Carg09350-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09350-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	IQ domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_018 : 831781 .. 834609 (-)
Sequence length	1308

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGCCAGTCAAGATGGTGTTGAAAGATGAGTGGTTGAGTGCCGCCATGGCCGATGATAGCGTCGTCGTTGAGTTGCTCGTTCGTCTCAAACAGTCTCAAGCCTCATCCTCGATCAAATCTCCTCTACACGCCGTTATTCCGCCTAGATGGGGTCTCAGGCAACGGCGTTCCAGGATTCTTTCACCTTCTCTTCGATACGATGCCATTGCGCACAAGAATAAGGACTCCTCCTCCACCAGATGCAGCCCCACCACTCCTCTCTCTTGGAGTGGCGAAACCTCTCCTTCCGCTACCGCCGATGGATTCGAAGAGTCCAGCCATCCATCCGAATTCTCCCAATCCTCCAGATCCAAGGTTATTTCTCGATTCTGCTCTTTTTTCCACTCAATCTTCATTTTCTGTTATTTTTTCCTCCTCTGGTTTTGGATTAGATACAGAACCTTCGATCTCCGCCTTGGCGGTTTCCTTTTCCACCGGAGTTGACGAATTTCTCCGCCGACGCAGAGTCGCCGCCGACAAACGAGTATTTCTCTCCTCGTGCCCAACTCTTTGTCCCTCACGAGATGAATTCCTCGTATTTTCTCATAGACGCATTTCCACCGAGAAAACCCCCACATCTCCCTTTTGGACGATGACTCCCTTTTCCTCTGTTTTTCGTTCTTAATAGCGTCGTTAAGTCAAGGGAAATCTAAGTTTCAGGACGGAACGGAGCCGATAAGCACAGGATTGTTGTGGGGAAAGGGATCAGATCGATGATCTGAGAACGGCGTCAGAGTAATTAGTCTGTGCGCGTATGTCCCACGAACAACCCCCCATAACCAGACGGCCTGGAATGGAACCATCGAGAGAGATGGGTTCTTTAGCCATTATTTGACCCTTTGGGTTCTCAGATCTGAAGGTCAATGATCTTCTTTTTCTTCGTTGTTGGCAGTTCCTCTGTTTTTTAAAACCCATTAAATTGGATGAAGAGGCACGCGCAGGGTCACGCGAGCGATGGGCAGTAAGATTCTGAAGAAGAAATTGTGGGTTTAGCTAGATTGATGAACCCCCATGTGGGTTTGATGATGTGGCCTTTACTTACTGGTTTATCAAATTTGAAAAGAAACAATAATAATAAAAGATCCTCTTTTGTTTAAATAATATTCTGAATATAATTGTGGACTTTTGTGTTCTTTCCCTCTGTAGTTTCTGTATAAAGAAACTGATATCTGATGGGTTGTTCTTTTGTGCAGGGCTGTGGTTCAAATGAATTCAGCTGTAGCACTGCCATGGCCAAGAGGTTTAAAAGAAGGAAGGTAAAATTCCCATGTTCTGTTCAGTGCTAACAATGACTATACGACCCGAGTCTTTCGATTGAACTCTTGTAACGTTATTTGTTCGAGTCTTTCTGGAATAGCCAAAGCCCGCTGCACATATTGGACTTTCCCTTTTGAGTTTTTCCTCAATGTTTCTAAAACATTTCTGTTACAGATAGAGGAATGCTTTCTTCTCCTCTCCAACCGATGCGGGATCTCACACTTTCATTCAAACTCTTGTAACGTCATTTGTTCATGTCTTTCATTCCAACTCTCGTATGAGTACGGCCCAAACCCTCTGCAGATATTGTCATTTTGGGTTTTTTTTTTAGTTTCCGCTCAAGGTTTTTAAAACGCCTCTACTGGAGAGAGGTTTTCATACCATTATAAGAAATGCTTTGTTCTACTCTTCAACCGACGTGAGATCTCACACTCTTATTCAAACTCTTGTAAAGTCGTTTGTTCGTGTCTTTCATTCAAACCCTTGTAATGACATTTGTTGGTTGCATGGTGAACTATGAGTATTTCTCTGAAATATATAGCTAAACCTTTTCAGGCGTTGGCTGATCTGAGAGTGGAGGAGTCTGTACTTTTGAAGGAAAGGTTACATCTTAAAAAGGTGGGTTCGCTGTTCTAACGCCAAGAGGGATCATCATGAATTGTTTTTTGTGTGTGTAATGAAAGTGGATTGGTTGCTTTGAACAGGAGCTGGATAGCCTACATGCGACGTTCAAGGAACAGACAACTAACAACCAGAAGTTGAAGAAAATTAAGGTGATTCTTAAACAGATGAAATGACTGTCTTAAAATGTTAAGAAATGTGTATGGATATGATAATAATATGATGGTGCTGTTGCCTCTTCTGAATTTGAACTTTTTTTTTTATGTTTTTCAGCTCAATCTGAATTCTGATGCATCATCAGATCGTGTTCAGGATGAGTCGAAGCCAGTAGCTTCCAGTCAATGGTGCCGAGACGTGGATCCTACGCCCGACAACATTCTTCCTGCAACTTCGCCGATACAAACTGTACCTGGATTGCAGGAGACACAGGAGACAAATTCAATGGAAAGTGGTGGTTTCTTTCTACCAGATCTTAATATGATCCCAGCTGAGGATTGTCTCTAAGGCTTTTTCATCAAGACATGTTTCTGCTGGTCGAGGACGTTACTTCGAGATAAGACGACTTGTCCCGATGCCAAATGAAGACTGATTTGAGTACTGGAGGCTGTTCTTGGCGTTGAAGTTGATTGATCGACGAGAATTTCGAAACATGGGACGCCCTTCGTTGCTGGTAGAATCCTTCATTGAAATTCATTTCGAAAACTGTAGGATCAAACATGTTTGATTCTTTGTAGGTAAAAAAAAGGGAAAAGGTAATGAAAACTTGTTCTATGCTGAAATCTTTACTCTCTATTTTCAGGAAAAGCTATCACCCTTACAGTTTATTAAATTTAAAAAATATATATATATGTTTGGAAAAGCTTTTACGAATTTAATAAAAAGTTTATTATTTTGAGTAATGGTATTTTTT

mRNA sequence

CTCTGCCAGTCAAGATGGTGTTGAAAGATGAGTGGTTGAGTGCCGCCATGGCCGATGATAGCGTCGTCGTTGAGTTGCTCGTTCGTCTCAAACAGTCTCAAGCCTCATCCTCGATCAAATCTCCTCTACACGCCGTTATTCCGCCTAGATGGGGTCTCAGGCAACGGCGTTCCAGGATTCTTTCACCTTCTCTTCGATACGATGCCATTGCGCACAAGAATAAGGACTCCTCCTCCACCAGATGCAGCCCCACCACTCCTCTCTCTTGGAGTGGCGAAACCTCTCCTTCCGCTACCGCCGATGGATTCGAAGAGTCCAGCCATCCATCCGAATTCTCCCAATCCTCCAGATCCAAGATACAGAACCTTCGATCTCCGCCTTGGCGGTTTCCTTTTCCACCGGAGTTGACGAATTTCTCCGCCGACGCAGAGTCGCCGCCGACAAACGAGTATTTCTCTCCTCGTGCCCAACTCTTTGGCTGTGGTTCAAATGAATTCAGCTGTAGCACTGCCATGGCCAAGAGGTTTAAAAGAAGGAAGGCGTTGGCTGATCTGAGAGTGGAGGAGTCTGTACTTTTGAAGGAAAGGTTACATCTTAAAAAGGAGCTGGATAGCCTACATGCGACGTTCAAGGAACAGACAACTAACAACCAGAAGTTGAAGAAAATTAAGCTCAATCTGAATTCTGATGCATCATCAGATCGTGTTCAGGATGAGTCGAAGCCAGTAGCTTCCAGTCAATGGTGCCGAGACGTGGATCCTACGCCCGACAACATTCTTCCTGCAACTTCGCCGATACAAACTGTACCTGGATTGCAGGAGACACAGGAGACAAATTCAATGGAAAGTGGTGGTTTCTTTCTACCAGATCTTAATATGATCCCAGCTGAGGATTGTCTCTAAGGCTTTTTCATCAAGACATGTTTCTGCTGGTCGAGGACGTTACTTCGAGATAAGACGACTTGTCCCGATGCCAAATGAAGACTGATTTGAGTACTGGAGGCTGTTCTTGGCGTTGAAGTTGATTGATCGACGAGAATTTCGAAACATGGGACGCCCTTCGTTGCTGGTAGAATCCTTCATTGAAATTCATTTCGAAAACTGTAGGATCAAACATGTTTGATTCTTTGTAGGTAAAAAAAAGGGAAAAGGTAATGAAAACTTGTTCTATGCTGAAATCTTTACTCTCTATTTTCAGGAAAAGCTATCACCCTTACAGTTTATTAAATTTAAAAAATATATATATATGTTTGGAAAAGCTTTTACGAATTTAATAAAAAGTTTATTATTTTGAGTAATGGTATTTTTT

Coding sequence (CDS)

ATGGTGTTGAAAGATGAGTGGTTGAGTGCCGCCATGGCCGATGATAGCGTCGTCGTTGAGTTGCTCGTTCGTCTCAAACAGTCTCAAGCCTCATCCTCGATCAAATCTCCTCTACACGCCGTTATTCCGCCTAGATGGGGTCTCAGGCAACGGCGTTCCAGGATTCTTTCACCTTCTCTTCGATACGATGCCATTGCGCACAAGAATAAGGACTCCTCCTCCACCAGATGCAGCCCCACCACTCCTCTCTCTTGGAGTGGCGAAACCTCTCCTTCCGCTACCGCCGATGGATTCGAAGAGTCCAGCCATCCATCCGAATTCTCCCAATCCTCCAGATCCAAGATACAGAACCTTCGATCTCCGCCTTGGCGGTTTCCTTTTCCACCGGAGTTGACGAATTTCTCCGCCGACGCAGAGTCGCCGCCGACAAACGAGTATTTCTCTCCTCGTGCCCAACTCTTTGGCTGTGGTTCAAATGAATTCAGCTGTAGCACTGCCATGGCCAAGAGGTTTAAAAGAAGGAAGGCGTTGGCTGATCTGAGAGTGGAGGAGTCTGTACTTTTGAAGGAAAGGTTACATCTTAAAAAGGAGCTGGATAGCCTACATGCGACGTTCAAGGAACAGACAACTAACAACCAGAAGTTGAAGAAAATTAAGCTCAATCTGAATTCTGATGCATCATCAGATCGTGTTCAGGATGAGTCGAAGCCAGTAGCTTCCAGTCAATGGTGCCGAGACGTGGATCCTACGCCCGACAACATTCTTCCTGCAACTTCGCCGATACAAACTGTACCTGGATTGCAGGAGACACAGGAGACAAATTCAATGGAAAGTGGTGGTTTCTTTCTACCAGATCTTAATATGATCCCAGCTGAGGATTGTCTCTAA

Protein sequence

MVLKDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSLRYDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSKIQNLRSPPWRFPFPPELTNFSADAESPPTNEYFSPRAQLFGCGSNEFSCSTAMAKRFKRRKALADLRVEESVLLKERLHLKKELDSLHATFKEQTTNNQKLKKIKLNLNSDASSDRVQDESKPVASSQWCRDVDPTPDNILPATSPIQTVPGLQETQETNSMESGGFFLPDLNMIPAEDCL

Homology

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BLAST of Carg09350-RA vs. NCBI nr
Match: XP_022962277.1 (uncharacterized protein LOC111462771 [Cucurbita moschata])

HSP 1 Score: 465.3 bits (1196), Expect = 1.5e-127
Identity = 250/295 (84.75%), Postives = 254/295 (86.10%), Query Frame = 0


Query: 1   MVLKDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSL 60
           MVLKDEWLSAAMADDS+VVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSL
Sbjct: 1   MVLKDEWLSAAMADDSIVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSL 60

Query: 61  RYDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSKIQNLRS 120
           RYDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSK      
Sbjct: 61  RYDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSK------ 120

Query: 121 PPWRFPFPPELTNFSADAESPPTNEYFSPRAQLFGCGSNEFSCSTAMAKRFKRRKALADL 180
                                             GCGSNEFSCSTAMAKRFKRRKALADL
Sbjct: 121 ----------------------------------GCGSNEFSCSTAMAKRFKRRKALADL 180

Query: 181 RVEESVLLKERLHLKKELDSLHATFKEQTTNNQKLKKIKLNLNSDASSDRVQDESKPVAS 240
           RVEESVLLKERLHLKKELDSLHATFKEQTTNNQ LKKIKLNLNSDASSDRV+DESKPVAS
Sbjct: 181 RVEESVLLKERLHLKKELDSLHATFKEQTTNNQMLKKIKLNLNSDASSDRVRDESKPVAS 240

Query: 241 SQWCRDVDPTPDNILPATSPIQTVPGLQETQETNSMESGGFFLPDLNMIPAEDCL 296
           +QWCRDVDPTPDN+LPATSPIQTVPGLQETQETNSMESGGFFLPDLNMIPAEDCL
Sbjct: 241 NQWCRDVDPTPDNVLPATSPIQTVPGLQETQETNSMESGGFFLPDLNMIPAEDCL 255

[Close]

BLAST of Carg09350-RA vs. NCBI nr
Match: XP_023547221.1 (uncharacterized protein LOC111806097 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 460.3 bits (1183), Expect = 4.9e-126
Identity = 248/295 (84.07%), Postives = 253/295 (85.76%), Query Frame = 0


Query: 1   MVLKDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSL 60
           MVLKDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSL
Sbjct: 1   MVLKDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSL 60

Query: 61  RYDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSKIQNLRS 120
           RYDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSK      
Sbjct: 61  RYDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSK------ 120

Query: 121 PPWRFPFPPELTNFSADAESPPTNEYFSPRAQLFGCGSNEFSCSTAMAKRFKRRKALADL 180
                                             GCGSNEFSCSTAMAKRFKRRKALADL
Sbjct: 121 ----------------------------------GCGSNEFSCSTAMAKRFKRRKALADL 180

Query: 181 RVEESVLLKERLHLKKELDSLHATFKEQTTNNQKLKKIKLNLNSDASSDRVQDESKPVAS 240
           RVEESVLLKER+HLKKELDSLHATFKEQTTNNQKLKKIKLNL+SDASSDRV+D  KPVAS
Sbjct: 181 RVEESVLLKERIHLKKELDSLHATFKEQTTNNQKLKKIKLNLHSDASSDRVRDGLKPVAS 240

Query: 241 SQWCRDVDPTPDNILPATSPIQTVPGLQETQETNSMESGGFFLPDLNMIPAEDCL 296
           +QWCRDVDPTPDN+LPATSPIQTVPGLQETQETNSMESGGFFLPDLNMIPAEDCL
Sbjct: 241 NQWCRDVDPTPDNVLPATSPIQTVPGLQETQETNSMESGGFFLPDLNMIPAEDCL 255

[Close]

BLAST of Carg09350-RA vs. NCBI nr
Match: XP_022996628.1 (uncharacterized protein LOC111491811 [Cucurbita maxima])

HSP 1 Score: 450.7 bits (1158), Expect = 3.9e-123
Identity = 247/295 (83.73%), Postives = 248/295 (84.07%), Query Frame = 0


Query: 1   MVLKDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSL 60
           M LKDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSL
Sbjct: 1   MALKDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSL 60

Query: 61  RYDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSKIQNLRS 120
           R DAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSK      
Sbjct: 61  RCDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSK------ 120

Query: 121 PPWRFPFPPELTNFSADAESPPTNEYFSPRAQLFGCGSNEFSCSTAMAKRFKRRKALADL 180
                                             G GSNEFSCSTAMAKRFKRRKALADL
Sbjct: 121 ----------------------------------GYGSNEFSCSTAMAKRFKRRKALADL 180

Query: 181 RVEESVLLKERLHLKKELDSLHATFKEQTTNNQKLKKIKLNLNSDASSDRVQDESKPVAS 240
           RVEESVLLKERL LKKELDSLHATFKEQTTNNQKLKKIKLNLNSDASSDRV DE KPVAS
Sbjct: 181 RVEESVLLKERLDLKKELDSLHATFKEQTTNNQKLKKIKLNLNSDASSDRVWDELKPVAS 240

Query: 241 SQWCRDVDPTPDNILPATSPIQTVPGLQETQETNSMESGGFFLPDLNMIPAEDCL 296
           +QWCRD DPTPDNILPATSPIQTVPGLQETQETNSMESGGFFLPDLNMIPAEDCL
Sbjct: 241 NQWCRDADPTPDNILPATSPIQTVPGLQETQETNSMESGGFFLPDLNMIPAEDCL 255

[Close]

BLAST of Carg09350-RA vs. NCBI nr
Match: XP_004138712.1 (PREDICTED: uncharacterized protein LOC101213579 isoform X1 [Cucumis sativus] >KGN62977.1 hypothetical protein Csa_2G382500 [Cucumis sativus])

HSP 1 Score: 355.1 bits (910), Expect = 2.2e-94
Identity = 206/302 (68.21%), Postives = 227/302 (75.17%), Query Frame = 0


Query: 1   MVLKDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSL 60
           MVLKDEW  AAMADD+VVVELLVRLKQSQASSSIKSP   VIP RWGLRQRRSRILSP  
Sbjct: 1   MVLKDEWFCAAMADDTVVVELLVRLKQSQASSSIKSP---VIPSRWGLRQRRSRILSP-F 60

Query: 61  RYDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSKIQNLRS 120
           R+DA++HKNKDS+STRCSPTTPLSWSG+TSPSATADGFEESSHPSEFS SSRSK      
Sbjct: 61  RFDAVSHKNKDSTSTRCSPTTPLSWSGDTSPSATADGFEESSHPSEFSLSSRSK------ 120

Query: 121 PPWRFPFPPELTNFSADAESPPTNEYFSPRAQLFGCGSNEFSCSTAMAKRFKRRKALADL 180
                                             GCG NEFS STAMAKR KRRKALADL
Sbjct: 121 ----------------------------------GCGINEFSSSTAMAKRLKRRKALADL 180

Query: 181 RVEESVLLKERLHLKKELDSLHATFKEQTTNNQKLKKIKLNLNSDASSDRVQDESKPVAS 240
           RVEES+LLKER+HLKKEL+SLHATFKEQTTNN+KLKK+KLN+N + SSD ++D SKPVAS
Sbjct: 181 RVEESLLLKERVHLKKELESLHATFKEQTTNNEKLKKMKLNMNFNTSSDHLRDMSKPVAS 240

Query: 241 SQWCRDVDPTPDNILPATSPIQTVPG------LQETQETNSMES-GGFFLPDLNMIPAED 296
           +Q C+  DPT +++ PAT P+QT PG          QE NSMES GGFFLPDLNMIPAED
Sbjct: 241 NQQCQRADPTTESV-PATLPMQTAPGNSSQSESNNRQEINSMESGGGFFLPDLNMIPAED 257

[Close]

BLAST of Carg09350-RA vs. NCBI nr
Match: XP_022131287.1 (uncharacterized protein LOC111004554 [Momordica charantia])

HSP 1 Score: 345.9 bits (886), Expect = 1.4e-91
Identity = 204/302 (67.55%), Postives = 222/302 (73.51%), Query Frame = 0


Query: 1   MVLKDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSL 60
           MV KDEW+SAAMADD VVVELLVRLKQSQASSS+KSPL AVIPPRWGLRQRRSRILSP  
Sbjct: 1   MVFKDEWVSAAMADDRVVVELLVRLKQSQASSSMKSPLPAVIPPRWGLRQRRSRILSP-F 60

Query: 61  RYDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSKIQNLRS 120
           RYDAIAHKNKDS+STRCSPTTPLSWSG+TSPSATADGFEESSHP   S  SRSK      
Sbjct: 61  RYDAIAHKNKDSTSTRCSPTTPLSWSGDTSPSATADGFEESSHP---SHPSRSK------ 120

Query: 121 PPWRFPFPPELTNFSADAESPPTNEYFSPRAQLFGCG-SNEFSCSTAMAKRFKRRKALAD 180
                                             G G ++EFSCSTAMAKR KRRKALAD
Sbjct: 121 ----------------------------------GYGTTSEFSCSTAMAKRLKRRKALAD 180

Query: 181 LRVEESVLLKERLHLKKELDSLHATFKEQTTNNQKLKKIKLNLNSDASSDRVQDESKPVA 240
           LRVEES+LLKER+HLKKEL SLHATFKEQTTNN+KLKK+KLNLN +ASSD + DESK   
Sbjct: 181 LRVEESLLLKERVHLKKELASLHATFKEQTTNNEKLKKMKLNLNFNASSDSICDESKQAT 240

Query: 241 SSQWCRDVDPTPDNILPATSPIQTV------PGLQETQETNSMESGGFFLPDLNMIPAED 296
           S+Q C+ +DPTP+ I P TSPIQ V       G  +  E N +E GGFFLPDLNMIPAED
Sbjct: 241 SNQPCQSMDPTPEKI-PTTSPIQIVLGNSMQSGATKPHEINPVEEGGFFLPDLNMIPAED 257

[Close]

BLAST of Carg09350-RA vs. TAIR10
Match: AT4G32030.1 (unknown protein)

HSP 1 Score: 99.8 bits (247), Expect = 3.1e-21
Identity = 92/292 (31.51%), Postives = 130/292 (44.52%), Query Frame = 0


Query: 4   KDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPP-RWGLRQRRSRILSPSLRY 63
           KD+W++ A+ DD +VVELL+RLK   A + +      ++PP RWG+RQRRSR        
Sbjct: 12  KDDWVAVAITDDDLVVELLLRLK--HAGTVVSDNPAVILPPLRWGIRQRRSRSSRFGGGG 71

Query: 64  DAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSKIQNLRSPP 123
             +    KD  S R SP TPLS                                      
Sbjct: 72  GVLVSLKKDVDSVRASPKTPLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKV 131

Query: 124 WRFPFPPELTNFSADAESPPTNEYFSPRAQLFGCGSNEFSCSTAMAKRFKRRKALADLRV 183
           +                  PTNE                  ++  +KR K+RK+  +L+ 
Sbjct: 132 F------------------PTNE-----------------ITSCFSKRLKKRKSSFELKN 191

Query: 184 EESVLLKERLHLKKELDSLHATFKEQTTNNQKLKKIKLNLNSDASSDRVQDESKPVASSQ 243
           EE++ LKERL L+KE+ SL ATF EQ   NQKLK+IKL+LNS   +++     KPV    
Sbjct: 192 EENLKLKERLDLEKEIASLRATFDEQNLRNQKLKRIKLDLNSGRVTNK-----KPVD--- 246

Query: 244 WCRDVDPTPDNILPATSPIQTVPGLQETQETNSMESGGFF-LPDLNMIPAED 294
                       L   S ++ + G +  + ++S   G FF LPDLNM P+E+
Sbjct: 252 ------------LIRKSQLERLQGSKSCKTSDSQNQGSFFVLPDLNMAPSEE 246

[Close]

BLAST of Carg09350-RA vs. TAIR10
Match: AT1G15800.1 (unknown protein)

HSP 1 Score: 75.9 bits (185), Expect = 4.7e-14
Identity = 76/257 (29.57%), Postives = 113/257 (43.97%), Query Frame = 0


Query: 6   EWLSAAMADDSVVVELLVRLKQSQAS-SSIKSPLHAVIPPRWGLRQRRSRILSPSLRYDA 65
           +W+  AM DDS+V E L+ L  ++ S    KS   + +  +W +RQ R++         A
Sbjct: 5   DWIHEAMGDDSLVAEALICLLHAEPSLPETKSGGASDLKLKWSVRQPRTK---------A 64

Query: 66  IAHKNKDSSSTRCSPTTPLSWSGETS-------PSATADGFEESSHPSEFSQSSRSKIQN 125
              + K    TR SPTTPLSWSG TS             GFEESS   + S++ RSKI  
Sbjct: 65  ATLRKKGDHDTRASPTTPLSWSGATSFXXXXXXXXXXXXGFEESSGVVKLSEAVRSKI-- 124

Query: 126 LRSPPWRFPFPPELTNFSADAESPPTNEYFSPRAQLFGCGSNEFSCSTAMAKRFKRRKAL 185
                                                     + S +T+  KR +++K L
Sbjct: 125 -----------------------------------------TQTSVTTSPFKRSRKKKTL 184

Query: 186 ADLRVEESVLLKERLHLKKELDSLHATFKEQTTNNQKLKKIKLNLNSDASSDRVQDESKP 245
           A L+ EESVLLKER  L+ EL ++    K+Q   N+ LKK++      A S +  D S  
Sbjct: 185 AQLKEEESVLLKERNGLRNELATMQDLLKQQRARNESLKKLQ------AESQKNDDSSFL 203

Query: 246 VASSQWCRDVDPTPDNI 255
           +       D + +P+++
Sbjct: 245 LPDLNIALDNNSSPESL 203

[Close]

BLAST of Carg09350-RA vs. TAIR10
Match: AT5G25210.1 (unknown protein)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12
Identity = 51/126 (40.48%), Postives = 67/126 (53.17%), Query Frame = 0


Query: 1   MVLKDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSL 60
           MV  D+W   AM D  VV ELLV+LK+++    IK+P+  V   RWG++Q RSR      
Sbjct: 1   MVSSDDWTKCAMRDGEVVAELLVKLKEAKV---IKNPI--VTALRWGIQQPRSRC----- 60

Query: 61  RYDAIAHKNKDSSSTRCSPTTPLSWSG-----ETSPSATADGFEESSHPSEFSQSSRSKI 120
                    +  S +RCSP+TPLSWSG      +SPS   DG+E +S       S    I
Sbjct: 61  --------PRKESESRCSPSTPLSWSGGCGGSSSSPSGYVDGYEATSRQISAVGSRSKNI 108

Query: 121 QNLRSP 122
            +LRSP
Sbjct: 121 SSLRSP 108

[Close]

BLAST of Carg09350-RA vs. TAIR10
Match: AT1G80610.1 (unknown protein)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08
Identity = 46/124 (37.10%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 5   DEWLSAAMADDSVVVELLVRLKQSQASSSI-KSPLHAVIPPRWGLRQRRSRILSPSLRYD 64
           + W+  AM+DDS+V E L+RL+ S+  + +  SPL      +W +RQRRS          
Sbjct: 4   ENWIRVAMSDDSMVAEALLRLRHSEPKNRVDASPLKL----KWSVRQRRS---------- 63

Query: 65  AIAHKNKDSSSTRCSPTTPLSWSGETS------------PSATADGFEESSHPSEFSQSS 116
                 K    TR SPTTPLSWSG TS                 +G EESS   + S+  
Sbjct: 64  ------KKGDQTRASPTTPLSWSGATSXXXXXXXXXXXXXXXXMEGLEESSAAVKPSEPF 107

[Close]

BLAST of Carg09350-RA vs. TrEMBL
Match: tr|A0A0A0LQC4|A0A0A0LQC4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382500 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.5e-94
Identity = 206/302 (68.21%), Postives = 227/302 (75.17%), Query Frame = 0


Query: 1   MVLKDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSL 60
           MVLKDEW  AAMADD+VVVELLVRLKQSQASSSIKSP   VIP RWGLRQRRSRILSP  
Sbjct: 1   MVLKDEWFCAAMADDTVVVELLVRLKQSQASSSIKSP---VIPSRWGLRQRRSRILSP-F 60

Query: 61  RYDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSKIQNLRS 120
           R+DA++HKNKDS+STRCSPTTPLSWSG+TSPSATADGFEESSHPSEFS SSRSK      
Sbjct: 61  RFDAVSHKNKDSTSTRCSPTTPLSWSGDTSPSATADGFEESSHPSEFSLSSRSK------ 120

Query: 121 PPWRFPFPPELTNFSADAESPPTNEYFSPRAQLFGCGSNEFSCSTAMAKRFKRRKALADL 180
                                             GCG NEFS STAMAKR KRRKALADL
Sbjct: 121 ----------------------------------GCGINEFSSSTAMAKRLKRRKALADL 180

Query: 181 RVEESVLLKERLHLKKELDSLHATFKEQTTNNQKLKKIKLNLNSDASSDRVQDESKPVAS 240
           RVEES+LLKER+HLKKEL+SLHATFKEQTTNN+KLKK+KLN+N + SSD ++D SKPVAS
Sbjct: 181 RVEESLLLKERVHLKKELESLHATFKEQTTNNEKLKKMKLNMNFNTSSDHLRDMSKPVAS 240

Query: 241 SQWCRDVDPTPDNILPATSPIQTVPG------LQETQETNSMES-GGFFLPDLNMIPAED 296
           +Q C+  DPT +++ PAT P+QT PG          QE NSMES GGFFLPDLNMIPAED
Sbjct: 241 NQQCQRADPTTESV-PATLPMQTAPGNSSQSESNNRQEINSMESGGGFFLPDLNMIPAED 257

[Close]

BLAST of Carg09350-RA vs. TrEMBL
Match: tr|A0A1S3BCZ2|A0A1S3BCZ2_CUCME (uncharacterized protein LOC103488333 OS=Cucumis melo OX=3656 GN=LOC103488333 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.0e-47
Identity = 117/177 (66.10%), Postives = 125/177 (70.62%), Query Frame = 0


Query: 1   MVLKDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSRILSPSL 60
           MVLKDEW  AAMADDSVVVELLVRLKQSQASSSIKSP   VIPPRWGLRQRRSRILSP  
Sbjct: 1   MVLKDEWFCAAMADDSVVVELLVRLKQSQASSSIKSP---VIPPRWGLRQRRSRILSP-F 60

Query: 61  RYDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSKIQNLRS 120
           R+DA+AHKNKDS+STRCSPTTPLSWSG+TSPSATADGFEESSHPSEFS SSRSK      
Sbjct: 61  RFDAVAHKNKDSTSTRCSPTTPLSWSGDTSPSATADGFEESSHPSEFSLSSRSK------ 120

Query: 121 PPWRFPFPPELTNFSADAESPPTNEYFSPRAQLFGCGSNEFSCSTAMAKRFKRRKAL 178
                                             GCG NEFS STAMAKR K+++ +
Sbjct: 121 ----------------------------------GCGINEFSSSTAMAKRLKKKEGI 133

[Close]

BLAST of Carg09350-RA vs. TrEMBL
Match: tr|W9RR93|W9RR93_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003458 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 8.0e-40
Identity = 131/330 (39.70%), Postives = 173/330 (52.42%), Query Frame = 0


Query: 4   KDEWLSAAMADDSVVVELLVRLKQSQAS------SSIKSPLHAVIPPRWGLRQRRSRILS 63
           KDEW+  AM+DD +VVELLVRLKQSQA+      SS  S      P  W +R  RSR   
Sbjct: 3   KDEWMRTAMSDDMLVVELLVRLKQSQAAAASPLKSSPPSQPSPTFPLTWSVRLPRSR--- 62

Query: 64  PSLRYDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESSHPSEFSQSSRSKIQN 123
            +LR DA++ + +   STRCSPTTPLSWSG  SPSATADGFEESS PS     S+++ + 
Sbjct: 63  -ALRCDAVSQRKQGDVSTRCSPTTPLSWSGAASPSATADGFEESSRPSNNRSPSQARSKV 122

Query: 124 LRSPPWRFPFPPELTNFS------------------------------ADAESPPTNEYF 183
           L S    F FP  L  FS                                A S  +   F
Sbjct: 123 LLS---SFTFPLRLIFFSLVAMCQMYGLLTKRRFLCVDLNSDQRRLCTCLASSSVSGRVF 182

Query: 184 SPRAQLFGCGSNEFSCSTAMAKRFKRRKALADLRVEESVLLKERLHLKKELDSLHATFKE 243
           SP   +    +NE + +   ++R +R+K  A+L+ EE+ LLKER+HLK+EL  L ATFKE
Sbjct: 183 SPVQGI--ATNNELASAITTSRRSRRKKTFAELKEEENSLLKERVHLKRELAKLRATFKE 242

Query: 244 QTTNNQKLKKIKLNLNSDASSDRVQDESKPVASSQWCRDVDPTPDNILPATSPIQTVPGL 294
           Q   N  LK++KL L+ D++     D  K  +SSQ    +  T DN+  +T  +      
Sbjct: 243 QREKNDSLKRMKLELHVDSAKYVNADGFKMASSSQPQERIASTSDNV-RSTMQLAHHSNA 302

[Close]

BLAST of Carg09350-RA vs. TrEMBL
Match: tr|A0A2N9J0C5|A0A2N9J0C5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57906 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 9.7e-38
Identity = 128/296 (43.24%), Postives = 167/296 (56.42%), Query Frame = 0


Query: 1   MVLKDEWLSAAMADDSVVVELLVRLKQSQ---ASSSIKSPLHAVIPPRWGLRQRRSRILS 60
           M++ DEW+ AAM DD+VVV+LLVRLKQSQ   +SSS+KS   AV+P RWGLR  RSR   
Sbjct: 1   MMVSDEWVRAAMTDDTVVVQLLVRLKQSQTASSSSSLKSSPKAVVPLRWGLRLPRSR--P 60

Query: 61  PSLRYDAIAHKNKDSSSTRCSPTTPLSWSGETSPSATADGFEESS-HPSEFSQSSRSKIQ 120
           P++R DA++ + KD+ STRCSPTTPLSWSG  SPSATADGF++SS H S    ++RSK  
Sbjct: 61  PTMRCDAVS-RRKDADSTRCSPTTPLSWSGGASPSATADGFDDSSFHTSVSYAATRSK-- 120

Query: 121 NLRSPPWRFPFPPELTNFSADAESPPTNEYFSPRAQLFGCGSNEFSCSTAMAKRFKRRKA 180
                                                 G  +NE   STA  KR +R+K 
Sbjct: 121 --------------------------------------GTAANE---STA-TKRTRRKKT 180

Query: 181 LADLRVEESVLLKERLHLKKELDSLHATFKEQTTNNQKLKKIKLN--LNSDASSDRVQDE 240
            A+L+ EES LLKER++L+KEL +L  TFKEQ   N+ LK++KL+  L+S        D 
Sbjct: 181 FAELKEEESSLLKERMNLRKELATLRVTFKEQRVRNESLKRMKLDLGLHSAMILSGTCDG 240

Query: 241 SKPVASSQWCRDVDPTPDNILPATSPIQTVPGLQETQETNSMESGGFFLPDLNMIP 291
           S+   S +  + V  T D+ L + S         E  +  S     F LPDLNM+P
Sbjct: 241 SEKAVSREPYQRVQGTSDDGLQSDS--------CEADKAASPGGSSFLLPDLNMMP 241

[Close]

BLAST of Carg09350-RA vs. TrEMBL
Match: tr|A0A2C9UBF7|A0A2C9UBF7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G126300 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 5.0e-34
Identity = 120/303 (39.60%), Postives = 159/303 (52.48%), Query Frame = 0


Query: 2   VLKDEWLSAAMADDSVVVELLVRLKQSQASSSIKSPLHAVIPPRWGLRQRRSR-ILSPSL 61
           ++KDEW+ AAM DD VVVELLVRLKQ  A   +K    AVIP RWGLR  RS+   + S+
Sbjct: 1   MVKDEWIRAAMTDDRVVVELLVRLKQEAA--QVKP--QAVIPLRWGLRLPRSKPATAASM 60

Query: 62  RYDAIAHKNKDSSSTRCSPTTPLSWS--GETSPSATADGFEESS-HPSEFSQSSRSKIQN 121
           RY+ +  + +  SS RCSPTTPLSWS  G  SPSATADGFEE+S H    +  +RSK+  
Sbjct: 61  RYEVVCRRKEGDSSARCSPTTPLSWSGGGGASPSATADGFEETSPHVICSTPGARSKV-- 120

Query: 122 LRSPPWRFPFPPELTNFSADAESPPTNEYFSPRAQLFGCGSNEFSCSTAMAKRFKRRKAL 181
                            +A  E+             F                       
Sbjct: 121 -----------------TATGETASXXXXXXXXXXXF----------------------- 180

Query: 182 ADLRVEESVLLKERLHLKKELDSLHATFKEQTTNNQKLKKIKLNLNSD--ASSDRVQDES 241
           A+L+ EESVLLKER+HLKKEL +++ATFKEQ   N+ LK++K++L+     +S  + D  
Sbjct: 181 AELKEEESVLLKERMHLKKELATINATFKEQIERNENLKRLKIDLSLQFAKTSSSLSDLL 240

Query: 242 KPVASSQWCRDVDPTPDNI-----LPATSPIQTVPGLQETQETNSMESGGFFLPDLNMIP 294
                +Q C+    +P++I     + A     T     E QET S     F LPDLNM+P
Sbjct: 241 DKAICNQPCKREPSSPNHISSMSNMHAQDDDNTESDSCERQETVSNHDRSFLLPDLNMMP 257

The following BLAST results are available for this feature:

BLAST of Carg09350-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962277.1	1.5e-127	84.75	uncharacterized protein LOC111462771 [Cucurbita moschata]	[more]
XP_023547221.1	4.9e-126	84.07	uncharacterized protein LOC111806097 [Cucurbita pepo subsp. pepo]	[more]
XP_022996628.1	3.9e-123	83.73	uncharacterized protein LOC111491811 [Cucurbita maxima]	[more]
XP_004138712.1	2.2e-94	68.21	PREDICTED: uncharacterized protein LOC101213579 isoform X1 [Cucumis sativus] >KG...	[more]
XP_022131287.1	1.4e-91	67.55	uncharacterized protein LOC111004554 [Momordica charantia]	[more]

BLAST of Carg09350-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32030.1	3.1e-21	31.51	unknown protein	[more]
AT1G15800.1	4.7e-14	29.57	unknown protein	[more]
AT5G25210.1	1.5e-12	40.48	unknown protein	[more]
AT1G80610.1	1.3e-08	37.10	unknown protein	[more]

BLAST of Carg09350-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg09350-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LQC4\|A0A0A0LQC4_CUCSA	1.5e-94	68.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382500 PE=4 SV=1	[more]
tr\|A0A1S3BCZ2\|A0A1S3BCZ2_CUCME	1.0e-47	66.10	uncharacterized protein LOC103488333 OS=Cucumis melo OX=3656 GN=LOC103488333 PE=...	[more]
tr\|W9RR93\|W9RR93_9ROSA	8.0e-40	39.70	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003458 PE=4 SV=1	[more]
tr\|A0A2N9J0C5\|A0A2N9J0C5_FAGSY	9.7e-38	43.24	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57906 PE=4 SV=1	[more]
tr\|A0A2C9UBF7\|A0A2C9UBF7_MANES	5.0e-34	39.60	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G126300 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg09350	Carg09350	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09350-RA.three_prime_UTR.1	Carg09350-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09350-RA.CDS.6	Carg09350-RA.CDS.6	CDS
Carg09350-RA.CDS.5	Carg09350-RA.CDS.5	CDS
Carg09350-RA.CDS.4	Carg09350-RA.CDS.4	CDS
Carg09350-RA.CDS.3	Carg09350-RA.CDS.3	CDS
Carg09350-RA.CDS.2	Carg09350-RA.CDS.2	CDS
Carg09350-RA.CDS.1	Carg09350-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09350-RA.five_prime_UTR.1	Carg09350-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09350-RA.exon.6	Carg09350-RA.exon.6	exon
Carg09350-RA.exon.5	Carg09350-RA.exon.5	exon
Carg09350-RA.exon.4	Carg09350-RA.exon.4	exon
Carg09350-RA.exon.3	Carg09350-RA.exon.3	exon
Carg09350-RA.exon.2	Carg09350-RA.exon.2	exon
Carg09350-RA.exon.1	Carg09350-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg09350-RA	Carg09350-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..247
None	No IPR available	PANTHER	PTHR35099:SF3	SUBFAMILY NOT NAMED	coord: 163..293
None	No IPR available	PANTHER	PTHR35099:SF3	SUBFAMILY NOT NAMED	coord: 1..116
None	No IPR available	PANTHER	PTHR35099	FAMILY NOT NAMED	coord: 163..293
None	No IPR available	PANTHER	PTHR35099	FAMILY NOT NAMED	coord: 1..116