Carg08491-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08491-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Unknown protein
Location	Cucurbita_argyrosperma_scaffold_022 : 613902 .. 615441 (-)
Sequence length	1359

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTATCAGACAAGATGGAAGCTGATAAACTATATCTTGATCTCCTAGCACTGAGGCAACTGTACTTCTTTCTCTTAAAATGCTGTTTGCGGGATGCAAATTCAGAACTTGTAAGCCTCTGTGAGATAAGACTGTCTGGGTGTGTGCGCTTTCTACTTGAATATTTAACTATTGTAGCTTGGTTTTATTGTCAAAGCAGGTGGTGGGTGGAAGGGCAAAGATCTTATTGAAGCATTTGCTCGATGATGCCACTACTGGACTTCTCGAGTTCCACTCGAAGGTTTGTATTCCATTCTGCATAAAAACTTCTGTAAAACAAAACAACAATTCATAGATGTCTAGTGACATACATCCGTATTTGAGTTTGTACAGACTCCGCCATTGTACAACTTTCAACGCAAAGATGATAAACAGACAACGCCACTGGACGAGAAAGTTGCTGAATGGATGGAACATAATCAAACTGCAAGAAGGATGGAAAATCCAGAGAAGATTGAACACAAACCTCGAAGGGACGGAGCTTCAGCGTCAAATGTTGCCGCTAATGACTTATCAAGTGGCATCAGTTCAGCGCTCAGAAGAATTGAACTCCACATTTTATCCCTGCAACGTTATACAAGAAGCAATGTCAGTGAAACTAAATTAGCTTACTATGGGCAGTCTGTTCATCAGGGGAATGAGTCATTAAACCACCAAAAAGTTAAGCCGATGGTGGCAAACCATTGTTCCAAGTTCGTGCATGGATTCAGAATACCTCTGACTCAAGACAAGAACGAGGCCATGAAACAGCACGAACTTGCGCTTCCACCGACTCTGATGGATAAATCAGGATGTCCAGAAGGATCCAAGGCAACTGCCAGGCGCGCTATGAAACTGAATCGAACTTGGATACAAGAAAAGAGGAGCAAGAATTCACGTGGTCGTATTGTAATGAGACCAACTTTGTGGCATAACGAGACCCATCTGGCTGCCCAGCAAGAATCAGAATACACAAACTCAGAATCAGAATCAGCACCTTCTTCAAGTCCGGCAACTCGACAAACCAGTGAAAGTGAAACCACCGCTGATTCTTCTTCTCCAGGTGACCAATCCAGTCCACCGGCAACTGGTTCAGAGGCAAGTAGCCAGTACGGAAACAGCAGTAGCAACATTTCAAGAGAAGCATTCAAGTTCAGCCATGGGAAGAAAGAGTCCAAGAAAGCCGTAGGACGGTTCAAGAGTTTAAGAAACAAATTGGGCCTTATCTTCCACCACCACCACCACCATTACCATAACGGTCACAACTCCATGTGGAAGCAAGTAAGAAGGATGTTCCACCGTACAGGTAAGAAAGAACAAACAAGTAAAGAAGAAAAAAATGGGTTGCTAAGGAAAACAACAATCAGAAGTGTGTCTCGGAATAACCAAGTTGGGAAGTTTCAAGCACTTGCTGAAGGGCTTCGAAGCCATGTATGGAAATCGAAAGCCATGAAGAAGAAAGAGCAAAGAGGGCTAAACTGTGGGAAGAAGCTGCATTGGTGGAGTGCAGTTGCCCAATAA

mRNA sequence

AATTTATCAGACAAGATGGAAGCTGATAAACTATATCTTGATCTCCTAGCACTGAGGCAACTGTACTTCTTTCTCTTAAAATGCTGTTTGCGGGATGCAAATTCAGAACTTGTGGTGGGTGGAAGGGCAAAGATCTTATTGAAGCATTTGCTCGATGATGCCACTACTGGACTTCTCGAGTTCCACTCGAAGACTCCGCCATTGTACAACTTTCAACGCAAAGATGATAAACAGACAACGCCACTGGACGAGAAAGTTGCTGAATGGATGGAACATAATCAAACTGCAAGAAGGATGGAAAATCCAGAGAAGATTGAACACAAACCTCGAAGGGACGGAGCTTCAGCGTCAAATGTTGCCGCTAATGACTTATCAAGTGGCATCAGTTCAGCGCTCAGAAGAATTGAACTCCACATTTTATCCCTGCAACGTTATACAAGAAGCAATGTCAGTGAAACTAAATTAGCTTACTATGGGCAGTCTGTTCATCAGGGGAATGAGTCATTAAACCACCAAAAAGTTAAGCCGATGGTGGCAAACCATTGTTCCAAGTTCGTGCATGGATTCAGAATACCTCTGACTCAAGACAAGAACGAGGCCATGAAACAGCACGAACTTGCGCTTCCACCGACTCTGATGGATAAATCAGGATGTCCAGAAGGATCCAAGGCAACTGCCAGGCGCGCTATGAAACTGAATCGAACTTGGATACAAGAAAAGAGGAGCAAGAATTCACGTGGTCGTATTGTAATGAGACCAACTTTGTGGCATAACGAGACCCATCTGGCTGCCCAGCAAGAATCAGAATACACAAACTCAGAATCAGAATCAGCACCTTCTTCAAGTCCGGCAACTCGACAAACCAGTGAAAGTGAAACCACCGCTGATTCTTCTTCTCCAGGTGACCAATCCAGTCCACCGGCAACTGGTTCAGAGGCAAGTAGCCAGTACGGAAACAGCAGTAGCAACATTTCAAGAGAAGCATTCAAGTTCAGCCATGGGAAGAAAGAGTCCAAGAAAGCCGTAGGACGGTTCAAGAGTTTAAGAAACAAATTGGGCCTTATCTTCCACCACCACCACCACCATTACCATAACGGTCACAACTCCATGTGGAAGCAAGTAAGAAGGATGTTCCACCGTACAGGTAAGAAAGAACAAACAAGTAAAGAAGAAAAAAATGGGTTGCTAAGGAAAACAACAATCAGAAGTGTGTCTCGGAATAACCAAGTTGGGAAGTTTCAAGCACTTGCTGAAGGGCTTCGAAGCCATGTATGGAAATCGAAAGCCATGAAGAAGAAAGAGCAAAGAGGGCTAAACTGTGGGAAGAAGCTGCATTGGTGGAGTGCAGTTGCCCAATAA

Coding sequence (CDS)

AATTTATCAGACAAGATGGAAGCTGATAAACTATATCTTGATCTCCTAGCACTGAGGCAACTGTACTTCTTTCTCTTAAAATGCTGTTTGCGGGATGCAAATTCAGAACTTGTGGTGGGTGGAAGGGCAAAGATCTTATTGAAGCATTTGCTCGATGATGCCACTACTGGACTTCTCGAGTTCCACTCGAAGACTCCGCCATTGTACAACTTTCAACGCAAAGATGATAAACAGACAACGCCACTGGACGAGAAAGTTGCTGAATGGATGGAACATAATCAAACTGCAAGAAGGATGGAAAATCCAGAGAAGATTGAACACAAACCTCGAAGGGACGGAGCTTCAGCGTCAAATGTTGCCGCTAATGACTTATCAAGTGGCATCAGTTCAGCGCTCAGAAGAATTGAACTCCACATTTTATCCCTGCAACGTTATACAAGAAGCAATGTCAGTGAAACTAAATTAGCTTACTATGGGCAGTCTGTTCATCAGGGGAATGAGTCATTAAACCACCAAAAAGTTAAGCCGATGGTGGCAAACCATTGTTCCAAGTTCGTGCATGGATTCAGAATACCTCTGACTCAAGACAAGAACGAGGCCATGAAACAGCACGAACTTGCGCTTCCACCGACTCTGATGGATAAATCAGGATGTCCAGAAGGATCCAAGGCAACTGCCAGGCGCGCTATGAAACTGAATCGAACTTGGATACAAGAAAAGAGGAGCAAGAATTCACGTGGTCGTATTGTAATGAGACCAACTTTGTGGCATAACGAGACCCATCTGGCTGCCCAGCAAGAATCAGAATACACAAACTCAGAATCAGAATCAGCACCTTCTTCAAGTCCGGCAACTCGACAAACCAGTGAAAGTGAAACCACCGCTGATTCTTCTTCTCCAGGTGACCAATCCAGTCCACCGGCAACTGGTTCAGAGGCAAGTAGCCAGTACGGAAACAGCAGTAGCAACATTTCAAGAGAAGCATTCAAGTTCAGCCATGGGAAGAAAGAGTCCAAGAAAGCCGTAGGACGGTTCAAGAGTTTAAGAAACAAATTGGGCCTTATCTTCCACCACCACCACCACCATTACCATAACGGTCACAACTCCATGTGGAAGCAAGTAAGAAGGATGTTCCACCGTACAGGTAAGAAAGAACAAACAAGTAAAGAAGAAAAAAATGGGTTGCTAAGGAAAACAACAATCAGAAGTGTGTCTCGGAATAACCAAGTTGGGAAGTTTCAAGCACTTGCTGAAGGGCTTCGAAGCCATGTATGGAAATCGAAAGCCATGAAGAAGAAAGAGCAAAGAGGGCTAAACTGTGGGAAGAAGCTGCATTGGTGGAGTGCAGTTGCCCAATAA

Protein sequence

NLSDKMEADKLYLDLLALRQLYFFLLKCCLRDANSELVVGGRAKILLKHLLDDATTGLLEFHSKTPPLYNFQRKDDKQTTPLDEKVAEWMEHNQTARRMENPEKIEHKPRRDGASASNVAANDLSSGISSALRRIELHILSLQRYTRSNVSETKLAYYGQSVHQGNESLNHQKVKPMVANHCSKFVHGFRIPLTQDKNEAMKQHELALPPTLMDKSGCPEGSKATARRAMKLNRTWIQEKRSKNSRGRIVMRPTLWHNETHLAAQQESEYTNSESESAPSSSPATRQTSESETTADSSSPGDQSSPPATGSEASSQYGNSSSNISREAFKFSHGKKESKKAVGRFKSLRNKLGLIFHHHHHHYHNGHNSMWKQVRRMFHRTGKKEQTSKEEKNGLLRKTTIRSVSRNNQVGKFQALAEGLRSHVWKSKAMKKKEQRGLNCGKKLHWWSAVAQ

Homology

[Close]

BLAST of Carg08491-RA vs. NCBI nr
Match: XP_022958321.1 (uncharacterized protein LOC111459571 isoform X1 [Cucurbita moschata])

HSP 1 Score: 697.2 bits (1798), Expect = 3.7e-197
Identity = 420/455 (92.31%), Postives = 426/455 (93.63%), Query Frame = 0


Query: 1   NLSDKMEADKLYLDLLALRQLYFFLLKCCLRDANSELVVGGRAKILLKHLLDDATTGLLE 60
           NLSDKMEAD+LYLDLLALRQLY FLLKCCLRDANSELVVG RAKIL KHLLDDATTGLLE
Sbjct: 21  NLSDKMEADELYLDLLALRQLYVFLLKCCLRDANSELVVGARAKILFKHLLDDATTGLLE 80

Query: 61  FHSKTPPLYNFQRKDDKQTTPLDEKVAEWMEHNQTARRMENPEKIEHKPRRDGASASNVA 120
           FHSKT P YNF RKDDKQT PLDEKVAEWMEHNQTAR M NPEKIEHKP RD ASASNVA
Sbjct: 81  FHSKTLPFYNFLRKDDKQTKPLDEKVAEWMEHNQTARTMANPEKIEHKPGRDRASASNVA 140

Query: 121 ANDLSSGISSALRRIELHILSLQRYTRSNVSETKLAYYGQSVHQGNESLNHQKVKPMVAN 180
           ANDLSSGISSALRRIELHILSLQRYTRS++SETKLAYYGQSVHQGNESLNHQKVKPMVAN
Sbjct: 141 ANDLSSGISSALRRIELHILSLQRYTRSHISETKLAYYGQSVHQGNESLNHQKVKPMVAN 200

Query: 181 HCSKFVHGFRIPLTQDKNEAMKQHELALPPTLMDKSGCPEGSKATARRAMKLNRTWIQEK 240
           HCSKFVHGFRIPLTQDKNEAMKQHELALPPTLMDKSGCPEGSKATARRAMKLNRTWIQEK
Sbjct: 201 HCSKFVHGFRIPLTQDKNEAMKQHELALPPTLMDKSGCPEGSKATARRAMKLNRTWIQEK 260

Query: 241 RSKNSRGRIVMRPTLWHNETHLAAQQESEYTNSESESAPSSSPXXXXXXXXXXXXXXXXX 300
           RSKNSRGRIVMRPTLWHN+THLAAQQESEYTNSESESAPSSSPXXXXXXXXXXXXXXXXX
Sbjct: 261 RSKNSRGRIVMRPTLWHNKTHLAAQQESEYTNSESESAPSSSPXXXXXXXXXXXXXXXXX 320

Query: 301 XXXXXXXXXXXXXXXXXXXXXXNISREAFKFSHGKKESKKAVGRFKSLRNKLGLIXXXXX 360
           XXXXXXXXXXXXXXXXXXXXX NISREAFKFSHGKKESKKAVGRFKSLRNKLGLI XXXX
Sbjct: 321 XXXXXXXXXXXXXXXXXXXXXSNISREAFKFSHGKKESKKAVGRFKSLRNKLGLIFXXXX 380

Query: 361 XXXXXXXXXXXXXXXXXFHRTGKKEQTSKEEKNGLLRKTTIRSVSRNNQVGKFQALAEGL 420
           XXXXXXXXX        FHRTGKKE TSKEEKNG+LRKTTIRSVSRNNQVGKFQALAEGL
Sbjct: 381 XXXXXXXXXMWKQVRRMFHRTGKKELTSKEEKNGMLRKTTIRSVSRNNQVGKFQALAEGL 440

Query: 421 RSHVWKSKAMKKKEQRGLNC-----GKKLHWWSAV 451
           RSHVWKSKAMKKKEQRGLNC     GKKLHWW  +
Sbjct: 441 RSHVWKSKAMKKKEQRGLNCGKTNGGKKLHWWKMI 475

[Close]

BLAST of Carg08491-RA vs. NCBI nr
Match: XP_022958322.1 (uncharacterized protein LOC111459571 isoform X2 [Cucurbita moschata] >XP_022958323.1 uncharacterized protein LOC111459571 isoform X2 [Cucurbita moschata])

HSP 1 Score: 687.2 bits (1772), Expect = 3.8e-194
Identity = 415/450 (92.22%), Postives = 421/450 (93.56%), Query Frame = 0


Query: 6   MEADKLYLDLLALRQLYFFLLKCCLRDANSELVVGGRAKILLKHLLDDATTGLLEFHSKT 65
           MEAD+LYLDLLALRQLY FLLKCCLRDANSELVVG RAKIL KHLLDDATTGLLEFHSKT
Sbjct: 1   MEADELYLDLLALRQLYVFLLKCCLRDANSELVVGARAKILFKHLLDDATTGLLEFHSKT 60

Query: 66  PPLYNFQRKDDKQTTPLDEKVAEWMEHNQTARRMENPEKIEHKPRRDGASASNVAANDLS 125
            P YNF RKDDKQT PLDEKVAEWMEHNQTAR M NPEKIEHKP RD ASASNVAANDLS
Sbjct: 61  LPFYNFLRKDDKQTKPLDEKVAEWMEHNQTARTMANPEKIEHKPGRDRASASNVAANDLS 120

Query: 126 SGISSALRRIELHILSLQRYTRSNVSETKLAYYGQSVHQGNESLNHQKVKPMVANHCSKF 185
           SGISSALRRIELHILSLQRYTRS++SETKLAYYGQSVHQGNESLNHQKVKPMVANHCSKF
Sbjct: 121 SGISSALRRIELHILSLQRYTRSHISETKLAYYGQSVHQGNESLNHQKVKPMVANHCSKF 180

Query: 186 VHGFRIPLTQDKNEAMKQHELALPPTLMDKSGCPEGSKATARRAMKLNRTWIQEKRSKNS 245
           VHGFRIPLTQDKNEAMKQHELALPPTLMDKSGCPEGSKATARRAMKLNRTWIQEKRSKNS
Sbjct: 181 VHGFRIPLTQDKNEAMKQHELALPPTLMDKSGCPEGSKATARRAMKLNRTWIQEKRSKNS 240

Query: 246 RGRIVMRPTLWHNETHLAAQQESEYTNSESESAPSSSPXXXXXXXXXXXXXXXXXXXXXX 305
           RGRIVMRPTLWHN+THLAAQQESEYTNSESESAPSSSPXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 RGRIVMRPTLWHNKTHLAAQQESEYTNSESESAPSSSPXXXXXXXXXXXXXXXXXXXXXX 300

Query: 306 XXXXXXXXXXXXXXXXXNISREAFKFSHGKKESKKAVGRFKSLRNKLGLIXXXXXXXXXX 365
           XXXXXXXXXXXXXXXX NISREAFKFSHGKKESKKAVGRFKSLRNKLGLI XXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXSNISREAFKFSHGKKESKKAVGRFKSLRNKLGLIFXXXXXXXXX 360

Query: 366 XXXXXXXXXXXXFHRTGKKEQTSKEEKNGLLRKTTIRSVSRNNQVGKFQALAEGLRSHVW 425
           XXXX        FHRTGKKE TSKEEKNG+LRKTTIRSVSRNNQVGKFQALAEGLRSHVW
Sbjct: 361 XXXXMWKQVRRMFHRTGKKELTSKEEKNGMLRKTTIRSVSRNNQVGKFQALAEGLRSHVW 420

Query: 426 KSKAMKKKEQRGLNC-----GKKLHWWSAV 451
           KSKAMKKKEQRGLNC     GKKLHWW  +
Sbjct: 421 KSKAMKKKEQRGLNCGKTNGGKKLHWWKMI 450

[Close]

BLAST of Carg08491-RA vs. NCBI nr
Match: XP_023533016.1 (uncharacterized protein LOC111795024 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 603.6 bits (1555), Expect = 5.5e-169
Identity = 381/460 (82.83%), Postives = 399/460 (86.74%), Query Frame = 0


Query: 6   MEADKLYLDLLALRQLYFFLLKCCLRDANSELVVGGRAKILLKHLLDDATTGLLEFHSKT 65
           MEAD+LYLDLLALRQLYFFLLKCCLRDANSELVVG RAKILLKHLLDDATTGLLEFHSKT
Sbjct: 1   MEADELYLDLLALRQLYFFLLKCCLRDANSELVVGARAKILLKHLLDDATTGLLEFHSKT 60

Query: 66  PPLYNFQRKDDKQTTPLDEKVAEWMEHNQTARRMENPEKIEHKPRRDGASASNVAANDLS 125
            P YNF  KDDKQT PLDEKVAEWMEH+QTARRM+NPEKIEHKP RD AS SNVAANDLS
Sbjct: 61  LPFYNFLCKDDKQTKPLDEKVAEWMEHDQTARRMQNPEKIEHKPGRDRASPSNVAANDLS 120

Query: 126 SGISSALRRIELHILSLQRYTRSNVSETKLAYYGQSVHQGNESLNHQKVKPMVANHCSKF 185
           SGISSALRRIELHILSLQRYTRS++SETKLAYYGQSVH+GN+S N QKVKPMVAN+CSKF
Sbjct: 121 SGISSALRRIELHILSLQRYTRSHISETKLAYYGQSVHKGNKSFNQQKVKPMVANNCSKF 180

Query: 186 VHGFRIPLTQDKNEAMKQHELALPPTLMDKSGCPEGSKATARRAMKLNRTWIQEKRSKNS 245
           VHGFR+PLTQ K+EAMKQ EL +PPT MDKSGC EGSKATARRAMKLNRTWIQEKRSKNS
Sbjct: 181 VHGFRMPLTQVKDEAMKQQELVIPPTPMDKSGCSEGSKATARRAMKLNRTWIQEKRSKNS 240

Query: 246 RGRIVMRPTLWHN------------ETHLAAQQESEYTNSESESAPSSSPXXXXXXXXXX 305
           RGRIVM+PTLWH+             THLAAQQESE TNSES S   SSPXXXXXXXXXX
Sbjct: 241 RGRIVMKPTLWHHPSREVRKEQTHYRTHLAAQQESELTNSESASC--SSPXXXXXXXXXX 300

Query: 306 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISREAFKFSHGKKESKKAVGRFKSLRNKLG 365
           XXXXXXXXXXXXXXXXXXXXXXXXXXX  NISR+AFKFSHGKKESK+A GR KSLRNKLG
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXSSNISRKAFKFSHGKKESKRAEGRLKSLRNKLG 360

Query: 366 LI---XXXXXXXXXXXXXXXXXXXXXXFHRTGKKEQTSKEEKNGLLRKTTIRSVSRNNQV 425
           LI   XXXXXXXXXXXXX         FHRT KKE TSKEE N  LRKTTIRS  R NQV
Sbjct: 361 LIXXXXXXXXXXXXXXXXSMWKQVRTMFHRTDKKELTSKEESNEKLRKTTIRSEPRKNQV 420

Query: 426 GKFQALAEGLRSHVWKSKAMKKKEQRGLNCGKKLHWWSAV 451
            +FQALA+GLRSHVWKSKAMKKKEQRGLNCGKKLHWW  +
Sbjct: 421 RRFQALAKGLRSHVWKSKAMKKKEQRGLNCGKKLHWWKMI 458

[Close]

BLAST of Carg08491-RA vs. NCBI nr
Match: XP_022996025.1 (uncharacterized protein LOC111491355 isoform X1 [Cucurbita maxima] >XP_022996026.1 uncharacterized protein LOC111491355 isoform X1 [Cucurbita maxima])

HSP 1 Score: 603.2 bits (1554), Expect = 7.2e-169
Identity = 387/469 (82.52%), Postives = 397/469 (84.65%), Query Frame = 0


Query: 1   NLSDKMEADKLYLDLLALRQLYFFLLKCCLRDANSELVVGGRAKILLKHLLDDATTGLLE 60
           NLSDKMEAD+LYLDLLALRQLYFFLLKCCLRDANSELVVG RAKILLKHLLDDATTGLLE
Sbjct: 40  NLSDKMEADELYLDLLALRQLYFFLLKCCLRDANSELVVGARAKILLKHLLDDATTGLLE 99

Query: 61  FHSKTPPLYNFQRKDDKQTTPLDEKVAEWMEHNQTARRMENPEKIEHKPRRDGASASNVA 120
           FHSKT   YNF RKDDKQT PLDEKVAEWMEHNQTARRM NPEKIEHKPRRD ASASNVA
Sbjct: 100 FHSKTLAFYNFLRKDDKQTKPLDEKVAEWMEHNQTARRMANPEKIEHKPRRDRASASNVA 159

Query: 121 ANDLSSGISSALRRIELHILSLQRYTRSNVSETKLAYYGQSVHQGNESLNHQKVKPMVAN 180
           ANDLSSGI+SALRRIELHILSLQRYTRS++SETKLAYYGQSV+QGNES N QKVKPMVAN
Sbjct: 160 ANDLSSGINSALRRIELHILSLQRYTRSHISETKLAYYGQSVNQGNESFNQQKVKPMVAN 219

Query: 181 HCSKFVHGFRIPLTQDKNEAMKQHELALPPTLMDKSGCPEGSKATARRAMKLNRTWIQEK 240
           HCSKFV+GFRIPLTQDK+EAMKQHEL LPPTLMDKSGCPEGSKATARRAMKLNRTWIQEK
Sbjct: 220 HCSKFVNGFRIPLTQDKDEAMKQHELVLPPTLMDKSGCPEGSKATARRAMKLNRTWIQEK 279

Query: 241 RSKNSRGRIVMRPTLW-------------HNETHLAAQQESEYTNSESESAPSSSPXXXX 300
           RSKNSRGRIVM+PTLW             HN  HLAAQQESE+TNSES S      XXXX
Sbjct: 280 RSKNSRGRIVMKPTLWHHPSREVRKEQTHHNRRHLAAQQESEFTNSESASC--XXXXXXX 339

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISREAFKFSHGKKESKKAVGRFKS 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  AVGRFKS
Sbjct: 340 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGRFKS 399

Query: 361 LRNKLGLI------XXXXXXXXXXXXXXXXXXXXXXFHRTGKKEQTSKEEKNGLLRKTTI 420
           LRNKLGLI      XXXXXXXXXXXXXX        FHRT KKE TSKEEK G LRKTTI
Sbjct: 400 LRNKLGLIFHHXXXXXXXXXXXXXXXXXMWKQVRTVFHRTDKKELTSKEEKTGKLRKTTI 459

Query: 421 RSVSRNNQVGKFQALAEGLRSHVWKSKAMKKKEQRGLNCGKKLHWWSAV 451
           RSVSRNNQVGKFQAL EGLRSHVWKSKAMKKKEQRGLNCGKKLHWW  +
Sbjct: 460 RSVSRNNQVGKFQALPEGLRSHVWKSKAMKKKEQRGLNCGKKLHWWKMI 506

[Close]

BLAST of Carg08491-RA vs. NCBI nr
Match: XP_022996027.1 (uncharacterized protein LOC111491355 isoform X2 [Cucurbita maxima])

HSP 1 Score: 593.2 bits (1528), Expect = 7.5e-166
Identity = 382/464 (82.33%), Postives = 392/464 (84.48%), Query Frame = 0


Query: 6   MEADKLYLDLLALRQLYFFLLKCCLRDANSELVVGGRAKILLKHLLDDATTGLLEFHSKT 65
           MEAD+LYLDLLALRQLYFFLLKCCLRDANSELVVG RAKILLKHLLDDATTGLLEFHSKT
Sbjct: 1   MEADELYLDLLALRQLYFFLLKCCLRDANSELVVGARAKILLKHLLDDATTGLLEFHSKT 60

Query: 66  PPLYNFQRKDDKQTTPLDEKVAEWMEHNQTARRMENPEKIEHKPRRDGASASNVAANDLS 125
              YNF RKDDKQT PLDEKVAEWMEHNQTARRM NPEKIEHKPRRD ASASNVAANDLS
Sbjct: 61  LAFYNFLRKDDKQTKPLDEKVAEWMEHNQTARRMANPEKIEHKPRRDRASASNVAANDLS 120

Query: 126 SGISSALRRIELHILSLQRYTRSNVSETKLAYYGQSVHQGNESLNHQKVKPMVANHCSKF 185
           SGI+SALRRIELHILSLQRYTRS++SETKLAYYGQSV+QGNES N QKVKPMVANHCSKF
Sbjct: 121 SGINSALRRIELHILSLQRYTRSHISETKLAYYGQSVNQGNESFNQQKVKPMVANHCSKF 180

Query: 186 VHGFRIPLTQDKNEAMKQHELALPPTLMDKSGCPEGSKATARRAMKLNRTWIQEKRSKNS 245
           V+GFRIPLTQDK+EAMKQHEL LPPTLMDKSGCPEGSKATARRAMKLNRTWIQEKRSKNS
Sbjct: 181 VNGFRIPLTQDKDEAMKQHELVLPPTLMDKSGCPEGSKATARRAMKLNRTWIQEKRSKNS 240

Query: 246 RGRIVMRPTLW-------------HNETHLAAQQESEYTNSESESAPSSSPXXXXXXXXX 305
           RGRIVM+PTLW             HN  HLAAQQESE+TNSES S      XXXXXXXXX
Sbjct: 241 RGRIVMKPTLWHHPSREVRKEQTHHNRRHLAAQQESEFTNSESASC--XXXXXXXXXXXX 300

Query: 306 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISREAFKFSHGKKESKKAVGRFKSLRNKL 365
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  AVGRFKSLRNKL
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGRFKSLRNKL 360

Query: 366 GLI------XXXXXXXXXXXXXXXXXXXXXXFHRTGKKEQTSKEEKNGLLRKTTIRSVSR 425
           GLI      XXXXXXXXXXXXXX        FHRT KKE TSKEEK G LRKTTIRSVSR
Sbjct: 361 GLIFHHXXXXXXXXXXXXXXXXXMWKQVRTVFHRTDKKELTSKEEKTGKLRKTTIRSVSR 420

Query: 426 NNQVGKFQALAEGLRSHVWKSKAMKKKEQRGLNCGKKLHWWSAV 451
           NNQVGKFQAL EGLRSHVWKSKAMKKKEQRGLNCGKKLHWW  +
Sbjct: 421 NNQVGKFQALPEGLRSHVWKSKAMKKKEQRGLNCGKKLHWWKMI 462

[Close]

BLAST of Carg08491-RA vs. TrEMBL
Match: tr|A0A1S3ASW8|A0A1S3ASW8_CUCME (uncharacterized protein LOC103482539 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482539 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 5.1e-70
Identity = 264/517 (51.06%), Postives = 314/517 (60.74%), Query Frame = 0


Query: 1   NLSDKMEADKLYLDLLALRQLYFFLLKCCLRDANSELVVGGRAKILLKHLLDDATTGLLE 60
           ++SD ME D LYLDLLALR+LY  LLK CLRD NSEL +  RA+IL+K LLDDAT+G+LE
Sbjct: 3   SVSDNMEVDDLYLDLLALRELYILLLKICLRDTNSEL-LDERAQILMKRLLDDATSGVLE 62

Query: 61  FHSK-----TPPLYNFQRKDDKQTTPLDEKVAEWMEHNQTARRMENPEKIEHKPRRDGAS 120
             SK     +  LYNF  KDDKQT P+D+KV EW++HNQTAR+MEN  K E  P RD AS
Sbjct: 63  VVSKNLAANSNILYNFLHKDDKQTKPVDKKVVEWLKHNQTARKMEN-SKFEQNPIRDRAS 122

Query: 121 ASNVAANDLSSGISSALRRIELHILSLQRYTRSNVSETKLAYYGQSVHQGNESLNHQK-- 180
           ASN A NDL  GI SALRRIELHILSLQ  T  +    K     Q V Q NE+LN QK  
Sbjct: 123 ASNTAFNDLPHGIVSALRRIELHILSLQHCTSQS---KKTRGNCQCVLQRNETLNQQKVH 182

Query: 181 ---------------VKPMVANHCSKFVHGFRIPLTQDKNEAM------------KQHEL 240
                          V P+V +  S+FVHG RIP +Q  +EA+            KQH++
Sbjct: 183 SKTDHSTLRTGFTKPVNPIVTHRSSEFVHGLRIPRSQGNDEAIMKPPIIEAHIMPKQHKV 242

Query: 241 ALPPTLMDKSGCPE-GSKATARRAMKLNRTWIQ-EKRSKNSRGRIVMRPTL--------- 300
             P   M KSGC   GSKAT R A+KL+ T  Q +K++++  G +VM PTL         
Sbjct: 243 VNP---MTKSGCTSVGSKATFRPAIKLDETSKQVKKKNQSPYGHMVMGPTLLDHHPSREL 302

Query: 301 ----WHNETHLAAQQESEYTN--------SESESAPSSSPXXXXXXXXXXXXXXXXXXXX 360
                HN  HL  Q+ESE +N                   XXXXXXXXXXXXXXXXXXXX
Sbjct: 303 RRERTHNNIHLPPQKESESSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 362

Query: 361 XXXXXXXXXXXXXXXXXXXNISREAFKFSHGKKESKKAVGRFKSLRNKLGLI----XXXX 420
           XXXXXXXXXXXXXXXXXXX          HG+KESK+AVG FK L+NKLG+I    XXXX
Sbjct: 363 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKESKQAVGPFKQLKNKLGVIXXXXXXXX 422

Query: 421 XXXXXXXXXXXXXXXXXXFHRTGKKEQTSKEEKNGLLRKTTIRSVSRNNQVGKFQALAEG 448
           XXXXXXXX           H+  +    SKE+K   ++   +RSV   NQV KF+ALAEG
Sbjct: 423 XXXXXXXXFMWKQLGKIFNHKENRGSVVSKEDKYEKVKNRAVRSVCDKNQVRKFEALAEG 482

[Close]

BLAST of Carg08491-RA vs. TrEMBL
Match: tr|A0A1S3ATG7|A0A1S3ATG7_CUCME (uncharacterized protein LOC103482539 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482539 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.6e-68
Identity = 262/512 (51.17%), Postives = 310/512 (60.55%), Query Frame = 0


Query: 6   MEADKLYLDLLALRQLYFFLLKCCLRDANSELVVGGRAKILLKHLLDDATTGLLEFHSK- 65
           ME D LYLDLLALR+LY  LLK CLRD NSEL +  RA+IL+K LLDDAT+G+LE  SK 
Sbjct: 1   MEVDDLYLDLLALRELYILLLKICLRDTNSEL-LDERAQILMKRLLDDATSGVLEVVSKN 60

Query: 66  ----TPPLYNFQRKDDKQTTPLDEKVAEWMEHNQTARRMENPEKIEHKPRRDGASASNVA 125
               +  LYNF  KDDKQT P+D+KV EW++HNQTAR+MEN  K E  P RD ASASN A
Sbjct: 61  LAANSNILYNFLHKDDKQTKPVDKKVVEWLKHNQTARKMEN-SKFEQNPIRDRASASNTA 120

Query: 126 ANDLSSGISSALRRIELHILSLQRYTRSNVSETKLAYYGQSVHQGNESLNHQK------- 185
            NDL  GI SALRRIELHILSLQ  T  +    K     Q V Q NE+LN QK       
Sbjct: 121 FNDLPHGIVSALRRIELHILSLQHCTSQS---KKTRGNCQCVLQRNETLNQQKVHSKTDH 180

Query: 186 ----------VKPMVANHCSKFVHGFRIPLTQDKNEAM------------KQHELALPPT 245
                     V P+V +  S+FVHG RIP +Q  +EA+            KQH++  P  
Sbjct: 181 STLRTGFTKPVNPIVTHRSSEFVHGLRIPRSQGNDEAIMKPPIIEAHIMPKQHKVVNP-- 240

Query: 246 LMDKSGCPE-GSKATARRAMKLNRTWIQ-EKRSKNSRGRIVMRPTL-------------W 305
            M KSGC   GSKAT R A+KL+ T  Q +K++++  G +VM PTL              
Sbjct: 241 -MTKSGCTSVGSKATFRPAIKLDETSKQVKKKNQSPYGHMVMGPTLLDHHPSRELRRERT 300

Query: 306 HNETHLAAQQESEYTN--------SESESAPSSSPXXXXXXXXXXXXXXXXXXXXXXXXX 365
           HN  HL  Q+ESE +N                   XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 HNNIHLPPQKESESSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 366 XXXXXXXXXXXXXXNISREAFKFSHGKKESKKAVGRFKSLRNKLGLI----XXXXXXXXX 425
           XXXXXXXXXXXXXX          HG+KESK+AVG FK L+NKLG+I    XXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXHGEKESKQAVGPFKQLKNKLGVIXXXXXXXXXXXXX 420

Query: 426 XXXXXXXXXXXXXFHRTGKKEQTSKEEKNGLLRKTTIRSVSRNNQVGKFQALAEGLRSHV 448
           XXX           H+  +    SKE+K   ++   +RSV   NQV KF+ALAEGLRSHV
Sbjct: 421 XXXFMWKQLGKIFNHKENRGSVVSKEDKYEKVKNRAVRSVCDKNQVRKFEALAEGLRSHV 480

[Close]

BLAST of Carg08491-RA vs. TrEMBL
Match: tr|A0A1S3ATF3|A0A1S3ATF3_CUCME (uncharacterized protein LOC103482539 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482539 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.1e-53
Identity = 233/471 (49.47%), Postives = 278/471 (59.02%), Query Frame = 0


Query: 47  LKHLLDDATTGLLEFHSK-----TPPLYNFQRKDDKQTTPLDEKVAEWMEHNQTARRMEN 106
           +K LLDDAT+G+LE  SK     +  LYNF  KDDKQT P+D+KV EW++HNQTAR+MEN
Sbjct: 1   MKRLLDDATSGVLEVVSKNLAANSNILYNFLHKDDKQTKPVDKKVVEWLKHNQTARKMEN 60

Query: 107 PEKIEHKPRRDGASASNVAANDLSSGISSALRRIELHILSLQRYTRSNVSETKLAYYGQS 166
             K E  P RD ASASN A NDL  GI SALRRIELHILSLQ  T  +    K     Q 
Sbjct: 61  -SKFEQNPIRDRASASNTAFNDLPHGIVSALRRIELHILSLQHCTSQS---KKTRGNCQC 120

Query: 167 VHQGNESLNHQK-----------------VKPMVANHCSKFVHGFRIPLTQDKNEAM--- 226
           V Q NE+LN QK                 V P+V +  S+FVHG RIP +Q  +EA+   
Sbjct: 121 VLQRNETLNQQKVHSKTDHSTLRTGFTKPVNPIVTHRSSEFVHGLRIPRSQGNDEAIMKP 180

Query: 227 ---------KQHELALPPTLMDKSGCPE-GSKATARRAMKLNRTWIQ-EKRSKNSRGRIV 286
                    KQH++  P   M KSGC   GSKAT R A+KL+ T  Q +K++++  G +V
Sbjct: 181 PIIEAHIMPKQHKVVNP---MTKSGCTSVGSKATFRPAIKLDETSKQVKKKNQSPYGHMV 240

Query: 287 MRPTL-------------WHNETHLAAQQESEYTN--------SESESAPSSSPXXXXXX 346
           M PTL              HN  HL  Q+ESE +N                   XXXXXX
Sbjct: 241 MGPTLLDHHPSRELRRERTHNNIHLPPQKESESSNXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 347 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISREAFKFSHGKKESKKAVGRFKSLR 406
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          HG+KESK+AVG FK L+
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKESKQAVGPFKQLK 360

Query: 407 NKLGLI----XXXXXXXXXXXXXXXXXXXXXXFHRTGKKEQTSKEEKNGLLRKTTIRSVS 448
           NKLG+I    XXXXXXXXXXXX           H+  +    SKE+K   ++   +RSV 
Sbjct: 361 NKLGVIXXXXXXXXXXXXXXXXFMWKQLGKIFNHKENRGSVVSKEDKYEKVKNRAVRSVC 420

[Close]

BLAST of Carg08491-RA vs. TrEMBL
Match: tr|A0A0A0KN38|A0A0A0KN38_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G167160 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.0e-49
Identity = 216/432 (50.00%), Postives = 256/432 (59.26%), Query Frame = 0


Query: 68  LYNFQRKDDKQTTPLDEKVAEWMEHNQTARRMENPEKIEHKPRRDGASASNVAANDLSSG 127
           LYNF  KDDKQT P+D+KV EWM+HNQTAR+MENP K E  P RD ASASN A NDL  G
Sbjct: 21  LYNFLHKDDKQTKPVDKKVVEWMKHNQTARKMENP-KFEQNPIRDRASASNTAFNDLPHG 80

Query: 128 ISSALRRIELHILSLQRYTRSNVSETKLAYYGQSVHQGNESLNHQK-------------- 187
           I SALRRIELHILSLQ  T  +    K     Q V   NE+LN QK              
Sbjct: 81  IISALRRIELHILSLQHCTSQS---RKTRGNCQCVLHRNETLNQQKVHSKTDHSTLRTGF 140

Query: 188 ---VKPMVANHCSKFVHGFRIPLTQDKNEAM------------KQHELALPPTLMDKSGC 247
              V P+   H S+FVHGFRIP +Q  +E +             QH++  P   M KSGC
Sbjct: 141 TKPVNPIETQHSSEFVHGFRIPRSQGNDETIMKPPIIETHVIPNQHKVVNP---MTKSGC 200

Query: 248 PE-GSK-ATARRAMKLNRTWIQEKRSKNSRGRIVMRPTLWHNETHLAAQQESEYTNSE-- 307
              GSK AT R AMKL++T  Q K++++  G +VM PTL  +      ++E  Y N+   
Sbjct: 201 TSVGSKAATFRPAMKLDQTSKQVKKNQSLYGHMVMGPTLLDHHPSREVRKEHTYNNTHLP 260

Query: 308 ----------SESAPSSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNI 367
                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 261 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXY 320

Query: 368 SREAFKFSHGKKESKKAVGRFKSLRNKLGL----IXXXXXXXXXXXXXXXXXXXXXXFHR 427
           S + F   HGKKESK+ VGRFK L+NKLG+     XXXXXXXXXXX            H+
Sbjct: 321 SMKTFNTKHGKKESKQRVGRFKQLKNKLGVXXXXXXXXXXXXXXXXNFMWKQLGKIFNHK 380

Query: 428 TGKKEQTSKEEKNGLLRKTTIRSVSRNNQVGKFQALAEGLRSHVWKSKAMKKKEQRGLNC 448
             +    SKE+K   ++   +RSV    QV KF+ALAEGLRSHV +SKAMK+KE +G+  
Sbjct: 381 EKRGSVVSKEDKYEKVKNRAVRSVCDKKQVRKFEALAEGLRSHV-RSKAMKRKEFKGMRY 440

The following BLAST results are available for this feature:

BLAST of Carg08491-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958321.1	3.7e-197	92.31	uncharacterized protein LOC111459571 isoform X1 [Cucurbita moschata]	[more]
XP_022958322.1	3.8e-194	92.22	uncharacterized protein LOC111459571 isoform X2 [Cucurbita moschata] >XP_0229583...	[more]
XP_023533016.1	5.5e-169	82.83	uncharacterized protein LOC111795024 [Cucurbita pepo subsp. pepo]	[more]
XP_022996025.1	7.2e-169	82.52	uncharacterized protein LOC111491355 isoform X1 [Cucurbita maxima] >XP_022996026...	[more]
XP_022996027.1	7.5e-166	82.33	uncharacterized protein LOC111491355 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg08491-RA vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg08491-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg08491-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3ASW8\|A0A1S3ASW8_CUCME	5.1e-70	51.06	uncharacterized protein LOC103482539 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3ATG7\|A0A1S3ATG7_CUCME	1.6e-68	51.17	uncharacterized protein LOC103482539 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3ATF3\|A0A1S3ATF3_CUCME	1.1e-53	49.47	uncharacterized protein LOC103482539 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KN38\|A0A0A0KN38_CUCSA	1.0e-49	50.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G167160 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg08491	Carg08491	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg08491-RA	Carg08491-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08491-RA.CDS.3	Carg08491-RA.CDS.3	CDS
Carg08491-RA.CDS.2	Carg08491-RA.CDS.2	CDS
Carg08491-RA.CDS.1	Carg08491-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08491-RA.exon.3	Carg08491-RA.exon.3	exon
Carg08491-RA.exon.2	Carg08491-RA.exon.2	exon
Carg08491-RA.exon.1	Carg08491-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..322