Carg08171-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08171-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Alpha/Beta hydrolase fold containing protein
Location	Cucurbita_argyrosperma_scaffold_050 : 1115616 .. 1118632 (-)
Sequence length	1852

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAAGCCGCGATGTTGAGCGGCGGTGTCGGCGGTGGAAGCGTTTACTGGGGCACGAGGAACGAGCCCAGGATTTGTAGAGGGGTTGTCGTTCTCTTCGCTTGGGTTTCGATTCAGCATCGTCACTTGGATAAGTTTGTCCAGCTTTACGCCTCGCTTGGATGGAATTCCCTTGTTTGTTATGCTGATTTTCTCAATATGTGAGTTCTTCTTTCTTGTTCTTCGTTAATACTCTTCATCGTATGAGGATTTGGGTATTAGTCATGGATGTTTTAGTCTGTCTTCTTCATCTGTGTTCTTCGGTTCTTGAATTGCGAGTTTTCCCATCTAGTTATGAACAGAATTGAGGGGTTTTCGTTTTCTGTATTGAAATTTGGTGTTTGTGTTGGGAAAGAATTGGACCTGACCTGAAATTCCCATTTCATTCGGATTTGTTCTTAAATGGTTTATGTTTAACAAATTGTTCTGTTCTTGCTGACCGTAATACGTTCAGATTTGATCCTGAAAGAGCTACATCACTGGCATTTCTTGTTCTTAATGAGCTCGTTGAGGTCAGTGGCAGGCATTTCTCTCTTATTTTGTATGGCTTTTCATTCGATGAATTTCTCAATGGCTACGATTTTGTAACGATATGGTTTAAATTATCTCTACAGGAGCTAAGAATGAGGCTGCGTCCTGTAGTTTTTGTAGGTCTAAGTGGTGCATCAAAGGCTTGTATGTGCAGAGTTTTGCAGGTGACTTAGTTCACTTACAGAGAATTCTCCATCTAATGCTTAAATTTTCCATTGAATATGTAACTTTGATGCAACTCCTACCGTGTTAATGAATGAATTGCTGCATAAATTGCAGATCATTGAGGGAAGATGTGGCAGTCCACTTTACATGGTTAGCTTTTCATTGATTTATATTCTTTAAGGTTCTCTTTTAAACAATGCTGCATTGTGTTATTAATTCGGTTTCGAATGATATTTTTGTCGCCTTCTTTTTACTGTGAAGGCGGAATGTCAAATGATCAGAGCTTGTGTTTCTGGGCACATCTATGATTCCAGTCCCATAGAGCTTATAAGTGACTTGGGCGCTCGATTTGCCATACATCCTGCTATTCGAAAAGTGCCGGGATCGTCACAACTCATCTCCTGGCTTGCTAAAGGCGTCTCTTCTGGCCTTGATGCTCTGTATCTTACTAGATTTGATTCACAGCGCGATGAGTATTGGCGAACACTGTGTTCATCTGTTGTAAGCTTCCTAATTTAGTTTTTAGCTTCCTGAACTTTGTTTCATATTCTGAAGTTAATAAGTTTTCTTGCTTTTCTTAGAATATTGGTGCCCCATTTCTCATTATGTGCTCTGAAAAGGACGATCGTGCTCCGTATAAAGTTATCTGTGATTTCACCAAGAGTATTCAAGAATTAGGGGCTGATGTTCAGTTGGTAAAATTCAAAGACTCCCCACACTTAGGTTTGTCTCAAACTTAATATTTACTTTGTAGTACGTTCTCTTGACTACCATGTCTATGAGGGTTATTGATAACTGTGAGATCTCACATCAGTTGGAGAGGAGAACAAAACATTCCTTATAAGGGTGTGGAAACCTCTTCCTAGCAAACGCATTTTAAAACCTTGAGAGGAAGTTTTTGAAGAGAAAGCCCAAAGAGGTCAGGTTTGAGCTATTACAAATGGAATCAGAGCTAGTCACTAGGGGGAGGATATTAACCTAGTCCGACTGACCTTCTTTGACTGGCCCCCGCCCTTGTAACAAGGTCAACTTGTACGTGCTTTTCCTTTCGTTTAGCAGCAGTATGAAAAGCGGAATCCTCATCCTGAGTCGAGTCCGCATTGCCATACGGTTTTATATGATTGGTCGTGCTTTTTCCTTATTAGCCGGTAGAAATTTGTAGTTTGATGTTTAATTTCCTTTGTAAATCTCGAGTTCAACGTGCATAAGCAAGATTTGAATGAGAGATTCTAGCAGCTTGTCTGATGTGATATCTATTTCATGTCAGGTCATTACAAAAATTACCCAGCTCAATATAGAGCTGCTGTGACCATATTTCTTGAGAAGGCATCATCAGCTTACTCCCACAAAATCCCACAATTTAAAGGAGAAAGAAGAGGAATGGAAGGCGATGGAATGCCTGAATTGATATGTGACCTTCAGAATGCAGCAGTTAATTCAAACCAGAGTTTTCGAAGAGTCGCAGTCGGGCCAAGTGATCACTTCTTCTTGCCAAGCTCAGCAGATTCCCAGGACGGTCGGGAGCATCATCCTCCCATGCCTGATCAGAAAGAAAGAATATCTCCACTTTCAAGCCCCCAAGGACTCAGTGCACACAGCGTACTCGGCCAGTTCCTCTTCGACGTTTGTGTGCCCAAAAATGTTGAAGGTTGGGACATCAAGTTCCACGGCTCTCTGAACGGGCAACCACTTGCTTCAGCTCGCAGGCACTCTCCATTCCCCGGTACAAAGCTTATCCGTCGCTCTAGACTGTGAAAAACTGAGGTTTTAGCTGTGTGAGTTTATTATCATCTAACCTATAGCTACCACATCTAGTTCAAATACTAGCCAGAGAATCCCTCCCTTATGGTAGTATTAGCAAAATATTAGGAGGTTGTACCTCTGTGGGGAACGAAAGGGTGGCTCAGCGTCGCACTGGTAAAATTGTACGTATGAATCACACAGAGGTCTTGCAGTATATGCAAAGACGTAGAAGTTACAGACTACTCTATGGAGCGATAGGTTGCGACGACAGGCTCAGAAATAGGTTAGAGAAGTGTTGTATGACGATGACGACGACAACGACGATACACAGTAGCCAGGGGGTATCTTGTTGATAGAGTTTAGTGTAGAGAAGGAAAGTGTAAAAAGAGAAACCTCCACTCCACTCTGTTGACAGAACTGTTAGTTGGACTGTTGGAAGTTTGAATAATGTGTATACTTCAACTAAACAAACAACCAAGATTAGCAATTATGATCGCACATATATTCATTTTAACAGACATTTAAACTACATCTGAAAAT

mRNA sequence

TCTAAGCCGCGATGTTGAGCGGCGGTGTCGGCGGTGGAAGCGTTTACTGGGGCACGAGGAACGAGCCCAGGATTTGTAGAGGGGTTGTCGTTCTCTTCGCTTGGGTTTCGATTCAGCATCGTCACTTGGATAAGTTTGTCCAGCTTTACGCCTCGCTTGGATGGAATTCCCTTGTTTGTTATGCTGATTTTCTCAATATATTTGATCCTGAAAGAGCTACATCACTGGCATTTCTTGTTCTTAATGAGCTCGTTGAGGAGCTAAGAATGAGGCTGCGTCCTGTAGTTTTTGTAGGTCTAAGTGGTGCATCAAAGGCTTGTATGTGCAGAGTTTTGCAGATCATTGAGGGAAGATGTGGCAGTCCACTTTACATGGCGGAATGTCAAATGATCAGAGCTTGTGTTTCTGGGCACATCTATGATTCCAGTCCCATAGAGCTTATAAGTGACTTGGGCGCTCGATTTGCCATACATCCTGCTATTCGAAAAGTGCCGGGATCGTCACAACTCATCTCCTGGCTTGCTAAAGGCGTCTCTTCTGGCCTTGATGCTCTGTATCTTACTAGATTTGATTCACAGCGCGATGAGTATTGGCGAACACTGTGTTCATCTGTTGTAAGCTTCCTAATTTAGTTTTTAGCTTCCTGAACTTTGTTTCATATTCTGAAGTTAATAAGTTTTCTTGCTTTTCTTAGAATATTGGTGCCCCATTTCTCATTATGTGCTCTGAAAAGGACGATCGTGCTCCGTATAAAGTTATCTGTGATTTCACCAAGAGTATTCAAGAATTAGGGGCTGATGTTCAGTTGGTAAAATTCAAAGACTCCCCACACTTAGGTCATTACAAAAATTACCCAGCTCAATATAGAGCTGCTGTGACCATATTTCTTGAGAAGGCATCATCAGCTTACTCCCACAAAATCCCACAATTTAAAGGAGAAAGAAGAGGAATGGAAGGCGATGGAATGCCTGAATTGATATGTGACCTTCAGAATGCAGCAGTTAATTCAAACCAGAGTTTTCGAAGAGTCGCAGTCGGGCCAAGTGATCACTTCTTCTTGCCAAGCTCAGCAGATTCCCAGGACGGTCGGGAGCATCATCCTCCCATGCCTGATCAGAAAGAAAGAATATCTCCACTTTCAAGCCCCCAAGGACTCAGTGCACACAGCGTACTCGGCCAGTTCCTCTTCGACGTTTGTGTGCCCAAAAATGTTGAAGGTTGGGACATCAAGTTCCACGGCTCTCTGAACGGGCAACCACTTGCTTCAGCTCGCAGGCACTCTCCATTCCCCGGTACAAAGCTTATCCGTCGCTCTAGACTGTGAAAAACTGAGGTTTTAGCTGTGTGAGTTTATTATCATCTAACCTATAGCTACCACATCTAGTTCAAATACTAGCCAGAGAATCCCTCCCTTATGGTAGTATTAGCAAAATATTAGGAGGTTGTACCTCTGTGGGGAACGAAAGGGTGGCTCAGCGTCGCACTGGTAAAATTGTACGTATGAATCACACAGAGGTCTTGCAGTATATGCAAAGACGTAGAAGTTACAGACTACTCTATGGAGCGATAGGTTGCGACGACAGGCTCAGAAATAGGTTAGAGAAGTGTTGTATGACGATGACGACGACAACGACGATACACAGTAGCCAGGGGGTATCTTGTTGATAGAGTTTAGTGTAGAGAAGGAAAGTGTAAAAAGAGAAACCTCCACTCCACTCTGTTGACAGAACTGTTAGTTGGACTGTTGGAAGTTTGAATAATGTGTATACTTCAACTAAACAAACAACCAAGATTAGCAATTATGATCGCACATATATTCATTTTAACAGACATTTAAACTACATCTGAAAAT

Coding sequence (CDS)

ATGTTGAGCGGCGGTGTCGGCGGTGGAAGCGTTTACTGGGGCACGAGGAACGAGCCCAGGATTTGTAGAGGGGTTGTCGTTCTCTTCGCTTGGGTTTCGATTCAGCATCGTCACTTGGATAAGTTTGTCCAGCTTTACGCCTCGCTTGGATGGAATTCCCTTGTTTGTTATGCTGATTTTCTCAATATATTTGATCCTGAAAGAGCTACATCACTGGCATTTCTTGTTCTTAATGAGCTCGTTGAGGAGCTAAGAATGAGGCTGCGTCCTGTAGTTTTTGTAGGTCTAAGTGGTGCATCAAAGGCTTGTATGTGCAGAGTTTTGCAGATCATTGAGGGAAGATGTGGCAGTCCACTTTACATGGCGGAATGTCAAATGATCAGAGCTTGTGTTTCTGGGCACATCTATGATTCCAGTCCCATAGAGCTTATAAGTGACTTGGGCGCTCGATTTGCCATACATCCTGCTATTCGAAAAGTGCCGGGATCGTCACAACTCATCTCCTGGCTTGCTAAAGGCGTCTCTTCTGGCCTTGATGCTCTGTATCTTACTAGATTTGATTCACAGCGCGATGAGTATTGGCGAACACTGTGTTCATCTGTTGTAAGCTTCCTAATTTAG

Protein sequence

MLSGGVGGGSVYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADFLNIFDPERATSLAFLVLNELVEELRMRLRPVVFVGLSGASKACMCRVLQIIEGRCGSPLYMAECQMIRACVSGHIYDSSPIELISDLGARFAIHPAIRKVPGSSQLISWLAKGVSSGLDALYLTRFDSQRDEYWRTLCSSVVSFLI

Homology

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BLAST of Carg08171-RA vs. NCBI nr
Match: XP_022942978.1 (uncharacterized protein LOC111447853 [Cucurbita moschata])

HSP 1 Score: 412.1 bits (1058), Expect = 1.1e-111
Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MLSGGVGGGSVYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADF 60
           MLSGGVGGGSVYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADF
Sbjct: 1   MLSGGVGGGSVYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADF 60

Query: 61  LNIFDPERATSLAFLVLNELVEELRMRLRPVVFVGLSGASKACMCRVLQIIEGRCGSPLY 120
           LNIFDPERATSLAFLVLNELVEELRM+LRPVVFVGLSGASKACMCRVLQIIEGRCGSPLY
Sbjct: 61  LNIFDPERATSLAFLVLNELVEELRMKLRPVVFVGLSGASKACMCRVLQIIEGRCGSPLY 120

Query: 121 MAECQMIRACVSGHIYDSSPIELISDLGARFAIHPAIRKVPGSSQLISWLAKGVSSGLDA 180
           MAECQMIRACVSGHIYDSSPIELISDLGARFAIHPAIRKVPGSSQLISWLAKGVSSGLDA
Sbjct: 121 MAECQMIRACVSGHIYDSSPIELISDLGARFAIHPAIRKVPGSSQLISWLAKGVSSGLDA 180

Query: 181 LYLTRFDSQRDEYWRTLCSSV 202
           LYLTRFDSQRDEYWRTLCSSV
Sbjct: 181 LYLTRFDSQRDEYWRTLCSSV 201

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BLAST of Carg08171-RA vs. NCBI nr
Match: XP_022981161.1 (uncharacterized protein LOC111480388 [Cucurbita maxima])

HSP 1 Score: 407.5 bits (1046), Expect = 2.6e-110
Identity = 197/201 (98.01%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MLSGGVGGGSVYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADF 60
           MLSGGVGGGSVYWG+RNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADF
Sbjct: 1   MLSGGVGGGSVYWGSRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADF 60

Query: 61  LNIFDPERATSLAFLVLNELVEELRMRLRPVVFVGLSGASKACMCRVLQIIEGRCGSPLY 120
           LNIFDPERATSLAFLVLNELVEELRM+LRPVVFVGLSGASKACMCRVLQIIEGRCGSPLY
Sbjct: 61  LNIFDPERATSLAFLVLNELVEELRMKLRPVVFVGLSGASKACMCRVLQIIEGRCGSPLY 120

Query: 121 MAECQMIRACVSGHIYDSSPIELISDLGARFAIHPAIRKVPGSSQLISWLAKGVSSGLDA 180
           MAECQMIRACVSGHIYDSSPIELISDLGARFAIHPA+ KVPGSSQLISWLAKGVSSGLDA
Sbjct: 121 MAECQMIRACVSGHIYDSSPIELISDLGARFAIHPAVLKVPGSSQLISWLAKGVSSGLDA 180

Query: 181 LYLTRFDSQRDEYWRTLCSSV 202
           LYLTRFDSQRDEYWRTLCSSV
Sbjct: 181 LYLTRFDSQRDEYWRTLCSSV 201

[Close]

BLAST of Carg08171-RA vs. NCBI nr
Match: XP_023513291.1 (uncharacterized protein LOC111777802 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407.5 bits (1046), Expect = 2.6e-110
Identity = 197/201 (98.01%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MLSGGVGGGSVYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADF 60
           MLSGGVGGGSVYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADF
Sbjct: 1   MLSGGVGGGSVYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADF 60

Query: 61  LNIFDPERATSLAFLVLNELVEELRMRLRPVVFVGLSGASKACMCRVLQIIEGRCGSPLY 120
           LNIFDPERATSLAFLVLNELVEELRM+LRPVVFVGLSGASKACMCRVLQIIEGRCGSPLY
Sbjct: 61  LNIFDPERATSLAFLVLNELVEELRMKLRPVVFVGLSGASKACMCRVLQIIEGRCGSPLY 120

Query: 121 MAECQMIRACVSGHIYDSSPIELISDLGARFAIHPAIRKVPGSSQLISWLAKGVSSGLDA 180
           MAEC+MIRACVSGHIYDSSPIELISDLGARFAIHPA+ KVPGSSQLISWLAKGVSSGLDA
Sbjct: 121 MAECRMIRACVSGHIYDSSPIELISDLGARFAIHPAVLKVPGSSQLISWLAKGVSSGLDA 180

Query: 181 LYLTRFDSQRDEYWRTLCSSV 202
           LYLTRFDSQRDEYWRTLCSSV
Sbjct: 181 LYLTRFDSQRDEYWRTLCSSV 201

[Close]

BLAST of Carg08171-RA vs. NCBI nr
Match: XP_022984695.1 (uncharacterized protein LOC111482897 [Cucurbita maxima])

HSP 1 Score: 387.1 bits (993), Expect = 3.7e-104
Identity = 184/201 (91.54%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MLSGGVGGGSVYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADF 60
           ML GGVGGGSVYWGTRN+PR  RG+VV+FAWVSIQHRHLDKFV LYASLGWNSLVCYADF
Sbjct: 1   MLGGGVGGGSVYWGTRNQPRNSRGLVVIFAWVSIQHRHLDKFVNLYASLGWNSLVCYADF 60

Query: 61  LNIFDPERATSLAFLVLNELVEELRMRLRPVVFVGLSGASKACMCRVLQIIEGRCGSPLY 120
           LNIFDPERATSLAFLV+NELVEELR++LRP+VFV LSGASKACMCRVLQIIEGRCGSPLY
Sbjct: 61  LNIFDPERATSLAFLVINELVEELRLKLRPIVFVALSGASKACMCRVLQIIEGRCGSPLY 120

Query: 121 MAECQMIRACVSGHIYDSSPIELISDLGARFAIHPAIRKVPGSSQLISWLAKGVSSGLDA 180
           M ECQMIR CVSGHIYDSSP+ELISDLGARFAIHPAI K+PGSSQLISWLAKGVSSGLDA
Sbjct: 121 MTECQMIRTCVSGHIYDSSPVELISDLGARFAIHPAILKMPGSSQLISWLAKGVSSGLDA 180

Query: 181 LYLTRFDSQRDEYWRTLCSSV 202
           LYLTRFDSQRDEYWRTLCSSV
Sbjct: 181 LYLTRFDSQRDEYWRTLCSSV 201

[Close]

BLAST of Carg08171-RA vs. NCBI nr
Match: XP_022922960.1 (uncharacterized protein LOC111430786 [Cucurbita moschata])

HSP 1 Score: 384.8 bits (987), Expect = 1.8e-103
Identity = 183/201 (91.04%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MLSGGVGGGSVYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADF 60
           ML GGVGGGSVYWGTRN+PR  RG+VV+FAWVSIQHRHLDKFV LYASLGWNSLVCYADF
Sbjct: 1   MLGGGVGGGSVYWGTRNQPRNSRGLVVIFAWVSIQHRHLDKFVNLYASLGWNSLVCYADF 60

Query: 61  LNIFDPERATSLAFLVLNELVEELRMRLRPVVFVGLSGASKACMCRVLQIIEGRCGSPLY 120
           LNIFDPERATSLAFLV+NELVEELR++LRP+VFV LSGASKACMCRVLQIIEGRCGSPLY
Sbjct: 61  LNIFDPERATSLAFLVINELVEELRLKLRPIVFVALSGASKACMCRVLQIIEGRCGSPLY 120

Query: 121 MAECQMIRACVSGHIYDSSPIELISDLGARFAIHPAIRKVPGSSQLISWLAKGVSSGLDA 180
           M ECQMIR CVSGHIYDSSP+ELISDLGARFAIHPAI K+PGSSQLISWLAKGVSSGLDA
Sbjct: 121 MTECQMIRTCVSGHIYDSSPVELISDLGARFAIHPAILKMPGSSQLISWLAKGVSSGLDA 180

Query: 181 LYLTRFDSQRDEYWRTLCSSV 202
           LYLTRFDSQRDEYWRTLC SV
Sbjct: 181 LYLTRFDSQRDEYWRTLCFSV 201

[Close]

BLAST of Carg08171-RA vs. TAIR10
Match: AT2G15695.1 (Protein of unknown function DUF829, transmembrane 53)

HSP 1 Score: 233.0 bits (593), Expect = 1.6e-61
Identity = 111/206 (53.88%), Postives = 144/206 (69.90%), Query Frame = 0


Query: 6   VGGGSVYWGTRNEPRI----------CRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLV 65
           +GGG VYWG + +  +            GVVV+F W SI    L  FV LY+SLGWNSLV
Sbjct: 2   IGGGRVYWGKKLDKEMEDAAVVDGGGSNGVVVIFVWSSINENQLMNFVDLYSSLGWNSLV 61

Query: 66  CYADFLNIFDPERATSLAFLVLNELVEELRMRLRPVVFVGLSGASKACMCRVLQIIEGRC 125
           C ADFL    PE A SLAF +L+ELVEEL+ R  PV+F+  SGA KACM +VLQ+I   C
Sbjct: 62  CRADFLTAVYPEMALSLAFHLLSELVEELKSRPCPVIFLAFSGAPKACMYKVLQVIMDDC 121

Query: 126 GSPLYMAECQMIRACVSGHIYDSSPIELISDLGARFAIHPAIRKVPGSSQLISWLAKGVS 185
            + ++  + Q++R C+SGH+YDS P++  SDL  +FA+HP IR++ G S+L+SW+AKG+S
Sbjct: 122 EAQIHPDDSQLVRTCLSGHVYDSGPLDFTSDLNVKFALHPTIRRMSGPSRLVSWVAKGIS 181

Query: 186 SGLDALYLTRFDSQRDEYWRTLCSSV 202
           SGLD LYLTRF+SQR EYW+ L SSV
Sbjct: 182 SGLDGLYLTRFESQRSEYWQALYSSV 207

[Close]

BLAST of Carg08171-RA vs. TAIR10
Match: AT5G44250.1 (Protein of unknown function DUF829, transmembrane 53)

HSP 1 Score: 175.3 bits (443), Expect = 4.0e-44
Identity = 80/168 (47.62%), Postives = 117/168 (69.64%), Query Frame = 0


Query: 35  QHRHLDKFVQLYASLGWNSLVCYADFLNIFDPERATSLAFLVLNELVEELRMRLRPVVFV 94
           + R+L   V LY+SL W+SLVC++ FLN+F P++A  LA  V++ELV+EL+ +  P+VF 
Sbjct: 33  EERNLKNHVDLYSSLLWDSLVCHSQFLNMFLPDKAADLASNVVSELVKELKAKPVPLVFA 92

Query: 95  GLSGASKACMCRVLQIIEGRCGSPLYMAECQMIRACVSGHIYDSSPIELISDLGARFAIH 154
             SG   ACM +VLQI+EG C + L   +C+++R C+SG IYDS P++  SDLGAR A+H
Sbjct: 93  SFSGGPNACMYKVLQILEGTCETGLNPDDCRLVRNCISGFIYDSCPVDFTSDLGARLAVH 152

Query: 155 PAIRKVPGSSQLISWLAKGVSSGLDALYLTRFDSQRDEYWRTLCSSVV 203
           P   K+    +   W A G++S LD ++L RF+SQR EYW+TL S+++
Sbjct: 153 PTTLKMSSPPKPFVWAANGIASSLDYVFLNRFESQRAEYWQTLYSTII 200

[Close]

BLAST of Carg08171-RA vs. TrEMBL
Match: tr|A0A1S3C3Q9|A0A1S3C3Q9_CUCME (uncharacterized protein LOC103496148 OS=Cucumis melo OX=3656 GN=LOC103496148 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 3.5e-103
Identity = 183/201 (91.04%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MLSGGVGGGSVYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADF 60
           ML GGVGGGSVYWG RNEPR  RG+VVLFAWVSIQHRHLDKFV LYASLGWNSLVCYADF
Sbjct: 1   MLGGGVGGGSVYWGARNEPRNSRGLVVLFAWVSIQHRHLDKFVHLYASLGWNSLVCYADF 60

Query: 61  LNIFDPERATSLAFLVLNELVEELRMRLRPVVFVGLSGASKACMCRVLQIIEGRCGSPLY 120
           LNIFDPERATSLAFLV+NELVEELR++LRP+VFV LSGASKACMCRVLQIIEGRCGSPLY
Sbjct: 61  LNIFDPERATSLAFLVINELVEELRLKLRPIVFVALSGASKACMCRVLQIIEGRCGSPLY 120

Query: 121 MAECQMIRACVSGHIYDSSPIELISDLGARFAIHPAIRKVPGSSQLISWLAKGVSSGLDA 180
           M ECQMIR CVSGHIYDSSP+ELISDLG RFAIHP I K+PGSSQLISWLAKGVSSGLDA
Sbjct: 121 MNECQMIRTCVSGHIYDSSPVELISDLGVRFAIHPTILKMPGSSQLISWLAKGVSSGLDA 180

Query: 181 LYLTRFDSQRDEYWRTLCSSV 202
           LYLTRFDSQRDEYWRTLCSSV
Sbjct: 181 LYLTRFDSQRDEYWRTLCSSV 201

[Close]

BLAST of Carg08171-RA vs. TrEMBL
Match: tr|A0A0A0LBZ6|A0A0A0LBZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207950 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 8.7e-102
Identity = 180/201 (89.55%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MLSGGVGGGSVYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADF 60
           ML  GVGGGSVYWG RN+PR  RG+VVLF+WVSIQHRHLDKFV LYASLGWNSLVCYADF
Sbjct: 1   MLGAGVGGGSVYWGARNDPRNSRGLVVLFSWVSIQHRHLDKFVHLYASLGWNSLVCYADF 60

Query: 61  LNIFDPERATSLAFLVLNELVEELRMRLRPVVFVGLSGASKACMCRVLQIIEGRCGSPLY 120
           LNIFDPERATSLAFLV+NELVEELR++LRP+VFV LSGASKACMCRVLQIIEGRCGSPLY
Sbjct: 61  LNIFDPERATSLAFLVINELVEELRLKLRPIVFVALSGASKACMCRVLQIIEGRCGSPLY 120

Query: 121 MAECQMIRACVSGHIYDSSPIELISDLGARFAIHPAIRKVPGSSQLISWLAKGVSSGLDA 180
           M ECQMIR CVSGHIYDSSP+ELISDLG RFAIHP I K+PGSSQLISWLAKGVSSGLDA
Sbjct: 121 MNECQMIRTCVSGHIYDSSPVELISDLGVRFAIHPTILKMPGSSQLISWLAKGVSSGLDA 180

Query: 181 LYLTRFDSQRDEYWRTLCSSV 202
           LYLTRFDSQRDEYWRTLCSSV
Sbjct: 181 LYLTRFDSQRDEYWRTLCSSV 201

[Close]

BLAST of Carg08171-RA vs. TrEMBL
Match: tr|A0A2I4GDH9|A0A2I4GDH9_9ROSI (uncharacterized protein LOC109006952 OS=Juglans regia OX=51240 GN=LOC109006952 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 7.4e-69
Identity = 132/201 (65.67%), Postives = 157/201 (78.11%), Query Frame = 0


Query: 1   MLSGGVGGGSVYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADF 60
           M  GG  GG +YWG R E    RG+ V+FAW SIQ RHL  +V LYASLGWN LV +ADF
Sbjct: 1   MWGGGGVGGDIYWG-RKEETESRGITVIFAWASIQERHLKCYVDLYASLGWNCLVSHADF 60

Query: 61  LNIFDPERATSLAFLVLNELVEELRMRLRPVVFVGLSGASKACMCRVLQIIEGRCGSPLY 120
           LN F PERATSLAFLV+NELVEELR+R  P+VFV LSG+ KACM ++ Q+I+G CG   Y
Sbjct: 61  LNAFYPERATSLAFLVINELVEELRIRPCPIVFVALSGSPKACMYKIFQVIDGTCGE-RY 120

Query: 121 MAECQMIRACVSGHIYDSSPIELISDLGARFAIHPAIRKVPGSSQLISWLAKGVSSGLDA 180
             E Q+IR CVSGHIYDSSP++L SDLGARF +H  +R++PGSS++ SWLAKG++SGLDA
Sbjct: 121 PGEYQLIRNCVSGHIYDSSPVDLTSDLGARFTLHSPLRRMPGSSKIFSWLAKGIASGLDA 180

Query: 181 LYLTRFDSQRDEYWRTLCSSV 202
           LYLTRF+SQ  EYWR L SSV
Sbjct: 181 LYLTRFESQCIEYWRALYSSV 199

[Close]

BLAST of Carg08171-RA vs. TrEMBL
Match: tr|A0A2I4FVA1|A0A2I4FVA1_9ROSI (uncharacterized protein LOC109002331 OS=Juglans regia OX=51240 GN=LOC109002331 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.4e-67
Identity = 131/202 (64.85%), Postives = 159/202 (78.71%), Query Frame = 0


Query: 1   MLSGGVG-GGSVYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYAD 60
           M  GG G GG +YWG R E +  RG+ V+FAW SIQ + L  +V LYASLGWN LVC+AD
Sbjct: 1   MWGGGGGIGGDLYWG-RKEAQ-SRGIAVVFAWASIQEQLLKSYVDLYASLGWNCLVCHAD 60

Query: 61  FLNIFDPERATSLAFLVLNELVEELRMRLRPVVFVGLSGASKACMCRVLQIIEGRCGSPL 120
           FLN F PERA SLAF+VLNELVEELR+R  P+VFV LSG  KACM ++ Q+I+G CG  +
Sbjct: 61  FLNAFYPERAMSLAFVVLNELVEELRIRPCPIVFVALSGGPKACMYKIFQVIDGTCGE-M 120

Query: 121 YMAECQMIRACVSGHIYDSSPIELISDLGARFAIHPAIRKVPGSSQLISWLAKGVSSGLD 180
           Y  E Q++R C SGHIYDSSP++  SD GARF +HP+IRK+PGSS+L+SW+AKGV+SGLD
Sbjct: 121 YWGEYQLVRNCFSGHIYDSSPVDFTSDFGARFTLHPSIRKMPGSSKLVSWVAKGVASGLD 180

Query: 181 ALYLTRFDSQRDEYWRTLCSSV 202
           ALYLTRF+SQR EYW+ L SSV
Sbjct: 181 ALYLTRFESQRVEYWQALYSSV 199

[Close]

BLAST of Carg08171-RA vs. TrEMBL
Match: tr|A0A2P4LXV6|A0A2P4LXV6_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_39940 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.0e-66
Identity = 123/191 (64.40%), Postives = 150/191 (78.53%), Query Frame = 0


Query: 11  VYWGTRNEPRICRGVVVLFAWVSIQHRHLDKFVQLYASLGWNSLVCYADFLNIFDPERAT 70
           +YWG R E    RG+ V+FAW SIQ RHL  +V LYASL WNSLVC+ADFLN F PERA 
Sbjct: 16  IYWG-RKEKSESRGIAVIFAWASIQDRHLRTYVDLYASLRWNSLVCHADFLNAFYPERAM 75

Query: 71  SLAFLVLNELVEELRMRLRPVVFVGLSGASKACMCRVLQIIEGRCGSPLYMAECQMIRAC 130
           SLAF+VLNELVEELR++  P+VFV  SG  KACM ++ Q+I G C   +Y    Q++R C
Sbjct: 76  SLAFVVLNELVEELRIKPCPLVFVAFSGGPKACMYKLFQVINGTCEGQMYAGHYQLVRNC 135

Query: 131 VSGHIYDSSPIELISDLGARFAIHPAIRKVPGSSQLISWLAKGVSSGLDALYLTRFDSQR 190
           VSGHIYDSSP++  SDLGARF +HP+I K+PGSS+L+SW+AKG++SGLDALYLTRF+SQR
Sbjct: 136 VSGHIYDSSPLDFTSDLGARFGLHPSILKMPGSSKLVSWVAKGIASGLDALYLTRFESQR 195

Query: 191 DEYWRTLCSSV 202
            EYW+ L SSV
Sbjct: 196 VEYWQALYSSV 205

The following BLAST results are available for this feature:

BLAST of Carg08171-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942978.1	1.1e-111	99.50	uncharacterized protein LOC111447853 [Cucurbita moschata]	[more]
XP_022981161.1	2.6e-110	98.01	uncharacterized protein LOC111480388 [Cucurbita maxima]	[more]
XP_023513291.1	2.6e-110	98.01	uncharacterized protein LOC111777802 [Cucurbita pepo subsp. pepo]	[more]
XP_022984695.1	3.7e-104	91.54	uncharacterized protein LOC111482897 [Cucurbita maxima]	[more]
XP_022922960.1	1.8e-103	91.04	uncharacterized protein LOC111430786 [Cucurbita moschata]	[more]

BLAST of Carg08171-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G15695.1	1.6e-61	53.88	Protein of unknown function DUF829, transmembrane 53	[more]
AT5G44250.1	4.0e-44	47.62	Protein of unknown function DUF829, transmembrane 53	[more]

BLAST of Carg08171-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg08171-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C3Q9\|A0A1S3C3Q9_CUCME	3.5e-103	91.04	uncharacterized protein LOC103496148 OS=Cucumis melo OX=3656 GN=LOC103496148 PE=...	[more]
tr\|A0A0A0LBZ6\|A0A0A0LBZ6_CUCSA	8.7e-102	89.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207950 PE=4 SV=1	[more]
tr\|A0A2I4GDH9\|A0A2I4GDH9_9ROSI	7.4e-69	65.67	uncharacterized protein LOC109006952 OS=Juglans regia OX=51240 GN=LOC109006952 P...	[more]
tr\|A0A2I4FVA1\|A0A2I4FVA1_9ROSI	1.4e-67	64.85	uncharacterized protein LOC109002331 OS=Juglans regia OX=51240 GN=LOC109002331 P...	[more]
tr\|A0A2P4LXV6\|A0A2P4LXV6_QUESU	2.0e-66	64.40	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_39940 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008547	DUF829_TMEM53

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg08171	Carg08171	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08171-RA.three_prime_UTR.2	Carg08171-RA.three_prime_UTR.2	three_prime_UTR
Carg08171-RA.three_prime_UTR.1	Carg08171-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08171-RA.CDS.5	Carg08171-RA.CDS.5	CDS
Carg08171-RA.CDS.4	Carg08171-RA.CDS.4	CDS
Carg08171-RA.CDS.3	Carg08171-RA.CDS.3	CDS
Carg08171-RA.CDS.2	Carg08171-RA.CDS.2	CDS
Carg08171-RA.CDS.1	Carg08171-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08171-RA.five_prime_UTR.1	Carg08171-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08171-RA.exon.6	Carg08171-RA.exon.6	exon
Carg08171-RA.exon.5	Carg08171-RA.exon.5	exon
Carg08171-RA.exon.4	Carg08171-RA.exon.4	exon
Carg08171-RA.exon.3	Carg08171-RA.exon.3	exon
Carg08171-RA.exon.2	Carg08171-RA.exon.2	exon
Carg08171-RA.exon.1	Carg08171-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg08171-RA	Carg08171-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008547	Protein of unknown function DUF829, TMEM53	PFAM	PF05705	DUF829	coord: 131..201 e-value: 3.7E-8 score: 33.5
IPR008547	Protein of unknown function DUF829, TMEM53	PANTHER	PTHR12265	UNCHARACTERIZED	coord: 6..201
None	No IPR available	PANTHER	PTHR12265:SF9	SUBFAMILY NOT NAMED	coord: 6..201