Carg07073-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAAGAGATCGCAGATCGGAAGGCCACCGTCATCAATGAAGTCCAAGAAAACAACGACGGAGAATCCGAAGAAATTACCGAGAGAGAGAGTACAAGAAAGGAGGAAGAGCATCCACTTCCACTGATGGCGCTCAATCACGTCTCCAGAGTGTGCAGAAGCGTCAAGGATTCCGTCGATTTCTACACCAAGGTCCTAGGGTTTGTCCTGATCGAGAGGCCGCAGAGCTTCGATTTCGAAGGCGCTTGGTTATTCAACTACGGCGTCGGGATTCACTTGATGCAATCCGAGGACGAAGATAATGGAGTTCGTCAAGGCGATAAGGACCATCTGGATCCGTTGGACAACCACATCTCGTTTCAGGTCAGTTTCTGAATTAAAAAATCGCAAAGAAAACTTTGAATACATTTTAGGTTTTTGTTTCTTGAAATTGAAGTATGGCAGTGTCTGAAGGTGGTTCCGGCGGGTTCATCCGGCAGGATCAGGCTTCCGGCCGGTCGCCACAACCCTCCATTGGAATCGAATGGACAGAAATAG ATGGAAAAAGAGATCGCAGATCGGAAGGCCACCGTCATCAATGAAGTCCAAGAAAACAACGACGGAGAATCCGAAGAAATTACCGAGAGAGAGAGTACAAGAAAGGAGGAAGAGCATCCACTTCCACTGATGGCGCTCAATCACGTCTCCAGAGTGTGCAGAAGCGTCAAGGATTCCGTCGATTTCTACACCAAGGTCCTAGGGTTTGTCCTGATCGAGAGGCCGCAGAGCTTCGATTTCGAAGGCGCTTGGTTATTCAACTACGGCGTCGGGATTCACTTGATGCAATCCGAGGACGAAGATAATGGAGTTCGTCAAGGCGATAAGGACCATCTGGATCCGTTGGACAACCACATCTCGTTTCAGTGTCTGAAGGTGGTTCCGGCGGGTTCATCCGGCAGGATCAGGCTTCCGGCCGGTCGCCACAACCCTCCATTGGAATCGAATGGACAGAAATAG ATGGAAAAAGAGATCGCAGATCGGAAGGCCACCGTCATCAATGAAGTCCAAGAAAACAACGACGGAGAATCCGAAGAAATTACCGAGAGAGAGAGTACAAGAAAGGAGGAAGAGCATCCACTTCCACTGATGGCGCTCAATCACGTCTCCAGAGTGTGCAGAAGCGTCAAGGATTCCGTCGATTTCTACACCAAGGTCCTAGGGTTTGTCCTGATCGAGAGGCCGCAGAGCTTCGATTTCGAAGGCGCTTGGTTATTCAACTACGGCGTCGGGATTCACTTGATGCAATCCGAGGACGAAGATAATGGAGTTCGTCAAGGCGATAAGGACCATCTGGATCCGTTGGACAACCACATCTCGTTTCAGTGTCTGAAGGTGGTTCCGGCGGGTTCATCCGGCAGGATCAGGCTTCCGGCCGGTCGCCACAACCCTCCATTGGAATCGAATGGACAGAAATAG MEKEIADRKATVINEVQENNDGESEEITERESTRKEEEHPLPLMALNHVSRVCRSVKDSVDFYTKVLGFVLIERPQSFDFEGAWLFNYGVGIHLMQSEDEDNGVRQGDKDHLDPLDNHISFQCLKVVPAGSSGRIRLPAGRHNPPLESNGQK
BLAST of Carg07073-RA vs. NCBI nr
Match: XP_022953340.1 (lactoylglutathione lyase [Cucurbita moschata]) HSP 1 Score: 251.1 bits (640), Expect = 2.3e-63 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of Carg07073-RA vs. NCBI nr
Match: XP_022991929.1 (lactoylglutathione lyase [Cucurbita maxima]) HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61 Identity = 121/123 (98.37%), Postives = 121/123 (98.37%), Query Frame = 0
BLAST of Carg07073-RA vs. NCBI nr
Match: XP_023548789.1 (lactoylglutathione lyase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 243.8 bits (621), Expect = 3.7e-61 Identity = 120/123 (97.56%), Postives = 120/123 (97.56%), Query Frame = 0
BLAST of Carg07073-RA vs. NCBI nr
Match: XP_004136133.1 (PREDICTED: uncharacterized protein LOC101214301 [Cucumis sativus]) HSP 1 Score: 206.5 bits (524), Expect = 6.6e-50 Identity = 116/207 (56.04%), Postives = 134/207 (64.73%), Query Frame = 0
BLAST of Carg07073-RA vs. NCBI nr
Match: KGN45087.1 (hypothetical protein Csa_7G420800 [Cucumis sativus]) HSP 1 Score: 206.5 bits (524), Expect = 6.6e-50 Identity = 116/207 (56.04%), Postives = 134/207 (64.73%), Query Frame = 0
BLAST of Carg07073-RA vs. TAIR10
Match: AT2G28420.1 (Lactoylglutathione lyase / glyoxalase I family protein) HSP 1 Score: 136.3 bits (342), Expect = 1.5e-32 Identity = 73/155 (47.10%), Postives = 87/155 (56.13%), Query Frame = 0
BLAST of Carg07073-RA vs. TAIR10
Match: AT1G80160.1 (Lactoylglutathione lyase / glyoxalase I family protein) HSP 1 Score: 107.1 bits (266), Expect = 9.9e-24 Identity = 47/90 (52.22%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of Carg07073-RA vs. TAIR10
Match: AT1G15380.1 (Lactoylglutathione lyase / glyoxalase I family protein) HSP 1 Score: 100.5 bits (249), Expect = 9.3e-22 Identity = 46/90 (51.11%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of Carg07073-RA vs. TrEMBL
Match: tr|A0A0A0K9N2|A0A0A0K9N2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420800 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 4.4e-50 Identity = 116/207 (56.04%), Postives = 134/207 (64.73%), Query Frame = 0
BLAST of Carg07073-RA vs. TrEMBL
Match: tr|A0A1S3CFR4|A0A1S3CFR4_CUCME (metallothiol transferase FosB OS=Cucumis melo OX=3656 GN=LOC103499962 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.7e-49 Identity = 113/205 (55.12%), Postives = 131/205 (63.90%), Query Frame = 0
BLAST of Carg07073-RA vs. TrEMBL
Match: tr|A0A2N9IZ78|A0A2N9IZ78_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58084 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.9e-38 Identity = 91/188 (48.40%), Postives = 113/188 (60.11%), Query Frame = 0
BLAST of Carg07073-RA vs. TrEMBL
Match: tr|A0A1U8BQM5|A0A1U8BQM5_NELNU (uncharacterized protein LOC104613472 OS=Nelumbo nucifera OX=4432 GN=LOC104613472 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 6.6e-38 Identity = 88/169 (52.07%), Postives = 100/169 (59.17%), Query Frame = 0
BLAST of Carg07073-RA vs. TrEMBL
Match: tr|A0A166GRK9|A0A166GRK9_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_001920 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34 Identity = 88/173 (50.87%), Postives = 102/173 (58.96%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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