Carg08858-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08858-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transcription repressor KAN1
Location	Cucurbita_argyrosperma_scaffold_020 : 437496 .. 441090 (+)
Sequence length	1361

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTATTCCCTGCACAGCCGGATTTGTCGCTCCAAATTAGCCCTCCCAATACAAATAAACCCTCTTCCACTTGGAGAACAACAGCACCCTCTCAAGAACATCTTGATTTGGGGTTTTGGAATAATCTCAATTTGGAGTCTGCTAAACCCACTCCCAAACATCACCCTACTAATCAACACTTTGATCTCTCCCTTTCCAACTTCACTCAAATTAACCAATACTCCAATATTCCTCCTCCTCCGCCTCCTCCTCTTCCTCACCACCACCACCACCCTGCCTTCCACGGCGGCGCTCACCTCTTCCAAACCCTACACAAAACCCACCACCCACCCACCATTTTCCACCACACTCCTCCGCCACCACCCACCACATCGCACCCTTTTCCAGGACAGAACAATGTTCAAGACTTGGCCTTTTTGCGACCCATTAGAGGAATTCCGGTGTACCATCAGACAACTAACCCCGCCGGCACTCCCTCCCCCATCGCTCCCTCCGCCAGCGGCCACGGCCAGATAATGATGCGATCCAGATTCTTGTCTAGGTTTCCGGCCAAACGCAGCATGAGAGCCCCAAGGATGCGATGGACTTCCACTCTCCATGCTCGCTTTGTTCATGCTGTTGAACTCCTCGGCGGCCATGAAAGTATTCACTTTTCCTTTACCCTCAAAACCATATTACTTTTCCCGTGATGGGTTACGATAAATTTAATTATTTCTTTACATTTCGGCTACCAGGAGCGACGCCCAAGTCGGTTCTCGAGCTTATGGATGTCAAAGATCTAACCTTAGCCCATGTCAAATCTCATTTACAGGTATGCAACTCATAATCTCTTGATCTAAACCAAAATCCCATTTCAAAAATTTCTTTAAAAAATTACACAAAACTCAAATTAGGGTTAAGTTTGGGTAAGAAAATCAAAATCAAAGTGATTTCAATGCGTGGAGTGTGGCGATTGCATAAATGAAGATGGGGTTTTGCATCGTTGTTACATCCTTAATTAATTCGTGGCAGGAAGTTTGTCGAGTGGAAATCAAGTTTTGTTTTTTTTTTTTTTTTTTTTTTTAATAAAGACATGTTTTTTTTTTTTTTTTTTTTTCAAATTCCAATCGGTTCTTTTTCTTTTTTTTTTTATTTTAATATTTTCTGTGGAGGAGCTCAAATTCTTAGCTTTTCATTTTCTTCTAGATCTGATGGTATACTGCTTCTGCTAGCTAATCAAACAGCTTTTTGCTTGGGAGAATGAGCCATACCAACTATGAGTAAAATTATTATTATTATTTTTTAAAAAAAATAATAATAATAAAAGAAATTCAACTGTAACACATGCACACAAGACAAGGTAGCTCAGAGAGACTGTTTTCCAGTTGACAAGGCTTTGAAGAGTAAATGAAAGAAGTGGTAGCTGTTAAAATTTAATGTAAATTAAATACTTTTTTTTGTTTTAATCATTGAAGTCTTCAAACATCTAGGGATAAGTGTTTGTGTGGTTTAAACAAAAACATAACTATGTTTTTTTAGCTCAAAAATGTCTTGTTTTTTTTATTTTTAAATCCACATGTTTTTTTTTTAAATACATATATATAATTTACTCCCAAAATTAGTTGATATGAAGCTTTCATGTATAGTACTTGAAATGGGTGTATTTATATGTCCAAAAAAACATCAATGGAGTGAGTGTTGAGTGAGTGAGTGAGTGAGAGGAAGAAAACAAAAGCAAATAGAATAACCCATCATTACTCAATCATAGCTTCTTCAAAATCATTTCTGTTTTATTTTTATTTTCTTTTTAATTAACCAAACCTCCATAACTATGATTATATTCCATTTTTGGGGTTTTTTTTATAGCTATTTTTGTTTAAATAATCCAATAAAAACCCACTTTTAAATCTTATAATACCATAAAATTCCCATTGCAGATGTACCGTACAGTGAAGACCACAGACAGAGCAGCAGCTTCTTCAGGTGATTTTTTTTTTCCTTTTTTTTTTTACACCGTCTGGACTGACCCATTTTCTTCTTCTAGTTCTATATAAAGTATAACACAATGAATATGTACAACAGGGCAATCAGCACTATATTATACGAGAATGCTTCATCAGGGGACACGAGCAATATTGAAGATATAATATTTGACATTCAAAAGCCAAGCATGGGAAGGCAAAATGAGCACTCAGTTCAACAAAATAGGCAAAACCCTCATCAAGATAAGGATTATCATGCCCTCTGGAGCAATTCTTCCAGGTATAATTCCCTTTCTCACTTCCTTTTTCATATTCAAACCCATAGTTTTGGAAGATTTCAACTTGAATTCTTGTGGGTTGATTTATAATACAAAGGGAAAATGATGTAATAGTCTAAGCCCACTGTTTCATTCTCCTCCTAAACCCACGTGGGATTTCACAATCCACCCCTTTAGGTCCTAGCGTGCTTCTTTGCACACTACCTTGTGTCCACTCCCTTCAGTGCTCAACCTCCCTGTTGGCACATTGCCTAGTGTCTGACTCTGATACCATTTGTAACAGTTCAAACCCTCTGCTTGTGGATATCGTCATCAAAAACTCCATGATGAGGCAATTATAAACATAGTGTCTTGAAATTTGTGTGGTTTGGATTTTGTGGGGCTTCACCATATTCAAAATAATTGGAGATGAAATAAGAAACTTAGTGTGAAAGGTAAGGGGTTTTGATGGAGGCATTAGTGGAAATTTTGATGCCTAAAAACAAAGCTTTTTTTGTTTGAAAAATTCCTCGTAGTTTGTGATTATAGTAATGGGGTGTCACATGGAGGTGGTGTAGCTTTATATCAATCAAAAGCACCAAATGCAAAGCCAAAAAGATTTGTAGCTTTCTTTTTCTTTTTTATATACTCTGCATGGTTTATTATGGTTTCCGCTGATTGAAGATATGCTTTTTCCCTTTCTTTCTTGTGTTTTGGTTATGTCACAGGGAAGCTTGGTTGCATGGTTTTCCTAATGATTCTTCTAGGGACCTTTCATCGTCCCTCGAGGTACTCCTTCTTCTCTCTCCTTCTCGATACCATATATCTTAACACACAAGACTCGAACGTACGTTCTAAACAAATTTAGGGTCATTGTGGACTCCGAGATTGATTTGAGTTGTCAAATCAAGAACATACGAACTAGTTTATTGCTTCATATTTTTAGTCTCGTGTCGGTTTTGAGCTCATTATTGATAGTAATCCACGTTTTTTTTTTGTTTGTTTGTTTTGCAGAATGACGTGGATCCAAAGAGCTCAAACAACGAAAGACTATCGGAGATAAGCTCGTCGGGGAATCTTCCTCAGAAACCTAATTTGGAATTCACATTAGGAAGGGCAGTTTGATGAACATAACATTATATGTGTGAGAACAGAAATTGAAGTGAAGTTGGAGCCTCTGAAGAACAAAAAAAGAAATTGATTTTAAAGAAAAAGAAAGAAAGAAAAAAAAGAGAGAGGTAAAGAAAGACAAGCAGACAAGAAAAAAAAGACAAAAAGCAACAAAAGCAGATCCTAATTCCCATCAACCTTTGAGGTCCCAAATCATCTTATTTTATTTCAGCAAATCAAATATATGAATCTAATTGATTTTT

mRNA sequence

ATGGAGCTATTCCCTGCACAGCCGGATTTGTCGCTCCAAATTAGCCCTCCCAATACAAATAAACCCTCTTCCACTTGGAGAACAACAGCACCCTCTCAAGAACATCTTGATTTGGGGTTTTGGAATAATCTCAATTTGGAGTCTGCTAAACCCACTCCCAAACATCACCCTACTAATCAACACTTTGATCTCTCCCTTTCCAACTTCACTCAAATTAACCAATACTCCAATATTCCTCCTCCTCCGCCTCCTCCTCTTCCTCACCACCACCACCACCCTGCCTTCCACGGCGGCGCTCACCTCTTCCAAACCCTACACAAAACCCACCACCCACCCACCATTTTCCACCACACTCCTCCGCCACCACCCACCACATCGCACCCTTTTCCAGGACAGAACAATGTTCAAGACTTGGCCTTTTTGCGACCCATTAGAGGAATTCCGGTGTACCATCAGACAACTAACCCCGCCGGCACTCCCTCCCCCATCGCTCCCTCCGCCAGCGGCCACGGCCAGATAATGATGCGATCCAGATTCTTGTCTAGGTTTCCGGCCAAACGCAGCATGAGAGCCCCAAGGATGCGATGGACTTCCACTCTCCATGCTCGCTTTGTTCATGCTGTTGAACTCCTCGGCGGCCATGAAAGAGCGACGCCCAAGTCGGTTCTCGAGCTTATGGATGTCAAAGATCTAACCTTAGCCCATGTCAAATCTCATTTACAGTTCTATATAAAGTATAACACAATGAATATGTACAACAGGGCAATCAGCACTATATTATACGAGAATGCTTCATCAGGGGACACGAGCAATATTGAAGATATAATATTTGACATTCAAAAGCCAAGCATGGGAAGGCAAAATGAGCACTCAGTTCAACAAAATAGGCAAAACCCTCATCAAGATAAGGATTATCATGCCCTCTGGAGCAATTCTTCCAGGGAAGCTTGGTTGCATGGTTTTCCTAATGATTCTTCTAGGGACCTTTCATCGTCCCTCGAGAATGACGTGGATCCAAAGAGCTCAAACAACGAAAGACTATCGGAGATAAGCTCGTCGGGGAATCTTCCTCAGAAACCTAATTTGGAATTCACATTAGGAAGGGCAGTTTGATGAACATAACATTATATGTGTGAGAACAGAAATTGAAGTGAAGTTGGAGCCTCTGAAGAACAAAAAAAGAAATTGATTTTAAAGAAAAAGAAAGAAAGAAAAAAAAGAGAGAGGTAAAGAAAGACAAGCAGACAAGAAAAAAAAGACAAAAAGCAACAAAAGCAGATCCTAATTCCCATCAACCTTTGAGGTCCCAAATCATCTTATTTTATTTCAGCAAATCAAATATATGAATCTAATTGATTTTT

Coding sequence (CDS)

ATGGAGCTATTCCCTGCACAGCCGGATTTGTCGCTCCAAATTAGCCCTCCCAATACAAATAAACCCTCTTCCACTTGGAGAACAACAGCACCCTCTCAAGAACATCTTGATTTGGGGTTTTGGAATAATCTCAATTTGGAGTCTGCTAAACCCACTCCCAAACATCACCCTACTAATCAACACTTTGATCTCTCCCTTTCCAACTTCACTCAAATTAACCAATACTCCAATATTCCTCCTCCTCCGCCTCCTCCTCTTCCTCACCACCACCACCACCCTGCCTTCCACGGCGGCGCTCACCTCTTCCAAACCCTACACAAAACCCACCACCCACCCACCATTTTCCACCACACTCCTCCGCCACCACCCACCACATCGCACCCTTTTCCAGGACAGAACAATGTTCAAGACTTGGCCTTTTTGCGACCCATTAGAGGAATTCCGGTGTACCATCAGACAACTAACCCCGCCGGCACTCCCTCCCCCATCGCTCCCTCCGCCAGCGGCCACGGCCAGATAATGATGCGATCCAGATTCTTGTCTAGGTTTCCGGCCAAACGCAGCATGAGAGCCCCAAGGATGCGATGGACTTCCACTCTCCATGCTCGCTTTGTTCATGCTGTTGAACTCCTCGGCGGCCATGAAAGAGCGACGCCCAAGTCGGTTCTCGAGCTTATGGATGTCAAAGATCTAACCTTAGCCCATGTCAAATCTCATTTACAGTTCTATATAAAGTATAACACAATGAATATGTACAACAGGGCAATCAGCACTATATTATACGAGAATGCTTCATCAGGGGACACGAGCAATATTGAAGATATAATATTTGACATTCAAAAGCCAAGCATGGGAAGGCAAAATGAGCACTCAGTTCAACAAAATAGGCAAAACCCTCATCAAGATAAGGATTATCATGCCCTCTGGAGCAATTCTTCCAGGGAAGCTTGGTTGCATGGTTTTCCTAATGATTCTTCTAGGGACCTTTCATCGTCCCTCGAGAATGACGTGGATCCAAAGAGCTCAAACAACGAAAGACTATCGGAGATAAGCTCGTCGGGGAATCTTCCTCAGAAACCTAATTTGGAATTCACATTAGGAAGGGCAGTTTGA

Protein sequence

MELFPAQPDLSLQISPPNTNKPSSTWRTTAPSQEHLDLGFWNNLNLESAKPTPKHHPTNQHFDLSLSNFTQINQYSNIPPPPPPPLPHHHHHPAFHGGAHLFQTLHKTHHPPTIFHHTPPPPPTTSHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQFYIKYNTMNMYNRAISTILYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLPQKPNLEFTLGRAV

Homology

[Close]

BLAST of Carg08858-RA vs. NCBI nr
Match: XP_022931215.1 (probable transcription factor KAN2 isoform X2 [Cucurbita moschata])

HSP 1 Score: 592.4 bits (1526), Expect = 1.0e-165
Identity = 355/370 (95.95%), Postives = 357/370 (96.49%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTAPSQEHLDLGFWNNLNLESAKPTPKHHPTNQ 60
           MELFPAQPDLSLQISPPNTNKPSSTWRTT PSQEHLDLGFWNNLNLESAKPTPKHHPTNQ
Sbjct: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTTPSQEHLDLGFWNNLNLESAKPTPKHHPTNQ 60

Query: 61  HFDLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           HFDLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  HFDLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL 180
           XXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL
Sbjct: 121 XXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL 180

Query: 181 SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 240
           SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL
Sbjct: 181 SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 240

Query: 241 QFYIKYNTMNMYNRAISTILYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPH 300
           Q Y    T +    A S+ LYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPH
Sbjct: 241 QMYRTVKTTD--RAAASSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPH 300

Query: 301 QDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLPQKP 360
           QDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLPQKP
Sbjct: 301 QDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLPQKP 360

Query: 361 NLEFTLGRAV 371
           NLEFTLGRAV
Sbjct: 361 NLEFTLGRAV 368

[Close]

BLAST of Carg08858-RA vs. NCBI nr
Match: XP_022931214.1 (probable transcription factor KAN2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 589.3 bits (1518), Expect = 8.8e-165
Identity = 355/374 (94.92%), Postives = 359/374 (95.99%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTAPSQEHLDLGFWNNLNLESAKPTPKHHPTNQ 60
           MELFPAQPDLSLQISPPNTNKPSSTWRTT PSQEHLDLGFWNNLNLESAKPTPKHHPTNQ
Sbjct: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTTPSQEHLDLGFWNNLNLESAKPTPKHHPTNQ 60

Query: 61  HFDLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           HFDLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  HFDLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL 180
           XXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL
Sbjct: 121 XXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL 180

Query: 181 SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 240
           SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL
Sbjct: 181 SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 240

Query: 241 QFYIKYNTMNMYNRAISTI----LYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNR 300
           Q    Y T+   +RA ++     LYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNR
Sbjct: 241 QM---YRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNR 300

Query: 301 QNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNL 360
           QNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNL
Sbjct: 301 QNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNL 360

Query: 361 PQKPNLEFTLGRAV 371
           PQKPNLEFTLGRAV
Sbjct: 361 PQKPNLEFTLGRAV 371

[Close]

BLAST of Carg08858-RA vs. NCBI nr
Match: XP_022996129.1 (probable transcription factor KAN2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 584.7 bits (1506), Expect = 2.2e-163
Identity = 341/370 (92.16%), Postives = 345/370 (93.24%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTAPSQEHLDLGFWNNLNLESAKPTPKHHPTNQ 60
           MELFPAQPDLSLQISPPNTNKPSSTWRTT PSQEHLDLGFWNNLNLESAKPTPKHHPTN 
Sbjct: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTTPSQEHLDLGFWNNLNLESAKPTPKHHPTNH 60

Query: 61  HFDLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           HFDLSLSNFTQINQYSNI XXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXXX
Sbjct: 61  HFDLSLSNFTQINQYSNIPXXXXXXXXXXXXXXXXLHGGAHLFQXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL 180
           XXXXXX PFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL
Sbjct: 121 XXXXXXXPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL 180

Query: 181 SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 240
           SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL
Sbjct: 181 SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 240

Query: 241 QFYIKYNTMNMYNRAISTILYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPH 300
           Q Y    T +    A S+ LYENASSGDTSNIEDIIFDIQKP+MGRQNEHSVQQNRQNPH
Sbjct: 241 QMYRTVKTTD--RAAASSDLYENASSGDTSNIEDIIFDIQKPTMGRQNEHSVQQNRQNPH 300

Query: 301 QDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLPQKP 360
           QDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGN+PQKP
Sbjct: 301 QDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNVPQKP 360

Query: 361 NLEFTLGRAV 371
           NLEFTLGRAV
Sbjct: 361 NLEFTLGRAV 368

[Close]

BLAST of Carg08858-RA vs. NCBI nr
Match: XP_022996128.1 (probable transcription factor KAN2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 581.6 bits (1498), Expect = 1.8e-162
Identity = 341/374 (91.18%), Postives = 347/374 (92.78%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTAPSQEHLDLGFWNNLNLESAKPTPKHHPTNQ 60
           MELFPAQPDLSLQISPPNTNKPSSTWRTT PSQEHLDLGFWNNLNLESAKPTPKHHPTN 
Sbjct: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTTPSQEHLDLGFWNNLNLESAKPTPKHHPTNH 60

Query: 61  HFDLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           HFDLSLSNFTQINQYSNI XXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXXX
Sbjct: 61  HFDLSLSNFTQINQYSNIPXXXXXXXXXXXXXXXXLHGGAHLFQXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL 180
           XXXXXX PFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL
Sbjct: 121 XXXXXXXPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL 180

Query: 181 SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 240
           SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL
Sbjct: 181 SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 240

Query: 241 QFYIKYNTMNMYNRAISTI----LYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNR 300
           Q    Y T+   +RA ++     LYENASSGDTSNIEDIIFDIQKP+MGRQNEHSVQQNR
Sbjct: 241 QM---YRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPTMGRQNEHSVQQNR 300

Query: 301 QNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNL 360
           QNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGN+
Sbjct: 301 QNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNV 360

Query: 361 PQKPNLEFTLGRAV 371
           PQKPNLEFTLGRAV
Sbjct: 361 PQKPNLEFTLGRAV 371

[Close]

BLAST of Carg08858-RA vs. NCBI nr
Match: XP_022931216.1 (probable transcription factor KAN2 isoform X3 [Cucurbita moschata])

HSP 1 Score: 581.3 bits (1497), Expect = 2.4e-162
Identity = 350/370 (94.59%), Postives = 351/370 (94.86%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTAPSQEHLDLGFWNNLNLESAKPTPKHHPTNQ 60
           MELFPAQPDLSLQISPPNTNKPSSTWRTT PSQEHLDLGFWNNLNLESAKPTPKHHPTNQ
Sbjct: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTTPSQEHLDLGFWNNLNLESAKPTPKHHPTNQ 60

Query: 61  HFDLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           HFDLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  HFDLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL 180
           XXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL
Sbjct: 121 XXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPSASGHGQIMMRSRFL 180

Query: 181 SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 240
           SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL
Sbjct: 181 SRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 240

Query: 241 QFYIKYNTMNMYNRAISTILYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPH 300
           Q Y          R + T     ASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPH
Sbjct: 241 QMY----------RTVKTTDRAAASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPH 300

Query: 301 QDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLPQKP 360
           QDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLPQKP
Sbjct: 301 QDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLSEISSSGNLPQKP 360

Query: 361 NLEFTLGRAV 371
           NLEFTLGRAV
Sbjct: 361 NLEFTLGRAV 360

[Close]

BLAST of Carg08858-RA vs. TAIR10
Match: AT1G32240.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 207.6 bits (527), Expect = 1.3e-53
Identity = 185/433 (42.73%), Postives = 224/433 (51.73%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNTNKPSSTW---RTTAPSQEH--LDLGFWNNLNLESAKPTPKH 60
           MELFPAQPDLSLQISPPN +KPSSTW   R+T   ++H  LDLGFW    L+S   +   
Sbjct: 1   MELFPAQPDLSLQISPPN-SKPSSTWQRRRSTTDQEDHEELDLGFWRRA-LDSRTSSLVS 60

Query: 61  HPTNQHF-----DLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           + T++       DLSLSN +                               XXXXXXXXX
Sbjct: 61  NSTSKTINHPFQDLSLSNIS-------------------------------XXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXHPFPGQNNVQDL---------AFLRPIRGIPVYH---------- 180
           XXXX              FP Q   Q L           LRPIRGIP+YH          
Sbjct: 121 XXXXLPNCNSSNILTSFQFPTQQQQQHLQGFLAHDLNTHLRPIRGIPLYHXXXXXXXXXX 180

Query: 181 --------------------------QTTNPAGTPSPIAPSASGHGQIMMRSRFLSRFPA 240
                                                           + R+RF+ RFPA
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNRARFMPRFPA 240

Query: 241 KRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQFYIK 300
           KRSMRAPRMRWT+TLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ    
Sbjct: 241 KRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM--- 300

Query: 301 YNTMNMYNRAISTI----LYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQ 360
           Y T+   ++A ++     +YEN SSGD +N +D +FD+ + S  R +E        NP +
Sbjct: 301 YRTVKTTDKAAASSGQSDVYENGSSGD-NNSDDWMFDMNRKS--RDSEELT-----NPLE 360

Query: 361 DKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLS--EISS---SGNL 370
               + LW+NSS EA LHG   D+  ++    E ++D K S+ ER+S  E+SS   SG  
Sbjct: 361 KS--NGLWTNSSGEARLHGKLIDNVAEIMLPSEKELDGKCSSYERISSEEMSSSSISGTS 387

[Close]

BLAST of Carg08858-RA vs. TAIR10
Match: AT5G16560.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 150.2 bits (378), Expect = 2.5e-36
Identity = 99/209 (47.37%), Postives = 122/209 (58.37%), Query Frame = 0


Query: 174 MMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTL 233
           M+RSRFL + P KRSMRAPRMRWTS+LHARFVHAVELLGGHERATPKSVLELMDVKDLTL
Sbjct: 202 MIRSRFLPKMPTKRSMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTL 261

Query: 234 AHVKSHLQFYIKYNTMNMYNRAISTILYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQ 293
           AHVKSHLQ Y    T N           + A+S D S  E++  +  +       +   Q
Sbjct: 262 AHVKSHLQMYRTVKTTN-----------KPAASSDGSGEEEMGINGNEVHHQSSTDQRAQ 321

Query: 294 QNRQNPHQDKDYHAL---WSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLS-- 353
            +  + HQ+ D  +    WSNSSRE W     N+ S D+ + +        S+ +R S  
Sbjct: 322 SDDTSLHQETDISSTQPRWSNSSRETW--PLSNNCSSDIDTMIRTSSTSMISHYQRSSIQ 381

Query: 354 --------EISSSGNLP-QKPNLEFTLGR 369
                   +    GNL  + P+LEFTLGR
Sbjct: 382 NQEQRSNDQAKRCGNLSCENPSLEFTLGR 397

[Close]

BLAST of Carg08858-RA vs. TAIR10
Match: AT4G17695.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 125.2 bits (313), Expect = 8.6e-29
Identity = 103/262 (39.31%), Postives = 133/262 (50.76%), Query Frame = 0


Query: 134 NVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPS----ASGHGQIMMRSRFLS-------- 193
           +++ +  +RPIRGIP+Y          S  +P+    +  +GQ   R    +        
Sbjct: 83  DLRSIFMMRPIRGIPLYQNQVLDHYYYSSTSPNPFFFSEVNGQHASRRLITNPNCSFNLH 142

Query: 194 ------------RFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVK 253
                       RF AKR +RAPRMRWT+TLHA FVHAV+LLGGHERATPKSVLELMDV+
Sbjct: 143 NRHRRQAQPQPPRFTAKRGVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQ 202

Query: 254 DLTLAHVKSHLQFYIKYNTMNMYNRAISTILYENASSGDTSNIEDIIFDIQKPSMGRQNE 313
           DLTLAHVKSHLQ Y          R I +      SSG +                   E
Sbjct: 203 DLTLAHVKSHLQMY----------RTIKSTEKPTTSSGQS-----------------DCE 262

Query: 314 HSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSR-DLSSSLENDVDPKSSNNERLS 367
           +  Q N +   + ++   LW+NSS EA        SS  D+SS+     + +  +NERLS
Sbjct: 263 NGSQVNSE--REARNLTGLWNNSSSEARFQLKAKASSGVDISSNENEWKNRRCPSNERLS 315

[Close]

BLAST of Carg08858-RA vs. TAIR10
Match: AT5G42630.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-24
Identity = 53/58 (91.38%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 186 KRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQFY 244
           KRS+RAPRMRWTSTLHA FVHAV+LLGGHERATPKSVLELM+VKDLTLAHVKSHLQ Y
Sbjct: 100 KRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMY 157

[Close]

BLAST of Carg08858-RA vs. TAIR10
Match: AT2G02060.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 82.0 bits (201), Expect = 8.3e-16
Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 192 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQFY 244
           PR+RWT  LH  FVHAVE+LGG  RATPK VL++MDVK LT++HVKSHLQ Y
Sbjct: 30  PRLRWTPDLHRCFVHAVEILGGQHRATPKLVLKMMDVKGLTISHVKSHLQMY 81

[Close]

BLAST of Carg08858-RA vs. Swiss-Prot
Match: sp|Q9C616|KAN2_ARATH (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.4e-52
Identity = 185/433 (42.73%), Postives = 224/433 (51.73%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNTNKPSSTW---RTTAPSQEH--LDLGFWNNLNLESAKPTPKH 60
           MELFPAQPDLSLQISPPN +KPSSTW   R+T   ++H  LDLGFW    L+S   +   
Sbjct: 1   MELFPAQPDLSLQISPPN-SKPSSTWQRRRSTTDQEDHEELDLGFWRRA-LDSRTSSLVS 60

Query: 61  HPTNQHF-----DLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           + T++       DLSLSN +                               XXXXXXXXX
Sbjct: 61  NSTSKTINHPFQDLSLSNIS-------------------------------XXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXHPFPGQNNVQDL---------AFLRPIRGIPVYH---------- 180
           XXXX              FP Q   Q L           LRPIRGIP+YH          
Sbjct: 121 XXXXLPNCNSSNILTSFQFPTQQQQQHLQGFLAHDLNTHLRPIRGIPLYHXXXXXXXXXX 180

Query: 181 --------------------------QTTNPAGTPSPIAPSASGHGQIMMRSRFLSRFPA 240
                                                           + R+RF+ RFPA
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNRARFMPRFPA 240

Query: 241 KRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQFYIK 300
           KRSMRAPRMRWT+TLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ    
Sbjct: 241 KRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM--- 300

Query: 301 YNTMNMYNRAISTI----LYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNRQNPHQ 360
           Y T+   ++A ++     +YEN SSGD +N +D +FD+ + S  R +E        NP +
Sbjct: 301 YRTVKTTDKAAASSGQSDVYENGSSGD-NNSDDWMFDMNRKS--RDSEELT-----NPLE 360

Query: 361 DKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLS--EISS---SGNL 370
               + LW+NSS EA LHG   D+  ++    E ++D K S+ ER+S  E+SS   SG  
Sbjct: 361 KS--NGLWTNSSGEARLHGKLIDNVAEIMLPSEKELDGKCSSYERISSEEMSSSSISGTS 387

[Close]

BLAST of Carg08858-RA vs. Swiss-Prot
Match: sp|Q93WJ9|KAN1_ARATH (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.5e-35
Identity = 99/209 (47.37%), Postives = 122/209 (58.37%), Query Frame = 0


Query: 174 MMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTL 233
           M+RSRFL + P KRSMRAPRMRWTS+LHARFVHAVELLGGHERATPKSVLELMDVKDLTL
Sbjct: 202 MIRSRFLPKMPTKRSMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTL 261

Query: 234 AHVKSHLQFYIKYNTMNMYNRAISTILYENASSGDTSNIEDIIFDIQKPSMGRQNEHSVQ 293
           AHVKSHLQ Y    T N           + A+S D S  E++  +  +       +   Q
Sbjct: 262 AHVKSHLQMYRTVKTTN-----------KPAASSDGSGEEEMGINGNEVHHQSSTDQRAQ 321

Query: 294 QNRQNPHQDKDYHAL---WSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLS-- 353
            +  + HQ+ D  +    WSNSSRE W     N+ S D+ + +        S+ +R S  
Sbjct: 322 SDDTSLHQETDISSTQPRWSNSSRETW--PLSNNCSSDIDTMIRTSSTSMISHYQRSSIQ 381

Query: 354 --------EISSSGNLP-QKPNLEFTLGR 369
                   +    GNL  + P+LEFTLGR
Sbjct: 382 NQEQRSNDQAKRCGNLSCENPSLEFTLGR 397

[Close]

BLAST of Carg08858-RA vs. Swiss-Prot
Match: sp|Q0J235|ROLL9_ORYSJ (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 1.4e-28
Identity = 62/69 (89.86%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 175 MRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLA 234
           + SRF+ + PAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLA
Sbjct: 308 LASRFMPKLPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLA 367

Query: 235 HVKSHLQFY 244
           HVKSHLQ Y
Sbjct: 368 HVKSHLQMY 376

[Close]

BLAST of Carg08858-RA vs. Swiss-Prot
Match: sp|Q941I2|KAN3_ARATH (Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.5e-27
Identity = 103/262 (39.31%), Postives = 133/262 (50.76%), Query Frame = 0


Query: 134 NVQDLAFLRPIRGIPVYHQTTNPAGTPSPIAPS----ASGHGQIMMRSRFLS-------- 193
           +++ +  +RPIRGIP+Y          S  +P+    +  +GQ   R    +        
Sbjct: 83  DLRSIFMMRPIRGIPLYQNQVLDHYYYSSTSPNPFFFSEVNGQHASRRLITNPNCSFNLH 142

Query: 194 ------------RFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVK 253
                       RF AKR +RAPRMRWT+TLHA FVHAV+LLGGHERATPKSVLELMDV+
Sbjct: 143 NRHRRQAQPQPPRFTAKRGVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQ 202

Query: 254 DLTLAHVKSHLQFYIKYNTMNMYNRAISTILYENASSGDTSNIEDIIFDIQKPSMGRQNE 313
           DLTLAHVKSHLQ Y          R I +      SSG +                   E
Sbjct: 203 DLTLAHVKSHLQMY----------RTIKSTEKPTTSSGQS-----------------DCE 262

Query: 314 HSVQQNRQNPHQDKDYHALWSNSSREAWLHGFPNDSSR-DLSSSLENDVDPKSSNNERLS 367
           +  Q N +   + ++   LW+NSS EA        SS  D+SS+     + +  +NERLS
Sbjct: 263 NGSQVNSE--REARNLTGLWNNSSSEARFQLKAKASSGVDISSNENEWKNRRCPSNERLS 315

[Close]

BLAST of Carg08858-RA vs. Swiss-Prot
Match: sp|Q9FJV5|KAN4_ARATH (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.0e-23
Identity = 53/58 (91.38%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 186 KRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQFY 244
           KRS+RAPRMRWTSTLHA FVHAV+LLGGHERATPKSVLELM+VKDLTLAHVKSHLQ Y
Sbjct: 100 KRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMY 157

[Close]

BLAST of Carg08858-RA vs. TrEMBL
Match: tr|A0A1S4E5K0|A0A1S4E5K0_CUCME (probable transcription factor KAN2 OS=Cucumis melo OX=3656 GN=LOC103503571 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.8e-119
Identity = 264/406 (65.02%), Postives = 283/406 (69.70%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNTNKPSSTWRT----TAPSQEHLDLGFWNNLNLESAKPTPKHH 60
           MELFPAQPDLSLQISPPNTNKPSS+WR+           +DL FWNN      K TPKHH
Sbjct: 1   MELFPAQPDLSLQISPPNTNKPSSSWRSRXXXXXXXXXDVDLEFWNN------KSTPKHH 60

Query: 61  PTNQH----FDLSLSNFTQIN--QYSNI----------XXXXXXXXXXXXXXXXXXXXXX 120
             + H    FDLSLSN TQIN  QY N+          XXXXXXX               
Sbjct: 61  LHHLHPHSCFDLSLSNLTQINHHQYPNVSPSPTPNHXXXXXXXXXRYPVLESPAHLFETL 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPA--- 180
                                      PFPGQ N QDL FLRPIRGIPVYHQT NP+   
Sbjct: 121 NKTHNRPTAIFHHNTQPPSSSLDPTPTPFPGQINGQDLGFLRPIRGIPVYHQTNNPSVGT 180

Query: 181 GTPSPIAPSASGHGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERA 240
           G    + PSA+ HGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERA
Sbjct: 181 GNGGVVTPSAANHGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERA 240

Query: 241 TPKSVLELMDVKDLTLAHVKSHLQFYIKYNTMNMYNRAISTI----LYENASSGDTSNIE 300
           TPKSVLELMDVKDLTLAHVKSHLQ    Y T+   +RA ++     LYENASSGDTSNIE
Sbjct: 241 TPKSVLELMDVKDLTLAHVKSHLQM---YRTVKTTDRAAASSGQSDLYENASSGDTSNIE 300

Query: 301 DIIFDIQKPSMGRQNEHSVQQ-NRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSS 360
           DIIFDIQKP++GRQNE+S+QQ +RQNPHQDKDYHALWSNSSREAWLHG PNDSSRDLSSS
Sbjct: 301 DIIFDIQKPTIGRQNENSIQQTSRQNPHQDKDYHALWSNSSREAWLHGLPNDSSRDLSSS 360

Query: 361 LENDVDPKSSNNERLSEISSS--------GNLPQKPNLEFTLGRAV 371
           LEND+DPKSSNNERLSEISSS         N P KPNLEFTLGR +
Sbjct: 361 LENDIDPKSSNNERLSEISSSTDIICGVTNNNPLKPNLEFTLGRPI 397

[Close]

BLAST of Carg08858-RA vs. TrEMBL
Match: tr|A0A0A0LK04|A0A0A0LK04_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901010 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.2e-82
Identity = 172/210 (81.90%), Postives = 182/210 (86.67%), Query Frame = 0


Query: 174 MMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTL 233
           MMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTL
Sbjct: 1   MMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTL 60

Query: 234 AHVKSHLQFYIKYNTMNMYNRAISTI----LYENASSGDTSNIEDIIFDIQKPSMGRQNE 293
           AHVKSHLQ    Y T+   +RA ++     LYENASSGDTSNIEDIIFDIQKP++GRQNE
Sbjct: 61  AHVKSHLQM---YRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPTIGRQNE 120

Query: 294 HSVQQ-NRQNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSLENDVDPKSSNNERLS 353
           +S+QQ +RQNPHQDKDYHALWSNSSREAWLHG PNDSSRDLSSSLENDVDPKSSNNERLS
Sbjct: 121 NSIQQTSRQNPHQDKDYHALWSNSSREAWLHGLPNDSSRDLSSSLENDVDPKSSNNERLS 180

Query: 354 EISSS--------GNLPQKPNLEFTLGRAV 371
           EISSS         N P KPNLEFTLGR +
Sbjct: 181 EISSSTDIICGVTNNNPLKPNLEFTLGRPI 207

[Close]

BLAST of Carg08858-RA vs. TrEMBL
Match: tr|A0A061G740|A0A061G740_THECC (Homeodomain-like superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_016589 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79
Identity = 205/397 (51.64%), Postives = 234/397 (58.94%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTAPSQEHLDLGFWNNLNLESAKPTPKHHPTNQ 60
           MELFPAQPDLSLQISPPN +KPSSTWR T   +E +DLGFW    L+S         T+ 
Sbjct: 1   MELFPAQPDLSLQISPPN-SKPSSTWRRT---EEDMDLGFWKRA-LDSRNSVSSMAKTDN 60

Query: 61  HFDLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            F+LSLSN       SN                                           
Sbjct: 61  CFELSLSNPRVSESNSN----------HLHLLQNGGANCNGNLFHTYHQNQFPHRHNQLQ 120

Query: 121 XXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTP-------SPIAPSASG---- 180
                 H    Q   Q+L FLRPIRGIPVY     P   P       S +A S S     
Sbjct: 121 HPVLYQHQQQQQGLGQELGFLRPIRGIPVYQNHPPPTPFPFAQQPLDSSLASSPSSLVTN 180

Query: 181 ----------HGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATP 240
                       Q +MRSRF+SRFPAKRSMRAPRMRWT+TLHARFVHAVELLGGHERATP
Sbjct: 181 NTSNTSLSPFQSQGLMRSRFMSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATP 240

Query: 241 KSVLELMDVKDLTLAHVKSHLQFYIKYNTMNMYNRAISTI----LYENASSGDTSNIEDI 300
           KSVLELMDVKDLTLAHVKSHLQ    Y T+   +RA ++      +EN SSGDTS  ED+
Sbjct: 241 KSVLELMDVKDLTLAHVKSHLQM---YRTVKTTDRAAASSGQSDAFENGSSGDTS--EDL 300

Query: 301 IFDIQKPSMGRQNEHSVQQNR--QNPHQDKDYHALWSNSSREAWLHGFPNDSSRDLSSSL 360
           +FDIQ P   R++E SVQQ R   N HQDK+YH LWSNSSREAWLHG P DS+R+L  SL
Sbjct: 301 MFDIQNP---RRSEISVQQGRPSSNAHQDKEYHGLWSNSSREAWLHGKPKDSARNL-PSL 360

Query: 361 ENDVDPKSSNNERLSEISS---SGNLPQKPNLEFTLG 368
           E D+DPK  + ER+S++SS   SG  P+KPNLEFTLG
Sbjct: 361 EKDMDPKCLSYERISDVSSSSLSGTSPKKPNLEFTLG 373

[Close]

BLAST of Carg08858-RA vs. TrEMBL
Match: tr|A0A1R3JEZ4|A0A1R3JEZ4_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16948 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 7.8e-77
Identity = 254/409 (62.10%), Postives = 280/409 (68.46%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTAPSQEHLDLGFWNN-LNLESAKPTPKHHPTN 60
           MELFPAQPDLSLQISPPN +KPSSTWR T  ++E +DLGFW   L+  ++  +    P N
Sbjct: 1   MELFPAQPDLSLQISPPN-SKPSSTWRRTT-TEEDMDLGFWKRALDSRNSSMSSMAKPDN 60

Query: 61  Q-HFDLSLSN-----------FTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
              FDLSLSN                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  NCAFDLSLSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQTTNPAGTPSPIA--- 180
           XXXXXXXXXXXXXXXXXXX         Q+L FLRPIRGIPVY    NP  TP P A   
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXQELGFLRPIRGIPVYQNPPNP--TPFPFAQQP 180

Query: 181 ------PSASGHGQI----------MMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAV 240
                 PS+ G   I          +MRSRF+SRFPAKRSMRAPRMRWT+TLHARFVHAV
Sbjct: 181 LVDSSSPSSLGSNNINSSSPFQSQGLMRSRFMSRFPAKRSMRAPRMRWTTTLHARFVHAV 240

Query: 241 ELLGGHERATPKSVLELMDVKDLTLAHVKSHLQFYIKYNTMNMYNRAISTI----LYENA 300
           ELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ    Y T+   +RA +T      +EN 
Sbjct: 241 ELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM---YRTVKTTDRAAATSGQSDAFENG 300

Query: 301 SSGDTSNIEDIIFDIQKPSMGRQNEHSVQQNR--QNPHQDKDYHALWSNSSREAWLHGFP 360
           SSGDTS  ED++FDIQ P   R++E SVQQ R   N  QDKDYH LWSNSSREAWLHG P
Sbjct: 301 SSGDTS--EDLMFDIQNP---RRSEVSVQQGRSSSNALQDKDYHGLWSNSSREAWLHGKP 360

Query: 361 NDS-SRDLSSSLENDVDPKSSNNERLSEISS---SGNLPQKPNLEFTLG 368
            DS S     SLE D+DPK  + ER+SE+SS   SG  P+KPNLEFTLG
Sbjct: 361 KDSHSAGNLPSLEKDMDPKCLSYERISEVSSSSHSGTSPKKPNLEFTLG 397

[Close]

BLAST of Carg08858-RA vs. TrEMBL
Match: tr|A0A1Q3C6N0|A0A1Q3C6N0_CEPFO (Myb_DNA-binding domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_19237 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.1e-76
Identity = 214/401 (53.37%), Postives = 251/401 (62.59%), Query Frame = 0


Query: 1   MELFPAQPDLSLQISPPNTNKPSSTWRTTAPSQEHLDLGFWNNLNLESAKPTPKHHPTNQ 60
           MELFPAQPDLSLQISPPN +KPSSTWRT    Q+ +DLGFW    L+S    P     + 
Sbjct: 1   MELFPAQPDLSLQISPPN-SKPSSTWRT----QDEMDLGFWKRA-LDSRNTMPSMAKPDN 60

Query: 61  HFDLSLSNFTQINQYSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            ++LSLSN      ++N                               XXXXXXXXXXXX
Sbjct: 61  FYELSLSNPRVSESHTN------NNHFNYLLQNGTNYIGNSLFHSFQQXXXXXXXXXXXX 120

Query: 121 XXXXXXHPFPGQNNVQDLAFLRPIRGIPVYHQ------------------TTNPAGTPSP 180
           XXXXXX     Q    +L FLRPIRGIPVY                     T+ A +PS 
Sbjct: 121 XXXXXXXXXXXQGLSPELGFLRPIRGIPVYQNPXXXXXXHGPFPFVQQALDTSLATSPSS 180

Query: 181 IAPSASG-------HGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHE 240
           +A + SG         Q +MRSRF+SRFPAKRSMRAPRMRWT+TLHARFVHAVELLGGHE
Sbjct: 181 LASNNSGTTSLTHFQSQGLMRSRFMSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHE 240

Query: 241 RATPKSVLELMDVKDLTLAHVKSHLQFYIKYNTMNMYNRAISTI----LYENASSGDTSN 300
           RATPKSVLELMDVKDLTLAHVKSHLQ    Y T+   +RA ++     +++N SSGDTS 
Sbjct: 241 RATPKSVLELMDVKDLTLAHVKSHLQM---YRTVKTTDRAAASSGQSDVFDNGSSGDTS- 300

Query: 301 IEDIIFDIQKPSMGRQNEHSVQQNRQNPHQDKDYHALWSN-SSREAWLHGFPNDSSRDLS 360
            +D++FDI      R++E S+QQ R N HQDKD+H LWSN SSREAWLHG P  SS    
Sbjct: 301 -DDLMFDITNQ---RRSEISIQQGRPNAHQDKDFHGLWSNSSSREAWLHGKPKVSSSGNI 360

Query: 361 SSLENDVDPKSSNNERLSEISS---SGNLPQKPNLEFTLGR 369
            SLE +VDPK  + ER+S++SS   SG  P+KPNLEFTLGR
Sbjct: 361 PSLEKEVDPKCLSYERISDVSSSSLSGTSPKKPNLEFTLGR 381

The following BLAST results are available for this feature:

BLAST of Carg08858-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931215.1	1.0e-165	95.95	probable transcription factor KAN2 isoform X2 [Cucurbita moschata]	[more]
XP_022931214.1	8.8e-165	94.92	probable transcription factor KAN2 isoform X1 [Cucurbita moschata]	[more]
XP_022996129.1	2.2e-163	92.16	probable transcription factor KAN2 isoform X2 [Cucurbita maxima]	[more]
XP_022996128.1	1.8e-162	91.18	probable transcription factor KAN2 isoform X1 [Cucurbita maxima]	[more]
XP_022931216.1	2.4e-162	94.59	probable transcription factor KAN2 isoform X3 [Cucurbita moschata]	[more]

BLAST of Carg08858-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32240.1	1.3e-53	42.73	Homeodomain-like superfamily protein	[more]
AT5G16560.1	2.5e-36	47.37	Homeodomain-like superfamily protein	[more]
AT4G17695.1	8.6e-29	39.31	Homeodomain-like superfamily protein	[more]
AT5G42630.1	1.7e-24	91.38	Homeodomain-like superfamily protein	[more]
AT2G02060.1	8.3e-16	71.15	Homeodomain-like superfamily protein	[more]

BLAST of Carg08858-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C616\|KAN2_ARATH	2.4e-52	42.73	Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 ...	[more]
sp\|Q93WJ9\|KAN1_ARATH	4.5e-35	47.37	Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1	[more]
sp\|Q0J235\|ROLL9_ORYSJ	1.4e-28	89.86	Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL...	[more]
sp\|Q941I2\|KAN3_ARATH	1.5e-27	39.31	Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 ...	[more]
sp\|Q9FJV5\|KAN4_ARATH	3.0e-23	91.38	Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 ...	[more]

BLAST of Carg08858-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E5K0\|A0A1S4E5K0_CUCME	2.8e-119	65.02	probable transcription factor KAN2 OS=Cucumis melo OX=3656 GN=LOC103503571 PE=4 ...	[more]
tr\|A0A0A0LK04\|A0A0A0LK04_CUCSA	1.2e-82	81.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901010 PE=4 SV=1	[more]
tr\|A0A061G740\|A0A061G740_THECC	1.3e-79	51.64	Homeodomain-like superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM...	[more]
tr\|A0A1R3JEZ4\|A0A1R3JEZ4_9ROSI	7.8e-77	62.10	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16948 PE=4 SV=1	[more]
tr\|A0A1Q3C6N0\|A0A1Q3C6N0_CEPFO	5.1e-76	53.37	Myb_DNA-binding domain-containing protein OS=Cephalotus follicularis OX=3775 GN=...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR006447	Myb_dom_plants
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg08858	Carg08858	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg08858-RA	Carg08858-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08858-RA.exon.1	Carg08858-RA.exon.1	exon
Carg08858-RA.exon.2	Carg08858-RA.exon.2	exon
Carg08858-RA.exon.3	Carg08858-RA.exon.3	exon
Carg08858-RA.exon.4	Carg08858-RA.exon.4	exon
Carg08858-RA.exon.5	Carg08858-RA.exon.5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08858-RA.CDS.1	Carg08858-RA.CDS.1	CDS
Carg08858-RA.CDS.2	Carg08858-RA.CDS.2	CDS
Carg08858-RA.CDS.3	Carg08858-RA.CDS.3	CDS
Carg08858-RA.CDS.4	Carg08858-RA.CDS.4	CDS
Carg08858-RA.CDS.5	Carg08858-RA.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08858-RA.three_prime_UTR.1	Carg08858-RA.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 193..243 e-value: 5.3E-6 score: 26.4
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 192..243 e-value: 8.6E-22 score: 75.2
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 188..249 e-value: 1.5E-22 score: 81.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 344..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..370
None	No IPR available	PANTHER	PTHR31496:SF10	TRANSCRIPTION FACTOR KAN2-RELATED	coord: 6..368
None	No IPR available	PANTHER	PTHR31496	FAMILY NOT NAMED	coord: 6..368
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 189..245