Carg08586-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAATGAGAGAAAATGGAGACGGTGGAGGCTTTTCATTGTAACGGGAGTGGCGGTCGCTGGTTTTCTGTTTTCTAGCAGCAGTGCTTCACAACTTGATCAACAGAAGGAGCCTCAGCCTGTGGTATCCAGGATTGCTTTTGGATCATGCGCTAACCAGGATACTCCTCAGGTTTCTTTGTCGTCGACGTCGTCGTTGCTGTTTTTCTTAATTAACTCTATCTACTGATCTAATCTGATTCTTACAATTTTGTATTGCGACGTCAAAGATGTGAAAAGACGACAATGTTGTTATTATAGGAGTAACACTGTACATCGAGTTGTTTTTTGCAGCCAATCTGGAACTCCATAGTCAACTTCGATCCGCAAGTTTTCATTTGGCTTGGTGATAACATCTATGGTGACATTAGGCGTCCTTTCAAACTACTTGGTCGAGAAAGGACGGTGGGGCCATGGAAAAATGTTCCACGATTCGTTCCTTCATCTAAGCAGGAAATGATGCTCAAATACAAGAGGGGCAAGACAATTCCAGGTTATTCTAGGCTTAGACAGAGGACCAAGGTGCCTGATCCGTGAATTCATTAAAAAGTCTCGTACATTATTTGATTTTAACATGATTAAATTTTTGACGGTTAAATGAGGGTGCCTTTGTTTTTTAGTTAGTCTTTGTGCTGTTTTAGGTAATCGGTACCTGGGATGACCATGATTATGGATTAAATGATGCCGGAAAGGAATTTACTGAGAAGGCCACTAATCAGAAGCTTCTCCTTGATTTTTTAGATGAACCCCTTGATAGTCCAAGGTGGGAGTTCCTTTTCTGCTTCTACATATTATTTATCTGTCCTAAGGGTTGCTTTTCTTCGGTTTGTCTTATTATCTGCTCTCCATATTAGTCTCTTACTTCCATGAACTGATATTAGAAAGTTGGCGTTGATATTTAAAATTTTTGTTATCTTTATGCATACCATTACTCTGTATGGAAGTATCCTGTACTACTTCCACTAATGTTGGGTGATTGGATGTGCAAGAATGAACCAGAACACTCTTGGTTCTTTTTTCCTTATACACTTTTCTTTTTTTTTCTATCTAAAATCATTTAGGAAATTCTATAGAAGTCTTAGATTGTTTTTTGTTGAACTTTACTTGTGAGTCCATTTGCCTCGCTGAGTCTCCTATTATCATTTCACCAACTTTTGGCGCTGGGCAGGTTTAAGTTTCTTAAATATTTAGTGTTTATTCAGGTGTGATTCAGAAAGCAATACCTATTTGGTAGATCATTTCAATCCCTATTGCTTGTGGAAGAGCTAAATTTCTGTTAAAGAGAGACTTCCATTCTCTTGCGTACAATCTAGGAACTTACAAACCAAGAACTCAAGAAATGCTTCCAAGAGCTCTTACCTTGTGAATATCCTTACTTGAACATAACCCTTCTCTCCCAAGAACTTGTATCTATCTTGTTAATTCCCTCGGTTACTGCATCCTCAACAAGTGTTTCATAGGTTGACTTTCGACCTTTGCTACCCGAAGTATCTCAAGTATGCCATGGGCATGCTGCTGAAATTCACGTTGTGCAAATATGCGTATATTGTAGTTTTTCTCCTATCAACGGGCATGTTAGGAAAGGACATGCGTTAAAGACGGTGTCGTTTGTGTTTAGGTTTAGACATTGTTCAAAGACTTGAAGGGTATGTTGCAATGATACTGCAAAACAAAGCAAATCGCAATCTATGTCATACAGGAATATGATGCATCTAAACTCATATTAGAAGGGAACCTTGTTTCTCACATTCCATGAACTGCAATCGGAGGGTTTACTTTTCTTTTAAGTTCATTTTTTAAATGCTAGAAAAGATATTTTCTGACCCTTATGGTAGTTTTTGTCCACCTGAGGACGTTATTTGTGAGTTTGCTAAGCAACATTACCTATGACACTTCAAATTGATAGTTTATTAGAAAAATAAACATCCTAATACTGCAGTGGTTAGCTTAAAATTCTCGCCATCTTTTGTCATTTTTAACATAAAAATTATGAAAGGAATGGTATACCCAAGTATATTAGATTGAAAAAAGATTTGTACTTTATTTCTGGGTAAGGCCTACACCTTAGTGTTCATTGCGATAATTTAAATTTTAGAGCACTGTAATCCTTGGATTGTTAATTTACTTCTTTGTAGATTTTTTTCTGTTAAATTATTAACCATACTTTGCCTTTCTAGGCGCAAGCAGCATGGTGTGTATGCATCATACATGTTCGGCCCTATAGGTAAACAAATTAAGGTACGAATTGTAGCTCTTTCGATGATTCTTATCTTCATAATTTGGCTTTAA ATGGGCAATGAGAGAAAATGGAGACGGTGGAGGCTTTTCATTGTAACGGGAGTGGCGGTCGCTGGTTTTCTGTTTTCTAGCAGCAGTGCTTCACAACTTGATCAACAGAAGGAGCCTCAGCCTGTGGTATCCAGGATTGCTTTTGGATCATGCGCTAACCAGGATACTCCTCAGCCAATCTGGAACTCCATAGTCAACTTCGATCCGCAAGTTTTCATTTGGCTTGGTGATAACATCTATGGTGACATTAGGCGTCCTTTCAAACTACTTGGTCGAGAAAGGACGGTGGGGCCATGGAAAAATGTTCCACGATTCGTTCCTTCATCTAAGCAGGAAATGATGCTCAAATACAAGAGGGGCAAGACAATTCCAGGTTATTCTAGGCTTAGACAGAGGACCAAGGTAATCGGTACCTGGGATGACCATGATTATGGATTAAATGATGCCGGAAAGGAATTTACTGAGAAGGCCACTAATCAGAAGCTTCTCCTTGATTTTTTAGATGAACCCCTTGATAGTCCAAGGCGCAAGCAGCATGGTGTGTATGCATCATACATGTTCGGCCCTATAGGTAAACAAATTAAGGTACGAATTGTAGCTCTTTCGATGATTCTTATCTTCATAATTTGGCTTTAA ATGGGCAATGAGAGAAAATGGAGACGGTGGAGGCTTTTCATTGTAACGGGAGTGGCGGTCGCTGGTTTTCTGTTTTCTAGCAGCAGTGCTTCACAACTTGATCAACAGAAGGAGCCTCAGCCTGTGGTATCCAGGATTGCTTTTGGATCATGCGCTAACCAGGATACTCCTCAGCCAATCTGGAACTCCATAGTCAACTTCGATCCGCAAGTTTTCATTTGGCTTGGTGATAACATCTATGGTGACATTAGGCGTCCTTTCAAACTACTTGGTCGAGAAAGGACGGTGGGGCCATGGAAAAATGTTCCACGATTCGTTCCTTCATCTAAGCAGGAAATGATGCTCAAATACAAGAGGGGCAAGACAATTCCAGGTTATTCTAGGCTTAGACAGAGGACCAAGGTAATCGGTACCTGGGATGACCATGATTATGGATTAAATGATGCCGGAAAGGAATTTACTGAGAAGGCCACTAATCAGAAGCTTCTCCTTGATTTTTTAGATGAACCCCTTGATAGTCCAAGGCGCAAGCAGCATGGTGTGTATGCATCATACATGTTCGGCCCTATAGGTAAACAAATTAAGGTACGAATTGTAGCTCTTTCGATGATTCTTATCTTCATAATTTGGCTTTAA MGNERKWRRWRLFIVTGVAVAGFLFSSSSASQLDQQKEPQPVVSRIAFGSCANQDTPQPIWNSIVNFDPQVFIWLGDNIYGDIRRPFKLLGRERTVGPWKNVPRFVPSSKQEMMLKYKRGKTIPGYSRLRQRTKVIGTWDDHDYGLNDAGKEFTEKATNQKLLLDFLDEPLDSPRRKQHGVYASYMFGPIGKQIKVRIVALSMILIFIIWL
BLAST of Carg08586-RA vs. NCBI nr
Match: XP_022975620.1 (uncharacterized protein LOC111475314 [Cucurbita maxima]) HSP 1 Score: 415.2 bits (1066), Expect = 1.3e-112 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
BLAST of Carg08586-RA vs. NCBI nr
Match: XP_022937304.1 (uncharacterized protein LOC111443630 [Cucurbita moschata]) HSP 1 Score: 413.7 bits (1062), Expect = 3.8e-112 Identity = 195/196 (99.49%), Postives = 196/196 (100.00%), Query Frame = 0
BLAST of Carg08586-RA vs. NCBI nr
Match: XP_023521111.1 (uncharacterized protein LOC111784737 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 409.5 bits (1051), Expect = 7.1e-111 Identity = 193/196 (98.47%), Postives = 195/196 (99.49%), Query Frame = 0
BLAST of Carg08586-RA vs. NCBI nr
Match: XP_011654300.1 (PREDICTED: uncharacterized protein LOC101210375 isoform X2 [Cucumis sativus]) HSP 1 Score: 376.3 bits (965), Expect = 6.7e-101 Identity = 174/196 (88.78%), Postives = 181/196 (92.35%), Query Frame = 0
BLAST of Carg08586-RA vs. NCBI nr
Match: XP_011654299.1 (PREDICTED: uncharacterized protein LOC101210375 isoform X1 [Cucumis sativus]) HSP 1 Score: 376.3 bits (965), Expect = 6.7e-101 Identity = 174/196 (88.78%), Postives = 181/196 (92.35%), Query Frame = 0
BLAST of Carg08586-RA vs. TAIR10
Match: AT5G42370.2 (Calcineurin-like metallo-phosphoesterase superfamily protein) HSP 1 Score: 252.3 bits (643), Expect = 2.6e-67 Identity = 109/157 (69.43%), Postives = 134/157 (85.35%), Query Frame = 0
BLAST of Carg08586-RA vs. TrEMBL
Match: tr|A0A1S3BW26|A0A1S3BW26_CUCME (uncharacterized protein LOC103493872 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493872 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 3.8e-100 Identity = 174/196 (88.78%), Postives = 178/196 (90.82%), Query Frame = 0
BLAST of Carg08586-RA vs. TrEMBL
Match: tr|A0A1S3BWF4|A0A1S3BWF4_CUCME (uncharacterized protein LOC103493872 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493872 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 3.8e-100 Identity = 174/196 (88.78%), Postives = 178/196 (90.82%), Query Frame = 0
BLAST of Carg08586-RA vs. TrEMBL
Match: tr|A0A1S3BUQ4|A0A1S3BUQ4_CUCME (uncharacterized protein LOC103493872 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103493872 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 8.4e-100 Identity = 173/195 (88.72%), Postives = 177/195 (90.77%), Query Frame = 0
BLAST of Carg08586-RA vs. TrEMBL
Match: tr|A0A0A0L1G6|A0A0A0L1G6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G665670 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 4.3e-88 Identity = 154/175 (88.00%), Postives = 160/175 (91.43%), Query Frame = 0
BLAST of Carg08586-RA vs. TrEMBL
Match: tr|A0A251IP37|A0A251IP37_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G000500 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 2.1e-74 Identity = 131/196 (66.84%), Postives = 153/196 (78.06%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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