Carg09515-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09515-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Plant cadmium resistance protein
Location	Cucurbita_argyrosperma_scaffold_029 : 599903 .. 602472 (-)
Sequence length	522

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGAAGCACAGGTAGTACTGGTTATGGTGGCAATACACAACAGGATCAACCTGGGTTCGCAGGTCCAAGCATGTACCAACCAAATACAGGTAGCCCACCTAATAATTTTACACAATATGCTGAACCTGAGCTCCCAGGTCCAACTATGTATCAAGCTAATGCAGTCCGTGGGACTGTTTGGAGCTCTGGATTGTTTGATTGCCATGAAGATGAGACTAATGGTTAGTTTTTGCTTTCGATTTTGTAACGATTTAGTCCATATCGTGAAAGTATTGGATTGATACTCGAAAATTGTTGTCTGGTAGCATATGATCTGAAGATCCCAATTATTTGAGATGTCTTTGGAGCTGTTCTTTTACACATTAGTTTCTGTTTGACAGCGGTCATGACAGCATTCCTTCCATGCGTGACATTTGGACAGATTGCAGAAGTAATGGATCAAGGAGAAATGAGTAAGGCCTTCTTTTAACCTTGAGGTTGCGTGAGATCTCGCGTCTATTGGAGAGAGAAACAAAGCATTCTTATTAAGGATGTGGAAACTTTTTCCTAGTATCTATAAGGCCAACGGCGATACGTAATTGGTCAAAGTGGATAGTATCTGCTAGCAGTAGGCTTGTGCCAATGAGGAGGCTGGGCCCTTAAAGGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAAGGGAACGAAGCATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGCAAAAGCGATATGTAACGGGTCAGAGCGGACAATTCATTTCGTACCTTCCATTTGTGTTAAAAGTTAAATGAAGGTGTTGTATGTTGCTGATATGTTTGTGATACTGATTGCAGCATGTCCTTTGGGGAGTCTTATATATGCTCTGATGATGCCTGCTTTGTGCTCTCAATGGGTGATGGGGTCAAGCTACAGAAAAAGACTGAGAGAGAGATATAATTTGGTAGAAGCTCCATACACTGATATCATTTCCCATGTGTTCTGCCCATGTTGTTCACTTTGCCAAGAGTTCAGAGAGCTCCGCAAGAGAGGACTTGACCCATCCTTAGGTACTTATCATTCTTTCAATTTCATTTATGAACTGTATAGCTCGTTCAGGAACTTTGTTAAGCATTAGCAAACATCAGTTTTGCTCCCCATGATATATGGCCTCTCGATCTCACATTGGTTAGGGAGGAGAACGAAACATTCTTTATTAGGGTGTGAAAACCTCTCCCTAGTAGACGCGTTTTAAAAACTTTGGGTGGAAGTCTGGAAGGAAAAGCCCAAAGAGGACAATATTTGTTATCCGTGGGCTTGGGCTGTTACAATTGGTATGAGAGCTAGTCACTGGACAGTGTGCCAATGAGGATGCTGAGCTCAAAAGGGGGTGGACACGAAGCGATGTGCCAGCGAGGACACTGGACCCTGGAAAGGGGTGAATCGTGAGATCCCAGCTGAGCTTAGAAGGGGGTGGACACCAAGCGGTGTGCCAGCGAGGACACTGGGCCCTGGAAATGAGTGAATCGTGAGATCCCAGCTGAGTCCAAAAGGGGGTGGACACCGAGCGGTGTGCCAGTGAGGACACTAGGCCCCGGAAAGGGGTGAATCGTGAGATCCCAGCTGAGCCTAGAAGGGGGTGGACACCGACCGAGCGGTGTGCCAACGAGGACACTAGGCCTCGGAGAAGGAGGAGGGGGGTGGACACCGACCGAGCGGTGTGCCAACGAGGACACTAGGCCCCGGAAAGGGGTGAATCGTGAGATCCCAGCTGAGCCCAGAAGGGGGTGGACACTGAGCGGTGTGCCGAGTAGAGGAATCGTGACTGGGAAGGGGGTGGACACCGAAAGGGTGTGTGAATCGTGAGATCCCAGCTGAGCCCAGAAGGGGGTGGACACTGAGCAGTGAGGACACTTGAATCGTGAGAGAGAAAATGAGTGCTAGCGAGGACGCTGGGCCCTGAAGGGGGGCGGATCGTGAGATCCCACGTCGATTGGAGCGAGGAACGAGTGTTAGCAAGGACGTTGGGCTCTAAAGGGGGGTGGATGGTGAGATGCCACATCGGTTGGGAAGGGGGAAGCATTCTTTATAAGGTTGTGGAAACCTCTCCCTAGCTGACACGTTTTAGAAACCATGAGGGGAAGCCCGAAAGGAAAAGTCTAAAGAAGACAATATATGCTAACGGTGGACTTAGGCTGTCACAAAAACTCTGTTCGTTTCTTCTCTTTGTCATTGGGACTTTGAAGGCTACCATGATATGCAAAGTTCATTCGTAAATGAATCTTACAAATCACCTCTACCAACTACCAAGTAGCTCAGCTTAATAGCTTACAACAGGGACATGTTTCGAAGTGGTTTAAAACATGACAAAAGTGATTTTAAACGTTTTATAATCACTCCCAAAACATGTCCTAACAGTTAAACTTGTGTCATGTAGCAGTTGTGTCGAGATGTGAGCTATAACTTACGAATGATTATGTCTATCCAACATGTTACGTACAGGATGGAATGGAATTTTAGCTCAAAGACAGGCAGCACAACACGAGACAGTGGAAGTTCCTCCTCCAAGACAAACCATGTTTTAA

mRNA sequence

ATGGATAGAAGCACAGGTAGTACTGGTTATGGTGGCAATACACAACAGGATCAACCTGGGTTCGCAGGTCCAAGCATGTACCAACCAAATACAGGTAGCCCACCTAATAATTTTACACAATATGCTGAACCTGAGCTCCCAGGTCCAACTATGTATCAAGCTAATGCAGTCCGTGGGACTGTTTGGAGCTCTGGATTGTTTGATTGCCATGAAGATGAGACTAATGCATGTCCTTTGGGGAGTCTTATATATGCTCTGATGATGCCTGCTTTGTGCTCTCAATGGGTGATGGGGTCAAGCTACAGAAAAAGACTGAGAGAGAGATATAATTTGGTAGAAGCTCCATACACTGATATCATTTCCCATGTGTTCTGCCCATGTTGTTCACTTTGCCAAGAGTTCAGAGAGCTCCGCAAGAGAGGACTTGACCCATCCTTAGGATGGAATGGAATTTTAGCTCAAAGACAGGCAGCACAACACGAGACAGTGGAAGTTCCTCCTCCAAGACAAACCATGTTTTAA

Coding sequence (CDS)

ATGGATAGAAGCACAGGTAGTACTGGTTATGGTGGCAATACACAACAGGATCAACCTGGGTTCGCAGGTCCAAGCATGTACCAACCAAATACAGGTAGCCCACCTAATAATTTTACACAATATGCTGAACCTGAGCTCCCAGGTCCAACTATGTATCAAGCTAATGCAGTCCGTGGGACTGTTTGGAGCTCTGGATTGTTTGATTGCCATGAAGATGAGACTAATGCATGTCCTTTGGGGAGTCTTATATATGCTCTGATGATGCCTGCTTTGTGCTCTCAATGGGTGATGGGGTCAAGCTACAGAAAAAGACTGAGAGAGAGATATAATTTGGTAGAAGCTCCATACACTGATATCATTTCCCATGTGTTCTGCCCATGTTGTTCACTTTGCCAAGAGTTCAGAGAGCTCCGCAAGAGAGGACTTGACCCATCCTTAGGATGGAATGGAATTTTAGCTCAAAGACAGGCAGCACAACACGAGACAGTGGAAGTTCCTCCTCCAAGACAAACCATGTTTTAA

Protein sequence

MDRSTGSTGYGGNTQQDQPGFAGPSMYQPNTGSPPNNFTQYAEPELPGPTMYQANAVRGTVWSSGLFDCHEDETNACPLGSLIYALMMPALCSQWVMGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQAAQHETVEVPPPRQTMF

Homology

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BLAST of Carg09515-RA vs. NCBI nr
Match: XP_022953977.1 (protein PLANT CADMIUM RESISTANCE 8 [Cucurbita moschata])

HSP 1 Score: 317.8 bits (813), Expect = 2.3e-83
Identity = 173/197 (87.82%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 1   MDRSTGSTGYGGNTQQDQPGFAGPSMYQPNTGSPPNNFXXXXXXXXXXXXXXXXXAVRGT 60
           MDRSTGSTGYGGNTQQDQPGFAGPSMYQPNTGSPPNNFXXXXXXXXXXXXXXXXXAVRGT
Sbjct: 1   MDRSTGSTGYGGNTQQDQPGFAGPSMYQPNTGSPPNNFXXXXXXXXXXXXXXXXXAVRGT 60

Query: 61  VWSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCSQWV 120
           VWSSGLFDCHEDETNA                        CPLGSLIYALMMPALCSQWV
Sbjct: 61  VWSSGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGEMTCPLGSLIYALMMPALCSQWV 120

Query: 121 MGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQ 174
           MGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQ
Sbjct: 121 MGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQ 180

[Close]

BLAST of Carg09515-RA vs. NCBI nr
Match: XP_023548895.1 (protein PLANT CADMIUM RESISTANCE 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.0 bits (798), Expect = 1.3e-81
Identity = 170/197 (86.29%), Postives = 171/197 (86.80%), Query Frame = 0


Query: 1   MDRSTGSTGYGGNTQQDQPGFAGPSMYQPNTGSPPNNFXXXXXXXXXXXXXXXXXAVRGT 60
           MDRSTGSTGYGGNTQQDQPGFAGPSMYQPNTGSPPNN XXXXXXXXXXXXXXXXX VRGT
Sbjct: 84  MDRSTGSTGYGGNTQQDQPGFAGPSMYQPNTGSPPNNXXXXXXXXXXXXXXXXXXXVRGT 143

Query: 61  VWSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCSQWV 120
           VWSSGLFDCHEDETNA                        CPLGSLIYALMMPALCSQWV
Sbjct: 144 VWSSGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGEMTCPLGSLIYALMMPALCSQWV 203

Query: 121 MGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQ 174
           MGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQ+Q
Sbjct: 204 MGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQKQ 263

[Close]

BLAST of Carg09515-RA vs. NCBI nr
Match: XP_022992370.1 (protein PLANT CADMIUM RESISTANCE 8 [Cucurbita maxima])

HSP 1 Score: 307.8 bits (787), Expect = 2.4e-80
Identity = 168/197 (85.28%), Postives = 170/197 (86.29%), Query Frame = 0


Query: 1   MDRSTGSTGYGGNTQQDQPGFAGPSMYQPNTGSPPNNFXXXXXXXXXXXXXXXXXAVRGT 60
           MDRSTGSTGYGGNTQQDQPGFAGPSMYQPNTGSP NN XXXXXXXXXXXXXXXXX VRGT
Sbjct: 55  MDRSTGSTGYGGNTQQDQPGFAGPSMYQPNTGSPANNXXXXXXXXXXXXXXXXXXXVRGT 114

Query: 61  VWSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCSQWV 120
           VWSSGLFDCHEDETNA                        CPLGSLIYALMMPALCSQW+
Sbjct: 115 VWSSGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGEMTCPLGSLIYALMMPALCSQWL 174

Query: 121 MGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQ 174
           MGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQ
Sbjct: 175 MGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQ 234

[Close]

BLAST of Carg09515-RA vs. NCBI nr
Match: XP_008452303.1 (PREDICTED: protein PLANT CADMIUM RESISTANCE 8 [Cucumis melo])

HSP 1 Score: 248.8 bits (634), Expect = 1.3e-62
Identity = 143/200 (71.50%), Postives = 154/200 (77.00%), Query Frame = 0


Query: 1   MDRSTGSTGYGGNTQQDQPGFAGPSMYQPNTGS---PPNNFXXXXXXXXXXXXXXXXXAV 60
           MDRS+ + GYGG TQ  QPGF+GP MY+ NTG+        XXXXXXXXXXXXXXXXX  
Sbjct: 1   MDRSS-ANGYGGTTQSAQPGFSGPRMYEANTGNXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  RGTVWSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCS 120
           RG VWS+GLFDCHEDETNA                        CPLGSLIYALMMPALCS
Sbjct: 61  RGNVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCS 120

Query: 121 QWVMGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILA 174
           QW+MGS YR RLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDP+LGWNGILA
Sbjct: 121 QWLMGSKYRTRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILA 180

[Close]

BLAST of Carg09515-RA vs. NCBI nr
Match: XP_011650553.1 (PREDICTED: protein PLANT CADMIUM RESISTANCE 8 [Cucumis sativus] >KGN56202.1 hypothetical protein Csa_3G099630 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 5.0e-62
Identity = 143/200 (71.50%), Postives = 153/200 (76.50%), Query Frame = 0


Query: 1   MDRSTGSTGYGGNTQQDQPGFAGPSMYQPNTGS---PPNNFXXXXXXXXXXXXXXXXXAV 60
           MDRS+ + GYGG TQ  Q GF+GP MY+ NTG+        XXXXXXXXXXXXXXXXX  
Sbjct: 1   MDRSS-ANGYGGTTQSAQHGFSGPRMYEANTGNXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  RGTVWSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCS 120
           RG VWS+GLFDCHEDETNA                        CPLGSLIYALMMPALCS
Sbjct: 61  RGNVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCS 120

Query: 121 QWVMGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILA 174
           QW+MGS YR RLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDP+LGWNGILA
Sbjct: 121 QWLMGSKYRTRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILA 180

[Close]

BLAST of Carg09515-RA vs. TAIR10
Match: AT1G52200.1 (PLAC8 family protein)

HSP 1 Score: 157.1 bits (396), Expect = 9.5e-39
Identity = 74/139 (53.24%), Postives = 87/139 (62.59%), Query Frame = 0


Query: 59  GTVWSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCSQ 118
           G  WS+GLFDC  D+ NA                        CPLG+ +Y LMMPALCS 
Sbjct: 50  GRPWSTGLFDCQADQANAVLTTIVPCVTFGQIAEVMDEGEMTCPLGTFMYLLMMPALCSH 109

Query: 119 WVMGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQ 173
           WVMGS YR+++R ++NLVEAPY+D  SHV CPCCSLCQE+REL+ R LDPSLGWNGILAQ
Sbjct: 110 WVMGSKYREKMRRKFNLVEAPYSDCASHVLCPCCSLCQEYRELKIRNLDPSLGWNGILAQ 169

[Close]

BLAST of Carg09515-RA vs. TAIR10
Match: AT1G49030.1 (PLAC8 family protein)

HSP 1 Score: 98.2 bits (243), Expect = 5.2e-21
Identity = 48/135 (35.56%), Postives = 68/135 (50.37%), Query Frame = 0


Query: 62  WSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCSQWVM 121
           W+SGLFDC  D  NA                        C    ++Y L+        V 
Sbjct: 88  WTSGLFDCMNDGENALITCCFPFVTFGQIAEVIDEGATSCGTAGMLYGLICCLFAIPCVY 147

Query: 122 GSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQA 173
             ++R +LR +Y L +AP  D I+H FC  C+LCQE+REL+ RGLDPS+GW G + +++ 
Sbjct: 148 TCTFRTKLRSKYGLPDAPAPDWITHCFCEYCALCQEYRELKNRGLDPSIGWIGNVQKQRM 207

[Close]

BLAST of Carg09515-RA vs. TAIR10
Match: AT3G18470.1 (PLAC8 family protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-18
Identity = 46/135 (34.07%), Postives = 66/135 (48.89%), Query Frame = 0


Query: 62  WSSGLFDCHEDETNAC--------PLG----------------SLIYALMMPALCSQWVM 121
           W+SGLF C ED   AC          G                 + Y L+   +    + 
Sbjct: 5   WTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGLICCVVGLPCLF 64

Query: 122 GSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQA 173
             +YR ++R ++ L E+P +D ++H FC CC+LCQE REL+ RGLDPS+GW+G + +  A
Sbjct: 65  SCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTRGLDPSIGWSGNMQRTMA 124

[Close]

BLAST of Carg09515-RA vs. TAIR10
Match: AT3G18460.1 (PLAC8 family protein)

HSP 1 Score: 87.8 bits (216), Expect = 7.1e-18
Identity = 47/136 (34.56%), Postives = 67/136 (49.26%), Query Frame = 0


Query: 61  VWSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCSQWV 120
           +WSS LFDC  D  NA                        C  G L+Y ++   +   +V
Sbjct: 53  LWSSDLFDCMNDSENAVITCLAPCVTLGQIAEIVDEGATPCATGGLLYGMIF-FIGVPFV 112

Query: 121 MGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQ 173
               +R ++R +Y L +AP  D I+H+FC  C+LCQE+REL+ RG DP++GW G +  +Q
Sbjct: 113 YSCMFRAKMRNKYGLPDAPAPDWITHLFCEHCALCQEYRELKHRGFDPNIGWAGNVQAQQ 172

[Close]

BLAST of Carg09515-RA vs. TAIR10
Match: AT1G58320.1 (PLAC8 family protein)

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-15
Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 0


Query: 62  WSSGLFDCHEDETNAC---------PLGSL------------IYALMMPALCS---QWVM 121
           W++GL+DC  ++ + C           G +            +  LM+ A+ S    W  
Sbjct: 17  WTTGLYDCLSEDISTCCFTWVCPCVAFGRIAEILDKGETSRGLAGLMVVAMSSIGCGWYY 76

Query: 122 GSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWN 150
            S YR +LR +Y L EAP  D   H FC  C+L QE REL+ RGLDPSLGWN
Sbjct: 77  ASKYRAKLRHQYALPEAPCADGAIHCFCCPCALTQEHRELKHRGLDPSLGWN 128

[Close]

BLAST of Carg09515-RA vs. Swiss-Prot
Match: sp|Q9M815|PCR8_ARATH (Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana OX=3702 GN=PCR8 PE=1 SV=2)

HSP 1 Score: 157.1 bits (396), Expect = 1.7e-37
Identity = 74/139 (53.24%), Postives = 87/139 (62.59%), Query Frame = 0


Query: 59  GTVWSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCSQ 118
           G  WS+GLFDC  D+ NA                        CPLG+ +Y LMMPALCS 
Sbjct: 50  GRPWSTGLFDCQADQANAVLTTIVPCVTFGQIAEVMDEGEMTCPLGTFMYLLMMPALCSH 109

Query: 119 WVMGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQ 173
           WVMGS YR+++R ++NLVEAPY+D  SHV CPCCSLCQE+REL+ R LDPSLGWNGILAQ
Sbjct: 110 WVMGSKYREKMRRKFNLVEAPYSDCASHVLCPCCSLCQEYRELKIRNLDPSLGWNGILAQ 169

[Close]

BLAST of Carg09515-RA vs. Swiss-Prot
Match: sp|Q9M9A5|PCR6_ARATH (Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=PCR6 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.4e-20
Identity = 48/135 (35.56%), Postives = 68/135 (50.37%), Query Frame = 0


Query: 62  WSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCSQWVM 121
           W+SGLFDC  D  NA                        C    ++Y L+        V 
Sbjct: 88  WTSGLFDCMNDGENALITCCFPFVTFGQIAEVIDEGATSCGTAGMLYGLICCLFAIPCVY 147

Query: 122 GSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQA 173
             ++R +LR +Y L +AP  D I+H FC  C+LCQE+REL+ RGLDPS+GW G + +++ 
Sbjct: 148 TCTFRTKLRSKYGLPDAPAPDWITHCFCEYCALCQEYRELKNRGLDPSIGWIGNVQKQRM 207

[Close]

BLAST of Carg09515-RA vs. Swiss-Prot
Match: sp|Q9LS43|PCR7_ARATH (Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana OX=3702 GN=PCR7 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.4e-17
Identity = 46/135 (34.07%), Postives = 66/135 (48.89%), Query Frame = 0


Query: 62  WSSGLFDCHEDETNAC--------PLG----------------SLIYALMMPALCSQWVM 121
           W+SGLF C ED   AC          G                 + Y L+   +    + 
Sbjct: 5   WTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGLICCVVGLPCLF 64

Query: 122 GSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQA 173
             +YR ++R ++ L E+P +D ++H FC CC+LCQE REL+ RGLDPS+GW+G + +  A
Sbjct: 65  SCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTRGLDPSIGWSGNMQRTMA 124

[Close]

BLAST of Carg09515-RA vs. Swiss-Prot
Match: sp|Q9LS44|PCR4_ARATH (Protein PLANT CADMIUM RESISTANCE 4 OS=Arabidopsis thaliana OX=3702 GN=PCR4 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-16
Identity = 47/136 (34.56%), Postives = 67/136 (49.26%), Query Frame = 0


Query: 61  VWSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCSQWV 120
           +WSS LFDC  D  NA                        C  G L+Y ++   +   +V
Sbjct: 53  LWSSDLFDCMNDSENAVITCLAPCVTLGQIAEIVDEGATPCATGGLLYGMIF-FIGVPFV 112

Query: 121 MGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQ 173
               +R ++R +Y L +AP  D I+H+FC  C+LCQE+REL+ RG DP++GW G +  +Q
Sbjct: 113 YSCMFRAKMRNKYGLPDAPAPDWITHLFCEHCALCQEYRELKHRGFDPNIGWAGNVQAQQ 172

[Close]

BLAST of Carg09515-RA vs. Swiss-Prot
Match: sp|Q9LS45|PCR5_ARATH (Protein PLANT CADMIUM RESISTANCE 5 OS=Arabidopsis thaliana OX=3702 GN=PCR5 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.5e-14
Identity = 46/135 (34.07%), Postives = 63/135 (46.67%), Query Frame = 0


Query: 62  WSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCSQWVM 121
           WSS LFDC  D  NA                        C    L+Y  +     S +V 
Sbjct: 52  WSSQLFDCMNDSENAVITLIAPCVTFGQIAEIVDEGATPCATAGLLYGALFFTGAS-FVY 111

Query: 122 GSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQRQA 173
              +R R+R+++ L +AP  D I+H+ C   +LCQE+REL+  G DP LGW G +   Q 
Sbjct: 112 SYMFRARIRKKFGLPDAPAPDWITHLVCMPFALCQEYRELKHHGFDPILGWAGNV---QQ 171

[Close]

BLAST of Carg09515-RA vs. TrEMBL
Match: tr|A0A1S3BUC2|A0A1S3BUC2_CUCME (protein PLANT CADMIUM RESISTANCE 8 OS=Cucumis melo OX=3656 GN=LOC103493369 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 8.7e-63
Identity = 143/200 (71.50%), Postives = 154/200 (77.00%), Query Frame = 0


Query: 1   MDRSTGSTGYGGNTQQDQPGFAGPSMYQPNTGS---PPNNFXXXXXXXXXXXXXXXXXAV 60
           MDRS+ + GYGG TQ  QPGF+GP MY+ NTG+        XXXXXXXXXXXXXXXXX  
Sbjct: 1   MDRSS-ANGYGGTTQSAQPGFSGPRMYEANTGNXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  RGTVWSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCS 120
           RG VWS+GLFDCHEDETNA                        CPLGSLIYALMMPALCS
Sbjct: 61  RGNVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCS 120

Query: 121 QWVMGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILA 174
           QW+MGS YR RLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDP+LGWNGILA
Sbjct: 121 QWLMGSKYRTRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILA 180

[Close]

BLAST of Carg09515-RA vs. TrEMBL
Match: tr|A0A0A0L6I3|A0A0A0L6I3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099630 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 3.3e-62
Identity = 143/200 (71.50%), Postives = 153/200 (76.50%), Query Frame = 0


Query: 1   MDRSTGSTGYGGNTQQDQPGFAGPSMYQPNTGS---PPNNFXXXXXXXXXXXXXXXXXAV 60
           MDRS+ + GYGG TQ  Q GF+GP MY+ NTG+        XXXXXXXXXXXXXXXXX  
Sbjct: 1   MDRSS-ANGYGGTTQSAQHGFSGPRMYEANTGNXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  RGTVWSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCS 120
           RG VWS+GLFDCHEDETNA                        CPLGSLIYALMMPALCS
Sbjct: 61  RGNVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCS 120

Query: 121 QWVMGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILA 174
           QW+MGS YR RLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDP+LGWNGILA
Sbjct: 121 QWLMGSKYRTRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILA 180

[Close]

BLAST of Carg09515-RA vs. TrEMBL
Match: tr|V7BX96|V7BX96_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G169200g PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.7e-45
Identity = 89/140 (63.57%), Postives = 100/140 (71.43%), Query Frame = 0


Query: 59  GTVWSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCSQ 118
           GT WS+GLFDCHED+TNA                        CPLGS IY LMMPALCSQ
Sbjct: 22  GTPWSTGLFDCHEDQTNAVMTSFLPCVTFGQMAEVLDGGELSCPLGSFIYLLMMPALCSQ 81

Query: 119 WVMGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQ 173
           W+MGS YR +LR+RYNLVEAPYTDI+SH+FCPCCSLCQEFRELR RGLDP+LGWNGILAQ
Sbjct: 82  WIMGSKYRTKLRKRYNLVEAPYTDIVSHIFCPCCSLCQEFRELRIRGLDPALGWNGILAQ 141

[Close]

BLAST of Carg09515-RA vs. TrEMBL
Match: tr|A0A2P4MI53|A0A2P4MI53_QUESU (Protein plant cadmium resistance 8 OS=Quercus suber OX=58331 GN=CFP56_18342 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 5.9e-43
Identity = 82/140 (58.57%), Postives = 102/140 (72.86%), Query Frame = 0


Query: 59  GTVWSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCSQ 118
           G+ WS+GLFDCHE +TNA                        C LGS IY LMMPALCSQ
Sbjct: 35  GSPWSTGLFDCHEHQTNAIMTTFLPCVTFGQIAEVLDAGEMTCHLGSFIYLLMMPALCSQ 94

Query: 119 WVMGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQ 173
           W++GS YR +LR++Y+LVEAPYTD+ISH+FCPCCSLCQEFREL+ RGLDP+LGWNGILA+
Sbjct: 95  WIIGSKYRTKLRKKYDLVEAPYTDVISHIFCPCCSLCQEFRELKNRGLDPALGWNGILAE 154

[Close]

BLAST of Carg09515-RA vs. TrEMBL
Match: tr|A0A1S3U3W2|A0A1S3U3W2_VIGRR (LOW QUALITY PROTEIN: protein PLANT CADMIUM RESISTANCE 8 OS=Vigna radiata var. radiata OX=3916 GN=LOC106761654 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42
Identity = 85/140 (60.71%), Postives = 99/140 (70.71%), Query Frame = 0


Query: 59  GTVWSSGLFDCHEDETNA------------------------CPLGSLIYALMMPALCSQ 118
           G+ WS+GLFDCHE++TNA                        C LGS IY LMMPALCSQ
Sbjct: 31  GSPWSTGLFDCHENQTNAVMTSFFPCVTFGQIAEILDGGELSCHLGSFIYLLMMPALCSQ 90

Query: 119 WVMGSSYRKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLGWNGILAQ 173
           W+MGS YR +LR+RYNLVEAPYTDI+SH+FCPCCSLCQEFREL+ RGLDP+LGWNGILAQ
Sbjct: 91  WIMGSKYRTKLRKRYNLVEAPYTDIVSHIFCPCCSLCQEFRELKIRGLDPALGWNGILAQ 150

The following BLAST results are available for this feature:

BLAST of Carg09515-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953977.1	2.3e-83	87.82	protein PLANT CADMIUM RESISTANCE 8 [Cucurbita moschata]	[more]
XP_023548895.1	1.3e-81	86.29	protein PLANT CADMIUM RESISTANCE 8 [Cucurbita pepo subsp. pepo]	[more]
XP_022992370.1	2.4e-80	85.28	protein PLANT CADMIUM RESISTANCE 8 [Cucurbita maxima]	[more]
XP_008452303.1	1.3e-62	71.50	PREDICTED: protein PLANT CADMIUM RESISTANCE 8 [Cucumis melo]	[more]
XP_011650553.1	5.0e-62	71.50	PREDICTED: protein PLANT CADMIUM RESISTANCE 8 [Cucumis sativus] >KGN56202.1 hypo...	[more]

BLAST of Carg09515-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G52200.1	9.5e-39	53.24	PLAC8 family protein	[more]
AT1G49030.1	5.2e-21	35.56	PLAC8 family protein	[more]
AT3G18470.1	1.9e-18	34.07	PLAC8 family protein	[more]
AT3G18460.1	7.1e-18	34.56	PLAC8 family protein	[more]
AT1G58320.1	1.9e-15	38.39	PLAC8 family protein	[more]

BLAST of Carg09515-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M815\|PCR8_ARATH	1.7e-37	53.24	Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana OX=3702 GN=PCR8 PE=1 ...	[more]
sp\|Q9M9A5\|PCR6_ARATH	9.4e-20	35.56	Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=PCR6 PE=2 ...	[more]
sp\|Q9LS43\|PCR7_ARATH	3.4e-17	34.07	Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana OX=3702 GN=PCR7 PE=2 ...	[more]
sp\|Q9LS44\|PCR4_ARATH	1.3e-16	34.56	Protein PLANT CADMIUM RESISTANCE 4 OS=Arabidopsis thaliana OX=3702 GN=PCR4 PE=3 ...	[more]
sp\|Q9LS45\|PCR5_ARATH	3.5e-14	34.07	Protein PLANT CADMIUM RESISTANCE 5 OS=Arabidopsis thaliana OX=3702 GN=PCR5 PE=2 ...	[more]

BLAST of Carg09515-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BUC2\|A0A1S3BUC2_CUCME	8.7e-63	71.50	protein PLANT CADMIUM RESISTANCE 8 OS=Cucumis melo OX=3656 GN=LOC103493369 PE=4 ...	[more]
tr\|A0A0A0L6I3\|A0A0A0L6I3_CUCSA	3.3e-62	71.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099630 PE=4 SV=1	[more]
tr\|V7BX96\|V7BX96_PHAVU	3.7e-45	63.57	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G169200g PE=4 ...	[more]
tr\|A0A2P4MI53\|A0A2P4MI53_QUESU	5.9e-43	58.57	Protein plant cadmium resistance 8 OS=Quercus suber OX=58331 GN=CFP56_18342 PE=4...	[more]
tr\|A0A1S3U3W2\|A0A1S3U3W2_VIGRR	1.0e-42	60.71	LOW QUALITY PROTEIN: protein PLANT CADMIUM RESISTANCE 8 OS=Vigna radiata var. ra...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006461	PLAC_motif_containing

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg09515	Carg09515	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg09515-RA	Carg09515-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09515-RA.CDS.3	Carg09515-RA.CDS.3	CDS
Carg09515-RA.CDS.2	Carg09515-RA.CDS.2	CDS
Carg09515-RA.CDS.1	Carg09515-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09515-RA.exon.3	Carg09515-RA.exon.3	exon
Carg09515-RA.exon.2	Carg09515-RA.exon.2	exon
Carg09515-RA.exon.1	Carg09515-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006461	PLAC8 motif-containing protein	PFAM	PF04749	PLAC8	coord: 62..136 e-value: 2.2E-12 score: 47.7
IPR006461	PLAC8 motif-containing protein	TIGRFAM	TIGR01571	TIGR01571	coord: 76..138 e-value: 1.5E-15 score: 55.8
IPR006461	PLAC8 motif-containing protein	PANTHER	PTHR15907	FAMILY NOT NAMED	coord: 76..172
IPR006461	PLAC8 motif-containing protein	PANTHER	PTHR15907	FAMILY NOT NAMED	coord: 43..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	PANTHER	PTHR15907:SF46	PROTEIN PLANT CADMIUM RESISTANCE 8	coord: 43..77
None	No IPR available	PANTHER	PTHR15907:SF46	PROTEIN PLANT CADMIUM RESISTANCE 8	coord: 76..172