Carg07247-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGATTCTATTTCCGGAAAGTGATTGATCGCGCACGTTATTGGTCGTTCCCATTCGATTGAAACGTGAAGTTTTGTGGGAAGATTCTATGTTTTGATCGGTTTTTGTTTGAAGGGTTTTTTCGCTGCGGCTACAAGATGAGGAACAAATCGCAGGCGGCAAAATCTGGGGAGAATGCAGAATTGGTTTGTGATTCGACTCTTATTCTTGTTCTGTTTGTTTCATGCATTTTTGTTTCGAACTCTTAAGCTGTTTGTGTTTGAGAATTAGTTGTTTTAAATTTGAAGTTGAAGCTAGTAATGAACTTATAGGATGGAATGGAATGGAATGGAAGTAATGAAGTTAATGATCTTTCCCCTTATGTAATCTTAAGTGGATAGCAATGGCATAGTAACAAACTATAGACTCACATAATGATCGTCACTTTGTTGCTGAAGTTTTTCTTCAATCGTCCTTTGGAACTGCAAAATTTTCATTGTAGGGCTGTTTTAGGAGTTTAGAGTTGTGGGATCCCACACCGATTGGAGAGGGAAACGAGTGCCAGCGAGGATGTTGGGCCTCGAAGGAGGTGGATTGTGAGATCCCATATCGGTTGGAGAGGAGGACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTCTATAACCTTGAGGGGCAGCCCGAAAGGGAAAGTCCAAAGAAGGCAGTATCTACTAATGGTGAACTTGGACGGTTACTAATCATGAACGTTGCATCAATACCCCGCTCATGAAATCTTTATTGGTTGTTTGTGCTTGTGAGGGTCAATGTTTTAGACTTTATTTTGAGTATCTCAACTTCTTTCATCCTTGCCCTCGGCATGTGGTGTTGTTGTAACGGCCCAAGAACACTCCTAACAAATATTGTCCTCTTTGGGCTTTCCCTTCTAAGCTTCCCCTCAAGATTTTTAAAACGCGTCTAGTAGAGAGAGGTTTCTACTCCCTTATAAAGGTTGTTTTGTTCCCCTCCCCAACCAATATGGGATCTCACCGTTGCATTTGACATGCTCCTATGCTTTTCATGTCTGTGTGCGCATTACCTTTATCCTTCTCTCGAGTAAATTTCGAAACTGTAGAATAACTTGTGCGTTTTGAATCAATCTGTTGAGTTAGTACTTCAAAACCGAAGCCCGAAAAGATCATTCGTTTTTGCAGAGCACAGAAGCAACACACGAAAGCACAATGACACCATCTGAGAGATCAGAAGGAGGTACCAATCCATCCTTGAAGAAAGTAAAATCACCATCGACCAGTCGAAGTTCTTCTAAAAAGAAAGTGAATACGGTCTCCATTCGTCGATCAGAGCGTATACAAAATTCTACGCCTCTAAACTTCAAAATACAAAACGTCATTGAAGAGATTAATCTTAGTGAAAGTGATAAAGAAGATGAGTTACCTACTGACCATGAGAAAAGTTCTCCATCTCCCAGCAAAGAGAATGGTTGGCCAGAGTTAATGATGGGGACAAGGAGGTTTGAAGCTAAAATTGACTATATTCTTAAACTATTCGAAACACATGGCCATACCTTAGACTCAATAAAGACAGAGGTACAGACCATTTTTTTTGTTCTTTTCTGTTGTGTTCTTAGGTTGAATAATTTTGCTCATTAATTGGTGAATGGCAGGTAATCAAGCGATCGTTCTTAACCGAAACGGTACCTACGCCTGATATGAATTACAAGAGCATGTATATAGCTTCCCAGAAAAAGGTTCTCTTAGTGATATCCATCTTCAAATGTTTTTGAGGCCAACTTGAGCTCATTAAAGAACCAACTATTTGGTTATGTGCAGATTGAAGAACTAGCTGAAGAAAATCGAGTGCTTACGAAAAAGTTGGAGAATGCTCACGAACTATTTGAAGCGGTATGTATTATCGAATTCTACTTCTGCTAGCTATCATGGTTATGATCTGCATGGACATTGTTTTGTTTTGTTCTTTTTTTTGTTTGAAAAGGAACCGAAGAAACTTTTGTTGATAGGATAAAAATGTCCATAAGAAAGTCCCAAAAGAGCCTTAGAACTAGTAAACAAGCGCCCAGTTCAATTATAATAGCGGATATTGTCCTTTTTGGGCTTACCCTTTTGGATTTCTCCTCGAGATTTTTAAAACGTGTTTTCTAGGGAGAGGTTTCCACACCCTTGTAAAGAATGCTTCATTCCCCTCTCCAACTGATGTGGGATCTCACACTCCACCCCCCTTCAGGGCCCTGCGTCCTTGCTAGCATTTGTTCCCATCTCCAGTTGATGTGGAATCTCACAATCCACCCCCTGAAGGGGCTTAGTGTCCTCGCTGGCACACCACCTAATGTCCACCCTCTTTAGGGCTCAACATCCTCGTTGGCACACCGCCCGGTCTCTTGGCTTTGATACCATGTGTAATAACTCAAGCCCACCGTGGCGGATATTGTTCTCTTTGGGCTTTCCCTTTCATGCTTTCCCTCAAGGTTTCTAAAACATGTCTGCTAGGGAGAGGTTTTTACACCCTTATAAAGAATGTTTCGTTCCCCTCTCGAACAGTAACAATCTATCCTTTGGTCCATTACGTAGAGCGATTTTAGCCCTTCCATTCCAAACCAACCCAGGTTTTCCTTTGGTCCATTACGTATCGTCATCAGCCTCACAATTTTAAAACACGTCTACTAGGGAGAGGTTTCTACACCCTTATAAAGAATGCTCTATTCCCCCTCCAACCGATGTGAGATCTCACAATCCACTCCTTTGGGGGCCAGTGTCCTCATTGGCACACTGCTCGGTGTCTGGCTCTGATACCATTTGTAACAGCCCAAACCCACCGCTAGGAAATATTGTCTGCTTTGGCCCGTTATGTATCACAGTCAGTCTCACGGTTTTAAAACACGTCTACTAGGGAGATGTTCCGTTCCCCTCTCTGACCGACGTGGGATCTCACAGATTGTCTTTTAGACCTTTCTCGATCAAATAGAGTCCAAAGGCATTAACAAAGTAATCTTGTTGAATTTGGTCCTTATTATACCAAAATATTCTCAATAATATCATCTGATTCAGCATTTTATATTGTTAATTTACTTGCATCATTTTCTGAAAACAATGTGTTACCATCACTAATGCTCTATTTTGTGTTATGTCCATGTCCAAATTATGTCATGTCTCTGACTTTTTAACTCGTTGACTTTCTAATCTTTAAGCTAATTGATGTTTAGTGCCTAAAAAGTTTGTTAATTACTTACATGAGTTTATACAATACATGGGATTAGCAAACCGATAGCTCGGCATAAGCAAACTCACACACCGAACATATAGACATAACGATACTTATTTAGTTATAAGATTGTGCAGTACAAGAACGGGAATCGTGATGCTTTTGAAATGTTGGAGAAGTTGAAGGACGTCGTTTTGATCTCGAACGGTTTGAGAGCTTCTGAATCGACTCAAGCTACGTCTCAAGTCGAACCCGACAAGGTTCCGGGTCTCGACGCTGACAATGTACCTCCTTCAAGCAAGAGAAAGAAGCTCACTAAACAAAAATGAACTTGAATGTGAGTTACCTCTTGATGCTTATAACTCCTCCCTCGCTTGCTTACTCTTCAGTTAAGACTTCTTTATGTTGCTGTTCTTTGTTTGTTGGACTATACAATAGAATGGTGGCCCTTAAAATATATTAAATTATAAATTGGCGAGCTTAAA AAGATTCTATTTCCGGAAAGTGATTGATCGCGCACGTTATTGGTCGTTCCCATTCGATTGAAACGTGAAGTTTTGTGGGAAGATTCTATGTTTTGATCGGTTTTTGTTTGAAGGGTTTTTTCGCTGCGGCTACAAGATGAGGAACAAATCGCAGGCGGCAAAATCTGGGGAGAATGCAGAATTGAGCACAGAAGCAACACACGAAAGCACAATGACACCATCTGAGAGATCAGAAGGAGGTACCAATCCATCCTTGAAGAAAGTAAAATCACCATCGACCAGTCGAAGTTCTTCTAAAAAGAAAGTGAATACGGTCTCCATTCGTCGATCAGAGCGTATACAAAATTCTACGCCTCTAAACTTCAAAATACAAAACGTCATTGAAGAGATTAATCTTAGTGAAAGTGATAAAGAAGATGAGTTACCTACTGACCATGAGAAAAGTTCTCCATCTCCCAGCAAAGAGAATGGTTGGCCAGAGTTAATGATGGGGACAAGGAGGTTTGAAGCTAAAATTGACTATATTCTTAAACTATTCGAAACACATGGCCATACCTTAGACTCAATAAAGACAGAGGTAATCAAGCGATCGTTCTTAACCGAAACGGTACCTACGCCTGATATGAATTACAAGAGCATGTATATAGCTTCCCAGAAAAAGATTGAAGAACTAGCTGAAGAAAATCGAGTGCTTACGAAAAAGTTGGAGAATGCTCACGAACTATTTGAAGCGTACAAGAACGGGAATCGTGATGCTTTTGAAATGTTGGAGAAGTTGAAGGACGTCGTTTTGATCTCGAACGGTTTGAGAGCTTCTGAATCGACTCAAGCTACGTCTCAAGTCGAACCCGACAAGGTTCCGGGTCTCGACGCTGACAATGTACCTCCTTCAAGCAAGAGAAAGAAGCTCACTAAACAAAAATGAACTTGAATGTGAGTTACCTCTTGATGCTTATAACTCCTCCCTCGCTTGCTTACTCTTCAGTTAAGACTTCTTTATGTTGCTGTTCTTTGTTTGTTGGACTATACAATAGAATGGTGGCCCTTAAAATATATTAAATTATAAATTGGCGAGCTTAAA ATGAGGAACAAATCGCAGGCGGCAAAATCTGGGGAGAATGCAGAATTGAGCACAGAAGCAACACACGAAAGCACAATGACACCATCTGAGAGATCAGAAGGAGGTACCAATCCATCCTTGAAGAAAGTAAAATCACCATCGACCAGTCGAAGTTCTTCTAAAAAGAAAGTGAATACGGTCTCCATTCGTCGATCAGAGCGTATACAAAATTCTACGCCTCTAAACTTCAAAATACAAAACGTCATTGAAGAGATTAATCTTAGTGAAAGTGATAAAGAAGATGAGTTACCTACTGACCATGAGAAAAGTTCTCCATCTCCCAGCAAAGAGAATGGTTGGCCAGAGTTAATGATGGGGACAAGGAGGTTTGAAGCTAAAATTGACTATATTCTTAAACTATTCGAAACACATGGCCATACCTTAGACTCAATAAAGACAGAGGTAATCAAGCGATCGTTCTTAACCGAAACGGTACCTACGCCTGATATGAATTACAAGAGCATGTATATAGCTTCCCAGAAAAAGATTGAAGAACTAGCTGAAGAAAATCGAGTGCTTACGAAAAAGTTGGAGAATGCTCACGAACTATTTGAAGCGTACAAGAACGGGAATCGTGATGCTTTTGAAATGTTGGAGAAGTTGAAGGACGTCGTTTTGATCTCGAACGGTTTGAGAGCTTCTGAATCGACTCAAGCTACGTCTCAAGTCGAACCCGACAAGGTTCCGGGTCTCGACGCTGACAATGTACCTCCTTCAAGCAAGAGAAAGAAGCTCACTAAACAAAAATGA MRNKSQAAKSGENAELSTEATHESTMTPSERSEGGTNPSLKKVKSPSTSRSSSKKKVNTVSIRRSERIQNSTPLNFKIQNVIEEINLSESDKEDELPTDHEKSSPSPSKENGWPELMMGTRRFEAKIDYILKLFETHGHTLDSIKTEVIKRSFLTETVPTPDMNYKSMYIASQKKIEELAEENRVLTKKLENAHELFEAYKNGNRDAFEMLEKLKDVVLISNGLRASESTQATSQVEPDKVPGLDADNVPPSSKRKKLTKQK
BLAST of Carg07247-RA vs. NCBI nr
Match: XP_022953278.1 (uncharacterized protein LOC111455873 isoform X2 [Cucurbita moschata]) HSP 1 Score: 476.1 bits (1224), Expect = 7.7e-131 Identity = 258/262 (98.47%), Postives = 258/262 (98.47%), Query Frame = 0
BLAST of Carg07247-RA vs. NCBI nr
Match: XP_023548731.1 (uncharacterized protein LOC111807298 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 475.3 bits (1222), Expect = 1.3e-130 Identity = 257/262 (98.09%), Postives = 258/262 (98.47%), Query Frame = 0
BLAST of Carg07247-RA vs. NCBI nr
Match: XP_022953277.1 (uncharacterized protein LOC111455873 isoform X1 [Cucurbita moschata]) HSP 1 Score: 470.7 bits (1210), Expect = 3.2e-129 Identity = 258/265 (97.36%), Postives = 258/265 (97.36%), Query Frame = 0
BLAST of Carg07247-RA vs. NCBI nr
Match: XP_023548730.1 (uncharacterized protein LOC111807298 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 469.9 bits (1208), Expect = 5.5e-129 Identity = 257/265 (96.98%), Postives = 258/265 (97.36%), Query Frame = 0
BLAST of Carg07247-RA vs. NCBI nr
Match: XP_022992545.1 (uncharacterized protein LOC111488838 isoform X2 [Cucurbita maxima]) HSP 1 Score: 453.0 bits (1164), Expect = 7.0e-124 Identity = 247/262 (94.27%), Postives = 251/262 (95.80%), Query Frame = 0
BLAST of Carg07247-RA vs. TrEMBL
Match: tr|A0A0A0K4Z7|A0A0A0K4Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G389470 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 2.9e-86 Identity = 186/260 (71.54%), Postives = 208/260 (80.00%), Query Frame = 0
BLAST of Carg07247-RA vs. TrEMBL
Match: tr|A0A1S3BSE3|A0A1S3BSE3_CUCME (uncharacterized protein LOC103492673 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492673 PE=4 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 1.4e-72 Identity = 163/236 (69.07%), Postives = 181/236 (76.69%), Query Frame = 0
BLAST of Carg07247-RA vs. TrEMBL
Match: tr|A0A1S3BS36|A0A1S3BS36_CUCME (uncharacterized protein LOC103492673 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492673 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 8.3e-57 Identity = 149/262 (56.87%), Postives = 164/262 (62.60%), Query Frame = 0
BLAST of Carg07247-RA vs. TrEMBL
Match: tr|A0A1S3BQQ2|A0A1S3BQQ2_CUCME (uncharacterized protein LOC103492673 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492673 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 1.1e-32 Identity = 104/200 (52.00%), Postives = 117/200 (58.50%), Query Frame = 0
BLAST of Carg07247-RA vs. TrEMBL
Match: tr|A0A2I4FZD4|A0A2I4FZD4_9ROSI (uncharacterized protein LOC109003356 isoform X4 OS=Juglans regia OX=51240 GN=LOC109003356 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 7.9e-23 Identity = 80/206 (38.83%), Postives = 124/206 (60.19%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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