Carg07243-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCAAGTCTCTGAATCTAGAGAGAGAAACAAAAGCTTCACTTCCATGGCTGCCGAGGAACTTCGTGTAGAAGAAGCAATGTCATGGCTTCCTAGTCAAGTTCTTGACGAGGCTTGCGATATCAAGGTTTTTCACTACTTCTACTTCTACTTCTCTTAATTCCTCGACTAATTTTCTTTTTCAGTTCTGTTTTCTGTTTGTTTCTCAGGAAAACAAAATTTTCCGAGAAAAGTTTTAAGTTCCGTGTTAAATTTTCTTTGCCGCTTCTTTTTTTATGATCATCAGGTGTATATGAGGCAACACCACCACAAACAACAACCGTACTTCCTCCAGCGGCAACGGCGCCACGATCGTCCTCTGTTATCGTCTTCTGATTTCGCTCTTTCATCGGTACGATACTGTTACAGTTTGATCGCGATTTTAATTTCTTCACGCACTAGGTTACGATTTCGACTGTGTTCTTGATTTTTTTGTTTTTGATTCGGTGAAATTGAATTAGAATCAGAAATCGAAGTTCAGTAATGTCTCTTCTCTGCCGCACCAGCGGCAAAAACCAGCGGTTTCCGCGGCGAATTGGACGGCTGGAGGACATGGAATGCAAGCAATCTTCCTCGATTGTGGGCGGCAATTAGGAGGCACCGGCGTTTTTCTTCCTCGAGGAACGGGCGGCACCAATTACCAACCAAACAAGAAGCCAGGTACGATTCCGATTAATCTTTTAATTAATCAATAATGATTCCAATGAGATATTAAAAAATGAAAAAACAAAAACAAGGAAGAATTCTGTATTCGTGCGTACCCGTTTCTGCTTCTCTCTCTCTGTTTTCAATCAATTAATGGAAAAACGACGAAGAAGAAACAGAGAGAGAAAGGAATTTGCCTCTTCATTCCTCGTTTTAATTAATATAACTAGAATTTTATTGTTCATATTGAATTAAAAATGAGATTCTGGGAACTACATGTCATAATCAAATGAAAATCAACTGATTGTAAATATAATATATATTCTTTGAATTTCATCTTATGAACCTCTAATTCTCAATTGATTATGAAATCCTTATAAATATTTAGATATTCCGTCTTAAAATTCGGCTTCCACAATAATAGATCAAACAAAATTTTATGTTTATCTAATAAATTTTATGTTAGTGTGATTATCCAGTACATTGAACTATGAAATGTGACTGATATTGGTAATGAACTATGAAATTTGACTAAAGTTGGATCTAAATTGAGTATTCTTTGAATTATTCTTATTCTTTTGTTGTCATTATCAACTACTTTTGAGATAATACTTTGTGTTTATCTAATACAGTCTCAAATTCACTATTAGTTTGCTATCGTATTAAATAAGAATATATACTAAATAAATATTCAATGATAATATAATACATGTAGTTTACGAAACTAAAGTAATTTAGAGTGGAAATAATAGTTACCATAAAAATGATTTTGTGTTATATATATGTCAACAAACTCTTACTATATAAGGTCATATTAATGTATTTTATAGATTTAGGATTTAGGACATGTTTAGAAAGTTGCTTTTAAAATAGGTTTTGTTAGGGATTAAATTAATTAAAATACCTGTGAAGGATTTAGATAAAATTCCAAAATATCCTTAAATTAAAATAATAATAATAATAATAATAATAATAAATGTTAAAAAAATACTTAATATGATTTTAAAAATACTCTTTTTAACTTTTAAAACTATTTAGAAAATACTATTAATTTTTTTTAAAAACTTAAAAGACGTCTTTAAGATTTTTTAAAAAATTAAAAAATATTCTACCAATTAATTTAAAATAAATAAATAAATAAATAATCTATGAAGTATTAATGGTTTTCGTCAGTATAGTGAAAAAAAATATATTTTTTTTAATAAATATAAAGAGGGTTAATAATAATTTTAAAAGTTGGTGGGTATTTTTTAAATATAGTATTATATGAGTATTTTATTATTATTATTATTATTTTAAAAATTTAAAGGTATTTTTAAAGTTTTTAAATAAAATAGTAATAGTTTTGTGTAATACTTTATATATATTTTTAATTTTTTTTAGTTCAAAGATATGGTTGAAATTTTAAGTTTATATCTATTTTTTTTTTTAGAATCTAAAAAGTTTAGAGATATTTTTGTTATTTTACCAATAAATTACAACATAAATTTAAATATTTTCTAAACGTTTAATTTATTCATTTTTGTGTGTTATCTAAAAAACGTTGACATTTTCTAAATGTTTAATTAATTTAATTTTTTCAAGTGTATTATGTTGCATCTTTTTATAGTAGGTAAAATCTAATACAAAATTTTTGTTATAAATTATTGAGATAATTAAAAATTTTTGTTATAAATTATTGAGATAATTATTTGTTAAAACTTTATGACGTATTATATAAGGACCAATAATAAGATTCCTAATTTTAGACTGAAAATGGTAAAATATTTGTAGCTTGCTCTATGGTTCTGGTCCCTGCTCGTGTTGTTCAAGCTCTTAATCTCGATGTGCAAGCACTAGGACTGCAAATTTCCCCCCGCAAAGGTATGCTCATGTATTTTCTAAATTCCTATTACATGTAAACTAAATGGCACGTTTGAAACACTTTTAAAAGTTTAAGAATGTTTTTTAAATAAAATATTAACGGGTTCTAAGAATTTTTTAAAATGGTGAAGGGCATTTTTGGTATTATTGAAAATTTAGTAATATTTTAGAGATAATGTTGAAATTTTGAGAGTATTTTTTTTTAATTAATTTAAATATTGTTATTCTAAAATATTTTATTAACAAAAAATGATTTGGTACGACTTATTACAGATCCCAAAATTAATCAAAATGGTAGAGAATGCAACTCGATGGTAAAAAATAAGAAGGGCAAAGATGTAAAATGCTCCTTCGTGTCCCGAAATCAAGCCCATTCATCCCAAGAGATATTCCTTCCAAAAGAATGGACCTATTAA CTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCAAGTCTCTGAATCTAGAGAGAGAAACAAAAGCTTCACTTCCATGGCTGCCGAGGAACTTCGTGTAGAAGAAGCAATGTCATGGCTTCCTAGTCAAGTTCTTGACGAGGCTTGCGATATCAAGGTGTATATGAGGCAACACCACCACAAACAACAACCGTACTTCCTCCAGCGGCAACGGCGCCACGATCGTCCTCTGTTATCGTCTTCTGATTTCGCTCTTTCATCGAATCAGAAATCGAAGTTCAGTAATGTCTCTTCTCTGCCGCACCAGCGGCAAAAACCAGCGGTTTCCGCGGCGAATTGGACGGCTGGAGGACATGGAATGCAAGCAATCTTCCTCGATTGTGGGCGGCAATTAGGAGGCACCGGCGTTTTTCTTCCTCGAGGAACGGGCGGCACCAATTACCAACCAAACAAGAAGCCAGATCCCAAAATTAATCAAAATGGTAGAGAATGCAACTCGATGGTAAAAAATAAGAAGGGCAAAGATGTAAAATGCTCCTTCGTGTCCCGAAATCAAGCCCATTCATCCCAAGAGATATTCCTTCCAAAAGAATGGACCTATTAA ATGGCTGCCGAGGAACTTCGTGTAGAAGAAGCAATGTCATGGCTTCCTAGTCAAGTTCTTGACGAGGCTTGCGATATCAAGGTGTATATGAGGCAACACCACCACAAACAACAACCGTACTTCCTCCAGCGGCAACGGCGCCACGATCGTCCTCTGTTATCGTCTTCTGATTTCGCTCTTTCATCGAATCAGAAATCGAAGTTCAGTAATGTCTCTTCTCTGCCGCACCAGCGGCAAAAACCAGCGGTTTCCGCGGCGAATTGGACGGCTGGAGGACATGGAATGCAAGCAATCTTCCTCGATTGTGGGCGGCAATTAGGAGGCACCGGCGTTTTTCTTCCTCGAGGAACGGGCGGCACCAATTACCAACCAAACAAGAAGCCAGATCCCAAAATTAATCAAAATGGTAGAGAATGCAACTCGATGGTAAAAAATAAGAAGGGCAAAGATGTAAAATGCTCCTTCGTGTCCCGAAATCAAGCCCATTCATCCCAAGAGATATTCCTTCCAAAAGAATGGACCTATTAA MAAEELRVEEAMSWLPSQVLDEACDIKVYMRQHHHKQQPYFLQRQRRHDRPLLSSSDFALSSNQKSKFSNVSSLPHQRQKPAVSAANWTAGGHGMQAIFLDCGRQLGGTGVFLPRGTGGTNYQPNKKPDPKINQNGRECNSMVKNKKGKDVKCSFVSRNQAHSSQEIFLPKEWTY
BLAST of Carg07243-RA vs. NCBI nr
Match: XP_023548800.1 (uncharacterized protein LOC111807346 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 337.8 bits (865), Expect = 2.2e-89 Identity = 173/205 (84.39%), Postives = 174/205 (84.88%), Query Frame = 0
BLAST of Carg07243-RA vs. NCBI nr
Match: XP_022953989.1 (uncharacterized protein LOC111456382 isoform X1 [Cucurbita moschata]) HSP 1 Score: 335.5 bits (859), Expect = 1.1e-88 Identity = 172/205 (83.90%), Postives = 173/205 (84.39%), Query Frame = 0
BLAST of Carg07243-RA vs. NCBI nr
Match: XP_023548801.1 (uncharacterized protein LOC111807346 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 328.9 bits (842), Expect = 1.0e-86 Identity = 171/205 (83.41%), Postives = 172/205 (83.90%), Query Frame = 0
BLAST of Carg07243-RA vs. NCBI nr
Match: XP_022953990.1 (uncharacterized protein LOC111456382 isoform X2 [Cucurbita moschata]) HSP 1 Score: 326.6 bits (836), Expect = 5.0e-86 Identity = 170/205 (82.93%), Postives = 171/205 (83.41%), Query Frame = 0
BLAST of Carg07243-RA vs. NCBI nr
Match: XP_023548802.1 (uncharacterized protein LOC111807346 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 300.1 bits (767), Expect = 5.1e-78 Identity = 158/205 (77.07%), Postives = 159/205 (77.56%), Query Frame = 0
BLAST of Carg07243-RA vs. TrEMBL
Match: tr|A0A0A0KAI7|A0A0A0KAI7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390020 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 1.4e-60 Identity = 139/213 (65.26%), Postives = 151/213 (70.89%), Query Frame = 0
BLAST of Carg07243-RA vs. TrEMBL
Match: tr|A0A1S3BS46|A0A1S3BS46_CUCME (uncharacterized protein LOC103492680 OS=Cucumis melo OX=3656 GN=LOC103492680 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 6.6e-58 Identity = 135/214 (63.08%), Postives = 153/214 (71.50%), Query Frame = 0
BLAST of Carg07243-RA vs. TrEMBL
Match: tr|A0A2P4JX29|A0A2P4JX29_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_49441 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 3.2e-20 Identity = 89/210 (42.38%), Postives = 102/210 (48.57%), Query Frame = 0
BLAST of Carg07243-RA vs. TrEMBL
Match: tr|A0A2P5C2Q6|A0A2P5C2Q6_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_189800 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 5.1e-18 Identity = 85/215 (39.53%), Postives = 108/215 (50.23%), Query Frame = 0
BLAST of Carg07243-RA vs. TrEMBL
Match: tr|I1JFB0|I1JFB0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786285 PE=4 SV=2) HSP 1 Score: 99.0 bits (245), Expect = 1.1e-17 Identity = 77/202 (38.12%), Postives = 98/202 (48.51%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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