Carg08380-RA (mRNA) Silver-seed gourd

Overview
NameCarg08380-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionadagio protein 1-like
LocationCucurbita_argyrosperma_scaffold_015 : 1274183 .. 1283551 (-)
Sequence length339
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTGGGACAGCAATTCGGATCTGAGCGGAGACGAGGAGGACGAGGGCTTCTTACTCAACGATGGTGGGCCTCTTCCTTTTCCTGTGGAGAACTTGTTCCAAACTGCGCCATGTGGGTTCGTCGTCACCGATTCTCTTGAACCCGACCATCCCATCATCTATGTCAACACCGTCTTCGAAATGGTTTCTGGCTATCGGGCGGAGGAAGTGCTTGGTCGCAATTGGTCAGTTTATTTGTAAAATAGTCGTATTATATTGATTCACTGCTATTTATGTTATAATTCTGGACCTTATTTAGCTGTTGAATGCGTATTTTCTCTTCCTTTTGTTGGGGTGGGGTTATTTCGGTTGGTTAGAGACGGGCTGGCATTTGTTTTTGATGGTTATGTCTTGTGGTTTCTTGGGCGAATAGGAAGTCTTGGGCCTAGTTATTCTTTAATTGGTCAGTTAGCCTAATGTTGTATGGATTGGCAAGTTCTTGGTCTGTGTATATAGCTGATGGGTAGGTTGCTGGAAACCGTAGTGTGTTCTCTGGAAGGTATGATCGACATCCTTGCATTTCATTTCTTGGGACAATTTAGCTTCGTTGTGAGTTTTTGTAATCAGTTAAGTTTGAAGAATTCTACTCATACAAGTCTCCATAATGGGTCTCTTTTCTCAATATGAGATGAATCTTCCAAGGATGGGATACTCCGATAGGGTAGACGAGTAATCTTGTGCCTATGGAAATGAACGTCTCAATATGAGATGAATCTTCAAAGGATGGGATACTCTGATAGGGTAGATGAGTAATCTCGTGCTTATGTAAATGAACACTCCTTTACAAGAAGGCATATCATAAATAAAAGGCTTACTTACAACGATGGATATTTTGTTCCCAAACCGTGAAGTGATTATCTCTGAAAGGGAGCAATGAAATTAGTGCCAGTTTCTTAAGAAACCATTCTGTGCCTCATCATCCATATTCTGCAATTTTTATCAAGTTGTTGTACCATCATTTTCTATTTTATGTGGCATACAAGAATGACCTTTTTGTTCTTAGATTCTATTATTCTCATTTCAGCTATAAGAAATCTCGTCTAGGTTTCCTTTTTCCCTATTGTCTTGATGGAGGTTGTGGAATATTGGCGCTGTCAAAGTGTTTTTCTTATCAAGTAATCGCTACTTCTTACGCCCGATTATACAGCAAACCAAATCCCAAAGAAATTCAAAAGGTTTGCATGGATAGTTAGAAGCATACTATAGAAATCTTTTGATGCTAAAGCTTTTCTATTTGCAAAATTTAGAAGATGTGCGTTGCTTTCGAGGAAGCAAGCACCAACCACAAGATTTTGTACTACGACAGTATTCTTGGAATGAGGATTAGGCTTGTTGTTATAATTTTTCTTGTGATGCTATGTAGGGGAGGTATTTAGTCTGCTTTTGAGGCTGTAAAAGATGGAACTCTTAGGATTCTTATGATTCCGAGAAGCAAGGTTTTAGGTATTTTGAAGATTAGTGTGTATTGCCCTCTGACGGATGGACTTTATTTTTCATGCTTAGTTTGGTATCTTCAATACTTGAAGTTGGTGGAGATTTTTTACTGGAAAGTACTTTATAGATGGATTGTATAGAAAGCAGTAAAACCCCAAATCTAGGCAAAGGACAACAAGTTACGAAGTCATGATGTAATAGTAATAATAGATTGTAAAAAGAGTCTCAATGATTGGTTACTGAGTTTCAAGGAGTCTAGGGTTCATCAATTTGGTGAATACTTCTTGGTTAGGTTTTTGGTTGAGGACAAGGAGAAGAAATTATTCTCAAATAGGAATTTGTGGAGTTAAGTCACAAAGAGGGAGTAAGATTTCTACAAAAAAGAGCAAAAAAGGTTGGTTTGATTTAGTTAGATGACAATTCAGCAAGTTTTCATAGGTTAGTATGAACTTATGGCTTTTTCTAGTAATCTCGCGGATTTATTTGGGAAGTGGTGTGTTGGTAGCCAATCTTCTAGAATGGAAGTATTTGGCTCGAAACACGCTTTGAAGGAGGTGATGTTTATTAGCTTTGAAGAGTTTATACAAAAGCACGGGTCAAGATGGTTTTGACTTGAAAGACGACATTTTTCACAAAATTTTGGTTCTTTCTCAAGGATGAGGTCATGGAGGTGTTAAAGGATTTCCCGGTGAATGGTATTTTGAATTCCCCCATAAAGAGACTTCATTAGCTATGGTTAAAAAAGAAGTAAGGAATTTTTTCAGCAATCAGTTTGGTTCTTAGTGTATGCAAGATCATTTTTTTAATGAATAATCGAACTTTCATTTAGAACAAATGAAAGTATACAAAGGTGTACAAGAAACCAAGCTCACTAAAAGGGAGCAAAACTAAATAAATAGGCTCCAGTCAAGTAAAATAGACTTAAAAGGTTGATTACAACATCACTCGAGTCCCTAACAACACCTCTAAAGTCCTAATATTCATCTCTCCTTATAGGCCCTGCTTCCCTTAAGGGTGGATGGAGAAGGAGCTCCTTGACCATCTCTTTGCAATCCACATGTCTAGCAAACCGAAAGTTGAATGCTTGAAACAAACATCTCCAAACCGCTCCAACAAAGTCATAACTCTAAAATTATGATAAGTTCTTTGTTTCCTTCCAACAAAGAATGCATCCAAGTGAGCCTACTAAATTGGGCAACTTTCTCACTGATCGATCCAAGATGTTGAAATTTTTTCGTGAATGGCCTGTTACGTGAAAAACGTAACCTTCTCGGGAAATTTCACCTTCCACTATAAAGTAAAGAAACACACATTTGAGGGAGAGTGGTTCACCATACGCCAAAAGAGGGAATTATAAGAGATTTGGACTCTGAAGATGAATATCCCTTCGCCCTCAACTAATCTCCGACTCCTCAATCAAGGATAAAAGAGCCATAATGTCTTGGTTTCTTATCAGAAGATAGATGACAAAACCCCAATCAAAATGAGAGAGCCCATCTGCCACCCAATTTCTCATACATAGGGTAAAGAGGTCTATCCTCCAACCACTTATCCTACCAAAAATAAGTATCCCTCCCATCACTCACAAAAAACATAACAAATTGAGAAAAGAAGGGGAGCTCATCAAGGATTTTTGGAAGTGCATTTAGCCCTATGGACATTCGCCCAAAAGGGTGAGGACTATATTTGCTTGTGATAATTCTGTACCATAAGGTCTTAGATTCAAGGGGAAGCACTGCAATTATTTAGCCAACAAGGTCTCGGTTCGTGCCCTTACATTCCCTAATTCTATACCCCTAAGTCCATTGGCTTTGTGACCACCTCTCATTGCATAAGACAAGTCCCTTCCCCCCTTCAATCCTCTCCACCCCAAAATCCTTTGTAAACTTTTCATAAGTTTTACTAACAGTACTAGGGAATCTAAACATGGAAAAAATGTATACTGAGATACAACTCAAGAATGAACAAACAAAAGTCATCCTACCACTTTCTGAAAGTAGCTTTTCTCCCACGAGGCTACTCTCTATGAACCTTATCCACTACTGGATCCAAAAAGAGAAACTTCTTGGGTTTTGGCCAAGATGAAGGCCACAAATAGAACGAAGGGAATGAGCCAACCTTGCTCCCCGCAAGAGCAGCCCATCCATCCACCTTCTGCGGGTCACCATTCAAACCAAAATCTAACACTTGTCTTTGTTAATCTTAAGCCTATGTCTTGATGATTGCTCTAATGTGATTCAAATTGAGGAACAACCTTTCCTTCAATTAGTAGAAAAAGATGGTTTCATCAGTGAACTAAAAATGAGATGATCTTTATCCTTTCCAATCGCAGAACTTTCAAGAATATTGTCATCGACCTTGAGAAATAATTCTACTAAGAATATCCACTGTTAGCATAGAGTGAAAAGGAGGAGGATCACCATGTATAAGACCTCTCAAGGCTCAAATGCTATGGTGGCTTACCATTAATGAGAATGAAGTACGTAACTGTTTTGCTGCAACTCCAAATCTGCCATCTTCATTTACACCTGAAGTCTCTCTTCGCTAAATTTTGTCATGGAAGTTTCTATTCATGTGATCCTATGCCTTCTTGAAGTCTTAAAGTGACCCTCTTTTGTTTGGGAGTTCTATAATCCTCAATATCCTCATTATTAATAAGGGCTTGGTCTATAATTTGCTACCCCTAATAAGTAACAAATATATTGGTTAAAAGGTTAGTTGGTGTGCTGGATTCTACAGTGTTGTCCTTTCTTATTGCTTCTACAGAGGGGAGACAAATAATTGATACTTTACTTGTGGAAAATGAAATAATGATACAAATCCTTTCATCTTCCTCAATGTAACTTGGTTTCTTAGTAGGGAAAAAAAAAAAAAGGATTATCGAAAGGGGAAAAGATGGTTTAGTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAATAAGAATAGGAGATGGTTGTAATTATTTTCTTCGGCTTATTCTTTTGGATTGAAACCCTTTCTTGTATAGCTAGTTTGGTTTGAATCCAATGGGCCGTCTTTCTGTATGCCATTTTCTACTATTTTGTGTAAGAAAAGAAGAGAAAAGGGGCAAGCCAACAAAAAATGATCTTGAGAAAGCATAAAATATGACAGGTTGGGATTTTTTTGTTAATGGTTAATAAGTAAAAAGTAGATTGATCTTTGGAAGCTGTTGGTGGAGAAAGTTATGCATAATTGGGTAAATGGACGAAGTACTGTCATTTTGAAGGTAGTTCAGCTATTTATCAACTTGTATAGCTATATTACCAACCCTTTTCATGTCAATATTTCCTATACCAAACAGAGTGGTAGTAAATGTGGAAAGAAATATAAGAAACTTCCTTTGGCATGGTAAGGTGGCAAATTTCGAATTGGACATTTGAAAAGGTGTGAAATTTTATGGCAAATGAAGTAGTGATATTTCAGAGAAACTGATAAAGTTTGGCATAATGTGATCACTAGTATATATAGGCTAATGAAGGAGTGGTTAACTAGGGAGAAAAAAAGGATGAAGCACATAAGTTTTTGGTGGATATTTCCATGATAAAAAGAAAAACATAGTCTTAGAACACTCTTGAATCAACTTTGGAAATGGGAAGTGAATCAAATTTCAAGACAATCAGGATATTTAGATTATTTTCAACCACTTGCTCTAAAATTTCCAAATCGTTATACAACTGTCTGGGGAATGTGCATTTGATTGTTGGGATGATTTTGATGTGTTGGGATATTCTGACTTGGAGAAAGATGGAGGAAATTCAATTTAAGGAGTTTTTGATCTTGTAAAGCTACTTTAGATTAACCACTGCGGTTGGAAGAGATGTGAGGACTTGAAATAATAATATTGCCGGTGTCTTTTCCAGTAAATCTTGTTTTATCATCTGAGATTGTCGAAAAGTTGTTATGCTGAAGATTTCTTCGAGAAAACTTGAAACAGAAAGTGCCCCAAAAAGAAGTCTTTGTTTGATCAGCTTGTCTTTAGGATCAAAATACTTACCACCTTTAAAGGAAACACCCCATGTTGGCTTTGGACCCGTCAAGATTTTGTCTTCACTTTGGAGCTTGTGAAGGCTTGAAAGTTTGAGCCCACAAAGAAGTATTTGTTTGATCTTCCTGTCTCATAGTTATAGTTCATGGAGGATTAGTGCTCTTGTTTAATAATATTTGAATCATCATGGAATTTTCAAAATCTGTTTTGAGTGACCTTTTCAAGAGGAAAACAGAGAAACTTTGTACGAAGACCTTGAAATTTGTTTGGAGGTGTATTTGGAAGGAAAGAAACCACCATAATTTTCAATGGGCAAACGGGAGGTTTCGAGAAGTACTTGAGTTAGCTAAATTTTACATATATTTGTGTGTTTCCTTAGAAGTGATTAGAAATTATAGTGCCTTTACAATCAATTCTAACTGGGGTGGTTTTCTTTAAGTTACTTGGATAGTTTATCTGGGTGGTTTTAGCGGTGGTGCCTTTTGGGTGCGTTATTAGGTTGTAACACTGAAGAATTTGTTTTCTTGTTTCAAGAAAAAGGAAAATAAGATCACTTCTGTAAATGTGGATGAATGCTGCTGGTTTTTCAGAAAAAGATGGGCTCTTCATAAACCAAATCCCTTACAAGGGAAATTGGGTCGGTTGGGTTACAAAAATTTGAGAGTTTCTCTACAAACATATATGGGGAGGTTCTTATCCAAAATAGGGATAAAATTCTTTATTTGGGAGCCTAGTTTGTCGAGTATCAACATCCACGATGTTCTTCAAAGGAAATCCCCTTGGCTGTACATCTCTCCCTCACGCTGCCCTCGGTATATGGTGGATCTAGAAATAACTTTGCCAATGAATTTTGGAGCTTTAACTTATCATCTATGGACTGGGATTTGGTTCACCCAGGTGACATCTTCTCTTTCTAATGTTTAGATGGGACATCCTTTTAAAGATGAGAAGAAGACTCTTTGGTTGAATTTCATGAGGGCTTTCTTTTGGAGTTGTTGGCTCGAGCAGAATGGTCGTATCTCCAATGTGAAGAAGCATAACACACCAACTTTTGTAGATTCTATCATTTTCTTAGCTTTATCTTGGAGGAAGATAAAACATCCTCTTTGTAATTACAACTTAACTACTCTCGCTCCACAATGCACAAGCTTCTTGTAAATACTTCTTCATAGGGAATGTTTTTGTTTCCTGTAAGGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGATCACTTCTCCAATCTTCCCCATCGAAGAAATTTTATCATTCTCATTTTTAAAAATAAGTGGATGGACCACCCTTTTCATTTATGTGGAGAATGGGTGGAACTCTATGTTTAAGTGGTTGGCTGCCCGTTCTCTCCTCCTGACTATTCACGAATGAAAATCGTTTTATGTATGCTTTTCTTCTCTAGTATCAAATCTCTAAAGGGGCCGTCTCTAGTATCAAATTACTAATAGAATAATTTGTTCATTGACTGTCGCTTTATCTTGTAAGCTTTTCTTCTCTAGTATCAAATCTTTAAAGGGGCTCCTCTAACTCTTGGAGAATCCTTAGGCATACGCCTGTTGAAACAACATTAGGACAACATTTTAACAATGCATCCCAATAATGGGAGAGGGTTTCTTATGGATACAGATAAAAAAGATGGATTGTCTTGGCTTTGTTGGTAGAGTACACCTTTTTTGGAAACATAGACTTTGTATGACAAACATCATAAAGAAAAAGACCCCCTCCTGTTTCTTGGAAAAGTGATGGTTCAAATCTTTACTTTTGATTCTTCCTCTTCTAGGTCAAATTTTCACCATTGTTTGAAATGTCCTTTGAGCTAAGAAAGTTTGGAAAGATGAGCAGTCTTCTTATAAAGTTTCCTCTTTTAATATAGTGGCCTTAATTAAATAAAGGGAATTCGTGGCCGATGCAGCCTTCTCTCCCCCTTATGTTCTCTAATTTCCACGTGGCCTTTGTCGAGGGACCCTCCTATTGTTTATCGTGGAAGGTCCCTAAACAGGTTCAAGTCTATCTTAAAGAATATTATGGGAGGCATGTCTTTATCTTTTGTTCTAATAATAAGACTTCCACTTTAGGGAATGATCTTTCGGATGATGATGAATTTTCCAATGGAAGTGTTAGTAGTTACATGTCTTTTGATGGAGAAACCCTTATTGAAGATTTTAGTACTGGTCTTCTAGAAGACTTCATTAAAGGTTTCAACGAGGAACATATCTGGATCTGGCTTCGTTTTCAAGAATATATATGGATCTGAGCAAAATGGTCACTCCCAGGCCTTTTATCCCTATCATTTTGAAAAACTCAATTTTCCAGATTACTTTCATCAAGCTGCCATCACTCTTGTTCCTATCAATTGCAAGGGCAACTATGACAATTACAATTCCAAAACGACTGGAAGGTTCTAGTGTTTCTGCCATTCTCTGGTACTTCGGTTTGCTAGTTTTAAAATTCGGGTTTGGTTAGGTTGTTTGTGGGTTTATTTTATTCATTTATTTAAATGTTCTTGGTTGTGTGGAAGGAGTTTCTTTGTTCTTCTTTTGGTTGTTTTGGTTAGCTCGTGGGCTTTCTATGGTGTGCTTTTAGATTCTTTTTAGGTGATTTTATTTGTTTGGTTTTTTGTTGTTTGTTTTCCTCTTTTTGGAAGGTTGTTTCCTTGAATATTATCTTCGTAGTGTAAAGTCGTTTATCATTTAAAGCGAAATCCAGCTCAAAAAGCAACGCTTACATTTCTCATTTCCTCCAACTCAATATTTGGAGTTTAACCTTTCAATATTTGGAGTTGAAAAATTCATGGTATTAACACATGAATTTATTATTTATTCGGGTTCAAGGAGTCTAAATTTGTAGCTTAGTTCTTTGATTAGTGGGTCATGCATGCCCACTTTATCTATGCTTCAATCTTGAGAGCACCCCTTTTATCCCAAACCGAAGGAGACCTCTTACTCTCACCAGTTGCAACTTCCTTCTTGGTGAGGGCAACTACTCCTAAGAGGTTTTATGGGGGGGGGAAAGATGGAAGAAGTTAGAATATGTTTAGTAAACTATTCAAACTTTACATATATACGATACACCTGAGTATAACCAATGTTGTTTTCTAGCCGTATGTTTTTAGGGGCGATCAATCATGAGCAACACAAGTTCAACCTTTGGTTTGAGTGACCGATACTCTCCGTTGCTAGAAGGATACATTAGTTATTGTTCTACTTAGTTTTTGATACAGTACTAAATGGAAATCTTACAGTAGAAACTAGTAACTGAGGATGAGTTTTTTTTATCTTTGCTTCATAGGGTGTTCGATAAGATGGCTACACAAATATTTCTTCACAATCTCAATTCTGGCATTGTATGTATCTTAAATTAACAGTATTGTCACTAACTGAATTATGGCCTGCTTTGTATAAGTAACATTATTTTTCAGTATACTTGACGATTTGATCTGATGTATCTACATATAACTTACGTAGAGTTTTTTCTCTATGAACTTTCAAAGATCTCGATTCTGTATGTAAGATTTCAGAACACTTGGACGCCTAATGCCCGACCTAATATGATTGGAATTATTGATTTCACTAATGTTATGATGCTTTGGTTTTCTAATGGATGTGTATGCTTTCTCTCTATCTGCCAGCGCAGGATTACCCTAGCTTTTCGTTACACTCCATATTGATCTTTCTATTCATATATACTTAATACGTGATACTTGCTTACTAACACAGTTGGGATGTTCTTGCAGTCGGTTCTTGCAATGTAGAGGTCCATTTGCAAAAAGAAGGCACCCACTGGTTGACTCCTCAGTGGTTTCAGAAATCAGAAGATGTCTGGAGGATGGCACTGAATTTCAAGGCGAATTGTTGA

mRNA sequence

ATGGAGTGGGACAGCAATTCGGATCTGAGCGGAGACGAGGAGGACGAGGGCTTCTTACTCAACGATGGTGGGCCTCTTCCTTTTCCTGTGGAGAACTTGTTCCAAACTGCGCCATGTGGGTTCGTCGTCACCGATTCTCTTGAACCCGACCATCCCATCATCTATGTCAACACCGTCTTCGAAATGGTTTCTGGCTATCGGGCGGAGGAAGTGCTTGTCGGTTCTTGCAATGTAGAGGTCCATTTGCAAAAAGAAGGCACCCACTGGTTGACTCCTCAGTGGTTTCAGAAATCAGAAGATGTCTGGAGGATGGCACTGAATTTCAAGGCGAATTGTTGA

Coding sequence (CDS)

ATGGAGTGGGACAGCAATTCGGATCTGAGCGGAGACGAGGAGGACGAGGGCTTCTTACTCAACGATGGTGGGCCTCTTCCTTTTCCTGTGGAGAACTTGTTCCAAACTGCGCCATGTGGGTTCGTCGTCACCGATTCTCTTGAACCCGACCATCCCATCATCTATGTCAACACCGTCTTCGAAATGGTTTCTGGCTATCGGGCGGAGGAAGTGCTTGTCGGTTCTTGCAATGTAGAGGTCCATTTGCAAAAAGAAGGCACCCACTGGTTGACTCCTCAGTGGTTTCAGAAATCAGAAGATGTCTGGAGGATGGCACTGAATTTCAAGGCGAATTGTTGA

Protein sequence

MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSCNVEVHLQKEGTHWLTPQWFQKSEDVWRMALNFKANC
Homology
[Close]
BLAST of Carg08380-RA vs. NCBI nr
Match: XP_022929649.1 (adagio protein 1-like [Cucurbita moschata] >XP_023547224.1 adagio protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156.0 bits (393), Expect = 7.6e-35
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 1  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVSGYRAEEVLVGSC 77
          EMVSGYRAEEVL  +C
Sbjct: 61 EMVSGYRAEEVLGRNC 76

[Close]
BLAST of Carg08380-RA vs. NCBI nr
Match: XP_022997395.1 (adagio protein 1-like [Cucurbita maxima])

HSP 1 Score: 156.0 bits (393), Expect = 7.6e-35
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 1  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVSGYRAEEVLVGSC 77
          EMVSGYRAEEVL  +C
Sbjct: 61 EMVSGYRAEEVLGRNC 76

[Close]
BLAST of Carg08380-RA vs. NCBI nr
Match: XP_004148329.1 (PREDICTED: adagio protein 1 [Cucumis sativus] >KGN61146.1 hypothetical protein Csa_2G059770 [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 4.9e-34
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 1  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEE+EGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVSGYRAEEVLVGSC 77
          EMV+GYRAEEVL  +C
Sbjct: 61 EMVTGYRAEEVLGRNC 76

[Close]
BLAST of Carg08380-RA vs. NCBI nr
Match: XP_008451638.1 (PREDICTED: LOW QUALITY PROTEIN: adagio protein 1 [Cucumis melo])

HSP 1 Score: 153.3 bits (386), Expect = 4.9e-34
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 1  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEE+EGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVSGYRAEEVLVGSC 77
          EMV+GYRAEEVL  +C
Sbjct: 61 EMVTGYRAEEVLGRNC 76

[Close]
BLAST of Carg08380-RA vs. NCBI nr
Match: XP_022153359.1 (adagio protein 1 [Momordica charantia])

HSP 1 Score: 153.3 bits (386), Expect = 4.9e-34
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 1  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEE+EGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVSGYRAEEVLVGSC 77
          EMV+GYRAEEVL  +C
Sbjct: 61 EMVTGYRAEEVLGRNC 76

[Close]
BLAST of Carg08380-RA vs. TAIR10
Match: AT5G57360.2 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 117.9 bits (294), Expect = 4.1e-27
Identity = 56/82 (68.29%), Postives = 65/82 (79.27%), Query Frame = 0 

Query: 1  MEWDSNSDLSGD------EEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPII 60
          MEWDS SDLS D      +++EG L   GGP+P+PV NL  TAPCGFVVTD++EPD PII
Sbjct: 1  MEWDSGSDLSADDASSLADDEEGGLFPGGGPIPYPVGNLLHTAPCGFVVTDAVEPDQPII 60

Query: 61 YVNTVFEMVSGYRAEEVLVGSC 77
          YVNTVFEMV+GYRAEEVL G+C
Sbjct: 61 YVNTVFEMVTGYRAEEVLGGNC 82

[Close]
BLAST of Carg08380-RA vs. TAIR10
Match: AT2G18915.2 (LOV KELCH protein 2)

HSP 1 Score: 107.5 bits (267), Expect = 5.6e-24
Identity = 51/78 (65.38%), Postives = 65/78 (83.33%), Query Frame = 0 

Query: 1  MEWDSNSDLSGDEE--DEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNT 60
          MEWDS+SDLSG +E  ++G+   D G +PFPV +L  TAPCGFVV+D+LEPD+PIIYVNT
Sbjct: 5  MEWDSDSDLSGGDEVAEDGWFGGDNGAIPFPVGSLPGTAPCGFVVSDALEPDNPIIYVNT 64

Query: 61 VFEMVSGYRAEEVLVGSC 77
          VFE+V+GYRAEEV+  +C
Sbjct: 65 VFEIVTGYRAEEVIGRNC 82

[Close]
BLAST of Carg08380-RA vs. TAIR10
Match: AT1G68050.1 (flavin-binding, kelch repeat, f box 1)

HSP 1 Score: 57.4 bits (137), Expect = 6.6e-09
Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 0 

Query: 34 FQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC 77
          +   P  F+V+D+LEPD P+IYVN VFE+ +GYRA+EVL  +C
Sbjct: 49 YPMTPPSFIVSDALEPDFPLIYVNRVFEVFTGYRADEVLGRNC 91

[Close]
BLAST of Carg08380-RA vs. Swiss-Prot
Match: sp|Q94BT6|ADO1_ARATH (Adagio protein 1 OS=Arabidopsis thaliana OX=3702 GN=ADO1 PE=1 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 7.5e-26
Identity = 56/82 (68.29%), Postives = 65/82 (79.27%), Query Frame = 0 

Query: 1  MEWDSNSDLSGD------EEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPII 60
          MEWDS SDLS D      +++EG L   GGP+P+PV NL  TAPCGFVVTD++EPD PII
Sbjct: 1  MEWDSGSDLSADDASSLADDEEGGLFPGGGPIPYPVGNLLHTAPCGFVVTDAVEPDQPII 60

Query: 61 YVNTVFEMVSGYRAEEVLVGSC 77
          YVNTVFEMV+GYRAEEVL G+C
Sbjct: 61 YVNTVFEMVTGYRAEEVLGGNC 82

[Close]
BLAST of Carg08380-RA vs. Swiss-Prot
Match: sp|Q8W420|ADO2_ARATH (Adagio protein 2 OS=Arabidopsis thaliana OX=3702 GN=ADO2 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.0e-22
Identity = 51/78 (65.38%), Postives = 65/78 (83.33%), Query Frame = 0 

Query: 1  MEWDSNSDLSGDEE--DEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNT 60
          MEWDS+SDLSG +E  ++G+   D G +PFPV +L  TAPCGFVV+D+LEPD+PIIYVNT
Sbjct: 5  MEWDSDSDLSGGDEVAEDGWFGGDNGAIPFPVGSLPGTAPCGFVVSDALEPDNPIIYVNT 64

Query: 61 VFEMVSGYRAEEVLVGSC 77
          VFE+V+GYRAEEV+  +C
Sbjct: 65 VFEIVTGYRAEEVIGRNC 82

[Close]
BLAST of Carg08380-RA vs. Swiss-Prot
Match: sp|Q5Z8K3|ADO1_ORYSJ (Adagio-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0694000 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.7e-09
Identity = 38/95 (40.00%), Postives = 46/95 (48.42%), Query Frame = 0 

Query: 1  MEWDSNSDLSGD------------------EEDEGFLLNDGGPLPFPVENLFQ-TAPCGF 60
          MEWDS SD +G                                  F +E + + + PCG 
Sbjct: 1  MEWDSESDGAGSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSFAIEGMLRASGPCGL 60

Query: 61 VVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC 77
          VVTD+LEPD PIIYVN  FE  +GYRAEEVL  +C
Sbjct: 61 VVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNC 95

[Close]
BLAST of Carg08380-RA vs. Swiss-Prot
Match: sp|Q9C9W9|ADO3_ARATH (Adagio protein 3 OS=Arabidopsis thaliana OX=3702 GN=ADO3 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 0 

Query: 34 FQTAPCGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC 77
          +   P  F+V+D+LEPD P+IYVN VFE+ +GYRA+EVL  +C
Sbjct: 49 YPMTPPSFIVSDALEPDFPLIYVNRVFEVFTGYRADEVLGRNC 91

[Close]
BLAST of Carg08380-RA vs. Swiss-Prot
Match: sp|Q67UX0|ADO2_ORYSJ (Putative adagio-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0150800 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.6e-07
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 39 CGFVVTDSLEPDHPIIYVNTVFEMVSGYRAEEVLVGSC 77
          CG VV+D+LEPD PIIYVN  FE  +GYRAEEVL  +C
Sbjct: 54 CGLVVSDALEPDFPIIYVNRGFEDATGYRAEEVLGRNC 91

[Close]
BLAST of Carg08380-RA vs. TrEMBL
Match: tr|A0A1S3BRY3|A0A1S3BRY3_CUCME (LOW QUALITY PROTEIN: adagio protein 1 OS=Cucumis melo OX=3656 GN=LOC103492868 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.2e-34
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 1  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEE+EGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVSGYRAEEVLVGSC 77
          EMV+GYRAEEVL  +C
Sbjct: 61 EMVTGYRAEEVLGRNC 76

[Close]
BLAST of Carg08380-RA vs. TrEMBL
Match: tr|A0A0A0LME5|A0A0A0LME5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059770 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.2e-34
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 1  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGDEE+EGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60

Query: 61 EMVSGYRAEEVLVGSC 77
          EMV+GYRAEEVL  +C
Sbjct: 61 EMVTGYRAEEVLGRNC 76

[Close]
BLAST of Carg08380-RA vs. TrEMBL
Match: tr|A0A1R3JYA3|A0A1R3JYA3_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_03630 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-31
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 0 

Query: 1  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGD EDEGFLLNDGGPLPFPVENL QTAPCGFVVTD+LEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGD-EDEGFLLNDGGPLPFPVENLLQTAPCGFVVTDALEPDHPIIYVNTVF 60

Query: 61 EMVSGYRAEEVLVGSC 77
          EMV+GYRAEEVL  +C
Sbjct: 61 EMVTGYRAEEVLGRNC 75

[Close]
BLAST of Carg08380-RA vs. TrEMBL
Match: tr|A0A140F7G4|A0A140F7G4_CHRIA (Putative LOV domain-containing protein OS=Chrysobalanus icaco OX=22978 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.0e-31
Identity = 68/76 (89.47%), Postives = 72/76 (94.74%), Query Frame = 0 

Query: 1  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGD EDEGF+LNDGGPLPFPVENL QTAPCGFVVTD+LEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGD-EDEGFMLNDGGPLPFPVENLLQTAPCGFVVTDALEPDHPIIYVNTVF 60

Query: 61 EMVSGYRAEEVLVGSC 77
          EMV+GYRAEEVL  +C
Sbjct: 61 EMVTGYRAEEVLGRNC 75

[Close]
BLAST of Carg08380-RA vs. TrEMBL
Match: tr|A0A061GR21|A0A061GR21_THECC (Galactose oxidase/kelch repeat superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_039159 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.6e-31
Identity = 68/76 (89.47%), Postives = 72/76 (94.74%), Query Frame = 0 

Query: 1  MEWDSNSDLSGDEEDEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVF 60
          MEWDSNSDLSGD EDEGFLLNDGGPLPFPV+NL QTAPCGFVVTD+LEPDHPIIYVNTVF
Sbjct: 1  MEWDSNSDLSGD-EDEGFLLNDGGPLPFPVQNLLQTAPCGFVVTDALEPDHPIIYVNTVF 60

Query: 61 EMVSGYRAEEVLVGSC 77
          EMV+GYRAEEVL  +C
Sbjct: 61 EMVTGYRAEEVLGRNC 75

The following BLAST results are available for this feature:
BLAST of Carg08380-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022929649.17.6e-3596.05adagio protein 1-like [Cucurbita moschata] >XP_023547224.1 adagio protein 1-like... [more]
XP_022997395.17.6e-3596.05adagio protein 1-like [Cucurbita maxima][more]
XP_004148329.14.9e-3493.42PREDICTED: adagio protein 1 [Cucumis sativus] >KGN61146.1 hypothetical protein C... [more]
XP_008451638.14.9e-3493.42PREDICTED: LOW QUALITY PROTEIN: adagio protein 1 [Cucumis melo][more]
XP_022153359.14.9e-3493.42adagio protein 1 [Momordica charantia][more]
BLAST of Carg08380-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT5G57360.24.1e-2768.29Galactose oxidase/kelch repeat superfamily protein[more]
AT2G18915.25.6e-2465.38LOV KELCH protein 2[more]
AT1G68050.16.6e-0955.81flavin-binding, kelch repeat, f box 1[more]
BLAST of Carg08380-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q94BT6|ADO1_ARATH7.5e-2668.29Adagio protein 1 OS=Arabidopsis thaliana OX=3702 GN=ADO1 PE=1 SV=2[more]
sp|Q8W420|ADO2_ARATH1.0e-2265.38Adagio protein 2 OS=Arabidopsis thaliana OX=3702 GN=ADO2 PE=1 SV=1[more]
sp|Q5Z8K3|ADO1_ORYSJ3.7e-0940.00Adagio-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0694000 P... [more]
sp|Q9C9W9|ADO3_ARATH1.2e-0755.81Adagio protein 3 OS=Arabidopsis thaliana OX=3702 GN=ADO3 PE=1 SV=1[more]
sp|Q67UX0|ADO2_ORYSJ1.6e-0768.42Putative adagio-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g... [more]
BLAST of Carg08380-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BRY3|A0A1S3BRY3_CUCME3.2e-3493.42LOW QUALITY PROTEIN: adagio protein 1 OS=Cucumis melo OX=3656 GN=LOC103492868 PE... [more]
tr|A0A0A0LME5|A0A0A0LME5_CUCSA3.2e-3493.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059770 PE=4 SV=1[more]
tr|A0A1R3JYA3|A0A1R3JYA3_COCAP1.2e-3190.79Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_03630 PE=4 ... [more]
tr|A0A140F7G4|A0A140F7G4_CHRIA2.0e-3189.47Putative LOV domain-containing protein OS=Chrysobalanus icaco OX=22978 PE=2 SV=1[more]
tr|A0A061GR21|A0A061GR21_THECC2.6e-3189.47Galactose oxidase/kelch repeat superfamily protein OS=Theobroma cacao OX=3641 GN... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR035965PAS-like_dom_sf
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg08380Carg08380gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg08380-RA.CDS.2Carg08380-RA.CDS.2CDS
Carg08380-RA.CDS.1Carg08380-RA.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg08380-RA.exon.2Carg08380-RA.exon.2exon
Carg08380-RA.exon.1Carg08380-RA.exon.1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg08380-RACarg08380-RA-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.450.20coord: 29..104
e-value: 3.9E-11
score: 44.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
IPR035965PAS domain superfamilySUPERFAMILYSSF55785PYP-like sensor domain (PAS domain)coord: 32..72