Carg09421-RA (mRNA) Silver-seed gourd

Overview
NameCarg09421-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionV-type proton ATPase proteolipid subunit
LocationCucurbita_argyrosperma_scaffold_018 : 1204520 .. 1207265 (+)
Sequence length798
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAGTGCTTCTGTTAATAACTTTGATAAACGAAAATGTTCCTTATGTCTAGACAAAGGAGATCGACTGCTTATGCGACTTGGAACACGACAAATGCAATATACGCACCGAGGCATCTGTAAGTGAGTCAACATTTCCTTCCCCTTTCTGTCTCTTGCACTTTTCTTGTCAATTGGTTTACTGCTTACAATTTTTGGTTATCGCTAGGTTTGCAGTGTATGGATTGTTGCTTCACTCATACCCACAATTAGGTAACTTTCTTTTAGCCTATTTTAGACCCTTCACTTATTGCAGCTGTTGCATATTTGTATATGAGCACTAGAACATCTTAGAATAATGTCATGAATAGAAGTATTATCCAAAGTGAAGCATGTGACCTTGGTATCTGATTTGTGGTCGAGTCCATCGTCGATTATTGATAATTCCATTTGCAAATCATGCATTTTTCGGGTGCACCTAGCTTGATGGTAAAAAGTTTAAGGTTCGAAGTCCTATCTTCAGTCCTCAACTTTAACTCTGCAAAAGAAAGGGATGAATATAGAAACATGTGCAGTTGTTTTACTTTCTGGTCTTCAGATTTGGTGTTTTATGCAACTGATTTATCAAGTTGTCGTGTTTTAGCTCGGTGTTTTGTTTATTTATTGACTTGAATAAGTGGGGTGTGAAAATTTTCAGACCTTTCGATCAAAGAACATCTACATTAATGGTTTTACTAGACGGTCGTTATGCCTAATAGTATTCACATATGGCATGTATTTGGTGGTGATGTCTGAATTGTGAGTAGCTAGGAAGTTGTGTAACGGCTCAAACCTATTGCTAGTAGATATTGTCTTCTTTAGGCTTTTCCTCAAGATTTTTAAAACGCGTCTGCGAAGGAGAGATTTTCACTTTTATAAAGAATGCTTCGTTCTCCTCCCCAACCGATGTGAGATCTCACCGTCCCTTTTCCTAGCAGATGCGTTTTTAAAACTTTGAAGGGAAGCTTGAAAGGAAAACCCCAAAGAGGACAATTTCTGCTAGTGGTGGGCTTGGACTGTTACAGGTTGTTATGAGGAGTGTTTCGAGGAGGTTAAATTGTAGTCATGATTTGCTTCATTATTGTCCATTGAGTTTAATACCCATCAGTTTTTGCCAATTATTCTTACCTGCCCTGTTCGTTCAAAAAGAATCCAAAGCTAGGAAAAAGTTTGATAGCTTCTATTATTTTTAAGCATAATTTAATTTATTTGATTTCATATCTTTAAAATGTAATATTGCAGAAAAGAAAAAAGAGTAATTCCTATGTTTCATGGAATATATAATTCGTGAATCTTTTGTATTGATAAGGTTTTAAATTCTCACATCTGTCTGTTTTAATTTAATATTTCTAAGTGACGGAATGATTGAGTTGTAATATGTGCAGGCACGTTTTTATAGGCTTCACTAGCGAGATGTGGGCCTGTTACTGGGCCACGTCTGCATGTTATTCTGATTGCGGCCCACTTTATATTCCTGTTTGGGCCTGTTGTGGGCCAGGGGAAGCACAGCTGGAGGACCCGATCGTATTATTCTAAAGCAAATAATTATTCGCGGTAGCGTGAGCATTTCAGACAATTGTTGCGAGGCGACAAAGTTGTGGGCTTATTTGAAGAACAGGAAGAAGGGGGGAGAGAGAGAGAGAGAGTTCGAGATCGGATCTAATCGGCGACCTTCTTCATCTTCACCATCGAACCCAGAAAAGATGTCGTCAACTTTCAGTGGCGATGAAACGGCACCTTTCTTCGGCTTCCTCGGCGCCGCTGCGGCCCTCGTCTTCTCCTGTAATTCATCTTTCATCCAATGCGGTTTAATTTATTGTTTTCTGGGTGTGGATCTTTGATTCATATCGCGATGGGGGGTTTATGTTGTTTTATTTTATTTTATTTTTTTTATTTGATTAGGTATGGGAGCTGCTTATGGAACGGCGAAGAGCGGGGTGGGAGTTGCGTCTATGGGAGTAATGAGGCCTGAACTGGTGATGAAGTCTATTGTTCCGGTGGTCATGGCTGGAGTTTTGGGTATTTATGGTCTTATTATTGCTGTGATTATTAGCACAGGGATTAACCCCAAAGCCAAATCTTATTACCTTTTCGATGGCTACGCGCATCTCTCCTCTGGGCTTGCTTGTGGCCTTGCTGGTCTGTCCGCTGGCATGGCTATCGGGATCGTCGGCGATGCTGGTGTTAGGTACAATTTGTTAACGTTTTGGAATGTTGATTTTAGCTGTCGTCGTGCGTGTATTTTGACCTATTAGCCTGTTCGCGCTTGTGTACTTGTTATTGATAGAATTCGTTCGTGCACGTCTTGGTTGTTCTGTAAGCTTGTTTCTGCATTTTTCTTAGATTTCTTCCTCAAAAACTTGGTATATAATTTTGTTGATGTTATTGCATTATACTCTGTTGGATTGGAGTTTGTATGTTGGATGTGATTTTGATGGATCCATGTCGTGGTGATGTAAATAGCTATAACTTTGCTTTGATTTATTCCATTATGTTCCATGGTTTTGAGATAAGGTTATTCCTGAACTTTGTTTTCTCAAACCCATCTGATCAAGGTACTTATTCCTTACATTTAATCTTCTTCGTTGGACAGAGCCAATGCCCAGCAGCCCAAGCTTTTCGTTGGGATGATTCTTATTCTAATTTTTGCTGAAGCGCTGGCACTGTATGGACTCATCGTGGGCATTATTCTGTCTTCCCGAGCTGGTCAGTCGAGAGCTGATTAA

mRNA sequence

ATGGGCAGTGCTTCTGTTAATAACTTTGATAAACGAAAATGTTCCTTATGTCTAGACAAAGGAGATCGACTGCTTATGCGACTTGGAACACGACAAATGCAATATACGCACCGAGGCATCTGTAAGTTTGCAGTGTATGGATTGTTGCTTCACTCATACCCACAATTAGACAATTGTTGCGAGGCGACAAAGTTGTGGGCTTATTTGAAGAACAGGAAGAAGGGGGGAGAGAGAGAGAGAGAGTTCGAGATCGGATCTAATCGGCGACCTTCTTCATCTTCACCATCGAACCCAGAAAAGATGTCGTCAACTTTCAGTGGCGATGAAACGGCACCTTTCTTCGGCTTCCTCGGCGCCGCTGCGGCCCTCGTCTTCTCCTGTATGGGAGCTGCTTATGGAACGGCGAAGAGCGGGGTGGGAGTTGCGTCTATGGGAGTAATGAGGCCTGAACTGGTGATGAAGTCTATTGTTCCGGTGGTCATGGCTGGAGTTTTGGGTATTTATGGTCTTATTATTGCTGTGATTATTAGCACAGGGATTAACCCCAAAGCCAAATCTTATTACCTTTTCGATGGCTACGCGCATCTCTCCTCTGGGCTTGCTTGTGGCCTTGCTGGTCTGTCCGCTGGCATGGCTATCGGGATCGTCGGCGATGCTGGTGTTAGAGCCAATGCCCAGCAGCCCAAGCTTTTCGTTGGGATGATTCTTATTCTAATTTTTGCTGAAGCGCTGGCACTGTATGGACTCATCGTGGGCATTATTCTGTCTTCCCGAGCTGGTCAGTCGAGAGCTGATTAA

Coding sequence (CDS)

ATGGGCAGTGCTTCTGTTAATAACTTTGATAAACGAAAATGTTCCTTATGTCTAGACAAAGGAGATCGACTGCTTATGCGACTTGGAACACGACAAATGCAATATACGCACCGAGGCATCTGTAAGTTTGCAGTGTATGGATTGTTGCTTCACTCATACCCACAATTAGACAATTGTTGCGAGGCGACAAAGTTGTGGGCTTATTTGAAGAACAGGAAGAAGGGGGGAGAGAGAGAGAGAGAGTTCGAGATCGGATCTAATCGGCGACCTTCTTCATCTTCACCATCGAACCCAGAAAAGATGTCGTCAACTTTCAGTGGCGATGAAACGGCACCTTTCTTCGGCTTCCTCGGCGCCGCTGCGGCCCTCGTCTTCTCCTGTATGGGAGCTGCTTATGGAACGGCGAAGAGCGGGGTGGGAGTTGCGTCTATGGGAGTAATGAGGCCTGAACTGGTGATGAAGTCTATTGTTCCGGTGGTCATGGCTGGAGTTTTGGGTATTTATGGTCTTATTATTGCTGTGATTATTAGCACAGGGATTAACCCCAAAGCCAAATCTTATTACCTTTTCGATGGCTACGCGCATCTCTCCTCTGGGCTTGCTTGTGGCCTTGCTGGTCTGTCCGCTGGCATGGCTATCGGGATCGTCGGCGATGCTGGTGTTAGAGCCAATGCCCAGCAGCCCAAGCTTTTCGTTGGGATGATTCTTATTCTAATTTTTGCTGAAGCGCTGGCACTGTATGGACTCATCGTGGGCATTATTCTGTCTTCCCGAGCTGGTCAGTCGAGAGCTGATTAA

Protein sequence

MGSASVNNFDKRKCSLCLDKGDRLLMRLGTRQMQYTHRGICKFAVYGLLLHSYPQLDNCCEATKLWAYLKNRKKGGEREREFEIGSNRRPSSSSPSNPEKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Homology
[Close]
BLAST of Carg09421-RA vs. NCBI nr
Match: XP_017241303.1 (PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit-like [Daucus carota subsp. sativus])

HSP 1 Score: 267.7 bits (683), Expect = 4.2e-68
Identity = 167/177 (94.35%), Postives = 170/177 (96.05%), Query Frame = 0 

Query: 89  RPSSSSPSNPEKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMR 148
           RP+    S+P   SS+FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMR
Sbjct: 20  RPTDPITSSPNMSSSSFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMR 79

Query: 149 PELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXX 208
           PELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXX
Sbjct: 80  PELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXX 139

Query: 209 XXXXXXXXXDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           XXXXXXXXXDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 140 XXXXXXXXXDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 196

[Close]
BLAST of Carg09421-RA vs. NCBI nr
Match: EMS54266.1 (V-type proton ATPase 16 kDa proteolipid subunit [Triticum urartu])

HSP 1 Score: 266.9 bits (681), Expect = 7.2e-68
Identity = 166/176 (94.32%), Postives = 167/176 (94.89%), Query Frame = 0 

Query: 90  PSSSSPSNPEKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRP 149
           P  SS +   KMSS FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRP
Sbjct: 138 PDPSSSTRRRKMSSVFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRP 197

Query: 150 ELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXX 209
           ELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGYAHLSSGLA XXXXXXX
Sbjct: 198 ELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACXXXXXXX 257

Query: 210 XXXXXXXXDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           XXXXXXXXDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 258 XXXXXXXXDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 313

[Close]
BLAST of Carg09421-RA vs. NCBI nr
Match: OWM75007.1 (hypothetical protein CDL15_Pgr021358 [Punica granatum])

HSP 1 Score: 266.9 bits (681), Expect = 7.2e-68
Identity = 165/167 (98.80%), Postives = 167/167 (100.00%), Query Frame = 0 

Query: 99  EKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVP 158
           E+MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVP
Sbjct: 51  EEMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVP 110

Query: 159 VVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXD 218
           VVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXD
Sbjct: 111 VVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXD 170

Query: 219 AGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           AGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 171 AGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 217

[Close]
BLAST of Carg09421-RA vs. NCBI nr
Match: XP_011088499.1 (V-type proton ATPase 16 kDa proteolipid subunit-like [Sesamum indicum])

HSP 1 Score: 266.5 bits (680), Expect = 9.4e-68
Identity = 159/165 (96.36%), Postives = 159/165 (96.36%), Query Frame = 0 

Query: 101 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 160
           MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 161 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 220
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLA  XXXXXXXXXX    DAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGXXXXXXXXXXGIVGDAG 120

Query: 221 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

[Close]
BLAST of Carg09421-RA vs. NCBI nr
Match: OTF90632.1 (putative V-ATPase proteolipid C-like domain protein [Helianthus annuus])

HSP 1 Score: 266.5 bits (680), Expect = 9.4e-68
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 

Query: 101 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 160
           MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 68  MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 127

Query: 161 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 220
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG
Sbjct: 128 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 187

Query: 221 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 188 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 232

[Close]
BLAST of Carg09421-RA vs. TAIR10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-70
Identity = 163/165 (98.79%), Postives = 165/165 (100.00%), Query Frame = 0 

Query: 101 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 160
           M+STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 161 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 220
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 120

Query: 221 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165

[Close]
BLAST of Carg09421-RA vs. TAIR10
Match: AT2G16510.1 (ATPase, F0/V0 complex, subunit C protein)

HSP 1 Score: 261.5 bits (667), Expect = 5.5e-70
Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 103 STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 162
           STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 163 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAGVR 222
           GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAGVR 121

Query: 223 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164

[Close]
BLAST of Carg09421-RA vs. TAIR10
Match: AT4G38920.1 (vacuolar-type H(+)-ATPase C3)

HSP 1 Score: 261.5 bits (667), Expect = 5.5e-70
Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 103 STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 162
           STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 163 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAGVR 222
           GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAGVR 121

Query: 223 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164

[Close]
BLAST of Carg09421-RA vs. TAIR10
Match: AT4G34720.1 (ATPase, F0/V0 complex, subunit C protein)

HSP 1 Score: 261.5 bits (667), Expect = 5.5e-70
Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 103 STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 162
           STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 163 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAGVR 222
           GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAGVR 121

Query: 223 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164

[Close]
BLAST of Carg09421-RA vs. TAIR10
Match: AT1G75630.2 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4)

HSP 1 Score: 229.9 bits (585), Expect = 1.8e-60
Identity = 153/198 (77.27%), Postives = 157/198 (79.29%), Query Frame = 0 

Query: 102 SSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 161
           SS FSGDETAPFFGFLGAAAALVFSCM AAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 3   SSGFSGDETAPFFGFLGAAAALVFSCMXAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 62

Query: 162 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLA-----------XXXXXXXXX 221
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLA           XXXXXXXXX
Sbjct: 63  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXXXXX 122

Query: 222 XXXXXXXDAGVR-----------------------ANAQQPKLFVGMILILIFAEALALY 266
           XXX    D+ ++                       ANAQQPKLFVGMILILIFAEALALY
Sbjct: 123 XXXDCNPDSKIKIYSFTTSFLSNLSQKELFIDLLSANAQQPKLFVGMILILIFAEALALY 182

[Close]
BLAST of Carg09421-RA vs. Swiss-Prot
Match: sp|Q96473|VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana OX=23013 PE=2 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.1e-70
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 

Query: 101 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 160
           MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 161 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 220
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 120

Query: 221 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

[Close]
BLAST of Carg09421-RA vs. Swiss-Prot
Match: sp|Q43434|VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum OX=3635 GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 8.9e-70
Identity = 164/165 (99.39%), Postives = 165/165 (100.00%), Query Frame = 0 

Query: 101 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 160
           MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 161 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 220
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 120

Query: 221 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165

[Close]
BLAST of Carg09421-RA vs. Swiss-Prot
Match: sp|P59228|VATL2_ARATH (V-type proton ATPase subunit c2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c2 PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.0e-69
Identity = 163/165 (98.79%), Postives = 165/165 (100.00%), Query Frame = 0 

Query: 101 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 160
           M+STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 161 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 220
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 120

Query: 221 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165

[Close]
BLAST of Carg09421-RA vs. Swiss-Prot
Match: sp|P68162|VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris OX=161934 GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 5.8e-69
Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 0 

Query: 101 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 160
           MS+ F+GDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSTVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 161 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 220
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 120

Query: 221 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

[Close]
BLAST of Carg09421-RA vs. Swiss-Prot
Match: sp|P68161|VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum OX=3544 GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 5.8e-69
Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 0 

Query: 101 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 160
           MS+ F+GDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSTVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 161 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 220
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 120

Query: 221 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

[Close]
BLAST of Carg09421-RA vs. TrEMBL
Match: tr|M7Z425|M7Z425_TRIUA (V-type proton ATPase proteolipid subunit OS=Triticum urartu OX=4572 GN=TRIUR3_07171 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.8e-68
Identity = 166/176 (94.32%), Postives = 167/176 (94.89%), Query Frame = 0 

Query: 90  PSSSSPSNPEKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRP 149
           P  SS +   KMSS FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRP
Sbjct: 138 PDPSSSTRRRKMSSVFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRP 197

Query: 150 ELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXX 209
           ELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGYAHLSSGLA XXXXXXX
Sbjct: 198 ELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACXXXXXXX 257

Query: 210 XXXXXXXXDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           XXXXXXXXDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 258 XXXXXXXXDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 313

[Close]
BLAST of Carg09421-RA vs. TrEMBL
Match: tr|A0A218WQ75|A0A218WQ75_PUNGR (V-type proton ATPase proteolipid subunit OS=Punica granatum OX=22663 GN=CDL15_Pgr021358 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.8e-68
Identity = 165/167 (98.80%), Postives = 167/167 (100.00%), Query Frame = 0 

Query: 99  EKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVP 158
           E+MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVP
Sbjct: 51  EEMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVP 110

Query: 159 VVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXD 218
           VVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXD
Sbjct: 111 VVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXD 170

Query: 219 AGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           AGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 171 AGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 217

[Close]
BLAST of Carg09421-RA vs. TrEMBL
Match: tr|A0A2G5DV85|A0A2G5DV85_AQUCA (V-type proton ATPase proteolipid subunit OS=Aquilegia coerulea OX=218851 GN=AQUCO_00700367v1 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.2e-68
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 

Query: 101 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 160
           MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 161 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 220
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 120

Query: 221 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

[Close]
BLAST of Carg09421-RA vs. TrEMBL
Match: tr|A0A2J6JMJ1|A0A2J6JMJ1_LACSA (V-type proton ATPase proteolipid subunit OS=Lactuca sativa OX=4236 GN=LSAT_4X115980 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.2e-68
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 

Query: 101 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 160
           MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 161 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 220
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 120

Query: 221 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

[Close]
BLAST of Carg09421-RA vs. TrEMBL
Match: tr|A0A2R6Q0X5|A0A2R6Q0X5_ACTCH (V-type proton ATPase proteolipid subunit OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04584 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.2e-68
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 

Query: 101 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 160
           MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 161 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 220
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAG 120

Query: 221 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 266
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

The following BLAST results are available for this feature:
BLAST of Carg09421-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_017241303.14.2e-6894.35PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit-like [Daucus carota s... [more]
EMS54266.17.2e-6894.32V-type proton ATPase 16 kDa proteolipid subunit [Triticum urartu][more]
OWM75007.17.2e-6898.80hypothetical protein CDL15_Pgr021358 [Punica granatum][more]
XP_011088499.19.4e-6896.36V-type proton ATPase 16 kDa proteolipid subunit-like [Sesamum indicum][more]
OTF90632.19.4e-68100.00putative V-ATPase proteolipid C-like domain protein [Helianthus annuus][more]
BLAST of Carg09421-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19910.11.1e-7098.79ATPase, F0/V0 complex, subunit C protein[more]
AT2G16510.15.5e-7099.39ATPase, F0/V0 complex, subunit C protein[more]
AT4G38920.15.5e-7099.39vacuolar-type H(+)-ATPase C3[more]
AT4G34720.15.5e-7099.39ATPase, F0/V0 complex, subunit C protein[more]
AT1G75630.21.8e-6077.27vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4[more]
BLAST of Carg09421-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q96473|VATL_KALDA3.1e-70100.00V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana OX=2... [more]
sp|Q43434|VATL_GOSHI8.9e-7099.39V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum OX=3635 GN... [more]
sp|P59228|VATL2_ARATH2.0e-6998.79V-type proton ATPase subunit c2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c2 PE=2 S... [more]
sp|P68162|VATL_BETVU5.8e-6998.18V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris OX=161934 GN=VM... [more]
sp|P68161|VATL_MESCR5.8e-6998.18V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum... [more]
BLAST of Carg09421-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|M7Z425|M7Z425_TRIUA4.8e-6894.32V-type proton ATPase proteolipid subunit OS=Triticum urartu OX=4572 GN=TRIUR3_07... [more]
tr|A0A218WQ75|A0A218WQ75_PUNGR4.8e-6898.80V-type proton ATPase proteolipid subunit OS=Punica granatum OX=22663 GN=CDL15_Pg... [more]
tr|A0A2G5DV85|A0A2G5DV85_AQUCA6.2e-68100.00V-type proton ATPase proteolipid subunit OS=Aquilegia coerulea OX=218851 GN=AQUC... [more]
tr|A0A2J6JMJ1|A0A2J6JMJ1_LACSA6.2e-68100.00V-type proton ATPase proteolipid subunit OS=Lactuca sativa OX=4236 GN=LSAT_4X115... [more]
tr|A0A2R6Q0X5|A0A2R6Q0X5_ACTCH6.2e-68100.00V-type proton ATPase proteolipid subunit OS=Actinidia chinensis var. chinensis O... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033177proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179proton-transporting V-type ATPase, V0 domain
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015991ATP hydrolysis coupled proton transport
Vocabulary: INTERPRO
TermDefinition
IPR035921F/V-ATP_Csub_sf
IPR002379ATPase_proteolipid_c-like_dom
IPR011555ATPase_proteolipid_su_C_euk
IPR000245ATPase_proteolipid_csu
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015991 ATP hydrolysis coupled proton transport
cellular_component GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg09421Carg09421gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg09421-RACarg09421-RA-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg09421-RA.exon.1Carg09421-RA.exon.1exon
Carg09421-RA.exon.2Carg09421-RA.exon.2exon
Carg09421-RA.exon.3Carg09421-RA.exon.3exon
Carg09421-RA.exon.4Carg09421-RA.exon.4exon
Carg09421-RA.exon.5Carg09421-RA.exon.5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg09421-RA.CDS.1Carg09421-RA.CDS.1CDS
Carg09421-RA.CDS.2Carg09421-RA.CDS.2CDS
Carg09421-RA.CDS.3Carg09421-RA.CDS.3CDS
Carg09421-RA.CDS.4Carg09421-RA.CDS.4CDS
Carg09421-RA.CDS.5Carg09421-RA.CDS.5CDS


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000245V-ATPase proteolipid subunitPRINTSPR00122VACATPASEcoord: 207..233
score: 85.77
coord: 234..257
score: 82.68
coord: 130..154
score: 82.74
coord: 156..180
score: 71.05
IPR011555V-ATPase proteolipid subunit C, eukaryoticTIGRFAMTIGR01100TIGR01100coord: 113..221
e-value: 2.6E-51
score: 170.4
NoneNo IPR availableGENE3DG3DSA:1.20.120.610coord: 111..262
e-value: 1.5E-59
score: 201.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..105
NoneNo IPR availablePANTHERPTHR10263:SF14V-TYPE PROTON ATPASE SUBUNIT C2coord: 101..264
NoneNo IPR availablePANTHERPTHR10263V-TYPE PROTON ATPASE PROTEOLIPID SUBUNITcoord: 101..264
IPR002379V-ATPase proteolipid subunit C-like domainPFAMPF00137ATP-synt_Ccoord: 117..176
e-value: 1.4E-13
score: 50.8
coord: 197..255
e-value: 7.2E-20
score: 71.0
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILYSSF81333F1F0 ATP synthase subunit Ccoord: 114..177
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILYSSF81333F1F0 ATP synthase subunit Ccoord: 187..256