Carg10445-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10445-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Expansin
Location	Cucurbita_argyrosperma_scaffold_098 : 195007 .. 196140 (+)
Sequence length	804

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGAAGCCATCCTTCCCATCGACATGCCTGTTGGCATCTCTGCTAAGCCTGCTGTTGCTTATAATCGCCCATGCACACGCCGCGGCCTCGATGGGGCATCGCCCTTACGCGAAAGCGCACAGGGAATTAGGCGCGCGGCTTGTTAAAAAGCATAACAGGCCGCCGTTTAAGCCCGGACCCTTGGAAACGCGCTCGTGCTACCTTCTATGAAGGTGGCCCCGGAACCTTTGGTAAGCCTAATAATTTTATTTTTCCTTATAATTAAATGACATCTGGGTATTGTAGTAATTGTTGGATGATGAAAGTCTTTCCCTAATTTAGGATTCTCTCTATTAATATGAGATATTTTAAAAGATTCTCTATTAATATGAGATATTTTTAGAAGTTTAAAGTAAAGCCATGAGAGCTTATACTTCTATCATTGTAGAGAGTCAGTGTTTTTCTAACGGCAATGATAATAAATTAAAATGGAAATTAAAATGGAGTTGCATAAATGTATGTGTAGGTCGTGCATGTGGGTACAGCGACGTGGAAAAGGAAGGGTATGGGCTGCAGACGGCGGCATTAAGCATGGCGCTGTTTAACAACGGGCAGAAATGCGGCGCTTGCTTTGAACTCAAATGCATGGACAATCCTGATTGCAAGCCTGGGCAGCCCTCCCTCGTGGTAACCGGCACCAACCACTGTCCACCCAATTACAACGCTGCCAACGACAATGGCGGATGGTGCAATCCCCCCCTCGAGCATTTCGACATAGCCAAGCCTGTTTTCGCCAACCTTGCAGACTACAAGGCCGGCGTCATTCCCATCACTTACCGCAGGGTTCCATGCCAAAAGCAAGGAGGAATTCGCTTCACAATCACTGGAAACCCATACTTCAACGAAGTAATGGTGTGGAACGTGGGAGGAGCTGGGGACATAACGGCTGTCCAAGTCAAGGGCCACCGTAAGCTTAAATGGACCGCCATGTCTCGTCTGTGGGGTCAAAAATGGACCACCAACGCCATGATGGTTGGCGAGTCGCTCACCTTCAGGGTTCGAGCCAGCGATGGCAGATTCTCCACTGCATGGCATGTTGCTCCCGCCAATTGGCAGTTTGGTCAGACATTCGAAGGCAAGAACTTTAAGTAA

mRNA sequence

ATGACGAAGCCATCCTTCCCATCGACATGCCTGTTGGCATCTCTGCTAAGCCTGCTGTTGCTTATAATCGCCCATGCACACGCCGCGGCCTCGATGGGGCATCGCCCTTACGCGAAAGCGCACAGGGAATTAGGCGCGCGGCTTGTTAAAAAGCATAACAGGCCGCCGTTTAAGCCCGGACCCTTGGAAACGCGCTCCGACGTGGAAAAGGAAGGGTATGGGCTGCAGACGGCGGCATTAAGCATGGCGCTGTTTAACAACGGGCAGAAATGCGGCGCTTGCTTTGAACTCAAATGCATGGACAATCCTGATTGCAAGCCTGGGCAGCCCTCCCTCGTGGTAACCGGCACCAACCACTGTCCACCCAATTACAACGCTGCCAACGACAATGGCGGATGGTGCAATCCCCCCCTCGAGCATTTCGACATAGCCAAGCCTGTTTTCGCCAACCTTGCAGACTACAAGGCCGGCGTCATTCCCATCACTTACCGCAGGGTTCCATGCCAAAAGCAAGGAGGAATTCGCTTCACAATCACTGGAAACCCATACTTCAACGAAGTAATGGTGTGGAACGTGGGAGGAGCTGGGGACATAACGGCTGTCCAAGTCAAGGGCCACCGTAAGCTTAAATGGACCGCCATGTCTCGTCTGTGGGGTCAAAAATGGACCACCAACGCCATGATGGTTGGCGAGTCGCTCACCTTCAGGGTTCGAGCCAGCGATGGCAGATTCTCCACTGCATGGCATGTTGCTCCCGCCAATTGGCAGTTTGGTCAGACATTCGAAGGCAAGAACTTTAAGTAA

Coding sequence (CDS)

ATGACGAAGCCATCCTTCCCATCGACATGCCTGTTGGCATCTCTGCTAAGCCTGCTGTTGCTTATAATCGCCCATGCACACGCCGCGGCCTCGATGGGGCATCGCCCTTACGCGAAAGCGCACAGGGAATTAGGCGCGCGGCTTGTTAAAAAGCATAACAGGCCGCCGTTTAAGCCCGGACCCTTGGAAACGCGCTCCGACGTGGAAAAGGAAGGGTATGGGCTGCAGACGGCGGCATTAAGCATGGCGCTGTTTAACAACGGGCAGAAATGCGGCGCTTGCTTTGAACTCAAATGCATGGACAATCCTGATTGCAAGCCTGGGCAGCCCTCCCTCGTGGTAACCGGCACCAACCACTGTCCACCCAATTACAACGCTGCCAACGACAATGGCGGATGGTGCAATCCCCCCCTCGAGCATTTCGACATAGCCAAGCCTGTTTTCGCCAACCTTGCAGACTACAAGGCCGGCGTCATTCCCATCACTTACCGCAGGGTTCCATGCCAAAAGCAAGGAGGAATTCGCTTCACAATCACTGGAAACCCATACTTCAACGAAGTAATGGTGTGGAACGTGGGAGGAGCTGGGGACATAACGGCTGTCCAAGTCAAGGGCCACCGTAAGCTTAAATGGACCGCCATGTCTCGTCTGTGGGGTCAAAAATGGACCACCAACGCCATGATGGTTGGCGAGTCGCTCACCTTCAGGGTTCGAGCCAGCGATGGCAGATTCTCCACTGCATGGCATGTTGCTCCCGCCAATTGGCAGTTTGGTCAGACATTCGAAGGCAAGAACTTTAAGTAA

Protein sequence

MTKPSFPSTCLLASLLSLLLLIIAHAHAAASMGHRPYAKAHRELGARLVKKHNRPPFKPGPLETRSDVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDNPDCKPGQPSLVVTGTNHCPPNYNAANDNGGWCNPPLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFSTAWHVAPANWQFGQTFEGKNFK

Homology

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BLAST of Carg10445-RA vs. NCBI nr
Match: XP_022925799.1 (expansin-A9-like [Cucurbita moschata])

HSP 1 Score: 547.0 bits (1408), Expect = 3.6e-152
Identity = 262/285 (91.93%), Postives = 264/285 (92.63%), Query Frame = 0


Query: 1   MTKPSFPSTCLLASLLSLLLLIIAHAHAAASMGHRPYAKAHRELGARLVKKHNRPPFKPG 60
           MTKPSFPSTCLLASLLSLLLLI+AHAHAAASMGHRPYAKAHRELGARLVKKHNRPPFKPG
Sbjct: 1   MTKPSFPSTCLLASLLSLLLLIMAHAHAAASMGHRPYAKAHRELGARLVKKHNRPPFKPG 60

Query: 61  PLETR------------------SDVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDN 120
           P +                    SDVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDN
Sbjct: 61  PWKRARATFYEGGPGTFGRACGYSDVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDN 120

Query: 121 PDCKPGQPSLVVTGTNHCPPNYNAANDNGGWCNPPLEHFDIAKPVFANLADYKAGVIPIT 180
           PDCKPGQPSLVVTGTNHCPPNYNAANDNGGWCNPPLEHFDIAKPVFANLADYKAGVIPIT
Sbjct: 121 PDCKPGQPSLVVTGTNHCPPNYNAANDNGGWCNPPLEHFDIAKPVFANLADYKAGVIPIT 180

Query: 181 YRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKW 240
           YRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKW
Sbjct: 181 YRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKW 240

Query: 241 TTNAMMVGESLTFRVRASDGRFSTAWHVAPANWQFGQTFEGKNFK 268
           TTNAMMVGESLTFRVRASDGRFSTAWHVAPANWQFGQTFEGKNFK
Sbjct: 241 TTNAMMVGESLTFRVRASDGRFSTAWHVAPANWQFGQTFEGKNFK 285

[Close]

BLAST of Carg10445-RA vs. NCBI nr
Match: XP_023543964.1 (expansin-A9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 543.1 bits (1398), Expect = 5.2e-151
Identity = 260/285 (91.23%), Postives = 262/285 (91.93%), Query Frame = 0


Query: 1   MTKPSFPSTCLLASLLSLLLLIIAHAHAAASMGHRPYAKAHRELGARLVKKHNRPPFKPG 60
           M KPSFPSTCLLASLLSLLLLIIAHAHAAASMGHRPYAKAHRELGARLVKKHNRPPFKPG
Sbjct: 1   MMKPSFPSTCLLASLLSLLLLIIAHAHAAASMGHRPYAKAHRELGARLVKKHNRPPFKPG 60

Query: 61  PLETR------------------SDVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDN 120
           P +                    SDVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDN
Sbjct: 61  PWKRARATFYEGGPGTFGRACGYSDVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDN 120

Query: 121 PDCKPGQPSLVVTGTNHCPPNYNAANDNGGWCNPPLEHFDIAKPVFANLADYKAGVIPIT 180
           PDCKPGQPSLVVTGTNHCPPNYNAANDNGGWCNPPLEHFDIAKPVFANLADYKAGVIPIT
Sbjct: 121 PDCKPGQPSLVVTGTNHCPPNYNAANDNGGWCNPPLEHFDIAKPVFANLADYKAGVIPIT 180

Query: 181 YRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKW 240
           YRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAGDITAVQVKGHRKLKWT +SRLWGQKW
Sbjct: 181 YRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAGDITAVQVKGHRKLKWTTLSRLWGQKW 240

Query: 241 TTNAMMVGESLTFRVRASDGRFSTAWHVAPANWQFGQTFEGKNFK 268
           TTNAMMVGESLTFRVRASDGRFSTAWHVAPANWQFGQTFEGKNFK
Sbjct: 241 TTNAMMVGESLTFRVRASDGRFSTAWHVAPANWQFGQTFEGKNFK 285

[Close]

BLAST of Carg10445-RA vs. NCBI nr
Match: XP_022977999.1 (expansin-A9-like [Cucurbita maxima])

HSP 1 Score: 541.6 bits (1394), Expect = 1.5e-150
Identity = 259/285 (90.88%), Postives = 262/285 (91.93%), Query Frame = 0


Query: 1   MTKPSFPSTCLLASLLSLLLLIIAHAHAAASMGHRPYAKAHRELGARLVKKHNRPPFKPG 60
           MTKPSFPSTCLLASLLSL+LLI+AHAHAAASMGHRPYAKAHRELGARLVKKHNRPPFKPG
Sbjct: 1   MTKPSFPSTCLLASLLSLVLLIMAHAHAAASMGHRPYAKAHRELGARLVKKHNRPPFKPG 60

Query: 61  PLETR------------------SDVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDN 120
           P +                    SDVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDN
Sbjct: 61  PWKRARATFYEGGPGTFGSACGYSDVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDN 120

Query: 121 PDCKPGQPSLVVTGTNHCPPNYNAANDNGGWCNPPLEHFDIAKPVFANLADYKAGVIPIT 180
           PDCKPGQPSLVVTGTNHCPPNYNAANDNGGWCNPP EHFDIAKPVFANLADYKAGVIPIT
Sbjct: 121 PDCKPGQPSLVVTGTNHCPPNYNAANDNGGWCNPPHEHFDIAKPVFANLADYKAGVIPIT 180

Query: 181 YRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKW 240
           YRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKW
Sbjct: 181 YRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKW 240

Query: 241 TTNAMMVGESLTFRVRASDGRFSTAWHVAPANWQFGQTFEGKNFK 268
           TTNAMMVGESLTFRVRASDGRFSTAWHVAP NWQFGQTFEGKNFK
Sbjct: 241 TTNAMMVGESLTFRVRASDGRFSTAWHVAPVNWQFGQTFEGKNFK 285

[Close]

BLAST of Carg10445-RA vs. NCBI nr
Match: XP_008462508.1 (PREDICTED: expansin-A9-like [Cucumis melo])

HSP 1 Score: 411.0 bits (1055), Expect = 3.1e-111
Identity = 186/251 (74.10%), Postives = 210/251 (83.67%), Query Frame = 0


Query: 38  AKAHREL--GARLVKKHNRPPFKPGPLETR------------------SDVEKEGYGLQT 97
           A+  R+L  GA  +K+H RPPFKPGP                       DVEKEGYG+QT
Sbjct: 30  AEGRRQLGGGAMFIKQHRRPPFKPGPWNHAHATFYEGGSGTFGGACGYDDVEKEGYGMQT 89

Query: 98  AALSMALFNNGQKCGACFELKCMDNPD-CKPGQPSLVVTGTNHCPPNYNAANDNGGWCNP 157
           AALSMALFNNGQ CGAC+E+KC+D+P  CKPGQPSL+VTGTNHCPPNYN   DNGGWCNP
Sbjct: 90  AALSMALFNNGQSCGACYEIKCVDDPQWCKPGQPSLMVTGTNHCPPNYNLPRDNGGWCNP 149

Query: 158 PLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAG 217
           PLEHFDIAKPVF N+A++KAG++PITYRR+PC+K+GGIRFTITGNPY+NEV+VWNVGGAG
Sbjct: 150 PLEHFDIAKPVFLNIAEFKAGIVPITYRRIPCKKEGGIRFTITGNPYYNEVLVWNVGGAG 209

Query: 218 DITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFSTAWHVAPANWQ 268
           D+T+VQVKGHRKLKWT MSR WGQKWTTNAM+VGESLTFRVRASDGRFST+WHVAP  WQ
Sbjct: 210 DLTSVQVKGHRKLKWTPMSRTWGQKWTTNAMLVGESLTFRVRASDGRFSTSWHVAPPTWQ 269

[Close]

BLAST of Carg10445-RA vs. NCBI nr
Match: XP_004143366.1 (PREDICTED: expansin-A3-like [Cucumis sativus] >KGN48207.1 hypothetical protein Csa_6G448160 [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 3.4e-110
Identity = 185/251 (73.71%), Postives = 210/251 (83.67%), Query Frame = 0


Query: 38  AKAHREL--GARLVKKHNRPPFKPGPLETR------------------SDVEKEGYGLQT 97
           AK HR+L  GA ++K+H RPPFKPGP                       DVEKEGYG+QT
Sbjct: 30  AKRHRQLGEGATIIKQHRRPPFKPGPWNHAHATFYEGGSGTFGAACGYEDVEKEGYGMQT 89

Query: 98  AALSMALFNNGQKCGACFELKCMDNPD-CKPGQPSLVVTGTNHCPPNYNAANDNGGWCNP 157
           AALS ALFNNGQ CGAC+E+KC+D+P  CKPGQPSLVVTGTNHCPPN+N  NDNGGWCNP
Sbjct: 90  AALSTALFNNGQSCGACYEIKCVDDPQWCKPGQPSLVVTGTNHCPPNHNLPNDNGGWCNP 149

Query: 158 PLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAG 217
           PLEHFDIAKPVF N+A++KAG++PITYRRVPC+K GGIRFTITGNPY+N+V+VWNVGGAG
Sbjct: 150 PLEHFDIAKPVFLNIAEFKAGIVPITYRRVPCKKGGGIRFTITGNPYYNQVLVWNVGGAG 209

Query: 218 DITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFSTAWHVAPANWQ 268
           D+ +VQVKGHRKLKWT+MSR WGQKW TNAM+VGESLTF+VRASDGRFST+WHVAP  WQ
Sbjct: 210 DLKSVQVKGHRKLKWTSMSRSWGQKWITNAMLVGESLTFKVRASDGRFSTSWHVAPPTWQ 269

[Close]

BLAST of Carg10445-RA vs. TAIR10
Match: AT5G02260.1 (expansin A9)

HSP 1 Score: 288.1 bits (736), Expect = 5.5e-78
Identity = 123/198 (62.12%), Postives = 161/198 (81.31%), Query Frame = 0


Query: 71  EGYGLQTAALSMALFNNGQKCGACFELKCMDNPD-CKPGQPSLVVTGTNHCPPNYNAAND 130
           +GYG+ TAALS ALFNNG  CG+CFELKC+++P  C PG PS+++T TN CPPN+N A+D
Sbjct: 61  QGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASD 120

Query: 131 NGGWCNPPLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFNEVMV 190
           NGGWCNPP EHFD+A P+F ++A YKAG++P++YRR+PC+K+GGIRFTI G  YFN V+V
Sbjct: 121 NGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLV 180

Query: 191 WNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFSTAWH 250
            NV GAGD+  V VKG    +W  +SR WGQ W +NA++VG+SL+FRV+ SDGR ST+ +
Sbjct: 181 TNVAGAGDVIKVSVKG-SNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNN 240

Query: 251 VAPANWQFGQTFEGKNFK 268
           +AP+NWQFGQT+ GKNF+
Sbjct: 241 IAPSNWQFGQTYSGKNFR 257

[Close]

BLAST of Carg10445-RA vs. TAIR10
Match: AT2G37640.1 (Barwin-like endoglucanases superfamily protein)

HSP 1 Score: 283.1 bits (723), Expect = 1.8e-76
Identity = 125/198 (63.13%), Postives = 154/198 (77.78%), Query Frame = 0


Query: 71  EGYGLQTAALSMALFNNGQKCGACFELKCMDNPD-CKPGQPSLVVTGTNHCPPNYNAAND 130
           +GYG+ TAALS ALFNNG  CGACFE+KC D+P  C PG PS++VT TN CPPN+   +D
Sbjct: 65  QGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSD 124

Query: 131 NGGWCNPPLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFNEVMV 190
           +GGWCNPP EHFD+A P+F  +  Y+AG++P++YRRVPC+K GGIRFT+ G  YFN V+V
Sbjct: 125 DGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLV 184

Query: 191 WNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFSTAWH 250
            NV GAGDI  V VKG  K  W  MSR WGQ W +NA+++G+SL+FRV ASD R ST+W+
Sbjct: 185 TNVAGAGDINGVSVKG-SKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWN 244

Query: 251 VAPANWQFGQTFEGKNFK 268
           VAPA WQFGQTF GKNF+
Sbjct: 245 VAPATWQFGQTFSGKNFR 261

[Close]

BLAST of Carg10445-RA vs. TAIR10
Match: AT2G39700.1 (expansin A4)

HSP 1 Score: 280.4 bits (716), Expect = 1.1e-75
Identity = 121/198 (61.11%), Postives = 153/198 (77.27%), Query Frame = 0


Query: 71  EGYGLQTAALSMALFNNGQKCGACFELKCMDNPD-CKPGQPSLVVTGTNHCPPNYNAAND 130
           +GYG  TAALS ALFNNG  CGACFELKC ++P  C  G PS+++T TN CPPN    +D
Sbjct: 60  QGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSD 119

Query: 131 NGGWCNPPLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFNEVMV 190
           NGGWCNPP EHFD+A PVF  +A Y+AG++P++YRRVPC+K+GGIRFTI G+ YFN V++
Sbjct: 120 NGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLI 179

Query: 191 WNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFSTAWH 250
            NV GAGDI    VKG R   W ++SR WGQ W +NA++VG++L+FRV  SD R ST+W+
Sbjct: 180 TNVAGAGDIVRASVKGSR-TGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWN 239

Query: 251 VAPANWQFGQTFEGKNFK 268
           + P+NWQFGQTF GKNF+
Sbjct: 240 MVPSNWQFGQTFVGKNFR 256

[Close]

BLAST of Carg10445-RA vs. TAIR10
Match: AT5G05290.1 (expansin A2)

HSP 1 Score: 280.0 bits (715), Expect = 1.5e-75
Identity = 122/201 (60.70%), Postives = 158/201 (78.61%), Query Frame = 0


Query: 67  DVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDNPD-CKPGQPSLVVTGTNHCPPNYN 126
           ++  +GYGLQTAALS ALFN+GQKCGACFEL+C D+P+ C PG  S++V+ TN CPPN+ 
Sbjct: 57  NLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPG--SIIVSATNFCPPNFA 116

Query: 127 AANDNGGWCNPPLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFN 186
            ANDNGGWCNPPL+HFD+A+P F  +A Y+AG++P+ +RRVPC+K GGIRFTI GNPYF+
Sbjct: 117 LANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFD 176

Query: 187 EVMVWNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFS 246
            V++ NVGGAGDI AV +KG +  +W +MSR WGQ W +N  + G+SL+F+V  SDGR  
Sbjct: 177 LVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTV 236

Query: 247 TAWHVAPANWQFGQTFEGKNF 267
            ++ V P +WQFGQTFEG  F
Sbjct: 237 VSYDVVPHDWQFGQTFEGGQF 255

[Close]

BLAST of Carg10445-RA vs. TAIR10
Match: AT3G55500.1 (expansin A16)

HSP 1 Score: 279.3 bits (713), Expect = 2.6e-75
Identity = 121/198 (61.11%), Postives = 155/198 (78.28%), Query Frame = 0


Query: 71  EGYGLQTAALSMALFNNGQKCGACFELKCMDNPD-CKPGQPSLVVTGTNHCPPNYNAAND 130
           +GYG  TAALS +LFN+GQ CGACFE+KC+++P  C PG PS+ VT TN CPPN    +D
Sbjct: 63  QGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSD 122

Query: 131 NGGWCNPPLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFNEVMV 190
           NGGWCNPP  HFD+A PVF  +A+Y+AG++PI+YRRV C+K GGIRFTI G+ YFN V++
Sbjct: 123 NGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLI 182

Query: 191 WNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFSTAWH 250
            NV GAGDI    VKG  K  W +++R WGQ W +NA++VG+SL+FRV +SD R ST+W+
Sbjct: 183 TNVAGAGDIARTSVKG-SKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWN 242

Query: 251 VAPANWQFGQTFEGKNFK 268
           +AP+NWQFGQTF GKNF+
Sbjct: 243 IAPSNWQFGQTFVGKNFR 259

[Close]

BLAST of Carg10445-RA vs. Swiss-Prot
Match: sp|Q9LZ99|EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana OX=3702 GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 9.9e-77
Identity = 123/198 (62.12%), Postives = 161/198 (81.31%), Query Frame = 0


Query: 71  EGYGLQTAALSMALFNNGQKCGACFELKCMDNPD-CKPGQPSLVVTGTNHCPPNYNAAND 130
           +GYG+ TAALS ALFNNG  CG+CFELKC+++P  C PG PS+++T TN CPPN+N A+D
Sbjct: 61  QGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASD 120

Query: 131 NGGWCNPPLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFNEVMV 190
           NGGWCNPP EHFD+A P+F ++A YKAG++P++YRR+PC+K+GGIRFTI G  YFN V+V
Sbjct: 121 NGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLV 180

Query: 191 WNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFSTAWH 250
            NV GAGD+  V VKG    +W  +SR WGQ W +NA++VG+SL+FRV+ SDGR ST+ +
Sbjct: 181 TNVAGAGDVIKVSVKG-SNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNN 240

Query: 251 VAPANWQFGQTFEGKNFK 268
           +AP+NWQFGQT+ GKNF+
Sbjct: 241 IAPSNWQFGQTYSGKNFR 257

[Close]

BLAST of Carg10445-RA vs. Swiss-Prot
Match: sp|O80932|EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.2e-75
Identity = 125/198 (63.13%), Postives = 154/198 (77.78%), Query Frame = 0


Query: 71  EGYGLQTAALSMALFNNGQKCGACFELKCMDNPD-CKPGQPSLVVTGTNHCPPNYNAAND 130
           +GYG+ TAALS ALFNNG  CGACFE+KC D+P  C PG PS++VT TN CPPN+   +D
Sbjct: 65  QGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSD 124

Query: 131 NGGWCNPPLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFNEVMV 190
           +GGWCNPP EHFD+A P+F  +  Y+AG++P++YRRVPC+K GGIRFT+ G  YFN V+V
Sbjct: 125 DGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLV 184

Query: 191 WNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFSTAWH 250
            NV GAGDI  V VKG  K  W  MSR WGQ W +NA+++G+SL+FRV ASD R ST+W+
Sbjct: 185 TNVAGAGDINGVSVKG-SKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWN 244

Query: 251 VAPANWQFGQTFEGKNFK 268
           VAPA WQFGQTF GKNF+
Sbjct: 245 VAPATWQFGQTFSGKNFR 261

[Close]

BLAST of Carg10445-RA vs. Swiss-Prot
Match: sp|Q6YYW5|EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA32 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.1e-74
Identity = 123/202 (60.89%), Postives = 153/202 (75.74%), Query Frame = 0


Query: 67  DVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDNPD-CKPGQPSLVVTGTNHCPPNYN 126
           D  KEGYG+QT A+S  LF  G  CGAC+E+KC+D+PD CK G   LVVT TN CPPN  
Sbjct: 67  DTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPG 126

Query: 127 AANDNGGWCNPPLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFN 186
            +NDNGGWCNPP EHFD++ P F  +A  KAG++PI+YRRVPC K GGIR+TITGNPYFN
Sbjct: 127 QSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFN 186

Query: 187 EVMVWNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFS 246
            VMV NVGGAGD+  + VKG++++KWT + R WGQ+W T+ ++ GESLTFRV   D R +
Sbjct: 187 LVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKA 246

Query: 247 TAWHVAPANWQFGQTFEG-KNF 267
           T+WHV P +WQFG T++  KNF
Sbjct: 247 TSWHVLPPDWQFGVTYQATKNF 268

[Close]

BLAST of Carg10445-RA vs. Swiss-Prot
Match: sp|O48818|EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.1e-74
Identity = 121/198 (61.11%), Postives = 153/198 (77.27%), Query Frame = 0


Query: 71  EGYGLQTAALSMALFNNGQKCGACFELKCMDNPD-CKPGQPSLVVTGTNHCPPNYNAAND 130
           +GYG  TAALS ALFNNG  CGACFELKC ++P  C  G PS+++T TN CPPN    +D
Sbjct: 60  QGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSD 119

Query: 131 NGGWCNPPLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFNEVMV 190
           NGGWCNPP EHFD+A PVF  +A Y+AG++P++YRRVPC+K+GGIRFTI G+ YFN V++
Sbjct: 120 NGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLI 179

Query: 191 WNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFSTAWH 250
            NV GAGDI    VKG R   W ++SR WGQ W +NA++VG++L+FRV  SD R ST+W+
Sbjct: 180 TNVAGAGDIVRASVKGSR-TGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWN 239

Query: 251 VAPANWQFGQTFEGKNFK 268
           + P+NWQFGQTF GKNF+
Sbjct: 240 MVPSNWQFGQTFVGKNFR 256

[Close]

BLAST of Carg10445-RA vs. Swiss-Prot
Match: sp|Q38866|EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana OX=3702 GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 280.0 bits (715), Expect = 2.7e-74
Identity = 122/201 (60.70%), Postives = 158/201 (78.61%), Query Frame = 0


Query: 67  DVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDNPD-CKPGQPSLVVTGTNHCPPNYN 126
           ++  +GYGLQTAALS ALFN+GQKCGACFEL+C D+P+ C PG  S++V+ TN CPPN+ 
Sbjct: 57  NLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPG--SIIVSATNFCPPNFA 116

Query: 127 AANDNGGWCNPPLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFN 186
            ANDNGGWCNPPL+HFD+A+P F  +A Y+AG++P+ +RRVPC+K GGIRFTI GNPYF+
Sbjct: 117 LANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFD 176

Query: 187 EVMVWNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFS 246
            V++ NVGGAGDI AV +KG +  +W +MSR WGQ W +N  + G+SL+F+V  SDGR  
Sbjct: 177 LVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTV 236

Query: 247 TAWHVAPANWQFGQTFEGKNF 267
            ++ V P +WQFGQTFEG  F
Sbjct: 237 VSYDVVPHDWQFGQTFEGGQF 255

[Close]

BLAST of Carg10445-RA vs. TrEMBL
Match: tr|A0A1S3CH49|A0A1S3CH49_CUCME (Expansin OS=Cucumis melo OX=3656 GN=LOC103500844 PE=3 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 2.1e-111
Identity = 186/251 (74.10%), Postives = 210/251 (83.67%), Query Frame = 0


Query: 38  AKAHREL--GARLVKKHNRPPFKPGPLETR------------------SDVEKEGYGLQT 97
           A+  R+L  GA  +K+H RPPFKPGP                       DVEKEGYG+QT
Sbjct: 30  AEGRRQLGGGAMFIKQHRRPPFKPGPWNHAHATFYEGGSGTFGGACGYDDVEKEGYGMQT 89

Query: 98  AALSMALFNNGQKCGACFELKCMDNPD-CKPGQPSLVVTGTNHCPPNYNAANDNGGWCNP 157
           AALSMALFNNGQ CGAC+E+KC+D+P  CKPGQPSL+VTGTNHCPPNYN   DNGGWCNP
Sbjct: 90  AALSMALFNNGQSCGACYEIKCVDDPQWCKPGQPSLMVTGTNHCPPNYNLPRDNGGWCNP 149

Query: 158 PLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAG 217
           PLEHFDIAKPVF N+A++KAG++PITYRR+PC+K+GGIRFTITGNPY+NEV+VWNVGGAG
Sbjct: 150 PLEHFDIAKPVFLNIAEFKAGIVPITYRRIPCKKEGGIRFTITGNPYYNEVLVWNVGGAG 209

Query: 218 DITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFSTAWHVAPANWQ 268
           D+T+VQVKGHRKLKWT MSR WGQKWTTNAM+VGESLTFRVRASDGRFST+WHVAP  WQ
Sbjct: 210 DLTSVQVKGHRKLKWTPMSRTWGQKWTTNAMLVGESLTFRVRASDGRFSTSWHVAPPTWQ 269

[Close]

BLAST of Carg10445-RA vs. TrEMBL
Match: tr|A0A0A0KIG7|A0A0A0KIG7_CUCSA (Expansin OS=Cucumis sativus OX=3659 GN=Csa_6G448160 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 2.3e-110
Identity = 185/251 (73.71%), Postives = 210/251 (83.67%), Query Frame = 0


Query: 38  AKAHREL--GARLVKKHNRPPFKPGPLETR------------------SDVEKEGYGLQT 97
           AK HR+L  GA ++K+H RPPFKPGP                       DVEKEGYG+QT
Sbjct: 30  AKRHRQLGEGATIIKQHRRPPFKPGPWNHAHATFYEGGSGTFGAACGYEDVEKEGYGMQT 89

Query: 98  AALSMALFNNGQKCGACFELKCMDNPD-CKPGQPSLVVTGTNHCPPNYNAANDNGGWCNP 157
           AALS ALFNNGQ CGAC+E+KC+D+P  CKPGQPSLVVTGTNHCPPN+N  NDNGGWCNP
Sbjct: 90  AALSTALFNNGQSCGACYEIKCVDDPQWCKPGQPSLVVTGTNHCPPNHNLPNDNGGWCNP 149

Query: 158 PLEHFDIAKPVFANLADYKAGVIPITYRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAG 217
           PLEHFDIAKPVF N+A++KAG++PITYRRVPC+K GGIRFTITGNPY+N+V+VWNVGGAG
Sbjct: 150 PLEHFDIAKPVFLNIAEFKAGIVPITYRRVPCKKGGGIRFTITGNPYYNQVLVWNVGGAG 209

Query: 218 DITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMVGESLTFRVRASDGRFSTAWHVAPANWQ 268
           D+ +VQVKGHRKLKWT+MSR WGQKW TNAM+VGESLTF+VRASDGRFST+WHVAP  WQ
Sbjct: 210 DLKSVQVKGHRKLKWTSMSRSWGQKWITNAMLVGESLTFKVRASDGRFSTSWHVAPPTWQ 269

[Close]

BLAST of Carg10445-RA vs. TrEMBL
Match: tr|A0A2P5FVI7|A0A2P5FVI7_9ROSA (Expansin OS=Trema orientalis OX=63057 GN=TorRG33x02_025760 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 4.0e-99
Identity = 177/278 (63.67%), Postives = 208/278 (74.82%), Query Frame = 0


Query: 12  LASLLSLLLLI--IAHAHAAA-SMGHRPYAKAHRELGARLVKKHNRPPFKPGPLETR--- 71
           L  LL LLL++  +   H  A   GHR + ++       LV KH+RP FKPGP       
Sbjct: 8   LLGLLFLLLVVGGLLPDHVQAWETGHRRHGRSGHGRNP-LVHKHHRPKFKPGPWINAHAT 67

Query: 72  ---------------SDVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDNPD-CKPGQ 131
                           DV  +GYGL+T ALS ALFN GQ CGAC+E+KC+D+P  CKPGQ
Sbjct: 68  FYDGGSGTFGGACGYDDVVNKGYGLETVALSEALFNQGQACGACYEIKCVDDPQWCKPGQ 127

Query: 132 PSLVVTGTNHCPPNYNAANDNGGWCNPPLEHFDIAKPVFANLADYKAGVIPITYRRVPCQ 191
           PSL VT TNHCPPNY  +++NGGWCNPP  HFDIAKPVF+ +ADY AG+IP++YRRVPCQ
Sbjct: 128 PSLFVTATNHCPPNYYESSENGGWCNPPRHHFDIAKPVFSKIADYTAGIIPVSYRRVPCQ 187

Query: 192 KQGGIRFTITGNPYFNEVMVWNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKWTTNAMMV 251
           K+GGIRFTITGNPYFNEV+VWNVGGAGD+ ++QVKG++ LKWT M R WGQ+W T+AMMV
Sbjct: 188 KRGGIRFTITGNPYFNEVLVWNVGGAGDVVSLQVKGNKNLKWTPMKRTWGQRWVTDAMMV 247

Query: 252 GESLTFRVRASDGRFSTAWHVAPANWQFGQTFEGKNFK 268
           GESLTFRVRASDGRFSTAWH+AP NWQFGQTFEGKNFK
Sbjct: 248 GESLTFRVRASDGRFSTAWHIAPKNWQFGQTFEGKNFK 284

[Close]

BLAST of Carg10445-RA vs. TrEMBL
Match: tr|A0A2P5BJN5|A0A2P5BJN5_PARAD (Expansin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_232650 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 3.8e-97
Identity = 175/284 (61.62%), Postives = 209/284 (73.59%), Query Frame = 0


Query: 5   SFPSTCLLASLLSLLL---LIIAHAHAAASMGHRPYAKAHRELGARLVKKHNRPPFKPGP 64
           + P   LL  L  LL+   L+  H  A  + GHR   ++        V KH+RP FKPGP
Sbjct: 2   ALPLRALLGFLFLLLVAGGLLPDHVQAWET-GHRGNGRSGHGRNPP-VHKHHRPKFKPGP 61

Query: 65  LETR------------------SDVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDNP 124
                                  DV  +GYGL+T ALS ALFN GQ CGAC+E+KC+D+P
Sbjct: 62  WINAHATFYDGGSGTFGGACGYDDVVNKGYGLETVALSEALFNQGQACGACYEIKCVDDP 121

Query: 125 D-CKPGQPSLVVTGTNHCPPNYNAANDNGGWCNPPLEHFDIAKPVFANLADYKAGVIPIT 184
             CKPGQPSL+VT TNHCPPNY  +++NGGWCNPP  HFDIAKPVF+ +ADY AG+IP++
Sbjct: 122 QWCKPGQPSLLVTATNHCPPNYYESSENGGWCNPPRHHFDIAKPVFSKIADYTAGIIPVS 181

Query: 185 YRRVPCQKQGGIRFTITGNPYFNEVMVWNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKW 244
           YRRVPCQK+GGIRFTITGNPYFNEV+VWNVGGAGD+ ++QVKG++ LKWT M R+WGQ+W
Sbjct: 182 YRRVPCQKRGGIRFTITGNPYFNEVLVWNVGGAGDVVSLQVKGNKNLKWTPMKRMWGQRW 241

Query: 245 TTNAMMVGESLTFRVRASDGRFSTAWHVAPANWQFGQTFEGKNF 267
            T+AMMVGESLTFRVRASDGRFSTAWH+AP NWQFGQTF+GKNF
Sbjct: 242 VTDAMMVGESLTFRVRASDGRFSTAWHIAPKNWQFGQTFQGKNF 283

[Close]

BLAST of Carg10445-RA vs. TrEMBL
Match: tr|W9RX24|W9RX24_9ROSA (Expansin OS=Morus notabilis OX=981085 GN=L484_022586 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 8.4e-97
Identity = 172/280 (61.43%), Postives = 206/280 (73.57%), Query Frame = 0


Query: 12  LASLLSLLLLIIAHAHAAASMGHRPYAKAHRELGARL-----VKKHNRPPFKPGPLETR- 71
           L +LL LLLL++    AA     R +   HR +G         +KH+RP F+PGP     
Sbjct: 5   LRALLGLLLLVLVTV-AALPDHVRAWRTPHRHVGRGRGRFPPPRKHHRPNFRPGPWIPAH 64

Query: 72  -----------------SDVEKEGYGLQTAALSMALFNNGQKCGACFELKCMDNPD-CKP 131
                             DV +EGYGL+T ALS ALFN GQ CGAC+E+KCMD+P  CK 
Sbjct: 65  ATFYEGGSGTFGGACGYDDVVREGYGLETVALSEALFNKGQSCGACYEIKCMDDPQWCKL 124

Query: 132 GQPSLVVTGTNHCPPNYNAANDNGGWCNPPLEHFDIAKPVFANLADYKAGVIPITYRRVP 191
           GQPSL V+ TNHCPPNY  ++DNGGWCNPP  HFDIAKPVF  +A+Y+ G+IP++YRRVP
Sbjct: 125 GQPSLFVSATNHCPPNYYQSSDNGGWCNPPRHHFDIAKPVFLKIAEYRGGIIPVSYRRVP 184

Query: 192 CQKQGGIRFTITGNPYFNEVMVWNVGGAGDITAVQVKGHRKLKWTAMSRLWGQKWTTNAM 251
           CQKQGGIRFT+TGNPYFNEV+VWNVGGAGD+ ++QVKG++ LKWT M R+WGQKW T+A 
Sbjct: 185 CQKQGGIRFTVTGNPYFNEVLVWNVGGAGDVVSLQVKGNKDLKWTPMKRMWGQKWVTDAK 244

Query: 252 MVGESLTFRVRASDGRFSTAWHVAPANWQFGQTFEGKNFK 268
           MVGESLTFRVRASDGRFST+WH+AP  WQFGQTFEGKNF+
Sbjct: 245 MVGESLTFRVRASDGRFSTSWHIAPKTWQFGQTFEGKNFR 283

The following BLAST results are available for this feature:

BLAST of Carg10445-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925799.1	3.6e-152	91.93	expansin-A9-like [Cucurbita moschata]	[more]
XP_023543964.1	5.2e-151	91.23	expansin-A9-like [Cucurbita pepo subsp. pepo]	[more]
XP_022977999.1	1.5e-150	90.88	expansin-A9-like [Cucurbita maxima]	[more]
XP_008462508.1	3.1e-111	74.10	PREDICTED: expansin-A9-like [Cucumis melo]	[more]
XP_004143366.1	3.4e-110	73.71	PREDICTED: expansin-A3-like [Cucumis sativus] >KGN48207.1 hypothetical protein C...	[more]

BLAST of Carg10445-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G02260.1	5.5e-78	62.12	expansin A9	[more]
AT2G37640.1	1.8e-76	63.13	Barwin-like endoglucanases superfamily protein	[more]
AT2G39700.1	1.1e-75	61.11	expansin A4	[more]
AT5G05290.1	1.5e-75	60.70	expansin A2	[more]
AT3G55500.1	2.6e-75	61.11	expansin A16	[more]

BLAST of Carg10445-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LZ99\|EXPA9_ARATH	9.9e-77	62.12	Expansin-A9 OS=Arabidopsis thaliana OX=3702 GN=EXPA9 PE=2 SV=1	[more]
sp\|O80932\|EXPA3_ARATH	3.2e-75	63.13	Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1	[more]
sp\|Q6YYW5\|EXP32_ORYSJ	2.1e-74	60.89	Expansin-A32 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA32 PE=2 SV=1	[more]
sp\|O48818\|EXPA4_ARATH	2.1e-74	61.11	Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1	[more]
sp\|Q38866\|EXPA2_ARATH	2.7e-74	60.70	Expansin-A2 OS=Arabidopsis thaliana OX=3702 GN=EXPA2 PE=2 SV=2	[more]

BLAST of Carg10445-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CH49\|A0A1S3CH49_CUCME	2.1e-111	74.10	Expansin OS=Cucumis melo OX=3656 GN=LOC103500844 PE=3 SV=1	[more]
tr\|A0A0A0KIG7\|A0A0A0KIG7_CUCSA	2.3e-110	73.71	Expansin OS=Cucumis sativus OX=3659 GN=Csa_6G448160 PE=3 SV=1	[more]
tr\|A0A2P5FVI7\|A0A2P5FVI7_9ROSA	4.0e-99	63.67	Expansin OS=Trema orientalis OX=63057 GN=TorRG33x02_025760 PE=3 SV=1	[more]
tr\|A0A2P5BJN5\|A0A2P5BJN5_PARAD	3.8e-97	61.62	Expansin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_232650 PE=3 SV=1	[more]
tr\|W9RX24\|W9RX24_9ROSA	8.4e-97	61.43	Expansin OS=Morus notabilis OX=981085 GN=L484_022586 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **Biological Process**
Term	Definition
GO:0009664	plant-type cell wall organization

Vocabulary: **INTERPRO**
Term	Definition
IPR009009	RlpA-like_DPBB
IPR036908	RlpA-like_sf
IPR007117	Expansin_CBD
IPR036749	Expansin_CBD_sf
IPR007112	Expansin/allergen_DPBB_dom
IPR007118	Expan_Lol_pI
IPR002963	Expansin

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg10445	Carg10445	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10445-RA.exon.1	Carg10445-RA.exon.1	exon
Carg10445-RA.exon.2	Carg10445-RA.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10445-RA.CDS.1	Carg10445-RA.CDS.1	CDS
Carg10445-RA.CDS.2	Carg10445-RA.CDS.2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg10445-RA	Carg10445-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 131..148 score: 71.48 coord: 184..205 score: 59.55 coord: 112..122 score: 59.7 coord: 220..241 score: 46.67 coord: 249..265 score: 62.94 coord: 72..86 score: 77.56 coord: 172..184 score: 72.82 coord: 148..161 score: 41.19
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 211..225 score: 52.0 coord: 81..99 score: 63.55 coord: 156..172 score: 54.71 coord: 249..263 score: 57.0
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 77..163 e-value: 3.0E-44 score: 163.0
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 60..173 score: 23.494
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	G3DSA:2.60.40.760		coord: 172..266 e-value: 3.4E-23 score: 83.4
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	SSF49590	PHL pollen allergen	coord: 170..263
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Pollen_allerg_1	coord: 174..252 e-value: 9.9E-23 score: 79.9
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 183..263 score: 20.38
IPR036908	RlpA-like domain superfamily	GENE3D	G3DSA:2.40.40.10		coord: 64..169 e-value: 2.9E-26 score: 94.1
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	SSF50685	Barwin-like endoglucanases	coord: 71..191
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 77..163 e-value: 4.7E-17 score: 61.9
None	No IPR available	PANTHER	PTHR31867:SF12	SUBFAMILY NOT NAMED	coord: 66..267
None	No IPR available	PANTHER	PTHR31867	FAMILY NOT NAMED	coord: 66..267