Carg09974-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09974-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	FAD dependent oxidoreductase
Location	Cucurbita_argyrosperma_scaffold_030 : 764899 .. 767518 (+)
Sequence length	1328

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCCGCGCCGTCGTTAGCACTTTCTTCTCTCTCGGCGCGTCCTCTGAGGTTCTTCTTCAACCTTTTCTTTACCTAATTAATGTGCGTTTCTGAGTTCCTTTGCGAAATGTATATGTATGTACTCAGAGAGGGGTATCCTTTTGTAGGTACGCAGTGCTTGGAGCTGGTTTTGCTGGCCTTTCGGTTACTTGGCATTTGTTGAAGGTACGCCGGCTCTGTGGCTTTCTTTTTCCTCTTCGTTTCATCATACATCAACACCTTGCTTTCGCTGCATACTCTGTTTTCTTCAATCTTTTTTCGGTTGTTGGACTGTGGTTTTTGTGTATTGAACTTTTGTGATACTCCATTACAAGGGTACGTGAATGAATCGATGACATATCCAAATGAGAACGATTTTAAAGAATTAATATCTATATTGACAAATGCACCTTACTTTTCGGTGACACAACCATAAAAATTTCAAAGTTAAAGTAGACTTGTTGCGCGACCTCCTGTATATTTTCTTGAGAAGCATATGAGAGAGGAGAAAACATGTTGAAAGAAACCGGTTCATTCTTAGAACTAAATAGGTTACTTGACATTGTCGCTAAAGGACATCAGGACCACAAGTGTCGAATCCAGATTTTGAATCTTAATCCAAATTCGGGGTAATTTGTAACCCTATGATGACATACACTCTCTTGAAATATGTTCCCTCATTTTGTCAGCCCTAAACCAAGGTCTATTGAACCTTGCGTAGCTATTGCATCTACATATTCTCTATGTAAATAACTGGACAGATTCCCGAGGTTCCTACTTCCTCTAATGCTTCAGGCGGATCGGTCTTGCTTCTGCTACCAATTAGTATACTTTGAGTTTTATCTCAAGGTTCTTTATCTTGCCAATGTGAGGCTTTAGTCGCATTCCAACCCTTGTTACTTAATGTTTCATTTCATCGTATTGTGTTTATTGCAGCTCTGTCCTAAGGACATATCTCTATGTATCGACATATACGACGAAGTTGGCATTGGTGGAGGAGCATCTGGAGTCGCCGGAGGGCTTCTTCACCCTTATTCTCCTAAAGGTTCCAACAACCTACTTAGTTACCCAATCTCCCTTGCAAAAATTGGCTAATCCCTTGAAATTATGTCAGTTAAACCTCTCTGGAAAGGTGCCGAGTGTTGGGCTGAGTGCTTAAAGCTTTTAAGCGTTGCGGAGTCAGCAATTCCCTCCAAAGAGTTGGATGGATATCATAATATGAATGGATCCGTTGTTCTAAGACGGTCTGCTACTTCATTTCTTTTAGCTTCTGAGAGATATATATACTCATTCCCATCACTTGACATGCTTCTGCTGTATTTTGTTTACTTCAGGGGTATCTTGAGGCCTGCAATCAGCTTGAAGAATCTCATGATGTTAAAAGAAGTAATTATATCCTTCTATTTGTGTTTCATTACTCTGATTAGAACGTCAAAACGACCTTGATAGTATCTTTGTTATTTACCCAGAATGCTCAGAATGGACTCGATGGCTGCAGATGCTGCCCAGAATCTTGTTCCTAAGCTTAACATTCCTCTAAATACAGCTTTTTATATGCCTCAAGCTGTAAATATCAACTCTCAACGTTATCTTGAGGTCACTACTTCAAAGCAAATGATACTTAAGTTGTTCTTCCATCTGTTATGATTAAAACAAATCTTTGATCTTTTTTGTTCCCAATCTTATGTATAGGCGCTGTTTATAGCATGTCAAAATCTGACCAGGGAAACATCACCCTCAAGTCTTGGTCATAAGGAGTTGTTCTTGCAGAAAAAGTCTATTAACGAACTGGGTGAACTAGAAGGTAAGTGAAATTTCTCAAGCCAAATCTTCTCAGCATTATCTTGGAATTAAACTGTTTAAAGAACATTCTGTGCAGGGACATACGATGCTGTGATTGTTTGTCTTGGTGCTAAAATGATCATGCTTCCTGAACTTACTGGAAAGCTTCCTTTGAGAACTTGCAGAGGTGTGGTAGCTCATTTTCAGCTTCCCGACGATATCAGGTATTGGTTTCTTGTGCCTAGTATGTATTATCCCTCCACAAAATTCATAATTTGCGCCCATGCGGGGGTCGAGATTTGAACTTCAAACCCCTGGATCCTGTTAGTCTGATATCTGGTATAATACTATAATTTCAGCAATGCATACCCAGAGCTTGGGCCTTCTATACTGTCAGATGCATGGCTAGCCATACAGAGTCCTAGAAGTTTATATATGGGTTCAACATGGGAATGGAAATCAACAAATTCATCACCTGAAGTTTCAGAAGAGGAAGGCTCAAGGGCGGTTGCAGAACTCTTACCAAAGGTGTCTGCCATTTATCCCTCAATAAAGGAGTGGAGTTTCAGGAGAGCAAGGGCTGGTCTTAGAGCAATGCCACCACTCACTCCTCATGGATCTCTTCCTCTTATGGGTTGTATAGACGAGATTGTAAGACCTAACAGCTCTTGCAAGTACTGGTTATTTGGAGGGCTTGGTTCTAGGGGATTGTTGTACCATGGTTGGCTTGGGAAACTAACAGCACAGGCTGTGCTTTCATGTAAGGAAGAACTAATCCCATCTGAACTAATCTCTTGGAAGAAAGTAATGAATAGTTAA

mRNA sequence

CCGCCGCGCCGTCGTTAGCACTTTCTTCTCTCTCGGCGCGTCCTCTGAGGTACGCAGTGCTTGGAGCTGGTTTTGCTGGCCTTTCGGTTACTTGGCATTTGTTGAAGCTCTGTCCTAAGGACATATCTCTATGTATCGACATATACGACGAAGTTGGCATTGGTGGAGGAGCATCTGGAGTCGCCGGAGGGCTTCTTCACCCTTATTCTCCTAAAGTTAAACCTCTCTGGAAAGGTGCCGAGTGTTGGGCTGAGTGCTTAAAGCTTTTAAGCGTTGCGGAGTCAGCAATTCCCTCCAAAGAGTTGGATGGATATCATAATATGAATGGATCCGTTGTTCTAAGACGGTCTGCTACTTCATTTCTTTTAGCTTCTGAGAGATATATATACTCATTCCCATCACTTGACATGCTTCTGCTGTATTTTGTTTACTTCAGGGGTATCTTGAGGCCTGCAATCAGCTTGAAGAATCTCATGATGTTAAAAGAAGTAATTATATCCTTAATGCTCAGAATGGACTCGATGGCTGCAGATGCTGCCCAGAATCTTGTTCCTAAGCTTAACATTCCTCTAAATACAGCTTTTTATATGCCTCAAGCTGTAAATATCAACTCTCAACGTTATCTTGAGGCGCTGTTTATAGCATGTCAAAATCTGACCAGGGAAACATCACCCTCAAGTCTTGGTCATAAGGAGTTGTTCTTGCAGAAAAAGTCTATTAACGAACTGGGTGAACTAGAAGGGACATACGATGCTGTGATTGTTTGTCTTGGTGCTAAAATGATCATGCTTCCTGAACTTACTGGAAAGCTTCCTTTGAGAACTTGCAGAGGTGTGGTAGCTCATTTTCAGCTTCCCGACGATATCAGCAATGCATACCCAGAGCTTGGGCCTTCTATACTGTCAGATGCATGGCTAGCCATACAGAGTCCTAGAAGTTTATATATGGGTTCAACATGGGAATGGAAATCAACAAATTCATCACCTGAAGTTTCAGAAGAGGAAGGCTCAAGGGCGGTTGCAGAACTCTTACCAAAGGTGTCTGCCATTTATCCCTCAATAAAGGAGTGGAGTTTCAGGAGAGCAAGGGCTGGTCTTAGAGCAATGCCACCACTCACTCCTCATGGATCTCTTCCTCTTATGGGTTGTATAGACGAGATTGTAAGACCTAACAGCTCTTGCAAGTACTGGTTATTTGGAGGGCTTGGTTCTAGGGGATTGTTGTACCATGGTTGGCTTGGGAAACTAACAGCACAGGCTGTGCTTTCATGTAAGGAAGAACTAATCCCATCTGAACTAATCTCTTGGAAGAAAGTAATGAATAGTTAA

Coding sequence (CDS)

ATGAATGGATCCGTTGTTCTAAGACGGTCTGCTACTTCATTTCTTTTAGCTTCTGAGAGATATATATACTCATTCCCATCACTTGACATGCTTCTGCTGTATTTTGTTTACTTCAGGGGTATCTTGAGGCCTGCAATCAGCTTGAAGAATCTCATGATGTTAAAAGAAGTAATTATATCCTTAATGCTCAGAATGGACTCGATGGCTGCAGATGCTGCCCAGAATCTTGTTCCTAAGCTTAACATTCCTCTAAATACAGCTTTTTATATGCCTCAAGCTGTAAATATCAACTCTCAACGTTATCTTGAGGCGCTGTTTATAGCATGTCAAAATCTGACCAGGGAAACATCACCCTCAAGTCTTGGTCATAAGGAGTTGTTCTTGCAGAAAAAGTCTATTAACGAACTGGGTGAACTAGAAGGGACATACGATGCTGTGATTGTTTGTCTTGGTGCTAAAATGATCATGCTTCCTGAACTTACTGGAAAGCTTCCTTTGAGAACTTGCAGAGGTGTGGTAGCTCATTTTCAGCTTCCCGACGATATCAGCAATGCATACCCAGAGCTTGGGCCTTCTATACTGTCAGATGCATGGCTAGCCATACAGAGTCCTAGAAGTTTATATATGGGTTCAACATGGGAATGGAAATCAACAAATTCATCACCTGAAGTTTCAGAAGAGGAAGGCTCAAGGGCGGTTGCAGAACTCTTACCAAAGGTGTCTGCCATTTATCCCTCAATAAAGGAGTGGAGTTTCAGGAGAGCAAGGGCTGGTCTTAGAGCAATGCCACCACTCACTCCTCATGGATCTCTTCCTCTTATGGGTTGTATAGACGAGATTGTAAGACCTAACAGCTCTTGCAAGTACTGGTTATTTGGAGGGCTTGGTTCTAGGGGATTGTTGTACCATGGTTGGCTTGGGAAACTAACAGCACAGGCTGTGCTTTCATGTAAGGAAGAACTAATCCCATCTGAACTAATCTCTTGGAAGAAAGTAATGAATAGTTAA

Protein sequence

MNGSVVLRRSATSFLLASERYIYSFPSLDMLLLYFVYFRGILRPAISLKNLMMLKEVIISLMLRMDSMAADAAQNLVPKLNIPLNTAFYMPQAVNINSQRYLEALFIACQNLTRETSPSSLGHKELFLQKKSINELGELEGTYDAVIVCLGAKMIMLPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWKSTNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGCIDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCKEELIPSELISWKKVMNS

Homology

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BLAST of Carg09974-RA vs. NCBI nr
Match: XP_022921836.1 (uncharacterized protein LOC111429976 [Cucurbita moschata])

HSP 1 Score: 563.1 bits (1450), Expect = 6.1e-157
Identity = 281/299 (93.98%), Postives = 289/299 (96.66%), Query Frame = 0


Query: 39  RGILRPAISLKNLMMLKEVIISLM--LRMDSMAADAAQNLVPKLNIPLNTAFYMPQAVNI 98
           RGILRPAISLKNLMMLKE   + +   R++++  DAAQNLVPKLNIPLNTAFYMPQAVNI
Sbjct: 127 RGILRPAISLKNLMMLKENAQNGLDSCRIETIDGDAAQNLVPKLNIPLNTAFYMPQAVNI 186

Query: 99  NSQRYLEALFIACQNLTRETSPSSLGHKELFLQKKSINELGELEGTYDAVIVCLGAKMIM 158
           N+QRYLEALFIACQNLT+ETSPSSLGHKELFLQKKSI ELGELEGTYDAVIVCLGAKMIM
Sbjct: 187 NAQRYLEALFIACQNLTKETSPSSLGHKELFLQKKSIKELGELEGTYDAVIVCLGAKMIM 246

Query: 159 LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK 218
           LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK
Sbjct: 247 LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK 306

Query: 219 STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC 278
           STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC
Sbjct: 307 STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC 366

Query: 279 IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCKEELIPSELISWKKVMNS 336
           IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCKEELIPSELISWKKVMNS
Sbjct: 367 IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCKEELIPSELISWKKVMNS 425

[Close]

BLAST of Carg09974-RA vs. NCBI nr
Match: XP_023516816.1 (uncharacterized protein LOC111780607 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 560.1 bits (1442), Expect = 5.2e-156
Identity = 280/299 (93.65%), Postives = 288/299 (96.32%), Query Frame = 0


Query: 39  RGILRPAISLKNLMMLKEVIISLM--LRMDSMAADAAQNLVPKLNIPLNTAFYMPQAVNI 98
           RGILRPAISLKNLMMLKE   + +   R++++  DAAQNLVPKLNIPLNTAFYMPQAVNI
Sbjct: 131 RGILRPAISLKNLMMLKENAQNGLDSCRIETIDGDAAQNLVPKLNIPLNTAFYMPQAVNI 190

Query: 99  NSQRYLEALFIACQNLTRETSPSSLGHKELFLQKKSINELGELEGTYDAVIVCLGAKMIM 158
           NSQRYLEALFIACQNLT+ETSPSSLGHKELFLQKKSINELGELEGTYDAVIVCLGAKMIM
Sbjct: 191 NSQRYLEALFIACQNLTKETSPSSLGHKELFLQKKSINELGELEGTYDAVIVCLGAKMIM 250

Query: 159 LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK 218
           LP+LTGKLPLRTCRGVVAHFQL DDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK
Sbjct: 251 LPQLTGKLPLRTCRGVVAHFQLHDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK 310

Query: 219 STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC 278
           STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC
Sbjct: 311 STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC 370

Query: 279 IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCKEELIPSELISWKKVMNS 336
           IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSC EELIPSELISWKKVMNS
Sbjct: 371 IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCNEELIPSELISWKKVMNS 429

[Close]

BLAST of Carg09974-RA vs. NCBI nr
Match: XP_022987509.1 (uncharacterized protein LOC111485051 isoform X1 [Cucurbita maxima])

HSP 1 Score: 558.5 bits (1438), Expect = 1.5e-155
Identity = 279/299 (93.31%), Postives = 288/299 (96.32%), Query Frame = 0


Query: 39  RGILRPAISLKNLMMLKEVIISLM--LRMDSMAADAAQNLVPKLNIPLNTAFYMPQAVNI 98
           RGILRPAISLKNLMMLKE   + +   R++++  DAA+NLVPKL IPLNTAFYMPQAVNI
Sbjct: 131 RGILRPAISLKNLMMLKENARNGLDSCRIETIDEDAARNLVPKLYIPLNTAFYMPQAVNI 190

Query: 99  NSQRYLEALFIACQNLTRETSPSSLGHKELFLQKKSINELGELEGTYDAVIVCLGAKMIM 158
           NSQRYLEALFIACQNLT+ETSPSSLGHKELFLQKKSIN+LGELEGTYDAVIVCLGAKMIM
Sbjct: 191 NSQRYLEALFIACQNLTKETSPSSLGHKELFLQKKSINDLGELEGTYDAVIVCLGAKMIM 250

Query: 159 LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK 218
           LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK
Sbjct: 251 LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK 310

Query: 219 STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC 278
           STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC
Sbjct: 311 STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC 370

Query: 279 IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCKEELIPSELISWKKVMNS 336
           IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSC EELIPSELISWKKVMNS
Sbjct: 371 IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCNEELIPSELISWKKVMNS 429

[Close]

BLAST of Carg09974-RA vs. NCBI nr
Match: XP_022987510.1 (uncharacterized protein LOC111485051 isoform X2 [Cucurbita maxima])

HSP 1 Score: 558.5 bits (1438), Expect = 1.5e-155
Identity = 279/299 (93.31%), Postives = 288/299 (96.32%), Query Frame = 0


Query: 39  RGILRPAISLKNLMMLKEVIISLM--LRMDSMAADAAQNLVPKLNIPLNTAFYMPQAVNI 98
           RGILRPAISLKNLMMLKE   + +   R++++  DAA+NLVPKL IPLNTAFYMPQAVNI
Sbjct: 15  RGILRPAISLKNLMMLKENARNGLDSCRIETIDEDAARNLVPKLYIPLNTAFYMPQAVNI 74

Query: 99  NSQRYLEALFIACQNLTRETSPSSLGHKELFLQKKSINELGELEGTYDAVIVCLGAKMIM 158
           NSQRYLEALFIACQNLT+ETSPSSLGHKELFLQKKSIN+LGELEGTYDAVIVCLGAKMIM
Sbjct: 75  NSQRYLEALFIACQNLTKETSPSSLGHKELFLQKKSINDLGELEGTYDAVIVCLGAKMIM 134

Query: 159 LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK 218
           LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK
Sbjct: 135 LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK 194

Query: 219 STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC 278
           STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC
Sbjct: 195 STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC 254

Query: 279 IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCKEELIPSELISWKKVMNS 336
           IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSC EELIPSELISWKKVMNS
Sbjct: 255 IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCNEELIPSELISWKKVMNS 313

[Close]

BLAST of Carg09974-RA vs. NCBI nr
Match: XP_004146732.1 (PREDICTED: uncharacterized protein LOC101203097 [Cucumis sativus] >KGN65223.1 hypothetical protein Csa_1G267190 [Cucumis sativus])

HSP 1 Score: 508.1 bits (1307), Expect = 2.3e-140
Identity = 252/299 (84.28%), Postives = 273/299 (91.30%), Query Frame = 0


Query: 39  RGILRPAISLKNLMMLKEVIISLM--LRMDSMAADAAQNLVPKLNIPLNTAFYMPQAVNI 98
           RGILRPAIS KNL++LKE   + +   R++++  DAA+NLVP+L +PLNTAFYMPQAVNI
Sbjct: 133 RGILRPAISSKNLVVLKENAQNGLDSCRIETIDEDAARNLVPELYVPLNTAFYMPQAVNI 192

Query: 99  NSQRYLEALFIACQNLTRETSPSSLGHKELFLQKKSINELGELEGTYDAVIVCLGAKMIM 158
           NSQRYLEALFIAC+NLT+ETS S  GHKEL+LQKKSI++L  LEGTYDAVIVCLGAKM+M
Sbjct: 193 NSQRYLEALFIACENLTKETSTSGFGHKELYLQKKSIDKLHGLEGTYDAVIVCLGAKMVM 252

Query: 159 LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK 218
           LPEL GKLPLRTCRGVVAHFQL DDISNAYP LGPSILSDAWLAI+ PRSLYMGSTWEWK
Sbjct: 253 LPELAGKLPLRTCRGVVAHFQLHDDISNAYPGLGPSILSDAWLAIRGPRSLYMGSTWEWK 312

Query: 219 STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC 278
           STNSSPEVSEEE SRAVAELLPKVSAIYPSIKEWSF RAR GLRAMPPLTPHGSLPLMGC
Sbjct: 313 STNSSPEVSEEESSRAVAELLPKVSAIYPSIKEWSFIRARGGLRAMPPLTPHGSLPLMGC 372

Query: 279 IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCKEELIPSELISWKKVMNS 336
           IDEIVR NSSCKYW+FGGLGSRGLLYHGWLGKLTAQAVLSC +ELIPSEL SWKK+MNS
Sbjct: 373 IDEIVRHNSSCKYWVFGGLGSRGLLYHGWLGKLTAQAVLSCNDELIPSELTSWKKIMNS 431

[Close]

BLAST of Carg09974-RA vs. TAIR10
Match: AT2G22650.1 (FAD-dependent oxidoreductase family protein)

HSP 1 Score: 362.1 bits (928), Expect = 3.8e-100
Identity = 173/300 (57.67%), Postives = 225/300 (75.00%), Query Frame = 0


Query: 34  YFVYFRGILRPAISLKNLMMLKEVIISLMLR--MDSMAADAAQNLVPKLNIPLNTAFYMP 93
           + V  RGILRPA + K L ++ +   + +    ++++  D AQNLVP L +PLN AFY P
Sbjct: 122 FMVRRRGILRPATNAKTLDLMSDNARNCLASCVVETIDKDGAQNLVPNLYLPLNCAFYFP 181

Query: 94  QAVNINSQRYLEALFIACQNLTRETSPSSLGHKELFLQKKSINELGELEGTYDAVIVCLG 153
            A+N+N  RYL+ALF+ACQ+    ++ +SLG K + L  KSI ++ ELEG YDAV++CLG
Sbjct: 182 GAMNVNPHRYLQALFLACQS----SAKTSLGRKNITLVNKSITDVLELEGGYDAVVICLG 241

Query: 154 AKMIMLPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGS 213
           +K+  LP LTGKLPLRTCRGV+ H QL +    +YP+ GPSILSDAWLA+Q PR+L+MGS
Sbjct: 242 SKVDFLPGLTGKLPLRTCRGVITHMQLHESARGSYPDDGPSILSDAWLAVQGPRNLHMGS 301

Query: 214 TWEWKSTNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSL 273
           TWEW+S N S +V  EE SRA+ ELLPK SA+YP I++W F  ARAGLRAMPP+T HGSL
Sbjct: 302 TWEWQSRNYSSDVPAEEASRALNELLPKASAVYPDIEKWEFAGARAGLRAMPPVTSHGSL 361

Query: 274 PLMGCIDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCKEELIPSELISWKK 332
           PL+GC+++++     C +W+F GLGSRGLLYH WLGKL ++AVLSC EEL+PSEL SWKK
Sbjct: 362 PLLGCVNQLIGAGQFCNFWVFSGLGSRGLLYHAWLGKLMSKAVLSCNEELLPSELTSWKK 417

[Close]

BLAST of Carg09974-RA vs. TrEMBL
Match: tr|A0A1S3B962|A0A1S3B962_CUCME (uncharacterized protein LOC103487376 OS=Cucumis melo OX=3656 GN=LOC103487376 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 1.5e-140
Identity = 251/299 (83.95%), Postives = 274/299 (91.64%), Query Frame = 0


Query: 39  RGILRPAISLKNLMMLKEVIISLM--LRMDSMAADAAQNLVPKLNIPLNTAFYMPQAVNI 98
           RGILRPAISLKNLM+LKE   + +   R++++   +A++LVP+L +PLNTAFYMPQAVNI
Sbjct: 131 RGILRPAISLKNLMVLKENARNGLDSCRIETIDEVSARDLVPELCVPLNTAFYMPQAVNI 190

Query: 99  NSQRYLEALFIACQNLTRETSPSSLGHKELFLQKKSINELGELEGTYDAVIVCLGAKMIM 158
           NSQRYLEALFIAC+NLT+ETS S  GHKEL+LQKKSIN+L ELEGTYDAVIVCLGAKM+M
Sbjct: 191 NSQRYLEALFIACENLTKETSTSGFGHKELYLQKKSINKLRELEGTYDAVIVCLGAKMVM 250

Query: 159 LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK 218
           LPELTGKLPLRTCRGVVAHFQL DDISNAYP LGPSILSDAWLAI+ PRSLYMGSTWEWK
Sbjct: 251 LPELTGKLPLRTCRGVVAHFQLHDDISNAYPGLGPSILSDAWLAIRGPRSLYMGSTWEWK 310

Query: 219 STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC 278
           STNSSPEVSEEE SRAVAELLPKVSAIYPSIKEWSF RAR GLRAMPPL PHGSLPLMGC
Sbjct: 311 STNSSPEVSEEESSRAVAELLPKVSAIYPSIKEWSFIRARGGLRAMPPLNPHGSLPLMGC 370

Query: 279 IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCKEELIPSELISWKKVMNS 336
           IDEI+R NSSCKYW+FGGLGSRGLLYHGWLGKLTAQAVL+C +ELIPSEL SWKK+MNS
Sbjct: 371 IDEIIRHNSSCKYWVFGGLGSRGLLYHGWLGKLTAQAVLTCNDELIPSELTSWKKIMNS 429

[Close]

BLAST of Carg09974-RA vs. TrEMBL
Match: tr|A0A0A0LTV2|A0A0A0LTV2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G267190 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 1.5e-140
Identity = 252/299 (84.28%), Postives = 273/299 (91.30%), Query Frame = 0


Query: 39  RGILRPAISLKNLMMLKEVIISLM--LRMDSMAADAAQNLVPKLNIPLNTAFYMPQAVNI 98
           RGILRPAIS KNL++LKE   + +   R++++  DAA+NLVP+L +PLNTAFYMPQAVNI
Sbjct: 133 RGILRPAISSKNLVVLKENAQNGLDSCRIETIDEDAARNLVPELYVPLNTAFYMPQAVNI 192

Query: 99  NSQRYLEALFIACQNLTRETSPSSLGHKELFLQKKSINELGELEGTYDAVIVCLGAKMIM 158
           NSQRYLEALFIAC+NLT+ETS S  GHKEL+LQKKSI++L  LEGTYDAVIVCLGAKM+M
Sbjct: 193 NSQRYLEALFIACENLTKETSTSGFGHKELYLQKKSIDKLHGLEGTYDAVIVCLGAKMVM 252

Query: 159 LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK 218
           LPEL GKLPLRTCRGVVAHFQL DDISNAYP LGPSILSDAWLAI+ PRSLYMGSTWEWK
Sbjct: 253 LPELAGKLPLRTCRGVVAHFQLHDDISNAYPGLGPSILSDAWLAIRGPRSLYMGSTWEWK 312

Query: 219 STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC 278
           STNSSPEVSEEE SRAVAELLPKVSAIYPSIKEWSF RAR GLRAMPPLTPHGSLPLMGC
Sbjct: 313 STNSSPEVSEEESSRAVAELLPKVSAIYPSIKEWSFIRARGGLRAMPPLTPHGSLPLMGC 372

Query: 279 IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCKEELIPSELISWKKVMNS 336
           IDEIVR NSSCKYW+FGGLGSRGLLYHGWLGKLTAQAVLSC +ELIPSEL SWKK+MNS
Sbjct: 373 IDEIVRHNSSCKYWVFGGLGSRGLLYHGWLGKLTAQAVLSCNDELIPSELTSWKKIMNS 431

[Close]

BLAST of Carg09974-RA vs. TrEMBL
Match: tr|W9RM12|W9RM12_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016657 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.6e-119
Identity = 206/296 (69.59%), Postives = 248/296 (83.78%), Query Frame = 0


Query: 39  RGILRPAISLKNLMMLKEVIIS---LMLRMDSMAADAAQNLVPKLNIPLNTAFYMPQAVN 98
           RGILRPA+S+KNL++L +VI+S   +  R++++  +AAQNLVP L +P NTAF+MPQAVN
Sbjct: 138 RGILRPAVSMKNLLLLSDVILSELNVSTRIETIDKEAAQNLVPDLCVPFNTAFHMPQAVN 197

Query: 99  INSQRYLEALFIACQNLTRETSPSSLGHKELFLQKKSINELGELEGTYDAVIVCLGAKMI 158
           I+ QRYL+AL++AC+NL +E S S +G KEL L KKS++++ +LEG Y AVI+CLGAK  
Sbjct: 198 IHPQRYLQALYVACENLVKEQSSSGIGEKELHLHKKSVHKILDLEGEYQAVIICLGAKAD 257

Query: 159 MLPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEW 218
           MLPEL G++PLRTCRGVVAH +LPDDI   YPELGPSILSDAWLAIQ PRSLYMGSTWEW
Sbjct: 258 MLPELAGRIPLRTCRGVVAHLKLPDDIREEYPELGPSILSDAWLAIQGPRSLYMGSTWEW 317

Query: 219 KSTNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMG 278
           KS NSSP VS  E S+A+ ELLPK  AIYP +K W+F  ARAGLRAMPPLTPHGSLPL+G
Sbjct: 318 KSRNSSPNVSTSEASKALEELLPKAYAIYPDLKNWTFTTARAGLRAMPPLTPHGSLPLLG 377

Query: 279 CIDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCKEELIPSELISWKK 332
           C+++IV  N+ CKYWLFGGLG+RGLLYHGWLGKL AQAVL+C E+LIPSEL SWKK
Sbjct: 378 CVNDIVGENNGCKYWLFGGLGARGLLYHGWLGKLMAQAVLACNEQLIPSELTSWKK 433

[Close]

BLAST of Carg09974-RA vs. TrEMBL
Match: tr|A0A2P5E6V1|A0A2P5E6V1_9ROSA (FAD dependent oxidoreductase OS=Trema orientalis OX=63057 GN=TorRG33x02_229110 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 3.3e-114
Identity = 198/295 (67.12%), Postives = 242/295 (82.03%), Query Frame = 0


Query: 39  RGILRPAISLKNLMMLKEVIISLM--LRMDSMAADAAQNLVPKLNIPLNTAFYMPQAVNI 98
           RGILRPA+S+KNL++L +   + +   R++++  DAAQN+VP L +PLN AFYMPQA+NI
Sbjct: 135 RGILRPAVSMKNLLLLSDNARNCLPRCRIETLDEDAAQNIVPNLRLPLNKAFYMPQALNI 194

Query: 99  NSQRYLEALFIACQNLTRETSPSSLGHKELFLQKKSINELGELEGTYDAVIVCLGAKMIM 158
           + +RY++AL++AC+NL +E S SS+G KEL L KK++++L +LEG Y AVI+CLGAK  M
Sbjct: 195 HPKRYVQALYLACKNLAKELSTSSVGEKELHLHKKNVHKLVDLEGEYQAVIICLGAKADM 254

Query: 159 LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK 218
           LPEL G++PLRTCRGVVAH +L DDI   YPELGPSILSDAWLAIQ PRSLYMGSTWEWK
Sbjct: 255 LPELAGRIPLRTCRGVVAHLKLLDDIGEEYPELGPSILSDAWLAIQGPRSLYMGSTWEWK 314

Query: 219 STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC 278
           S NSSP VS  E S+A+ ELLPK  A+YP +K W+F  ARAGLRAMPPLTPHGSLPL+GC
Sbjct: 315 SRNSSPNVSTSEASQALEELLPKAYAVYPDLKNWTFAGARAGLRAMPPLTPHGSLPLLGC 374

Query: 279 IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCKEELIPSELISWKK 332
           +D+IV  +  CKYWLF GLG+RGLLYH WLGKL AQAVL+C E+LIPSELISW K
Sbjct: 375 VDDIVGESMGCKYWLFAGLGARGLLYHSWLGKLMAQAVLACNEQLIPSELISWNK 429

[Close]

BLAST of Carg09974-RA vs. TrEMBL
Match: tr|A0A2P5D1E7|A0A2P5D1E7_PARAD (FAD dependent oxidoreductase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_104840 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.3e-112
Identity = 196/293 (66.89%), Postives = 238/293 (81.23%), Query Frame = 0


Query: 39  RGILRPAISLKNLMMLKEVIISLM--LRMDSMAADAAQNLVPKLNIPLNTAFYMPQAVNI 98
           RG+LRPA+S+K+L++L +   + +   R++++  DAAQN+VP L +PLN AFYMPQA+NI
Sbjct: 134 RGVLRPAVSMKDLLLLSDNARNCLPSCRIETLDEDAAQNIVPNLRLPLNKAFYMPQALNI 193

Query: 99  NSQRYLEALFIACQNLTRETSPSSLGHKELFLQKKSINELGELEGTYDAVIVCLGAKMIM 158
             +RY++AL++AC+NL +E S S +G KEL L KK++++L +LEG Y AVI+CLGAK  M
Sbjct: 194 LPKRYVQALYLACKNLAKELSTSGVGEKELHLHKKNVHKLVDLEGEYQAVIICLGAKADM 253

Query: 159 LPELTGKLPLRTCRGVVAHFQLPDDISNAYPELGPSILSDAWLAIQSPRSLYMGSTWEWK 218
           LPEL GK+PLRTCRGVVAH +L DDI   YPELGPSILSDAWLAIQ PRSLYMGSTWEWK
Sbjct: 254 LPELAGKIPLRTCRGVVAHLKLLDDIGEEYPELGPSILSDAWLAIQGPRSLYMGSTWEWK 313

Query: 219 STNSSPEVSEEEGSRAVAELLPKVSAIYPSIKEWSFRRARAGLRAMPPLTPHGSLPLMGC 278
           S NSSP VS  E S+A+ ELLPK  AIYP +K W+F  ARAGLRAMPPLTPHGSLPL+GC
Sbjct: 314 SRNSSPNVSTSEASQALEELLPKAYAIYPDLKNWTFTGARAGLRAMPPLTPHGSLPLLGC 373

Query: 279 IDEIVRPNSSCKYWLFGGLGSRGLLYHGWLGKLTAQAVLSCKEELIPSELISW 330
           +DEIV  +  CKYWLF GLG+RGLLYH WLGKL AQAVL+C E+LIPSEL SW
Sbjct: 374 VDEIVGESMGCKYWLFAGLGARGLLYHSWLGKLMAQAVLACNEQLIPSELTSW 426

The following BLAST results are available for this feature:

BLAST of Carg09974-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921836.1	6.1e-157	93.98	uncharacterized protein LOC111429976 [Cucurbita moschata]	[more]
XP_023516816.1	5.2e-156	93.65	uncharacterized protein LOC111780607 [Cucurbita pepo subsp. pepo]	[more]
XP_022987509.1	1.5e-155	93.31	uncharacterized protein LOC111485051 isoform X1 [Cucurbita maxima]	[more]
XP_022987510.1	1.5e-155	93.31	uncharacterized protein LOC111485051 isoform X2 [Cucurbita maxima]	[more]
XP_004146732.1	2.3e-140	84.28	PREDICTED: uncharacterized protein LOC101203097 [Cucumis sativus] >KGN65223.1 hy...	[more]

BLAST of Carg09974-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G22650.1	3.8e-100	57.67	FAD-dependent oxidoreductase family protein	[more]

BLAST of Carg09974-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg09974-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B962\|A0A1S3B962_CUCME	1.5e-140	83.95	uncharacterized protein LOC103487376 OS=Cucumis melo OX=3656 GN=LOC103487376 PE=...	[more]
tr\|A0A0A0LTV2\|A0A0A0LTV2_CUCSA	1.5e-140	84.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G267190 PE=4 SV=1	[more]
tr\|W9RM12\|W9RM12_9ROSA	2.6e-119	69.59	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016657 PE=4 SV=1	[more]
tr\|A0A2P5E6V1\|A0A2P5E6V1_9ROSA	3.3e-114	67.12	FAD dependent oxidoreductase OS=Trema orientalis OX=63057 GN=TorRG33x02_229110 P...	[more]
tr\|A0A2P5D1E7\|A0A2P5D1E7_PARAD	2.3e-112	66.89	FAD dependent oxidoreductase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_1048...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR006076	FAD-dep_OxRdtase
IPR036188	FAD/NAD-bd_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016491	oxidoreductase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg09974	Carg09974	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg09974-RA	Carg09974-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09974-RA.exon.1	Carg09974-RA.exon.1	exon
Carg09974-RA.exon.2	Carg09974-RA.exon.2	exon
Carg09974-RA.exon.3	Carg09974-RA.exon.3	exon
Carg09974-RA.exon.4	Carg09974-RA.exon.4	exon
Carg09974-RA.exon.5	Carg09974-RA.exon.5	exon
Carg09974-RA.exon.6	Carg09974-RA.exon.6	exon
Carg09974-RA.exon.7	Carg09974-RA.exon.7	exon
Carg09974-RA.exon.8	Carg09974-RA.exon.8	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09974-RA.five_prime_UTR.1	Carg09974-RA.five_prime_UTR.1	five_prime_UTR
Carg09974-RA.five_prime_UTR.2	Carg09974-RA.five_prime_UTR.2	five_prime_UTR
Carg09974-RA.five_prime_UTR.3	Carg09974-RA.five_prime_UTR.3	five_prime_UTR
Carg09974-RA.five_prime_UTR.4	Carg09974-RA.five_prime_UTR.4	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09974-RA.CDS.1	Carg09974-RA.CDS.1	CDS
Carg09974-RA.CDS.2	Carg09974-RA.CDS.2	CDS
Carg09974-RA.CDS.3	Carg09974-RA.CDS.3	CDS
Carg09974-RA.CDS.4	Carg09974-RA.CDS.4	CDS
Carg09974-RA.CDS.5	Carg09974-RA.CDS.5	CDS

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	G3DSA:3.50.50.60		coord: 96..168 e-value: 5.0E-7 score: 31.2 coord: 271..316 e-value: 5.0E-7 score: 31.2
None	No IPR available	GENE3D	G3DSA:3.30.9.10		coord: 62..95 e-value: 5.0E-7 score: 31.2 coord: 169..270 e-value: 5.0E-7 score: 31.2
None	No IPR available	PANTHER	PTHR13847:SF248	FAD-DEPENDENT OXIDOREDUCTASE-LIKE PROTEIN	coord: 35..333
None	No IPR available	PANTHER	PTHR13847	FAD NAD BINDING OXIDOREDUCTASES	coord: 35..333
None	No IPR available	SUPERFAMILY	SSF51971	Nucleotide-binding domain	coord: 39..179 coord: 249..317
IPR006076	FAD dependent oxidoreductase	PFAM	PF01266	DAO	coord: 71..312 e-value: 1.6E-16 score: 60.8