Carg07483-RA (mRNA) Silver-seed gourd

Overview
NameCarg07483-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptiontransmembrane protein 33 homolog
LocationCucurbita_argyrosperma_scaffold_019 : 1063382 .. 1065993 (+)
Sequence length1202
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACCAGTCCTCCTCCGTCTTCTCCTTGCAGTTACACACACAGAAAAATGGGGGAAATCAGCGAAGAAACTCAGAGGCTTAAGCGAATTGCGGCGGCGACTTACGACTACGACAACGACCCCCGATGGGCCGATTACTGGTCCAACATTCTCATTCCTCCCAACTTGGTTTCTCGCTCCGACGTCACCGATCACTTCAAACGAAAATTCTACCAGCGCTACATCGTCGGTTCTTTCTCTGATCTGTAGTTTGATCGTTAATGTTTGTGAAATGATAGAGTTAATTCGTTGATTTTTGTTTCTTGTTGGACACCCTTTCTTGGGTTATCTCGAATTTTGTGGTTTGCATTGTCGGGTTTTGTTAATTGTTTGTTTTTGTAAATGTGTATGGTTCTTGTTTTTCTTGTCTGATAGGTATTTCTTGTGCCCAGTTAGTTCTTGAGTTGTGGATTTATTGCGTGATTGTTCTGTAATCTCATTTATCAATCTGTTGATATTCTGAAACTTGCCTTTTCTGGTATGTACTTTGATGTCTTCAGGATTCTTGTTGTTTGATTGGATTTGTTTTCTTGATTGAACAATGTATCTTTAAGCTTTTATCCAGCTTAAACACTGTTGGGCTTATCTGTTTTCCTGGGTAGTTCGTCATTTTCATACATCAAGGGAATAAGTACACTCCTGTATGTTCATCTGAGGGCCTGTAACGTATCAAGATACTGTTCTTTATGCCTGAGCGATCAGTTAAGCTTCTATTTGATTCTTGGATTAATCTTGTTTTGTTGAATGTCTCATTTATATGTCTATTATCATACCATTTGTTGTAAACATTGGATGAAAAGGCTGATGCCGAAGTTTTTATCATACCATTTGGAGTTTTCTTTAAGTACTGTTATTCAAATATGCAGGATCCTGATCTTGTAGTTGAGACAATGTCTTCCGGCAGTTCATCATTTCAGCCAGGGAGGCAGTCAGCACCTTCACCTCCTACATATGATCAAACTCAGTCACAGAGCTCCGGTATGGGATTTATCATTAAGAAAGTTGCTTTCCAGAGCGGACTTGCATTGTAGATTACCATGTTTGTTACGCGATTTACTAATTGGGTTTCGTTTACATAATGTAGGGTCAACTACAAGAAATCCAGGAACATCGGCAACTACAGGTTCAAATTGGATGTATTTACGCTGGGATCGACATAGGGTTCTTTTTTTGGTCAATGCTTGGGTAAAGTGAAATTCTTCAGCCATCCTAATATTTAGAAGTGTGTCAAGTAGACCTCTTAAGAATTAGACTTTATTTGCAGAATCAAGTCGGGTTTACCGAACCTTATGGGTTGCCATTCGTTATTTCCTGTAGGTGTTTCTCTTGTCATCGTTGGCAGTGATACCAATGGTTCCCAGAACCATTTCACATAGGGCGTATCAGATTTCTCTTATGGGCACTGCATGCTCCTCTCTATTCACCTTGTTCATTACTTGTGGGGTAAGTTTTTTGGTCAAGTAACTATTGCCTTCTAGTATACCTCAAGGTTCGTCTGACCTGTTTTATCTAGCAGACACCCAGGTCGTTCGATATGCAGGCTTTGGAAGTTTACTTCCGACCTGTCGTTGCAACAAAAGCTCTCGTCTACCTTATTTACTCCATTACCTTTGTAGCTTCAAATCTTTTCCTTAAACGTATAGCTGCTTTGCCTTTTACCCTTGTCTAACTTTATGCAGTTTTTGCTCAGTTATGCATGGTATAACGGTTTCTCCTTTGTTACAGTTGCTTTAATTCCAATTATATGCGTAGCTGTTGAGCAGATTTCCAAGTACGTTCGGCATAATTTCCCCCGATCTGCCTTCTACAGGTAAAGTGGCAAGGTTTCTCTCAAGTTAAATTGTTCACTTGTACAAGCTAAAGAGATTGGCTTAATCTGAGTATATGAACACAAAATAACTCATTTTGTTCTTAGTTTTCTCTATATAACTGAGCTGTGCTTGAACTTTCTTCACTTAATGATTACCATATATTTAGATTTGAATTTCACTTTCTGTGTGGATTGGAGCACTCATTGATCTGTTTGGTTGCTTAGGAAATGCTTGGAGCGTCCTTGTGCTTGGGTGGAATCAAATACAATCACACTTTGTCTTCTGTCTTCAAATGTTGAGATTGCACTGGGTTTCCTTCTGATCATCTCCTTATTCACGTCAGTTCCTCGTCGTCGTCTTTTTCGTTTTCCATCATTAACAATCATTTCATTCTGTAAATCCATCGCCTCGGTTTCTCTATGCAGATGGCAGCGAAACTTCGTGCAAACATTCATGTACTGGCAGGTTGGTTCCTTCTGTCTCTAGTTTGGCTTGCACGAAACAGCAGCGTAGCTAACTTGAGCACACCCATTTCAGAGTACTAACTTCCTTGAAACTGTGTGGTTTGCAGCTACTGAAGCTGATGTACCACTTCCCCTTGACTGCTGGGTATCATCAGAGTGCGTGGGCTAAGATTGGGAGAAAAGTTAATCCATTTGTGAACAGATTTCTCCCATTTTTGAAGCCTTTACTTTCTGCAGCTCAAAGATGGTGGCTCAGGTAGAGAAACCAAGAACAAGAAAGTGGTTTCTGTTAGTTTGCA

mRNA sequence

AAACCAGTCCTCCTCCGTCTTCTCCTTGCAGTTACACACACAGAAAAATGGGGGAAATCAGCGAAGAAACTCAGAGGCTTAAGCGAATTGCGGCGGCGACTTACGACTACGACAACGACCCCCGATGGGCCGATTACTGGTCCAACATTCTCATTCCTCCCAACTTGGTTTCTCGCTCCGACGTCACCGATCACTTCAAACGAAAATTCTACCAGCGCTACATCGATCCTGATCTTGTAGTTGAGACAATGTCTTCCGGCAGTTCATCATTTCAGCCAGGGAGGCAGTCAGCACCTTCACCTCCTACATATGATCAAACTCAGTCACAGAGCTCCGGGTCAACTACAAGAAATCCAGGAACATCGGCAACTACAGGTTCAAATTGGATGTATTTACGCTGGGATCGACATAGGGTTCTTTTTTTGGTCAATGCTTGGGTGTTTCTCTTGTCATCGTTGGCAGTGATACCAATGGTTCCCAGAACCATTTCACATAGGGCGTATCAGATTTCTCTTATGGGCACTGCATGCTCCTCTCTATTCACCTTGTTCATTACTTGTGGGACACCCAGGTCGTTCGATATGCAGGCTTTGGAAGTTTACTTCCGACCTGTCGTTGCAACAAAAGCTCTCGTCTACCTTATTTACTCCATTACCTTTGTAGCTTCAAATCTTTTCCTTAAACTTGCTTTAATTCCAATTATATGCGTAGCTGTTGAGCAGATTTCCAAGTACGTTCGGCATAATTTCCCCCGATCTGCCTTCTACAGGAAATGCTTGGAGCGTCCTTGTGCTTGGGTGGAATCAAATACAATCACACTTTGTCTTCTGTCTTCAAATGTTGAGATTGCACTGGGTTTCCTTCTGATCATCTCCTTATTCACGTCAGTTCCTCGTCGTCGTCTTTTTCGTTTTCCATCATTAACAATCATTTCATTCTGTAAATCCATCGCCTCGGTTTCTCTATGCAGATGGCAGCGAAACTTCGTGCAAACATTCATGTACTGGCAGCTACTGAAGCTGATGTACCACTTCCCCTTGACTGCTGGGTATCATCAGAGTGCGTGGGCTAAGATTGGGAGAAAAGTTAATCCATTTGTGAACAGATTTCTCCCATTTTTGAAGCCTTTACTTTCTGCAGCTCAAAGATGGTGGCTCAGGTAGAGAAACCAAGAACAAGAAAGTGGTTTCTGTTAGTTTGCA

Coding sequence (CDS)

ATGGGGGAAATCAGCGAAGAAACTCAGAGGCTTAAGCGAATTGCGGCGGCGACTTACGACTACGACAACGACCCCCGATGGGCCGATTACTGGTCCAACATTCTCATTCCTCCCAACTTGGTTTCTCGCTCCGACGTCACCGATCACTTCAAACGAAAATTCTACCAGCGCTACATCGATCCTGATCTTGTAGTTGAGACAATGTCTTCCGGCAGTTCATCATTTCAGCCAGGGAGGCAGTCAGCACCTTCACCTCCTACATATGATCAAACTCAGTCACAGAGCTCCGGGTCAACTACAAGAAATCCAGGAACATCGGCAACTACAGGTTCAAATTGGATGTATTTACGCTGGGATCGACATAGGGTTCTTTTTTTGGTCAATGCTTGGGTGTTTCTCTTGTCATCGTTGGCAGTGATACCAATGGTTCCCAGAACCATTTCACATAGGGCGTATCAGATTTCTCTTATGGGCACTGCATGCTCCTCTCTATTCACCTTGTTCATTACTTGTGGGACACCCAGGTCGTTCGATATGCAGGCTTTGGAAGTTTACTTCCGACCTGTCGTTGCAACAAAAGCTCTCGTCTACCTTATTTACTCCATTACCTTTGTAGCTTCAAATCTTTTCCTTAAACTTGCTTTAATTCCAATTATATGCGTAGCTGTTGAGCAGATTTCCAAGTACGTTCGGCATAATTTCCCCCGATCTGCCTTCTACAGGAAATGCTTGGAGCGTCCTTGTGCTTGGGTGGAATCAAATACAATCACACTTTGTCTTCTGTCTTCAAATGTTGAGATTGCACTGGGTTTCCTTCTGATCATCTCCTTATTCACGTCAGTTCCTCGTCGTCGTCTTTTTCGTTTTCCATCATTAACAATCATTTCATTCTGTAAATCCATCGCCTCGGTTTCTCTATGCAGATGGCAGCGAAACTTCGTGCAAACATTCATGTACTGGCAGCTACTGAAGCTGATGTACCACTTCCCCTTGACTGCTGGGTATCATCAGAGTGCGTGGGCTAAGATTGGGAGAAAAGTTAATCCATTTGTGAACAGATTTCTCCCATTTTTGAAGCCTTTACTTTCTGCAGCTCAAAGATGGTGGCTCAGGTAG

Protein sequence

MGEISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYIDPDLVVETMSSGSSSFQPGRQSAPSPPTYDQTQSQSSGSTTRNPGTSATTGSNWMYLRWDRHRVLFLVNAWVFLLSSLAVIPMVPRTISHRAYQISLMGTACSSLFTLFITCGTPRSFDMQALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAFYRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTSVPRRRLFRFPSLTIISFCKSIASVSLCRWQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVNRFLPFLKPLLSAAQRWWLR
Homology
[Close]
BLAST of Carg07483-RA vs. NCBI nr
Match: XP_022949013.1 (uncharacterized protein LOC111452483 [Cucurbita moschata])

HSP 1 Score: 662.1 bits (1707), Expect = 1.1e-186
Identity = 337/371 (90.84%), Postives = 339/371 (91.37%), Query Frame = 0 

Query: 1   MGEISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYID 60
           MGEISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYID
Sbjct: 1   MGEISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYID 60

Query: 61  PDLVVETMSSGSSSFQPGRQSAPSPPTYDQTQSQSSGSTTRNPGTSATTGSNWMYLRWDR 120
           PDLVVETMSSGSSSFQPGRQSAPSPPT DQTQSQSSGSTTRNPGTSATTGSNWMYLRWDR
Sbjct: 61  PDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWDR 120

Query: 121 HRVLFLVNAWVFLLSSLAVIPMVPRTISHRAYQISLMGTACSSLFTLFITCGTPRSFDMQ 180
           HRVLFLVNAWVFLLSSLAV+PMVPR ISHRAYQISLMGTACSSLFTLFITCG PRSFDMQ
Sbjct: 121 HRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDMQ 180

Query: 181 ALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAFY 240
           ALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAFY
Sbjct: 181 ALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAFY 240

Query: 241 RKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTSVPRRRLFRFPSLTIISFCKS 300
           RKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFT                     
Sbjct: 241 RKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFT--------------------- 300

Query: 301 IASVSLCRWQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVNRFLPFLKP 360
                   WQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFV+RFLPFLKP
Sbjct: 301 --------WQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKP 342

Query: 361 LLSAAQRWWLR 372
           LLSAAQRWWLR
Sbjct: 361 LLSAAQRWWLR 342

[Close]
BLAST of Carg07483-RA vs. NCBI nr
Match: XP_023525188.1 (uncharacterized protein LOC111788863 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 645.2 bits (1663), Expect = 1.4e-181
Identity = 329/371 (88.68%), Postives = 333/371 (89.76%), Query Frame = 0 

Query: 1   MGEISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYID 60
           MGEISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYID
Sbjct: 1   MGEISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYID 60

Query: 61  PDLVVETMSSGSSSFQPGRQSAPSPPTYDQTQSQSSGSTTRNPGTSATTGSNWMYLRWDR 120
           PDLVVETMSSGSSSFQPGRQSA SPPT DQTQSQ     TRN GTSATTGSNWMYLRWDR
Sbjct: 61  PDLVVETMSSGSSSFQPGRQSAASPPTNDQTQSQXXXXXTRNSGTSATTGSNWMYLRWDR 120

Query: 121 HRVLFLVNAWVFLLSSLAVIPMVPRTISHRAYQISLMGTACSSLFTLFITCGTPRSFDMQ 180
           HRVLFLVNAWVFLLSSLAVIPMVPR ISHRAYQISLMGTACSSLFTLFITCGTPRSFDMQ
Sbjct: 121 HRVLFLVNAWVFLLSSLAVIPMVPRNISHRAYQISLMGTACSSLFTLFITCGTPRSFDMQ 180

Query: 181 ALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAFY 240
           ALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQI+KYV+HNFPRSAFY
Sbjct: 181 ALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQIAKYVQHNFPRSAFY 240

Query: 241 RKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTSVPRRRLFRFPSLTIISFCKS 300
           RKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFT                     
Sbjct: 241 RKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFT--------------------- 300

Query: 301 IASVSLCRWQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVNRFLPFLKP 360
                   WQRNFVQTFMYWQLLKLMYHFP+TAGYHQSAWAKIGRKVNPFV+RFLPFLKP
Sbjct: 301 --------WQRNFVQTFMYWQLLKLMYHFPMTAGYHQSAWAKIGRKVNPFVSRFLPFLKP 342

Query: 361 LLSAAQRWWLR 372
           LLSAAQRWWLR
Sbjct: 361 LLSAAQRWWLR 342

[Close]
BLAST of Carg07483-RA vs. NCBI nr
Match: XP_022998724.1 (transmembrane protein 33 homolog [Cucurbita maxima])

HSP 1 Score: 624.8 bits (1610), Expect = 1.9e-175
Identity = 316/371 (85.18%), Postives = 327/371 (88.14%), Query Frame = 0 

Query: 1   MGEISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYID 60
           MGEISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYID
Sbjct: 1   MGEISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYID 60

Query: 61  PDLVVETMSSGSSSFQPGRQSAPSPPTYDQTQSQSSGSTTRNPGTSATTGSNWMYLRWDR 120
           P+LVVETMSS SSSFQPGRQSAPSPPT DQTQ       TRN GTSATT SNW++LRWDR
Sbjct: 61  PNLVVETMSSSSSSFQPGRQSAPSPPTNDQTQXXXXXXXTRNSGTSATTDSNWLFLRWDR 120

Query: 121 HRVLFLVNAWVFLLSSLAVIPMVPRTISHRAYQISLMGTACSSLFTLFITCGTPRSFDMQ 180
           HRVLFLVNAWVFLL+S A+IPMVPR ISHRAYQISLMGTACSSLFTLFITCGTPRSFDMQ
Sbjct: 121 HRVLFLVNAWVFLLTSFAMIPMVPRNISHRAYQISLMGTACSSLFTLFITCGTPRSFDMQ 180

Query: 181 ALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAFY 240
           ALEVYF+PVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQI+K+VRHNFPRSAFY
Sbjct: 181 ALEVYFQPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQIAKFVRHNFPRSAFY 240

Query: 241 RKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTSVPRRRLFRFPSLTIISFCKS 300
           RKCLERPCAW ESNT TLCLLSSNVEIALGFLLIISLFT                     
Sbjct: 241 RKCLERPCAWAESNTTTLCLLSSNVEIALGFLLIISLFT--------------------- 300

Query: 301 IASVSLCRWQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVNRFLPFLKP 360
                   WQRNFVQTFMYWQLLKLMYHFP+TAGYHQSAWAKIGRKVNPFV+RFLPFLKP
Sbjct: 301 --------WQRNFVQTFMYWQLLKLMYHFPMTAGYHQSAWAKIGRKVNPFVSRFLPFLKP 342

Query: 361 LLSAAQRWWLR 372
           LLSAAQRWW+R
Sbjct: 361 LLSAAQRWWIR 342

[Close]
BLAST of Carg07483-RA vs. NCBI nr
Match: XP_022143363.1 (uncharacterized protein LOC111013250 isoform X2 [Momordica charantia] >XP_022143364.1 uncharacterized protein LOC111013250 isoform X3 [Momordica charantia])

HSP 1 Score: 445.7 bits (1145), Expect = 1.6e-121
Identity = 231/371 (62.26%), Postives = 264/371 (71.16%), Query Frame = 0 

Query: 1   MGEISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYID 60
           M E SEETQRLKRIAAA YDYDND RWADYWSNILIPPNLVSRSDV DHFKRKFYQR+ID
Sbjct: 1   MAETSEETQRLKRIAAAAYDYDNDSRWADYWSNILIPPNLVSRSDVIDHFKRKFYQRHID 60

Query: 61  PDLVVETMSSGSSSFQPGRQSAPSPPTYDQTQSQSSGSTTRNPGTSATTGSNWMYLRWDR 120
           PDLVV+T+S  S   Q  RQS                                       
Sbjct: 61  PDLVVQTVSFSSLPSQSARQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHLCL 120

Query: 121 HRVLFLVNAWVFLLSSLAVIPMVPRTISHRAYQISLMGTACSSLFTLFITCGTPRSFDMQ 180
           H +LF +NAWV +++  A++PMVP+ +SHRA+++S MGT  SSLF+L I+CG P++ DMQ
Sbjct: 121 HMILFSINAWVLIVALFAMLPMVPKNLSHRAFRLSFMGTTFSSLFSLLISCGAPKALDMQ 180

Query: 181 ALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAFY 240
           ALEVYF+ VVATKA VY IY +TFVASNL LK ALIPIIC  +EQI+K++R +FPRS FY
Sbjct: 181 ALEVYFQSVVATKAFVYFIYCLTFVASNLCLKFALIPIICGTIEQIAKFLRRSFPRSLFY 240

Query: 241 RKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTSVPRRRLFRFPSLTIISFCKS 300
           RKCLERPCAWVESNT TL LLSSNVEIALGFLLIISLF+                     
Sbjct: 241 RKCLERPCAWVESNTTTLSLLSSNVEIALGFLLIISLFS--------------------- 300

Query: 301 IASVSLCRWQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVNRFLPFLKP 360
                   WQRNFV TFMYWQLL+LMYHFP+TAGYHQS WAK+GRKVNPFV+RFLPFLKP
Sbjct: 301 --------WQRNFVLTFMYWQLLRLMYHFPMTAGYHQSGWAKVGRKVNPFVSRFLPFLKP 342

Query: 361 LLSAAQRWWLR 372
            LSAA+RWW+R
Sbjct: 361 SLSAAERWWIR 342

[Close]
BLAST of Carg07483-RA vs. NCBI nr
Match: XP_022143362.1 (uncharacterized protein LOC111013250 isoform X1 [Momordica charantia])

HSP 1 Score: 445.7 bits (1145), Expect = 1.6e-121
Identity = 231/371 (62.26%), Postives = 264/371 (71.16%), Query Frame = 0 

Query: 1   MGEISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYID 60
           M E SEETQRLKRIAAA YDYDND RWADYWSNILIPPNLVSRSDV DHFKRKFYQR+ID
Sbjct: 1   MAETSEETQRLKRIAAAAYDYDNDSRWADYWSNILIPPNLVSRSDVIDHFKRKFYQRHID 60

Query: 61  PDLVVETMSSGSSSFQPGRQSAPSPPTYDQTQSQSSGSTTRNPGTSATTGSNWMYLRWDR 120
           PDLVV+T+S  S   Q  RQS                                       
Sbjct: 61  PDLVVQTVSFSSLPSQSARQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHLCL 120

Query: 121 HRVLFLVNAWVFLLSSLAVIPMVPRTISHRAYQISLMGTACSSLFTLFITCGTPRSFDMQ 180
           H +LF +NAWV +++  A++PMVP+ +SHRA+++S MGT  SSLF+L I+CG P++ DMQ
Sbjct: 121 HMILFSINAWVLIVALFAMLPMVPKNLSHRAFRLSFMGTTFSSLFSLLISCGAPKALDMQ 180

Query: 181 ALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAFY 240
           ALEVYF+ VVATKA VY IY +TFVASNL LK ALIPIIC  +EQI+K++R +FPRS FY
Sbjct: 181 ALEVYFQSVVATKAFVYFIYCLTFVASNLCLKFALIPIICGTIEQIAKFLRRSFPRSLFY 240

Query: 241 RKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTSVPRRRLFRFPSLTIISFCKS 300
           RKCLERPCAWVESNT TL LLSSNVEIALGFLLIISLF+                     
Sbjct: 241 RKCLERPCAWVESNTTTLSLLSSNVEIALGFLLIISLFS--------------------- 300

Query: 301 IASVSLCRWQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVNRFLPFLKP 360
                   WQRNFV TFMYWQLL+LMYHFP+TAGYHQS WAK+GRKVNPFV+RFLPFLKP
Sbjct: 301 --------WQRNFVLTFMYWQLLRLMYHFPMTAGYHQSGWAKVGRKVNPFVSRFLPFLKP 342

Query: 361 LLSAAQRWWLR 372
            LSAA+RWW+R
Sbjct: 361 SLSAAERWWIR 342

[Close]
BLAST of Carg07483-RA vs. TAIR10
Match: AT3G02420.1 (unknown protein)

HSP 1 Score: 328.9 bits (842), Expect = 3.9e-90
Identity = 179/377 (47.48%), Postives = 219/377 (58.09%), Query Frame = 0 

Query: 1   MGEISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYID 60
           M E  E++QRLK+IAAA +DY+ND RWADYWSNILIPP++ SR +V DHFKRKFYQRYID
Sbjct: 1   MAEGGEDSQRLKKIAAAAFDYENDARWADYWSNILIPPHMASRPEVVDHFKRKFYQRYID 60

Query: 61  PDLVVETMSS------GSSSFQPGRQSAPSPPTYDQTQSQSSGSTTRNPGTSATTGSNWM 120
           PDLVVE MS+                              +SGS  R  G SATTG+   
Sbjct: 61  PDLVVEPMSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGSVPRTSGPSATTGATPS 120

Query: 121 YLRWDRHRVLFLVNAWVFLLSSLAVIPMVPRTISHRAYQISLMGTACSSLFTLFITCGTP 180
            +RWD   + F VNAWVF++                                       P
Sbjct: 121 SMRWDEQTIQFSVNAWVFVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRP 180

Query: 181 RSFDMQALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNF 240
           R+++MQ L+VYF+ +VA K  +Y IY +TFV S+L LK ALIPI+C A+EQ++K++R NF
Sbjct: 181 RAWNMQGLQVYFQSIVAAKDFIYFIYCLTFVTSHLCLKFALIPILCRALEQVAKFLRRNF 240

Query: 241 PRSAFYRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTSVPRRRLFRFPSLTI 300
            RS  YRK LE PC WVESNT TL +LSS  EIA+GFLLIISL +               
Sbjct: 241 GRSTIYRKYLEDPCVWVESNTTTLNILSSQAEIAIGFLLIISLLS--------------- 300

Query: 301 ISFCKSIASVSLCRWQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVNRF 360
                         WQRN +QTFMYWQLLKLMY  P+TAGYHQS W++IGR V P + R+
Sbjct: 301 --------------WQRNIIQTFMYWQLLKLMYQAPVTAGYHQSTWSRIGRTVTPIIQRY 348

Query: 361 LPFLKPLLSAAQRWWLR 372
            PFL   +SA QRWW R
Sbjct: 361 APFLNTPVSAVQRWWFR 348

[Close]
BLAST of Carg07483-RA vs. TrEMBL
Match: tr|A0A1U8IR42|A0A1U8IR42_GOSHI (transmembrane protein 33 homolog isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107899364 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.0e-114
Identity = 208/370 (56.22%), Postives = 269/370 (72.70%), Query Frame = 0 

Query: 4   ISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYIDPDL 63
           +SE+ Q+LK+IAAA YDY+NDPRWADYWSNILIPP++ SRSDV DHFKRKFYQRYIDPDL
Sbjct: 1   MSEDPQKLKKIAAAAYDYENDPRWADYWSNILIPPHMASRSDVVDHFKRKFYQRYIDPDL 60

Query: 64  VVETMSSG--SSSFQPGRQSAPSPPTYDQTQSQSSGSTTRNPGTSATTGSNWMYLRWDRH 123
           VVE MSS   + S +P   SA S     + ++ S+GST R  G SA +GSN   L WDRH
Sbjct: 61  VVEAMSSSAQTGSAKPTSSSASSLVANGEARAHSAGSTARTSGPSAGSGSNTTSLHWDRH 120

Query: 124 RVLFLVNAWVFLLSSLAVIPMVPRTISHRAYQISLMGTACSSLFTLFITCGTPRSFDMQA 183
            + F VNAWVF+++ LA+ P+VP+++S+RAY++S +GTACSS+++L+   G PR++ +Q 
Sbjct: 121 TIQFSVNAWVFIVAVLAIFPLVPKSLSNRAYRLSFIGTACSSVYSLYALYGRPRAWTLQD 180

Query: 184 LEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAFYR 243
           ++VYF+ V+ATK  +Y IY +TFV S+L LK ALIPI+C +VE+I+K++RHNF RS  YR
Sbjct: 181 VQVYFQSVIATKDFIYFIYCLTFVTSHLCLKFALIPILCRSVERIAKFLRHNFSRSTLYR 240

Query: 244 KCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTSVPRRRLFRFPSLTIISFCKSI 303
           K LE PC WVESNT TL +LSS+ EI LG+LL++SLF+                      
Sbjct: 241 KYLEDPCVWVESNTTTLSILSSHAEIGLGWLLLVSLFS---------------------- 300

Query: 304 ASVSLCRWQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVNRFLPFLKPL 363
                  WQRN VQTFMYWQLLKLMYH P++AGYHQS WAKIGR +NP + R++PFL   
Sbjct: 301 -------WQRNIVQTFMYWQLLKLMYHSPVSAGYHQSVWAKIGRTINPLILRYVPFLNTP 341

Query: 364 LSAAQRWWLR 372
           +SA Q+WW R
Sbjct: 361 VSAIQKWWSR 341

[Close]
BLAST of Carg07483-RA vs. TrEMBL
Match: tr|A0A2P5QIV1|A0A2P5QIV1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD28593 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.5e-112
Identity = 209/370 (56.49%), Postives = 263/370 (71.08%), Query Frame = 0 

Query: 4   ISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYIDPDL 63
           +SE+ Q+LK+IAAA YDY+NDPRWADYWSNILIPP++ SRSDV DHFKRKFYQRYIDPDL
Sbjct: 1   MSEDPQKLKKIAAAAYDYENDPRWADYWSNILIPPHMASRSDVVDHFKRKFYQRYIDPDL 60

Query: 64  VVETMSSG--SSSFQPGRQSAPSPPTYDQTQSQSSGSTTRNPGTSATTGSNWMYLRWDRH 123
           VVE MSS   + S +P            + ++ S+GST R  G SA +GSN   LRWDRH
Sbjct: 61  VVEAMSSSAQTGSAKPTSXXXXXXXXXXEARAFSAGSTARTSGPSAGSGSNATSLRWDRH 120

Query: 124 RVLFLVNAWVFLLSSLAVIPMVPRTISHRAYQISLMGTACSSLFTLFITCGTPRSFDMQA 183
            + F VNAWVF+++ LA+ P+VPR++S+RAY++S MGTACSS++ L+   G PR++ +QA
Sbjct: 121 TIQFSVNAWVFIVAVLAIFPLVPRSLSNRAYRLSFMGTACSSVYALYALYGRPRAWTLQA 180

Query: 184 LEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAFYR 243
           ++VYF+ V+ATK  +Y IY +TFV S+L LK ALIPI+C ++E I+K++RHNF RS  YR
Sbjct: 181 VQVYFQSVIATKDFIYFIYCLTFVTSHLCLKFALIPILCRSLECIAKFLRHNFSRSTLYR 240

Query: 244 KCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTSVPRRRLFRFPSLTIISFCKSI 303
           K LE PC WVESN  TL +LSS+ EI LG+LLI SLF+                      
Sbjct: 241 KYLEDPCVWVESNNTTLTILSSHAEIGLGWLLIFSLFS---------------------- 300

Query: 304 ASVSLCRWQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVNRFLPFLKPL 363
                  WQRN VQTFMYWQLLKLMYH P+TAGYHQS WAKIGR +NP + R+ PFL   
Sbjct: 301 -------WQRNIVQTFMYWQLLKLMYHAPVTAGYHQSVWAKIGRTINPLILRYAPFLNTP 341

Query: 364 LSAAQRWWLR 372
           +SA Q+WW R
Sbjct: 361 VSAIQKWWSR 341

[Close]
BLAST of Carg07483-RA vs. TrEMBL
Match: tr|A0A1U8P103|A0A1U8P103_GOSHI (transmembrane protein 33 homolog OS=Gossypium hirsutum OX=3635 GN=LOC107953954 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 4.4e-112
Identity = 208/370 (56.22%), Postives = 263/370 (71.08%), Query Frame = 0 

Query: 4   ISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYIDPDL 63
           +SE+ Q+LK+IAAA YDY+NDPRWADYWSNILIPP++ SRSDV DHFKRKFYQRYIDPDL
Sbjct: 1   MSEDPQKLKKIAAAAYDYENDPRWADYWSNILIPPHMASRSDVVDHFKRKFYQRYIDPDL 60

Query: 64  VVETMSSG--SSSFQPGRQSAPSPPTYDQTQSQSSGSTTRNPGTSATTGSNWMYLRWDRH 123
           VVE MSS   + S +P            + ++ S+GST R  G SA +GSN   LRWDRH
Sbjct: 61  VVEAMSSSAQTGSAKPTSXXXXXXXXXXEARAFSAGSTARTSGPSAGSGSNATSLRWDRH 120

Query: 124 RVLFLVNAWVFLLSSLAVIPMVPRTISHRAYQISLMGTACSSLFTLFITCGTPRSFDMQA 183
            + F VNAWVF+++ LA+ P+VPR++S+RAY++S MGTACSS++ L+   G PR++ +QA
Sbjct: 121 TIQFSVNAWVFIVAVLAIFPLVPRSLSNRAYRLSFMGTACSSVYALYALYGRPRAWTLQA 180

Query: 184 LEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAFYR 243
           ++VYF+ V+ATK  +Y IY +TFV S+L L+ ALIPI+C ++E I+K++RHNF RS  YR
Sbjct: 181 VQVYFQSVIATKDFIYFIYCLTFVTSHLCLEFALIPILCRSLECIAKFLRHNFSRSTLYR 240

Query: 244 KCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTSVPRRRLFRFPSLTIISFCKSI 303
           K LE PC WVESN  TL +LSS+ EI LG+LLI SLF+                      
Sbjct: 241 KYLEDPCVWVESNNTTLTILSSHAEIGLGWLLIFSLFS---------------------- 300

Query: 304 ASVSLCRWQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVNRFLPFLKPL 363
                  WQRN VQTFMYWQLLKLMYH P+TAGYHQS WAKIGR +NP + R+ PFL   
Sbjct: 301 -------WQRNIVQTFMYWQLLKLMYHAPVTAGYHQSVWAKIGRTINPLILRYAPFLNTP 341

Query: 364 LSAAQRWWLR 372
           +SA Q+WW R
Sbjct: 361 VSAIQKWWSR 341

[Close]
BLAST of Carg07483-RA vs. TrEMBL
Match: tr|A0A0D2LWA8|A0A0D2LWA8_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G082400 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.2e-111
Identity = 208/370 (56.22%), Postives = 262/370 (70.81%), Query Frame = 0 

Query: 4   ISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYIDPDL 63
           +SE+ Q+LK+IAAA YDY+NDPRWADYWSNILIPP++ SRSDV DHFKRKFYQRYIDPDL
Sbjct: 1   MSEDPQKLKKIAAAAYDYENDPRWADYWSNILIPPHMASRSDVVDHFKRKFYQRYIDPDL 60

Query: 64  VVETMSSG--SSSFQPGRQSAPSPPTYDQTQSQSSGSTTRNPGTSATTGSNWMYLRWDRH 123
           VVE MSS   + S +P            + ++ S+GST R  G SA +GSN   LRWDRH
Sbjct: 61  VVEAMSSSAQTGSAKPTSXXXXXXXXXXEARAFSAGSTARTSGPSAGSGSNATSLRWDRH 120

Query: 124 RVLFLVNAWVFLLSSLAVIPMVPRTISHRAYQISLMGTACSSLFTLFITCGTPRSFDMQA 183
            + F VNAWVF+++ LA+ P+VPR++S+RAY++S MGTA SS++ L+   G PR++ +QA
Sbjct: 121 TIQFSVNAWVFIVAVLAIFPLVPRSLSNRAYRLSFMGTASSSVYALYALYGRPRAWTLQA 180

Query: 184 LEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAFYR 243
           ++VYF+ V+ATK  +Y IY +TFV S+L LK ALIPI+C ++E I+K++RHNF RS  YR
Sbjct: 181 VQVYFQSVIATKDFIYFIYCLTFVTSHLCLKFALIPILCRSLECIAKFLRHNFSRSTLYR 240

Query: 244 KCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTSVPRRRLFRFPSLTIISFCKSI 303
           K LE PC WVESN  TL +LSS+ EI LG+LLI SLF+                      
Sbjct: 241 KYLEDPCVWVESNNTTLSILSSHAEIGLGWLLIFSLFS---------------------- 300

Query: 304 ASVSLCRWQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVNRFLPFLKPL 363
                  WQRN VQTFMYWQLLKLMYH P+TAGYHQS WAKIGR +NP + R+ PFL   
Sbjct: 301 -------WQRNIVQTFMYWQLLKLMYHAPVTAGYHQSVWAKIGRTINPLILRYAPFLNTP 341

Query: 364 LSAAQRWWLR 372
           +SA Q+WW R
Sbjct: 361 VSAIQKWWSR 341

[Close]
BLAST of Carg07483-RA vs. TrEMBL
Match: tr|A0A2K2AST6|A0A2K2AST6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G104900v3 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 4.9e-111
Identity = 204/374 (54.55%), Postives = 264/374 (70.59%), Query Frame = 0 

Query: 1   MGEISEETQRLKRIAAATYDYDNDPRWADYWSNILIPPNLVSRSDVTDHFKRKFYQRYID 60
           MG+ +E++Q+ +RIAAA YDYDNDPRWADYWSNILIPP+L SRSDV DH+KRKFYQRYID
Sbjct: 1   MGQETEDSQKPRRIAAAAYDYDNDPRWADYWSNILIPPHLSSRSDVLDHYKRKFYQRYID 60

Query: 61  PDLVVETMSSGSSS---FQPGRQSAPSPPTYDQTQSQSSGSTTRNPGTSATTGSNWMYLR 120
           PDLVVE MS+  SS               +Y + Q+ ++GST R  G SAT G N   + 
Sbjct: 61  PDLVVEVMSTNGSSQXXXXXXXXXXXXXXSYGEPQTHNTGSTARAFGPSATAGQNPTSVH 120

Query: 121 WDRHRVLFLVNAWVFLLSSLAVIPMVPRTISHRAYQISLMGTACSSLFTLFITCGTPRSF 180
           W R  + F VNAWVF+++ LA+IP+ P+ +S RAY++SL+GTACSSL++L+   G PR++
Sbjct: 121 WYRQTIQFSVNAWVFVVAVLAIIPLAPKNLSSRAYRLSLIGTACSSLYSLYTLYGRPRAW 180

Query: 181 DMQALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRS 240
           ++Q ++VY + ++ATK  +Y IY +TFV S+L LK+ALIPI+C ++E ++K++R NF RS
Sbjct: 181 NLQGIQVYLQSIIATKDFIYFIYCLTFVTSHLCLKVALIPILCRSLEHVAKFLRRNFSRS 240

Query: 241 AFYRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTSVPRRRLFRFPSLTIISF 300
             YRK LE PC WVESNT TL +LSS+ EI LGFLLI+SLF+                  
Sbjct: 241 TLYRKYLEDPCVWVESNTTTLSILSSHTEIGLGFLLIVSLFS------------------ 300

Query: 301 CKSIASVSLCRWQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVNRFLPF 360
                      WQRN +QTFMYWQLLK+MYH P+TAGYHQS WAKIGR +NP ++R+ PF
Sbjct: 301 -----------WQRNIIQTFMYWQLLKIMYHAPVTAGYHQSVWAKIGRTINPLIHRYCPF 345

Query: 361 LKPLLSAAQRWWLR 372
           L   LSA QRWWLR
Sbjct: 361 LNTPLSAVQRWWLR 345

The following BLAST results are available for this feature:
BLAST of Carg07483-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949013.11.1e-18690.84uncharacterized protein LOC111452483 [Cucurbita moschata][more]
XP_023525188.11.4e-18188.68uncharacterized protein LOC111788863 [Cucurbita pepo subsp. pepo][more]
XP_022998724.11.9e-17585.18transmembrane protein 33 homolog [Cucurbita maxima][more]
XP_022143363.11.6e-12162.26uncharacterized protein LOC111013250 isoform X2 [Momordica charantia] >XP_022143... [more]
XP_022143362.11.6e-12162.26uncharacterized protein LOC111013250 isoform X1 [Momordica charantia][more]
BLAST of Carg07483-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT3G02420.13.9e-9047.48unknown protein[more]
BLAST of Carg07483-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg07483-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1U8IR42|A0A1U8IR42_GOSHI8.0e-11456.22transmembrane protein 33 homolog isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC... [more]
tr|A0A2P5QIV1|A0A2P5QIV1_GOSBA1.5e-11256.49Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD28593 PE=4 SV... [more]
tr|A0A1U8P103|A0A1U8P103_GOSHI4.4e-11256.22transmembrane protein 33 homolog OS=Gossypium hirsutum OX=3635 GN=LOC107953954 P... [more]
tr|A0A0D2LWA8|A0A0D2LWA8_GOSRA2.2e-11156.22Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G082400 PE=4 ... [more]
tr|A0A2K2AST6|A0A2K2AST6_POPTR4.9e-11154.55Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G104900v3 PE=... [more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg07483Carg07483gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg07483-RA.exon.1Carg07483-RA.exon.1exon
Carg07483-RA.exon.2Carg07483-RA.exon.2exon
Carg07483-RA.exon.3Carg07483-RA.exon.3exon
Carg07483-RA.exon.4Carg07483-RA.exon.4exon
Carg07483-RA.exon.5Carg07483-RA.exon.5exon
Carg07483-RA.exon.6Carg07483-RA.exon.6exon
Carg07483-RA.exon.7Carg07483-RA.exon.7exon
Carg07483-RA.exon.8Carg07483-RA.exon.8exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg07483-RA.five_prime_UTR.1Carg07483-RA.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg07483-RA.CDS.1Carg07483-RA.CDS.1CDS
Carg07483-RA.CDS.2Carg07483-RA.CDS.2CDS
Carg07483-RA.CDS.3Carg07483-RA.CDS.3CDS
Carg07483-RA.CDS.4Carg07483-RA.CDS.4CDS
Carg07483-RA.CDS.5Carg07483-RA.CDS.5CDS
Carg07483-RA.CDS.6Carg07483-RA.CDS.6CDS
Carg07483-RA.CDS.7Carg07483-RA.CDS.7CDS
Carg07483-RA.CDS.8Carg07483-RA.CDS.8CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg07483-RA.three_prime_UTR.1Carg07483-RA.three_prime_UTR.1three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg07483-RACarg07483-RA-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..106
NoneNo IPR availablePANTHERPTHR30603RNA POLYMERASE SIGMA FACTOR RPOcoord: 10..278
NoneNo IPR availablePANTHERPTHR30603:SF18SUBFAMILY NOT NAMEDcoord: 304..367
NoneNo IPR availablePANTHERPTHR30603RNA POLYMERASE SIGMA FACTOR RPOcoord: 304..367
NoneNo IPR availablePANTHERPTHR30603:SF18SUBFAMILY NOT NAMEDcoord: 10..278