Carg08058-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08058-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transcription factor-like protein DPB
Location	Cucurbita_argyrosperma_scaffold_050 : 465818 .. 470314 (-)
Sequence length	819

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCACACGAACCCAGCAACCCTGCCACGACGACGACGACGACGACCTCCCAGGCGGCCCTGGCCCTGCTGCCACCACAATTTCCGGTCAGTCCGTTTCCATGAGTGGTAGTGTCGGTTCTCCTTCTAACCGAAGCGAGCAAACCATGGCCACGCCTGCTAGCGACAACACTTTTCTTCGATTGAACAACCTCGACATCCATGGCGATGAGGCGGGCTCGCAACCTCCTACTGCGTGAGTTTATTTTCTTATTTTATGTTGTGATTTAGCTCAAATGTTGCCTTGCTTGGGTGTTTGAACAATGTTGAGTGATGTTTTGATTGAGTCCTGTTGATTAAGAGACTGTGAATTTGTGGTTTTAGCTTTGGTTGTTCGAATTGAACTGTGCGTTTGATTTGATCTGTTGAATTGGATGTTGTTTTGAGATAGTAACGTGAAGAAAAAGAGGGGTCAGCGTGCTGTTGGAGGGGACAAGAGTGGAAGAGGGCTTCGCCAATTTAGCATGAAAGGTGTTTGACTTCACCCATTTTCGTTATTTCTTCCTTCATTGCGTCCGATTCGACTCCGCCCGTGGCAGGGCATGCATTGAACCAGTGGATCGTGATGCATAATAGATTTGTTCTTATTTGTTTTGATTGTTTGATTGTTTTACTTGTTCCCATTGCTTGCAGTTTGTGAGAAAGTGGAGAGTAAGGGAAGAACGACGTACAACGAGGTAGGTTATTTCTTAGCATCGTTGATTTGTAAGAGAACGTAATCGAAACGTCCTTAATTATGATGTGAGATCCAACGAACGGTTGGAGAGGGAAACGAAGCATTCCTTACAAGGATGTGGAAACCTTTCCCTAATGGATGCGTTTTAAAATCTTGAGGGGAAGTTCGAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTCCAGCTTGGGCTGTTACATATATATACCCTATGATGCACTGGTGCATCAAAATGTTTGGTTTCACTTTTCAGTCTTGTGATCTCAGGTAGCAGACGAACTCGTTGCAGAGTTTGCTGATCCTGGCAACAGTCTTGCGACACCGGATCAGGTTTCAAATGCTTCATATTTTTGCTAGTTTTGTTATGCGAGAGGATAGGTGTCATTATATCTTTTACTCTGTTTATGACAGCAACAGTATGATGAAAAAAACATCAGGCGAAGGGTGTATGACGCGCTGAATGTTCTCATGGCAATGGATATCATATCAAAAGATAAAAAAGAGATACAATGGAAGGGTCTGCCACGTACAAGCCTGAACGATATCGAAGAACTAAAGGTTTCACTGCAGTCTGCATTTCTTCTATCATGCATCGAGCATATAATTTACCTTGTTATTGAACGATGCAGGCAGAGCGTCTTGGGCTTAGAAATAGGATTGAAAAGAAAGCGGCGTACTTGCAAGAGCTGGAGGAGCAGGTACGAATAGCTATCAGCATGGTGTTATCATCTTACAGTCTTTGGATTATGTGTATGATACGGGCGAGTTCTAAGACAATTCCATCCTTTTTACTTGGCTGATTCGGAACCTTTTCGCTTATCCCCATGTCAACTGGGTGGCCACCTGATCTAATTGAGTTATGTTAAATCCAAAAATAAAGTTATTGATATGGCAGTGCCATTATTTTATGTACCCTTTTTGTACTTAGCTTATTTACTGCATTTAAGTGATAAGAATGCAGCTCTAATGGTGTCTGGCTATCAGTATGTAGGCCTTCAGAACCTAATTCAGCGAAACGAACAGTTATTCAGTTCTGAGAATGCACCCAGTGGTGGCGTGTCTTTACCTTTCATCCTGGTGCAGGTATACGTTCTTCCCATTTTATTCGATGTAGTATGGCCTTATCTATTCTTCGGAACCTTATGATAAGCGTGATGTCTTTTTGATTGAACAAGATTTTGTCTAAGATTGTGAGATCCCACATCAGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAACACATACGTTTTAAAAACCTTGAGCGGAAGCTCGAAAGGGAAAGCCAAAGAGAACAATATTTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATTAGCGCCAGACACTGGGCGATGTGCTAGCAAGGAGGCTGAGTCCTGAAGGGGGGTGGACACTAGGCGGTGTGCACACTGGGCCCTAAAGGGAGGTGGATCGCTGGGCCCTGAAAGGGGGTGGATCGTTAGATCCCACATCGGTTGTAGAGGAGAATGAAATATTTTTTATAAGAGCGTGGAAATCTCTCCCTAACACACATTTTAAAAACCTTGAGAGGAAGCCTGAAAGGGAAAGCCCAAAGAGGATAGTATCTGCTAGCGGTGACTTGTCATAGTTGCTATCTATTGTTAAATCATTTAGACGGTAGATGCATTTGAAGCTTGTGCGCTCTTGTACGGCGTGTCTGTTACATGCTCATATTTATTTCTTCTTTTTCCTAAATGCAAGGAACTCCGGACACGTCTCGTATCTGTATAGAATTTCCGTTCTTCTCCTTGGGTTTCAAATTGATGGGCTTTCCTCTACCCAACATCCTCCTCACCTCATCCCCTTCAGCCTACTTGTGGGAAAAATAAAGACAAAACAACCACCTTAGTGTTCTTGTACAAAGTGTTCATAGTTCTTTATTTGTTCTAATCTTTACAAAATGTTGTTGGCCGTTGAATGTTTCAACACTTTTCCCTTCTTAGATTTTAAGATAATGAAGGTGGATGACCATTTACCTGAACTTATATTGAAGTTTCGGTCAATTTAGCAGTTAAAGGGCAAGCCATAAACTCATTTTGAGATCCCACGTCGGTTGGGGAGGAGAACGAAGCATTCTTAATAAGGGTGTGTAAACTTCTCCCTAGCAGACACATTTTAAAACCTTAAGGTGAAGCCCGAAAGGGAAAGCCCATAGAGGACAATATCTGCTAGCGGTGGCCTTGGGTTGTTACACTCGTTCCTTTGTAGTCAAGTGTTGAAGTCGTGTGGTCACCTGTATTATATATCCTAGCCCTACTCGTGCGATTAGACGTAGCTTTGGGCTATATTCATAGATTGAAGATTTTGGGAAGATCATTCTGAGGGCCCTAGCTTTCTTTGAAGCCTATCCAAAACTTAGCGACCTCACTAACGGGCAGGTTTGATTCGAATTGCTGGAATCGCGAGTCGTCATCCAGCAATTTGGGAGTATGGAAGTTAGATGCATTGGGAAAATTCATTTGGAAATCTCTCTCTATGTGTACCAAAATGTTCTGGTTCTCGGGTTCGTAAGGTAGATGGGATCTGCACAATTTGGAAGCATTTATATCCTAAGAAGATAATAATGTTTGCTTGGTCTCTTCTGTTGGGGAAATACAAACCCCAAAGATACTATTTAATAAAGAAAAAACGTCCCGACTCTTTCCTTTCTTCAGGTTGGACGGATGTGTAAAAGTGAAGACGATCCAATGGAACCGTCTCTTCTTCTGGTGTTAGCATCGGTTCATTAAGGAACGTGCTTCATAATCCTTTTTTCTTTTAAAGAAACTGAACTTTCGTCGAACAACCGAAAGAACACAAGGGCATACAAAAAACAAGCCCGCCAAAAACGAACTACAAAAAGAGACTCCAATTCAAAAGAACAAGACCAAGGCCATAATTACAGGAACACCAAGTGACCAACGCCCGGAAGCGAAAAACATAACACGCTCCCAAATCTGTCGTTCCTCCCAAGCAAGATATGATACCTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGTAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAAGACAATATTTGCTAGCGTGGATCTGAGCCGTTATAAATGGTATCAGAGCCAAACACCGGACAATGTGCCAGCCTGCTCGCTGTTCCATGAAGGGGGTAGACACGAGGCGGTGTGCCAGTAAGGACAATGGGCCCCAAAGGGGAGTGGATTTGGGAGCGGTCCCACATCGACTGGAGGAAGGAAAGAGTTTCCGGGCCCCGAAGGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGTGGACACGTTTTAAAGCCCAACATCTGTCGACCTTGAGGGGAAGCTCGAAAGGGACAATATCTACTAGCGGTGGATCTGGGCCGTTACAATACCCCACAAAAAGTCGTAAGCTAGAAGTTTATGCTGATAGGGATGTACATAGCAGCAGTTTAACAAAAATTCTTTGATATCGTTTCTCGTCTAGAAAAGTATCGACGATGCAGGGGAGGGTTCTAGCATGTCAGGCATGTATCAACCACCCCAGATCCCTCTTCCTTCAATGTCTAACACGCCCGTTAGAACTCCAACCTCGCCACCGCTTCCTGGAATTATAAAAGCTCGTGTTAAACACGAACATTGA

mRNA sequence

ATGGGCACACGAACCCAGCAACCCTGCCACGACGACGACGACGACGACCTCCCAGGCGGCCCTGGCCCTGCTGCCACCACAATTTCCGGTCAGTCCGTTTCCATGAGTGGTAGTGTCGGTTCTCCTTCTAACCGAAGCGAGCAAACCATGGCCACGCCTGCTAGCGACAACACTTTTCTTCGATTGAACAACCTCGACATCCATGGCGATGAGGCGGGCTCGCAACCTCCTACTGCTAACGTGAAGAAAAAGAGGGGTCAGCGTGCTGTTGGAGGGGACAAGAGTGGAAGAGGGCTTCGCCAATTTAGCATGAAAGGTCAACAGTATGATGAAAAAAACATCAGGCGAAGGGTGTATGACGCGCTGAATGTTCTCATGGCAATGGATATCATATCAAAAGATAAAAAAGAGATACAATGGAAGGGTCTGCCACGTACAAGCCTGAACGATATCGAAGAACTAAAGGCAGAGCGTCTTGGGCTTAGAAATAGGATTGAAAAGAAAGCGGCGTACTTGCAAGAGCTGGAGGAGCAGAATGCAGCTCTAATGGTGTCTGGCTATCAGTATGTAGGCCTTCAGAACCTAATTCAGCGAAACGAACAGTTATTCAGTTCTGAGAATGCACCCAGTGGTGGCGTGTCTTTACCTTTCATCCTGGTGCAGAAAAGTATCGACGATGCAGGGGAGGGTTCTAGCATGTCAGGCATGTATCAACCACCCCAGATCCCTCTTCCTTCAATGTCTAACACGCCCGTTAGAACTCCAACCTCGCCACCGCTTCCTGGAATTATAAAAGCTCGTGTTAAACACGAACATTGA

Coding sequence (CDS)

ATGGGCACACGAACCCAGCAACCCTGCCACGACGACGACGACGACGACCTCCCAGGCGGCCCTGGCCCTGCTGCCACCACAATTTCCGGTCAGTCCGTTTCCATGAGTGGTAGTGTCGGTTCTCCTTCTAACCGAAGCGAGCAAACCATGGCCACGCCTGCTAGCGACAACACTTTTCTTCGATTGAACAACCTCGACATCCATGGCGATGAGGCGGGCTCGCAACCTCCTACTGCTAACGTGAAGAAAAAGAGGGGTCAGCGTGCTGTTGGAGGGGACAAGAGTGGAAGAGGGCTTCGCCAATTTAGCATGAAAGGTCAACAGTATGATGAAAAAAACATCAGGCGAAGGGTGTATGACGCGCTGAATGTTCTCATGGCAATGGATATCATATCAAAAGATAAAAAAGAGATACAATGGAAGGGTCTGCCACGTACAAGCCTGAACGATATCGAAGAACTAAAGGCAGAGCGTCTTGGGCTTAGAAATAGGATTGAAAAGAAAGCGGCGTACTTGCAAGAGCTGGAGGAGCAGAATGCAGCTCTAATGGTGTCTGGCTATCAGTATGTAGGCCTTCAGAACCTAATTCAGCGAAACGAACAGTTATTCAGTTCTGAGAATGCACCCAGTGGTGGCGTGTCTTTACCTTTCATCCTGGTGCAGAAAAGTATCGACGATGCAGGGGAGGGTTCTAGCATGTCAGGCATGTATCAACCACCCCAGATCCCTCTTCCTTCAATGTCTAACACGCCCGTTAGAACTCCAACCTCGCCACCGCTTCCTGGAATTATAAAAGCTCGTGTTAAACACGAACATTGA

Protein sequence

MGTRTQQPCHDDDDDDLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFLRLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMKGQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQLFSSENAPSGGVSLPFILVQKSIDDAGEGSSMSGMYQPPQIPLPSMSNTPVRTPTSPPLPGIIKARVKHEH

Homology

[Close]

BLAST of Carg08058-RA vs. NCBI nr
Match: XP_022942389.1 (transcription factor-like protein DPB isoform X1 [Cucurbita moschata] >XP_023536263.1 transcription factor-like protein DPB isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 440.3 bits (1131), Expect = 4.9e-120
Identity = 259/359 (72.14%), Postives = 259/359 (72.14%), Query Frame = 0


Query: 1   MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL 60
           MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL
Sbjct: 1   MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL 60

Query: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK--------------- 120
           RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK               
Sbjct: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNE 120

Query: 121 --------------------GQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR 180
                                QQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR
Sbjct: 121 VADELVAEFADPGNSLATPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR 180

Query: 181 TSLNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQLFSS 240
           TSLNDIEELKAERLGLRNRIEKKAAYLQELEE          QYVGLQNLIQRNEQLFSS
Sbjct: 181 TSLNDIEELKAERLGLRNRIEKKAAYLQELEE----------QYVGLQNLIQRNEQLFSS 240

Query: 241 ENAPSGGVSLPFILVQ---------------------------------------KSID- 273
           ENAPSGGVSLPFILVQ                                       K  D 
Sbjct: 241 ENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCDR 300

[Close]

BLAST of Carg08058-RA vs. NCBI nr
Match: XP_022966582.1 (transcription factor-like protein DPB isoform X1 [Cucurbita maxima])

HSP 1 Score: 440.3 bits (1131), Expect = 4.9e-120
Identity = 259/359 (72.14%), Postives = 259/359 (72.14%), Query Frame = 0


Query: 1   MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL 60
           MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL
Sbjct: 1   MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL 60

Query: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK--------------- 120
           RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK               
Sbjct: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNE 120

Query: 121 --------------------GQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR 180
                                QQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR
Sbjct: 121 VADELVAEFSDPGNSLATPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR 180

Query: 181 TSLNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQLFSS 240
           TSLNDIEELKAERLGLRNRIEKKAAYLQELEE          QYVGLQNLIQRNEQLFSS
Sbjct: 181 TSLNDIEELKAERLGLRNRIEKKAAYLQELEE----------QYVGLQNLIQRNEQLFSS 240

Query: 241 ENAPSGGVSLPFILVQ---------------------------------------KSID- 273
           ENAPSGGVSLPFILVQ                                       K  D 
Sbjct: 241 ENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCDR 300

[Close]

BLAST of Carg08058-RA vs. NCBI nr
Match: XP_022942391.1 (transcription factor-like protein DPB isoform X2 [Cucurbita moschata] >XP_023536267.1 transcription factor-like protein DPB isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.1 bits (1128), Expect = 1.1e-119
Identity = 258/357 (72.27%), Postives = 258/357 (72.27%), Query Frame = 0


Query: 1   MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL 60
           MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL
Sbjct: 1   MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL 60

Query: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK--------------- 120
           RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK               
Sbjct: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNE 120

Query: 121 ------------------GQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTS 180
                               QYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTS
Sbjct: 121 VADELVAEFADPGNSLATPDQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTS 180

Query: 181 LNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQLFSSEN 240
           LNDIEELKAERLGLRNRIEKKAAYLQELEE          QYVGLQNLIQRNEQLFSSEN
Sbjct: 181 LNDIEELKAERLGLRNRIEKKAAYLQELEE----------QYVGLQNLIQRNEQLFSSEN 240

Query: 241 APSGGVSLPFILVQ---------------------------------------KSID--- 273
           APSGGVSLPFILVQ                                       K  D   
Sbjct: 241 APSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCDRPQ 300

[Close]

BLAST of Carg08058-RA vs. NCBI nr
Match: XP_022966661.1 (transcription factor-like protein DPB isoform X2 [Cucurbita maxima])

HSP 1 Score: 439.1 bits (1128), Expect = 1.1e-119
Identity = 258/357 (72.27%), Postives = 258/357 (72.27%), Query Frame = 0


Query: 1   MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL 60
           MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL
Sbjct: 1   MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL 60

Query: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK--------------- 120
           RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK               
Sbjct: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNE 120

Query: 121 ------------------GQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTS 180
                               QYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTS
Sbjct: 121 VADELVAEFSDPGNSLATPDQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTS 180

Query: 181 LNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQLFSSEN 240
           LNDIEELKAERLGLRNRIEKKAAYLQELEE          QYVGLQNLIQRNEQLFSSEN
Sbjct: 181 LNDIEELKAERLGLRNRIEKKAAYLQELEE----------QYVGLQNLIQRNEQLFSSEN 240

Query: 241 APSGGVSLPFILVQ---------------------------------------KSID--- 273
           APSGGVSLPFILVQ                                       K  D   
Sbjct: 241 APSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCDRPQ 300

[Close]

BLAST of Carg08058-RA vs. NCBI nr
Match: XP_022141105.1 (transcription factor-like protein DPB [Momordica charantia])

HSP 1 Score: 420.2 bits (1079), Expect = 5.2e-114
Identity = 248/359 (69.08%), Postives = 250/359 (69.64%), Query Frame = 0


Query: 1   MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL 60
           MGTRTQQPC +D    LPGGPG  ATTISGQSVSMSGSVGSPS+RSEQTMATPASDNTFL
Sbjct: 1   MGTRTQQPCREDDDDDLPGGPG--ATTISGQSVSMSGSVGSPSSRSEQTMATPASDNTFL 60

Query: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK--------------- 120
           RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK               
Sbjct: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNE 120

Query: 121 --------------------GQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR 180
                                QQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR
Sbjct: 121 VADELVAEFADPGNSVASPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR 180

Query: 181 TSLNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQLFSS 240
           TSLNDIEELKAERLGLRNRIEKKAAYLQELEE          QYVGLQNLIQRNEQLFSS
Sbjct: 181 TSLNDIEELKAERLGLRNRIEKKAAYLQELEE----------QYVGLQNLIQRNEQLFSS 240

Query: 241 ENAPSGGVSLPFILVQ---------------------------------------KSID- 273
           ENAPSGGVSLPFILVQ                                       K  D 
Sbjct: 241 ENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCDR 300

[Close]

BLAST of Carg08058-RA vs. TAIR10
Match: AT5G03415.1 (Transcription factor DP)

HSP 1 Score: 225.3 bits (573), Expect = 4.5e-59
Identity = 131/199 (65.83%), Postives = 138/199 (69.35%), Query Frame = 0


Query: 58  TFLRLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK------------ 117
           TF RLNNLDI GD+AGSQ  +   KKKRGQRA G DK+GRGLRQFSMK            
Sbjct: 63  TFQRLNNLDIQGDDAGSQGASGVKKKKRGQRAAGPDKTGRGLRQFSMKVCEKVESKGRTT 122

Query: 118 -----------------------GQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKG 177
                                   QQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQW+G
Sbjct: 123 YNEVADELVAEFALPNNDGTSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWRG 182

Query: 178 LPRTSLNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQL 222
           LPRTSL+DIEELK ERL LRNRIEKK AY QELEE          QYVGLQNLIQRNE L
Sbjct: 183 LPRTSLSDIEELKNERLSLRNRIEKKTAYSQELEE----------QYVGLQNLIQRNEHL 242

[Close]

BLAST of Carg08058-RA vs. TAIR10
Match: AT5G02470.1 (Transcription factor DP)

HSP 1 Score: 111.3 bits (277), Expect = 9.4e-25
Identity = 55/114 (48.25%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 108 QYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEK 167
           +Y+EKNIRRRVYDALNV MA+DII++DKKEI+WKGLP T   D+EE+K +R  + + ++K
Sbjct: 99  EYNEKNIRRRVYDALNVFMALDIIARDKKEIRWKGLPITCKKDVEEVKMDRNKVMSSVQK 158

Query: 168 KAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQLFSSENAPSGGVSLPFILVQ 222
           KAA+L+EL E+ ++          L++L+ RN+++      P+ G +LPFIL++
Sbjct: 159 KAAFLKELREKVSS----------LESLMSRNQEMVVKTQGPAEGFTLPFILLE 202

[Close]

BLAST of Carg08058-RA vs. Swiss-Prot
Match: sp|Q9FNY2|DPB_ARATH (Transcription factor-like protein DPB OS=Arabidopsis thaliana OX=3702 GN=DPB PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 8.1e-58
Identity = 131/199 (65.83%), Postives = 138/199 (69.35%), Query Frame = 0


Query: 58  TFLRLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK------------ 117
           TF RLNNLDI GD+AGSQ  +   KKKRGQRA G DK+GRGLRQFSMK            
Sbjct: 63  TFQRLNNLDIQGDDAGSQGASGVKKKKRGQRAAGPDKTGRGLRQFSMKVCEKVESKGRTT 122

Query: 118 -----------------------GQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKG 177
                                   QQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQW+G
Sbjct: 123 YNEVADELVAEFALPNNDGTSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWRG 182

Query: 178 LPRTSLNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQL 222
           LPRTSL+DIEELK ERL LRNRIEKK AY QELEE          QYVGLQNLIQRNE L
Sbjct: 183 LPRTSLSDIEELKNERLSLRNRIEKKTAYSQELEE----------QYVGLQNLIQRNEHL 242

[Close]

BLAST of Carg08058-RA vs. Swiss-Prot
Match: sp|Q9FNY3|DPA_ARATH (Transcription factor-like protein DPA OS=Arabidopsis thaliana OX=3702 GN=DPA PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.7e-23
Identity = 55/114 (48.25%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 108 QYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEK 167
           +Y+EKNIRRRVYDALNV MA+DII++DKKEI+WKGLP T   D+EE+K +R  + + ++K
Sbjct: 99  EYNEKNIRRRVYDALNVFMALDIIARDKKEIRWKGLPITCKKDVEEVKMDRNKVMSSVQK 158

Query: 168 KAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQLFSSENAPSGGVSLPFILVQ 222
           KAA+L+EL E+ ++          L++L+ RN+++      P+ G +LPFIL++
Sbjct: 159 KAAFLKELREKVSS----------LESLMSRNQEMVVKTQGPAEGFTLPFILLE 202

[Close]

BLAST of Carg08058-RA vs. Swiss-Prot
Match: sp|Q14186|TFDP1_HUMAN (Transcription factor Dp-1 OS=Homo sapiens OX=9606 GN=TFDP1 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.9e-21
Identity = 77/212 (36.32%), Postives = 102/212 (48.11%), Query Frame = 0


Query: 49  TMATPASDNTFLRLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK--- 108
           T   PA+ NT +  +        A    P+ +     G+R   G+K+G+GLR FSMK   
Sbjct: 66  TPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFSMKVCE 125

Query: 109 -------------------------------GQQYDEKNIRRRVYDALNVLMAMDIISKD 168
                                             YD+KNIRRRVYDALNVLMAM+IISK+
Sbjct: 126 KVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKE 185

Query: 169 KKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQN 224
           KKEI+W GLP  S  + + L+ ER     RI++K + LQEL            Q +  +N
Sbjct: 186 KKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELI----------LQQIAFKN 245

[Close]

BLAST of Carg08058-RA vs. Swiss-Prot
Match: sp|Q17QZ4|TFDP1_BOVIN (Transcription factor Dp-1 OS=Bos taurus OX=9913 GN=TFDP1 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.8e-20
Identity = 70/175 (40.00%), Postives = 90/175 (51.43%), Query Frame = 0


Query: 86  GQRAVGGDKSGRGLRQFSMK----------------------------------GQQYDE 145
           G+R   G+K+G+GLR FSMK                                     YD+
Sbjct: 103 GKRNRKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSAADSHILPSESAYDQ 162

Query: 146 KNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKAAY 205
           KNIRRRVYDALNVLMAM+IISK+KKEI+W GLP  S  + + L+ ER     RI++K + 
Sbjct: 163 KNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQSLEVERQRRLERIKQKQSQ 222

Query: 206 LQELEEQNAALMVSGYQYVGLQNLIQRN---EQLFSSENAPSGGVSLPFILVQKS 224
           LQEL            Q +  +NL+QRN   EQ  S    P+  + LPFI+V  S
Sbjct: 223 LQELI----------LQQIAFKNLVQRNRQVEQQASRPPPPNSVIHLPFIIVNTS 267

[Close]

BLAST of Carg08058-RA vs. Swiss-Prot
Match: sp|Q14188|TFDP2_HUMAN (Transcription factor Dp-2 OS=Homo sapiens OX=9606 GN=TFDP2 PE=1 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 3.0e-20
Identity = 67/173 (38.73%), Postives = 88/173 (50.87%), Query Frame = 0


Query: 87  QRAVGGDKSGRGLRQFSMK---------------------------------GQQYDEKN 146
           +R+  GDK+G+GLR FSMK                                    YD+KN
Sbjct: 120 KRSKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAADSAYDQKN 179

Query: 147 IRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKAERLGLRNRIEKKAAYLQ 206
           IRRRVYDALNVLMAM+IISK+KKEI+W GLP  S  + + L+ E+     RI++K A LQ
Sbjct: 180 IRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQ 239

Query: 207 ELEEQNAALMVSGYQYVGLQNLIQRNEQLFSSENAP---SGGVSLPFILVQKS 224
           EL            Q +  +NL+QRN Q       P   +  + LPFI++  S
Sbjct: 240 ELL----------LQQIAFKNLVQRNRQNEQQNQGPPALNSTIQLPFIIINTS 282

[Close]

BLAST of Carg08058-RA vs. TrEMBL
Match: tr|A0A1S3C242|A0A1S3C242_CUCME (transcription factor-like protein DPB isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495774 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 3.0e-110
Identity = 239/359 (66.57%), Postives = 245/359 (68.25%), Query Frame = 0


Query: 1   MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL 60
           MGTRTQQP  +D    LP GPG  ATTISGQSVSMSGSVGSPS+RSEQTMATPASDNTFL
Sbjct: 1   MGTRTQQPSREDDDDDLPSGPG--ATTISGQSVSMSGSVGSPSSRSEQTMATPASDNTFL 60

Query: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK--------------- 120
           RLNNLDIHGDEAGSQ PTANVKKKRGQRAVGGDKSGRGLRQFSMK               
Sbjct: 61  RLNNLDIHGDEAGSQGPTANVKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNE 120

Query: 121 --------------------GQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR 180
                                QQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR
Sbjct: 121 VADELVAEFADPGNSVASPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR 180

Query: 181 TSLNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQLFSS 240
           TS+NDIEELKAERLGLRNRIEKKAAYLQELEE          QYVGLQNLIQRNEQLFSS
Sbjct: 181 TSVNDIEELKAERLGLRNRIEKKAAYLQELEE----------QYVGLQNLIQRNEQLFSS 240

Query: 241 ENAPSGGVSLPFILV--------------------------------------------- 273
           ENAPSGGVSLPFILV                                             
Sbjct: 241 ENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCNR 300

[Close]

BLAST of Carg08058-RA vs. TrEMBL
Match: tr|A0A1S3C1D5|A0A1S3C1D5_CUCME (transcription factor-like protein DPB isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495774 PE=3 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 3.9e-110
Identity = 239/360 (66.39%), Postives = 245/360 (68.06%), Query Frame = 0


Query: 1   MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL 60
           MGTRTQQP  +D    LP GPG  ATTISGQSVSMSGSVGSPS+RSEQTMATPASDNTFL
Sbjct: 1   MGTRTQQPSREDDDDDLPSGPG--ATTISGQSVSMSGSVGSPSSRSEQTMATPASDNTFL 60

Query: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK--------------- 120
           RLNNLDIHGDEAGSQ PTANVKKKRGQRAVGGDKSGRGLRQFSMK               
Sbjct: 61  RLNNLDIHGDEAGSQGPTANVKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNE 120

Query: 121 ---------------------GQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLP 180
                                 QQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLP
Sbjct: 121 VADELVAEFADPGNSVASPDQQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLP 180

Query: 181 RTSLNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQLFS 240
           RTS+NDIEELKAERLGLRNRIEKKAAYLQELEE          QYVGLQNLIQRNEQLFS
Sbjct: 181 RTSVNDIEELKAERLGLRNRIEKKAAYLQELEE----------QYVGLQNLIQRNEQLFS 240

Query: 241 SENAPSGGVSLPFILV-------------------------------------------- 273
           SENAPSGGVSLPFILV                                            
Sbjct: 241 SENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCN 300

[Close]

BLAST of Carg08058-RA vs. TrEMBL
Match: tr|A0A0A0KZ86|A0A0A0KZ86_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G106850 PE=3 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 3.9e-110
Identity = 239/360 (66.39%), Postives = 245/360 (68.06%), Query Frame = 0


Query: 1   MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL 60
           MGTRTQQP  +D    LP GPG  ATTISGQSVSMSGSVGSPS+RSEQTMATPASDNTFL
Sbjct: 1   MGTRTQQPSREDDDDDLPSGPG--ATTISGQSVSMSGSVGSPSSRSEQTMATPASDNTFL 60

Query: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK--------------- 120
           RLNNLDIHGDEAGSQ PTANVKKKRGQRAVGGDKSGRGLRQFSMK               
Sbjct: 61  RLNNLDIHGDEAGSQGPTANVKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNE 120

Query: 121 ---------------------GQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLP 180
                                 QQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLP
Sbjct: 121 VADELVAEFADPGNSVASPDQQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLP 180

Query: 181 RTSLNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQLFS 240
           RTS+NDIEELKAERLGLRNRIEKKAAYLQELEE          QYVGLQNLIQRNEQLF+
Sbjct: 181 RTSVNDIEELKAERLGLRNRIEKKAAYLQELEE----------QYVGLQNLIQRNEQLFN 240

Query: 241 SENAPSGGVSLPFILV-------------------------------------------- 273
           SENAPSGGVSLPFILV                                            
Sbjct: 241 SENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCN 300

[Close]

BLAST of Carg08058-RA vs. TrEMBL
Match: tr|A0A2I4ECM4|A0A2I4ECM4_9ROSI (transcription factor-like protein DPB isoform X1 OS=Juglans regia OX=51240 GN=LOC108988357 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.5e-88
Identity = 209/359 (58.22%), Postives = 226/359 (62.95%), Query Frame = 0


Query: 1   MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL 60
           MGTR Q    +D        PG  A +ISGQSVS S S+GSPS+RSEQTMATPASD+T  
Sbjct: 1   MGTRNQHLSREDEE---EDPPGRGAVSISGQSVSTSRSIGSPSSRSEQTMATPASDSTLF 60

Query: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK--------------- 120
           RLN+LDI GD+AGSQ   A+ KKKRGQRAVGGDKSGRGLRQFSMK               
Sbjct: 61  RLNHLDIQGDDAGSQGAVASKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNE 120

Query: 121 --------------------GQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR 180
                                QQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR
Sbjct: 121 VADELVAEFADPGNSVTSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR 180

Query: 181 TSLNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQLFSS 240
           TSLNDIEELK ERLGLRNRIEKKAAYLQELEE          Q++GLQNLIQRNEQL+SS
Sbjct: 181 TSLNDIEELKTERLGLRNRIEKKAAYLQELEE----------QFIGLQNLIQRNEQLYSS 240

Query: 241 ENAPSGGVSLPFILVQ-------------------------------------------- 273
            NAPSGGV+LPFILVQ                                            
Sbjct: 241 GNAPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCER 300

[Close]

BLAST of Carg08058-RA vs. TrEMBL
Match: tr|A0A151SD62|A0A151SD62_CAJCA (Transcription factor Dp-1 OS=Cajanus cajan OX=3821 GN=KK1_025446 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 4.2e-88
Identity = 208/358 (58.10%), Postives = 227/358 (63.41%), Query Frame = 0


Query: 1   MGTRTQQPCHDDXXXXLPGGPGPAATTISGQSVSMSGSVGSPSNRSEQTMATPASDNTFL 60
           MGT+ QQ   ++    LPG      TTISGQS+S S SVGSPS+RSEQTMATPASDNTFL
Sbjct: 1   MGTQPQQTFREEEEEELPG----RGTTISGQSMSTSRSVGSPSSRSEQTMATPASDNTFL 60

Query: 61  RLNNLDIHGDEAGSQPPTANVKKKRGQRAVGGDKSGRGLRQFSMK--------------- 120
           RLN+LDIHGD+AGSQ   A+ KKKRGQRAVGGDKSGRGLRQFSMK               
Sbjct: 61  RLNHLDIHGDDAGSQGAVASKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNE 120

Query: 121 --------------------GQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR 180
                                QQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR
Sbjct: 121 VADELVAEFADPSNGVSTPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPR 180

Query: 181 TSLNDIEELKAERLGLRNRIEKKAAYLQELEEQNAALMVSGYQYVGLQNLIQRNEQLFSS 240
           TSL+DIEELK ERLGLRNRIEKKAAYLQELEE          QYVGLQ LIQRNEQL+SS
Sbjct: 181 TSLSDIEELKTERLGLRNRIEKKAAYLQELEE----------QYVGLQKLIQRNEQLYSS 240

Query: 241 ENAPSGGVSLPFILVQ-------------------------------------------- 273
            NAP+GGVSLPFILVQ                                            
Sbjct: 241 GNAPNGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCER 300

The following BLAST results are available for this feature:

BLAST of Carg08058-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942389.1	4.9e-120	72.14	transcription factor-like protein DPB isoform X1 [Cucurbita moschata] >XP_023536...	[more]
XP_022966582.1	4.9e-120	72.14	transcription factor-like protein DPB isoform X1 [Cucurbita maxima]	[more]
XP_022942391.1	1.1e-119	72.27	transcription factor-like protein DPB isoform X2 [Cucurbita moschata] >XP_023536...	[more]
XP_022966661.1	1.1e-119	72.27	transcription factor-like protein DPB isoform X2 [Cucurbita maxima]	[more]
XP_022141105.1	5.2e-114	69.08	transcription factor-like protein DPB [Momordica charantia]	[more]

BLAST of Carg08058-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G03415.1	4.5e-59	65.83	Transcription factor DP	[more]
AT5G02470.1	9.4e-25	48.25	Transcription factor DP	[more]

BLAST of Carg08058-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FNY2\|DPB_ARATH	8.1e-58	65.83	Transcription factor-like protein DPB OS=Arabidopsis thaliana OX=3702 GN=DPB PE=...	[more]
sp\|Q9FNY3\|DPA_ARATH	1.7e-23	48.25	Transcription factor-like protein DPA OS=Arabidopsis thaliana OX=3702 GN=DPA PE=...	[more]
sp\|Q14186\|TFDP1_HUMAN	7.9e-21	36.32	Transcription factor Dp-1 OS=Homo sapiens OX=9606 GN=TFDP1 PE=1 SV=1	[more]
sp\|Q17QZ4\|TFDP1_BOVIN	1.8e-20	40.00	Transcription factor Dp-1 OS=Bos taurus OX=9913 GN=TFDP1 PE=2 SV=1	[more]
sp\|Q14188\|TFDP2_HUMAN	3.0e-20	38.73	Transcription factor Dp-2 OS=Homo sapiens OX=9606 GN=TFDP2 PE=1 SV=2	[more]

BLAST of Carg08058-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C242\|A0A1S3C242_CUCME	3.0e-110	66.57	transcription factor-like protein DPB isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A1S3C1D5\|A0A1S3C1D5_CUCME	3.9e-110	66.39	transcription factor-like protein DPB isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0KZ86\|A0A0A0KZ86_CUCSA	3.9e-110	66.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G106850 PE=3 SV=1	[more]
tr\|A0A2I4ECM4\|A0A2I4ECM4_9ROSI	1.5e-88	58.22	transcription factor-like protein DPB isoform X1 OS=Juglans regia OX=51240 GN=LO...	[more]
tr\|A0A151SD62\|A0A151SD62_CAJCA	4.2e-88	58.10	Transcription factor Dp-1 OS=Cajanus cajan OX=3821 GN=KK1_025446 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0007049	cell cycle
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005667	transcription factor complex

Vocabulary: **INTERPRO**
Term	Definition
IPR036390	WH_DNA-bd_sf
IPR037241	E2F-DP_heterodim
IPR015648	Transcrpt_fac_DP
IPR038168	TF_DP_C_sf
IPR036388	WH-like_DNA-bd_sf
IPR014889	Transc_factor_DP_C
IPR003316	E2F_WHTH_DNA-bd_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg08058	Carg08058	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg08058-RA	Carg08058-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08058-RA.CDS.6	Carg08058-RA.CDS.6	CDS
Carg08058-RA.CDS.5	Carg08058-RA.CDS.5	CDS
Carg08058-RA.CDS.4	Carg08058-RA.CDS.4	CDS
Carg08058-RA.CDS.3	Carg08058-RA.CDS.3	CDS
Carg08058-RA.CDS.2	Carg08058-RA.CDS.2	CDS
Carg08058-RA.CDS.1	Carg08058-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08058-RA.exon.6	Carg08058-RA.exon.6	exon
Carg08058-RA.exon.5	Carg08058-RA.exon.5	exon
Carg08058-RA.exon.4	Carg08058-RA.exon.4	exon
Carg08058-RA.exon.3	Carg08058-RA.exon.3	exon
Carg08058-RA.exon.2	Carg08058-RA.exon.2	exon
Carg08058-RA.exon.1	Carg08058-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 158..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..262
None	No IPR available	PANTHER	PTHR12548:SF15	SUBFAMILY NOT NAMED	coord: 27..105 coord: 106..222
IPR003316	E2F/DP family, winged-helix DNA-binding domain	SMART	SM01372	E2F_TDP_2	coord: 94..142 e-value: 5.0E-11 score: 52.6
IPR003316	E2F/DP family, winged-helix DNA-binding domain	PFAM	PF02319	E2F_TDP	coord: 107..142 e-value: 1.5E-14 score: 53.6
IPR014889	Transcription factor DP, C-terminal	SMART	SM01138	DP_2	coord: 149..270 e-value: 2.0E-12 score: 57.3
IPR014889	Transcription factor DP, C-terminal	PFAM	PF08781	DP	coord: 150..222 e-value: 1.1E-12 score: 48.0
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	G3DSA:1.10.10.10		coord: 103..147 e-value: 2.4E-19 score: 71.0
IPR038168	Transcription factor DP, C-terminal domain superfamily	GENE3D	G3DSA:1.20.140.80		coord: 148..226 e-value: 2.0E-12 score: 49.0
IPR015648	Transcription factor DP	PANTHER	PTHR12548	TRANSCRIPTION FACTOR DP	coord: 27..105 coord: 106..222
IPR037241	E2F-DP heterodimerization region	SUPERFAMILY	SSF144074	E2F-DP heterodimerization region	coord: 148..223
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	SSF46785	"Winged helix" DNA-binding domain	coord: 102..143