETVLLDNIYKAPVSKWKSLKNRRLQNWGGIV 60

Query: 61  HEKGLLPQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYF 120
           HEKGLLPQ+LPIWLTNITKKI QET+LYPAPINHVLINEY  +QGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQDLPIWLTNITKKIGQETSLYPAPINHVLINEYLLDQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTENADDKDSNGASDVETH--RPFSILLMPRS 180
           PVV ILSLGSPVVMDFTPH RLKSC DQLTE  DDKDSNG     TH   PFSILLMPRS
Sbjct: 121 PVVAILSLGSPVVMDFTPHSRLKSCADQLTEKVDDKDSNGT----THHPHPFSILLMPRS 180

Query: 181 LLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNR 240
           LL+FKDEAYSGYLHGISDNSLQ YEQAVNK EV+NCLLETEN TV+VN +HSSFERTN R
Sbjct: 181 LLIFKDEAYSGYLHGISDNSLQFYEQAVNKTEVQNCLLETENATVKVNRDHSSFERTNTR 240

Query: 241 LSLTCRLVPKVHKHLFR 256
           +SLTCRLVPKVHKHLFR
Sbjct: 241 VSLTCRLVPKVHKHLFR 249

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BLAST of Carg10516-RA vs. TAIR10
Match: AT4G20350.2 (oxidoreductases)

HSP 1 Score: 294.7 bits (753), Expect = 5.6e-80
Identity = 149/249 (59.84%), Postives = 179/249 (71.89%), Query Frame = 0


Query: 7   LNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVHEKGLL 66
           L  F+VGL PTVFYIP FI+DE++T +L++IY A  SKWK+LKNRRLQNWGG+VHEKGL+
Sbjct: 3   LERFRVGLTPTVFYIPGFITDEEQTQLLNHIYGASGSKWKTLKNRRLQNWGGMVHEKGLV 62

Query: 67  PQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYFPVVTIL 126
           PQELP WLT IT +I + + L+P+ INHVLINEY P+QGIM    PHQDGPAYFPVV IL
Sbjct: 63  PQELPPWLTKITAEIHESSGLFPSAINHVLINEYHPDQGIM----PHQDGPAYFPVVAIL 122

Query: 127 SLGSPVVMDFTPHLRLKSCPDQLTENADDKDSNGASDVETHRPFSILLMPRSLLVFKDEA 186
           SLGSPVVMDFTPHLRL+S    +++   D+     S       FS+LLMP+SLL+FKD+A
Sbjct: 123 SLGSPVVMDFTPHLRLRSGDGYISK---DQSPCAESCAPERDSFSVLLMPQSLLIFKDDA 182

Query: 187 YSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLSLTCRLV 246
           YS +LHGISD+  QCY Q VN+ E     L   N           F R   R+SLTCRLV
Sbjct: 183 YSDFLHGISDSPTQCYNQVVNEAEA----LAYSNEEDSRKDGDKIFHRDQTRVSLTCRLV 240

Query: 247 PKVHKHLFR 256
           PKV K+LFR
Sbjct: 243 PKVRKNLFR 240

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BLAST of Carg10516-RA vs. Swiss-Prot
Match: sp|Q5PQ59|ALKB6_XENLA (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Xenopus laevis OX=8355 GN=alkbh6 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 5.1e-38
Identity = 95/246 (38.62%), Postives = 130/246 (52.85%), Query Frame = 0


Query: 7   LNHFKVGLLP-TVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVHEKGL 66
           L+ F V  +P   +Y+P++IS  +E  +L  +Y AP  KW  L  R+LQNWGG+ H +G+
Sbjct: 10  LDSFLVEKIPLAAYYVPEYISKSEEEYLLRQVYNAPKPKWTQLSGRKLQNWGGLPHSRGM 69

Query: 67  LPQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYFPVVTI 126
           + ++LP WL   T +I           NHVL+NEY   +GIM    PH+DGP Y+P VT 
Sbjct: 70  VQEKLPSWLQKYTDQISSLGVFGDHSANHVLVNEYNAGEGIM----PHEDGPMYYPTVTT 129

Query: 127 LSLGSPVVMDFTPHLRLKSCPDQLTENADDKDSNGASDVETHRPFSILLMPRSLLVFKDE 186
           +SLGS  ++DF   +  K C  Q T+N D      AS  E     S+LL PRSLLV ++E
Sbjct: 130 ISLGSHTLLDFYVPIN-KEC--QETQNQD----KVASTEEQRHMLSLLLEPRSLLVVREE 189

Query: 187 AYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLSLTCRL 246
            Y+ YLHGI   +       V  +          N T        + +R   R+SLT R 
Sbjct: 190 LYTSYLHGICPRTSDTLSPMVANL---------GNSTAHAG---DTLQR-GTRVSLTIRF 231

Query: 247 VPKVHK 252
           VPKV K
Sbjct: 250 VPKVLK 231

[Close]

BLAST of Carg10516-RA vs. Swiss-Prot
Match: sp|Q3KRA9|ALKB6_HUMAN (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Homo sapiens OX=9606 GN=ALKBH6 PE=1 SV=2)

HSP 1 Score: 156.0 bits (393), Expect = 5.6e-37
Identity = 84/234 (35.90%), Postives = 119/234 (50.85%), Query Frame = 0


Query: 16  PTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVHEKGLLPQELPIWLT 75
           P ++Y+PDFIS E+E  +L  ++ AP  KW  L  R+LQNWGG+ H +G++P+ LP WL 
Sbjct: 21  PVIYYVPDFISKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQ 80

Query: 76  NITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYFPVVTILSLGSPVVMD 135
               K+   +     P NHVL+N+Y P +GIM    PH+DGP Y+P V+ +SLGS  V+D
Sbjct: 81  RYVDKVSNLSLFGGLPANHVLVNQYLPGEGIM----PHEDGPLYYPTVSTISLGSHTVLD 140

Query: 136 FTPHLRLKSCPDQLTENADDKDSNGASDVETHRPFSILLMPRSLLVFKDEAYSGYLHGIS 195
           F    R            +D D             S+LL PRSLLV +  AY+  LHGI 
Sbjct: 141 FYEPRR-----------PEDDDPTEQXXXXXXXTTSLLLEPRSLLVLRGPAYTRLLHGI- 200

Query: 196 DNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLSLTCRLVPKV 250
                    A  +++  +      N     +    +      R+SLT R VP+V
Sbjct: 201 ---------AAARVDALDAASSPPNAAACPSARPGACLVRGTRVSLTIRRVPRV 229

[Close]

BLAST of Carg10516-RA vs. Swiss-Prot
Match: sp|Q8K2U2|ALKB6_MOUSE (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Mus musculus OX=10090 GN=Alkbh6 PE=2 SV=3)

HSP 1 Score: 152.1 bits (383), Expect = 8.2e-36
Identity = 85/235 (36.17%), Postives = 120/235 (51.06%), Query Frame = 0


Query: 16  PTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVHEKGLLPQELPIWLT 75
           P ++Y+PDFIS E+E  +L  ++ AP  KW  L  R+LQNWGG+ H +G++P+ LP WL 
Sbjct: 21  PLIYYVPDFISKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQ 80

Query: 76  NITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYFPVVTILSLGSPVVMD 135
               K+   +     P NHVL+N+Y P +GIM    PH+DGP Y+P V+ +SLGS  V+D
Sbjct: 81  RYVDKVSDLSLFGGLPANHVLVNQYLPGEGIM----PHEDGPLYYPTVSTISLGSHTVLD 140

Query: 136 FTPHLRLKSCPDQLTENADDKDSNGASDVETHRPF-SILLMPRSLLVFKDEAYSGYLHGI 195
           F                  D D          RP  S+L+ PRSLLV +  AY+  LHGI
Sbjct: 141 F------------YEPRQPDDDVPMEQPRPPQRPITSLLVEPRSLLVLRGTAYTRLLHGI 200

Query: 196 SDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLSLTCRLVPKV 250
           S            +++  +      N T   +    +      R+SLT R VP+V
Sbjct: 201 S----------ATRVDELDATSLPPNATACKSALPGAHLVRGTRVSLTIRRVPRV 229

[Close]

BLAST of Carg10516-RA vs. Swiss-Prot
Match: sp|Q6IQE9|ALKB6_DANRE (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Danio rerio OX=7955 GN=alkbh6 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.4e-35
Identity = 84/234 (35.90%), Postives = 119/234 (50.85%), Query Frame = 0


Query: 16  PTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVHEKGLLPQELPIWLT 75
           PTV+YIPDFIS+ +E  +L  +Y+AP  KW  L  RRLQNWGG+ + KG+L ++LP WL 
Sbjct: 21  PTVYYIPDFISEAEEEFLLQQVYRAPKPKWTQLSGRRLQNWGGLPNPKGMLAEKLPDWLL 80

Query: 76  NITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYFPVVTILSLGSPVVMD 135
             T+KI           NHVL+NEY+P +GIM    PH+DGP Y P VT +++GS  ++D
Sbjct: 81  EYTEKISALGAFAGKTANHVLVNEYKPGEGIM----PHEDGPLYHPTVTTITVGSHTLLD 140

Query: 136 FTPHLRLKSCPDQLTENADDKDSNGASDVETHRPFSILLMPRSLLVFKDEAYSGYLHGIS 195
           F                    + +     E+    S+L+  +SLL+ +D+ Y  YLHGI 
Sbjct: 141 F-------------YRPVCQAEPDAPQTEESRYMLSLLVQRKSLLILQDDMYKCYLHGIR 200

Query: 196 DNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLSLTCRLVPKV 250
                   + V  I      +    P              + R+SLT R VPK+
Sbjct: 201 GVCEDVLSEHVVNISSTGAQVGDTLP-------------RSTRVSLTIRHVPKI 224

[Close]

BLAST of Carg10516-RA vs. TrEMBL
Match: tr|A0A1S3CHF4|A0A1S3CHF4_CUCME (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500943 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 2.6e-119
Identity = 215/257 (83.66%), Postives = 228/257 (88.72%), Query Frame = 0


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           MES+EGLN FKVG LPTVFYIP+FIS + ET +LDNIYKAP SKWKSLKNRRLQNWGG+V
Sbjct: 1   MESSEGLNRFKVGHLPTVFYIPNFISHDHETALLDNIYKAPVSKWKSLKNRRLQNWGGIV 60

Query: 61  HEKGLLPQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYF 120
           HEKGLLPQ+LPIWLTNITKKI QETNLYPAPINHVLINEY  NQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQDLPIWLTNITKKISQETNLYPAPINHVLINEYLHNQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTENADDKDSNGASDVETHR--PFSILLMPRS 180
           PVV ILSLGSPVVMDFTPH RLKSC D+LTEN DDKDSNG     TH+  PFSILLMPRS
Sbjct: 121 PVVAILSLGSPVVMDFTPHSRLKSCADELTENIDDKDSNGT----THQPHPFSILLMPRS 180

Query: 181 LLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNR 240
           LL+FKDEAYSGYLHGISDNSLQCY QAVNK EV+NCLLETEN TV+VN +HSSFERTN R
Sbjct: 181 LLIFKDEAYSGYLHGISDNSLQCYGQAVNKTEVQNCLLETENATVKVNRDHSSFERTNTR 240

Query: 241 LSLTCRLVPKVHKHLFR 256
           +SLTCRLVPKVHKHLFR
Sbjct: 241 VSLTCRLVPKVHKHLFR 249

[Close]

BLAST of Carg10516-RA vs. TrEMBL
Match: tr|A0A0A0KKP8|A0A0A0KKP8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G476660 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 5.9e-116
Identity = 211/257 (82.10%), Postives = 226/257 (87.94%), Query Frame = 0


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           MES+EGLN  +VG LPTVFYIP+FIS + ET++LDNIYKAP SKWKSLKNRRLQNWGG+V
Sbjct: 1   MESSEGLNRHQVGHLPTVFYIPNFISPDHETVLLDNIYKAPVSKWKSLKNRRLQNWGGIV 60

Query: 61  HEKGLLPQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYF 120
           HEKGLLPQ+LPIWLTNITKKI QET+LYPAPINHVLINEY  +QGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQDLPIWLTNITKKIGQETSLYPAPINHVLINEYLLDQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTENADDKDSNGASDVETH--RPFSILLMPRS 180
           PVV ILSLGSPVVMDFTPH RLKSC DQLTE  DDKDSNG     TH   PFSILLMPRS
Sbjct: 121 PVVAILSLGSPVVMDFTPHSRLKSCADQLTEKVDDKDSNGT----THHPHPFSILLMPRS 180

Query: 181 LLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNR 240
           LL+FKDEAYSGYLHGISDNSLQ YEQAVNK EV+NCLLETEN TV+VN +HSSFERTN R
Sbjct: 181 LLIFKDEAYSGYLHGISDNSLQFYEQAVNKTEVQNCLLETENATVKVNRDHSSFERTNTR 240

Query: 241 LSLTCRLVPKVHKHLFR 256
           +SLTCRLVPKVHKHLFR
Sbjct: 241 VSLTCRLVPKVHKHLFR 249

[Close]

BLAST of Carg10516-RA vs. TrEMBL
Match: tr|A0A1S3CHX3|A0A1S3CHX3_CUCME (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500943 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 1.9e-93
Identity = 172/206 (83.50%), Postives = 181/206 (87.86%), Query Frame = 0


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           MES+EGLN FKVG LPTVFYIP+FIS + ET +LDNIYKAP SKWKSLKNRRLQNWGG+V
Sbjct: 1   MESSEGLNRFKVGHLPTVFYIPNFISHDHETALLDNIYKAPVSKWKSLKNRRLQNWGGIV 60

Query: 61  HEKGLLPQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYF 120
           HEKGLLPQ+LPIWLTNITKKI QETNLYPAPINHVLINEY  NQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQDLPIWLTNITKKISQETNLYPAPINHVLINEYLHNQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTENADDKDSNGASDVETHR--PFSILLMPRS 180
           PVV ILSLGSPVVMDFTPH RLKSC D+LTEN DDKDSNG     TH+  PFSILLMPRS
Sbjct: 121 PVVAILSLGSPVVMDFTPHSRLKSCADELTENIDDKDSNGT----THQPHPFSILLMPRS 180

Query: 181 LLVFKDEAYSGYLHGISDNSLQCYEQ 205
           LL+FKDEAYSGYLHGISDNSLQCY Q
Sbjct: 181 LLIFKDEAYSGYLHGISDNSLQCYGQ 198

[Close]

BLAST of Carg10516-RA vs. TrEMBL
Match: tr|A0A1S2Z021|A0A1S2Z021_CICAR (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Cicer arietinum OX=3827 GN=LOC101501561 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.1e-85
Identity = 169/268 (63.06%), Postives = 200/268 (74.63%), Query Frame = 0


Query: 2   ESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVH 61
           ES + L +FKVG LPT+FYIPDFI+D  +T++L+NIY AP+SKWK LKNRRLQNWGGVVH
Sbjct: 4   ESKQKLTNFKVGSLPTLFYIPDFITDTHQTLLLNNIYGAPSSKWKLLKNRRLQNWGGVVH 63

Query: 62  EKGLLPQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYFP 121
           EKGLLPQ LP WLTN T+KI +E+ L+P+PINHVLINEY+PNQGIM    PHQDGP+YFP
Sbjct: 64  EKGLLPQTLPPWLTNFTQKISEESGLFPSPINHVLINEYQPNQGIM----PHQDGPSYFP 123

Query: 122 VVTILSLGSPVVMDFTPHLRLKSCPDQLTENADDKDSNG-----ASD--VETHRPFSILL 181
           VV ILSLGSPVVMDFTPH RLK          D KDSNG     A D  ++ HRPFSI+L
Sbjct: 124 VVAILSLGSPVVMDFTPHARLK---------LDSKDSNGEITEIAKDKWLDDHRPFSIIL 183

Query: 182 MPRSLLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEV------RNCLLETENPTVEVNC- 241
           MPRSLL+FKD+AYS YLHGI D ++  Y+ AVN+ EV         L  TE+    V   
Sbjct: 184 MPRSLLIFKDQAYSDYLHGIKDCAVHGYDGAVNETEVLKHNESDRHLFGTEDALETVGKE 243

Query: 242 NHSSFERTNNRLSLTCRLVPKVHKHLFR 256
            + +  RT+NR+SLTCRLVPKVHK+LFR
Sbjct: 244 EYKNISRTSNRISLTCRLVPKVHKNLFR 258

[Close]

BLAST of Carg10516-RA vs. TrEMBL
Match: tr|G7KMG1|G7KMG1_MEDTR (2OG-Fe(II) oxygenase family protein OS=Medicago truncatula OX=3880 GN=11439740 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 7.1e-85
Identity = 163/265 (61.51%), Postives = 201/265 (75.85%), Query Frame = 0


Query: 5   EGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVHEKG 64
           + L+ FKVG LPT+FYIPDFISD D+T++L+NIY AP+SKWK LKNRRLQNWGGVVHEKG
Sbjct: 9   QNLSDFKVGSLPTLFYIPDFISDTDQTLLLNNIYGAPSSKWKLLKNRRLQNWGGVVHEKG 68

Query: 65  LLPQELPIWLTNITKKICQETNLYPAPINHVLINEYRPNQGIMVRTDPHQDGPAYFPVVT 124
           LLPQ LP WLTN T+KI +E+ L+P+PINHVLINEY+PNQGIM    PHQDGP+YFPVV 
Sbjct: 69  LLPQPLPSWLTNFTQKISEESGLFPSPINHVLINEYQPNQGIM----PHQDGPSYFPVVA 128

Query: 125 ILSLGSPVVMDFTPHLRLKSCPDQLTENADDKDSNGASD-------VETHRPFSILLMPR 184
           ILSLGSPVVMDFTPH +LK    ++T    DK+S+G +        ++ HRPFS++LMPR
Sbjct: 129 ILSLGSPVVMDFTPHAKLKLDSQEVT----DKESDGETFEIGKDKWLDDHRPFSVILMPR 188

Query: 185 SLLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEV------RNCLLETENPTVEVNC-NHS 244
           SLL+FKD+AYS YLHGI D +L  Y+ AVN+IE          L  +E+    +    + 
Sbjct: 189 SLLIFKDKAYSDYLHGIKDCALHGYDGAVNEIEALKHNESDKHLFGSEDALEAIGKEEYK 248

Query: 245 SFERTNNRLSLTCRLVPKVHKHLFR 256
           +  RT+NR+SLTCRLVPKVHK+LFR
Sbjct: 249 NISRTSNRISLTCRLVPKVHKNLFR 265

The following BLAST results are available for this feature:

BLAST of Carg10516-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925559.1	1.9e-142	97.27	alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucurbita moschata]	[more]
XP_023543264.1	7.3e-142	96.48	alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucurbita pepo subsp. ...	[more]
XP_022978982.1	4.4e-139	95.31	alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucurbita maxima]	[more]
XP_008462630.1	3.9e-119	83.66	PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 [...	[more]
XP_011657744.1	8.9e-116	82.10	PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucumis sat...	[more]

BLAST of Carg10516-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G20350.2	5.6e-80	59.84	oxidoreductases	[more]

BLAST of Carg10516-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5PQ59\|ALKB6_XENLA	5.1e-38	38.62	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Xenopus laevis OX=83...	[more]
sp\|Q3KRA9\|ALKB6_HUMAN	5.6e-37	35.90	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Homo sapiens OX=9606...	[more]
sp\|Q8K2U2\|ALKB6_MOUSE	8.2e-36	36.17	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Mus musculus OX=1009...	[more]
sp\|Q6IQE9\|ALKB6_DANRE	1.4e-35	35.90	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Danio rerio OX=7955 ...	[more]

BLAST of Carg10516-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CHF4\|A0A1S3CHF4_CUCME	2.6e-119	83.66	alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 OS=Cucumis m...	[more]
tr\|A0A0A0KKP8\|A0A0A0KKP8_CUCSA	5.9e-116	82.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G476660 PE=4 SV=1	[more]
tr\|A0A1S3CHX3\|A0A1S3CHX3_CUCME	1.9e-93	83.50	alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2 OS=Cucumis m...	[more]
tr\|A0A1S2Z021\|A0A1S2Z021_CICAR	1.1e-85	63.06	alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Cicer arietinum OX=3...	[more]
tr\|G7KMG1\|G7KMG1_MEDTR	7.1e-85	61.51	2OG-Fe(II) oxygenase family protein OS=Medicago truncatula OX=3880 GN=11439740 P...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR005123	Oxoglu/Fe-dep_dioxygenase
IPR032862	ALKBH6
IPR037151	AlkB-like_sf
IPR027450	AlkB-like

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016491	oxidoreductase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg10516	Carg10516	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg10516-RA	Carg10516-RA-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10516-RA.three_prime_UTR.1	Carg10516-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10516-RA.CDS.7	Carg10516-RA.CDS.7	CDS
Carg10516-RA.CDS.6	Carg10516-RA.CDS.6	CDS
Carg10516-RA.CDS.5	Carg10516-RA.CDS.5	CDS
Carg10516-RA.CDS.4	Carg10516-RA.CDS.4	CDS
Carg10516-RA.CDS.3	Carg10516-RA.CDS.3	CDS
Carg10516-RA.CDS.2	Carg10516-RA.CDS.2	CDS
Carg10516-RA.CDS.1	Carg10516-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10516-RA.five_prime_UTR.1	Carg10516-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10516-RA.exon.7	Carg10516-RA.exon.7	exon
Carg10516-RA.exon.6	Carg10516-RA.exon.6	exon
Carg10516-RA.exon.5	Carg10516-RA.exon.5	exon
Carg10516-RA.exon.4	Carg10516-RA.exon.4	exon
Carg10516-RA.exon.3	Carg10516-RA.exon.3	exon
Carg10516-RA.exon.2	Carg10516-RA.exon.2	exon
Carg10516-RA.exon.1	Carg10516-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027450	Alpha-ketoglutarate-dependent dioxygenase AlkB-like	PFAM	PF13532	2OG-FeII_Oxy_2	coord: 52..244 e-value: 1.5E-10 score: 41.6
IPR037151	Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily	GENE3D	G3DSA:2.60.120.590		coord: 8..252 e-value: 8.0E-38 score: 131.9
IPR032862	Alpha-ketoglutarate-dependent dioxygenase alkB homologue 6	PANTHER	PTHR13069:SF11	ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6	coord: 3..252
None	No IPR available	PANTHER	PTHR13069	UNCHARACTERIZED	coord: 3..252
None	No IPR available	SUPERFAMILY	SSF51197	Clavaminate synthase-like	coord: 14..203 coord: 233..247
IPR005123	Oxoglutarate/iron-dependent dioxygenase	PROSITE	PS51471	FE2OG_OXY	coord: 91..247 score: 8.454