Carg06486-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCTTTTTTTGTCGCAAGGCGTGAATTTATCTCTCTTTCGGTTCCGGAACCGGCGAAGGACTTCCATGGACGACGGAATCTCAGAGGAGCTGGTGATGAGTGAGGTTCACCTTGGCTGCCCGCCGGGTTTTTCCGGGTCGTTTGTTTCCAATTTCACCATTTCCCTCCCTTCTGGTTCGTAATTCCATGCTTTCTCTGATTATCTCTTCCATTTTGGTATTGAACTTCAAAGCTGTTCCATTAGCTTGGCACTGCCTAGCACTTAACCATTTTCAGTTTTGTAATTAATGGCGGATGATAATAAGATTACTGACAAAATTATAGGTTTTGATGATTTAGATACAGAACCCAGAACCTATGTCAGTGATTCTGAAGGCTATTCACCACCGTCTACAAAGCAACTCATTCGTTTCGACGAAGATGGAGATCTTGTTTTACCCAGGCGCCTTAGTCAGTACCCAACACCTCTCTTCTAAGTTAATCATGAGTTTATAAGTTAGGAATACATATTCATTGATATGAGGCCTTTTGGGAAAACCAAAAGTAAAACTACGAGAGCTTATGCTCAAAGTAGACAATATCATACCATTGTAGAGAGTCGTGGTTTTTAACATGGTACTAAAGCCATGCCATTAACTTAGCCATGTCGATAGAATCCTCAAATGTCGAACAAAGAAGTTTTGAGCCTCGAAGGTGTAGTCAAAAGAAGTTTTTAGCCTTTGTTCGAGGGCTCCAGAGAAGGAGTCGAGCCTTAATTAAAAGAAGATTGTTTGAGGGCTTCATAGGCCTCATGGGAGGCTCTATGATGTGCTTTGTTCAAGGGGAGGATTGTTGAAGATTGTTGGAGAGGAGTCCCACGTCAGTTAATTAAGGGGTTGATCATGGATTTATAAGTAAGGAATACATGTCCATTGGTACAAGGCTTTTTAGAAACCAAAAGCAAAGCCATGAGAGCTTATGCTCAAATGAACAATATCATACCATTGTGGAGAGCTGTGATTTCTAACATACAAGTACCATATAGAGTACCCAAATTTCTTATGCTTTTTGCATTCTTGCATATAGTAATTTATGATTGCATTTTAAAGAGATCTGGAAAATTAAGTTAACTTTTTTAATGAACGCATAATTTCTTTCCTTTGAGTCAAAGTGTTCACAGTTGTTGTTAGGCAGTAATGCGAGCAGCTGATTATAAGCTATGTAACGCATTTCATCAAATGCCCGAACTGACCAAGAGGCTACACGATCACAATTACTTGCTGTGCTAGTAATTGATCTGTTATGAATGCAAATTTTACATCTCTCAGTTAAATCCCTTGCATTGTTCCCACTTGAAAATATTTAAATTGAAAATGTGAGTGTTAAAACACTCAATATCCCATCAGTTATTTAATTGCTGAAATGCTGTAACATTTCTATATGAAAACAGATGTGGAAGTAGAACCTTCAGTTCGTAGTTATAACGTGTCGATCCAACATGATATTATGTCAACGATCCCAAGTGTTGGTTTGCAGGTAATTGTTTCTTTCGATCTGTGATCTTATCCATTATTTTTTTTATTCATTTTATGATTCAGTGTCTTTCCTCTTTCAGGTGTGGAAAGCAGAACTAGTATTATCTGATTTTGTCTTGCATACAATGCTTACTTCGTCTAAATTCGATGGAATTGTTGCTCTAGAACTTGGAGCTGGAACAGGTGTTTGACGGACATGCATTCGTGATATTTATTTTTATGCACATTTGTTATTTTTCTGATTCCTACCATTTTGTATTAACGTACTGTTAGATGAAACAAATTTTCCTTTTTTTTCTTTTTTGAAAGAACCACCGTTGACTATATTACTATTTCAATGACAGGGTCTTATCTTGTTCCTCTTGCCAGGACTGGTTGGAATATTGCTTGCACGGGTTGCTAAAACAGTATTTCTAACAGGTATCGGCTATAGCAATCCTCAGAAATTTTGATTTTTTGTTATTCCTTGTTTTCCCATTTTGTAAATGAAACAATCTGATGATCTTGAGTTTCTCTTATAGTTTGATCTTGTTCTGTTCTGATGGATTGAGAAATGTGTGAGCGTGCACACTTTTCTCTTAACATGAAAACCAAAGTAAACTTAACAGTAACAGTCCAAGCCCACCGCTAGCCCACCGCTAACAGATATTATCCTCTTTGGGTTTAACCTTTCAGGCTTCCCCTCAAGGTTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCCCCTTCTCTAGCCGACGTGGGATCTCACAATTTATGTCTTTAAATATTAGTCAAATAAACCTGTAACTGCCTCTCATAGCTCACATATGTTTTAGTCGGATTAGTTGTGAGTAATAATTAGCTTAGAGGCTTATCTAACTTGTTTTTAACGTATGGATCCATTTCAAGTATTTTTAATGCGAAGGATGTGCTCTTAATGATTGACAGATAAAGGCGATCATATTCTTGACAACTGTGCCAAAAACATTGGTCTTAATTCTGGTGGATTCAGTGCTGGAGTTGCAGTTCATGTAAGGGAACTTGATTGGACAGAACCTTGGCCTCCAAAGCAAACCCGAGGAGAATGTCACCCAAATAACAGGTGATGAAAGCTTTGCAATTCACTATACCTGACAACTGTATGCCTTGGACTATGTTCATTTTTTCTCCCCATAAATGTGTGATTGGTATGTGACTTTAAATTGTTTAGCGATCACTGCAAGTGTTTCTTTTTTCACATTGGTAATATTTGTTTAAATTTTACATAGTGGTAAAAGTTGTTTTTGACCAAATAAAAAAATTTCTAAAACACTTCTTAATAACCCAAAGTGATTTGAGGAATTCTAAAAATAGATTAAAGTAAAACGGTTGAAATGATTTTAGATGAAACATGTAACAGCTCAAGCTCACCGCTAGCAGATAATGTCCTCTTTGAGCTTTCCTTTTCGAGATTCTCCTCAAAGTTTTTAAAATGCATATGTTAGGTAGAGATTCTACACCCTTCGGGGCCTAGCATCCTCGCTTACACTTGTTCCCTTCTCTAATCAATGTGGGACCTCCAATCCACTCCCTTCGAGGCGCAGCGTCCTTGCTAGCACTCATTCCCTTTCTCCAATCAATGTGGGACCCCTCAATCCACCCCCTACCCCTCAATCCACCCCTTCGGAGCCTAGCATCCTTGTGTTAAGTGTTCTTGGATGGAAGGGGACTTTTGAATTTCCTCGGGTGATTGCCATAAATCATCAATAAGTAAGTTTTTAAGTATATACTTCTTTCAAAAGGCTGCCGAACACACACTAAGCAATCTAAGACTTGTGCTCGTGGGTCCGGACTCATAGAACATAAAGTAACTGACGTTTCTTTTCTGGTGCCTTCATCGTCATACAGGTATTCCTGGGCCTTATCAGAGGTTGAAGAGGCACAGGGAGCCTGCTTACTTGTTGCTGCCGATGTTATCTATAGTGACGACTTGACAGATGCGTTTTTTAGTATCTTAGAGAAGTTTATGTCTCAAGGTTCAGAAAAGGTACGCATTCTCATGTTGAGATTATTATATTTTATTTGAGGTCTCCAATTGATGGGTTAGGTTAGTAGATAATGAAATATGCCTTTCATTTTATTTTTATATGGAAAAGATGCTAATCATTGACCATATGTAAAAGGACAAATGATATGAACAAACATTTGCTTGAAATAATGCATTATTAGGCAAGGGACATGAAATTTGTATATATATGTGGGGCCTTATATTCTACCACATTTCCTCGTTGATCCTCATTTGAGGAGACGGAGATGAAACCATTGGGGTTGACCCGAAATCACTTATTGATTCTTTGTAGCTAAGTTAGGCATCATGGAGTTGCAAGGAAACTTACTGCCAATCATTTACTCATCGTCAACCTGAGCATATTTCAACTAGTTAAGACGCATATTTCAACTAGTTAAGACATATTATTCTCAATCTAACCCACGTTGAACTCAAAACGAGACCTCTTACCTACTTTTCTTTGGAATTAATTACCTACTTTTCTTTGGAATTATGTAGCGAGCTCATGTATTGTCTTGGCTGAAACCATGAGGATGAGTAGCTATTGCGAAGTTTGGTTAATGTTTTGGTTGAACGTCAAATACATGTAATGTTAGATGAATTAATTATCACTTGTACCAAACCCACCAGGTGTTGTATTTGGCTTTGGAAAAGCGCTATAACTTCACTCTGAATGACTTTGACATTGTAGCAAATGGCTATTCTCATTTCCTAAGTTACCTGAAACATGAAGACGGTAAGTGACAGTGACATTCAGCACGTATCTCCGCCTTAAATGTTTCTAACTCGAGCTCATGTTCTACTTTTGGTACTCGACAGATTATTCCAAACACAGCAGATTGCAGCAGGAATCAAAACCATGTTTTATAGGCAACCGCATTGATCTCGCAAACATCCCACAATATGTCCTCAACTATGAAAGAGGGGAAGATGTAGAAATCTGGCAGATCAAGTATTGTAGGAAAGAGTCTTGAGATCAGAGAAGGGCCATGAACATCTGCTGTAGAACTCACAAATAGTTGCCTGCATTCATAACTCTGGTGAGTTTTCCCTTCAAAACTTCACCAAGAAAATGGGTATCAGTTATCACAGAACAAGAACTGAAGATATGAAATAATCTCAGTTCTAATTCTGTATTTTCTTCATTTCGTTTCACAATCTTCCTAATATTTTTTCGTCGTGAGGATTGATTTTGCCATTATAGATCTTTTGGAAAAATCTCAGGGTTATAATACTCAGTAATAATGGTATTTTTTTTTTTTAATATTTTTATTTGTAGGTAGAAGATTGAAGCATTGACCTTTGAATGATATGATGAATGATAGGGATGATAATTAGTTCATTTGTGGTATTGGCTTGAAGTATTATAAACAATGTTATGAGATATATGATGAGTAGCATTTGGCATTTAAAATTG TTTTCTTTTTTTGTCGCAAGGCGTGAATTTATCTCTCTTTCGGTTCCGGAACCGGCGAAGGACTTCCATGGACGACGGAATCTCAGAGGAGCTGGTGATGAGTGAGGTTCACCTTGGCTGCCCGCCGGGTTTTTCCGGGTCGTTTGTTTCCAATTTCACCATTTCCCTCCCTTCTGGTTTTGATGATTTAGATACAGAACCCAGAACCTATGTCAGTGATTCTGAAGGCTATTCACCACCGTCTACAAAGCAACTCATTCGTTTCGACGAAGATGGAGATCTTGTTTTACCCAGGCGCCTTAATGTGGAAGTAGAACCTTCAGTTCGTAGTTATAACGTGTCGATCCAACATGATATTATGTCAACGATCCCAAGTGTTGGTTTGCAGGTGTGGAAAGCAGAACTAGTATTATCTGATTTTGTCTTGCATACAATGCTTACTTCGTCTAAATTCGATGGAATTGTTGCTCTAGAACTTGGAGCTGGAACAGGACTGGTTGGAATATTGCTTGCACGGGTTGCTAAAACAGTATTTCTAACAGATAAAGGCGATCATATTCTTGACAACTGTGCCAAAAACATTGGTCTTAATTCTGGTGGATTCAGTGCTGGAGTTGCAGTTCATGTAAGGGAACTTGATTGGACAGAACCTTGGCCTCCAAAGCAAACCCGAGGAGAATGTCACCCAAATAACAGGTATTCCTGGGCCTTATCAGAGGTTGAAGAGGCACAGGGAGCCTGCTTACTTGTTGCTGCCGATGTTATCTATAGTGACGACTTGACAGATGCGTTTTTTAGTATCTTAGAGAAGTTTATGTCTCAAGGTTCAGAAAAGGTGTTGTATTTGGCTTTGGAAAAGCGCTATAACTTCACTCTGAATGACTTTGACATTGTAGCAAATGGCTATTCTCATTTCCTAAGTTACCTGAAACATGAAGACGATTATTCCAAACACAGCAGATTGCAGCAGGAATCAAAACCATGTTTTATAGGCAACCGCATTGATCTCGCAAACATCCCACAATATGTCCTCAACTATGAAAGAGGGGAAGATGTAGAAATCTGGCAGATCAAGTATTGTAGGAAAGAGTCTTGAGATCAGAGAAGGGCCATGAACATCTGCTGTAGAACTCACAAATAGTTGCCTGCATTCATAACTCTGGTAGAAGATTGAAGCATTGACCTTTGAATGATATGATGAATGATAGGGATGATAATTAGTTCATTTGTGGTATTGGCTTGAAGTATTATAAACAATGTTATGAGATATATGATGAGTAGCATTTGGCATTTAAAATTG ATGGACGACGGAATCTCAGAGGAGCTGGTGATGAGTGAGGTTCACCTTGGCTGCCCGCCGGGTTTTTCCGGGTCGTTTGTTTCCAATTTCACCATTTCCCTCCCTTCTGGTTTTGATGATTTAGATACAGAACCCAGAACCTATGTCAGTGATTCTGAAGGCTATTCACCACCGTCTACAAAGCAACTCATTCGTTTCGACGAAGATGGAGATCTTGTTTTACCCAGGCGCCTTAATGTGGAAGTAGAACCTTCAGTTCGTAGTTATAACGTGTCGATCCAACATGATATTATGTCAACGATCCCAAGTGTTGGTTTGCAGGTGTGGAAAGCAGAACTAGTATTATCTGATTTTGTCTTGCATACAATGCTTACTTCGTCTAAATTCGATGGAATTGTTGCTCTAGAACTTGGAGCTGGAACAGGACTGGTTGGAATATTGCTTGCACGGGTTGCTAAAACAGTATTTCTAACAGATAAAGGCGATCATATTCTTGACAACTGTGCCAAAAACATTGGTCTTAATTCTGGTGGATTCAGTGCTGGAGTTGCAGTTCATGTAAGGGAACTTGATTGGACAGAACCTTGGCCTCCAAAGCAAACCCGAGGAGAATGTCACCCAAATAACAGGTATTCCTGGGCCTTATCAGAGGTTGAAGAGGCACAGGGAGCCTGCTTACTTGTTGCTGCCGATGTTATCTATAGTGACGACTTGACAGATGCGTTTTTTAGTATCTTAGAGAAGTTTATGTCTCAAGGTTCAGAAAAGGTGTTGTATTTGGCTTTGGAAAAGCGCTATAACTTCACTCTGAATGACTTTGACATTGTAGCAAATGGCTATTCTCATTTCCTAAGTTACCTGAAACATGAAGACGATTATTCCAAACACAGCAGATTGCAGCAGGAATCAAAACCATGTTTTATAGGCAACCGCATTGATCTCGCAAACATCCCACAATATGTCCTCAACTATGAAAGAGGGGAAGATGTAGAAATCTGGCAGATCAAGTATTGTAGGAAAGAGTCTTGA MDDGISEELVMSEVHLGCPPGFSGSFVSNFTISLPSGFDDLDTEPRTYVSDSEGYSPPSTKQLIRFDEDGDLVLPRRLNVEVEPSVRSYNVSIQHDIMSTIPSVGLQVWKAELVLSDFVLHTMLTSSKFDGIVALELGAGTGLVGILLARVAKTVFLTDKGDHILDNCAKNIGLNSGGFSAGVAVHVRELDWTEPWPPKQTRGECHPNNRYSWALSEVEEAQGACLLVAADVIYSDDLTDAFFSILEKFMSQGSEKVLYLALEKRYNFTLNDFDIVANGYSHFLSYLKHEDDYSKHSRLQQESKPCFIGNRIDLANIPQYVLNYERGEDVEIWQIKYCRKES
BLAST of Carg06486-RA vs. NCBI nr
Match: XP_023528002.1 (methyltransferase-like protein 22 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 678.3 bits (1749), Expect = 1.3e-191 Identity = 336/342 (98.25%), Postives = 337/342 (98.54%), Query Frame = 0
BLAST of Carg06486-RA vs. NCBI nr
Match: XP_022955571.1 (methyltransferase-like protein 22 isoform X1 [Cucurbita moschata]) HSP 1 Score: 675.6 bits (1742), Expect = 8.7e-191 Identity = 335/342 (97.95%), Postives = 336/342 (98.25%), Query Frame = 0
BLAST of Carg06486-RA vs. NCBI nr
Match: XP_022955572.1 (methyltransferase-like protein 22 isoform X2 [Cucurbita moschata]) HSP 1 Score: 666.8 bits (1719), Expect = 4.0e-188 Identity = 333/342 (97.37%), Postives = 334/342 (97.66%), Query Frame = 0
BLAST of Carg06486-RA vs. NCBI nr
Match: XP_022980860.1 (methyltransferase-like protein 22 isoform X1 [Cucurbita maxima]) HSP 1 Score: 664.8 bits (1714), Expect = 1.5e-187 Identity = 332/342 (97.08%), Postives = 334/342 (97.66%), Query Frame = 0
BLAST of Carg06486-RA vs. NCBI nr
Match: XP_023528004.1 (methyltransferase-like protein 22 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 661.8 bits (1706), Expect = 1.3e-186 Identity = 331/342 (96.78%), Postives = 332/342 (97.08%), Query Frame = 0
BLAST of Carg06486-RA vs. TAIR10
Match: AT1G79915.1 (Putative methyltransferase family protein) HSP 1 Score: 301.6 bits (771), Expect = 6.2e-82 Identity = 170/335 (50.75%), Postives = 211/335 (62.99%), Query Frame = 0
BLAST of Carg06486-RA vs. TAIR10
Match: AT2G26810.1 (Putative methyltransferase family protein) HSP 1 Score: 47.0 bits (110), Expect = 2.7e-05 Identity = 25/90 (27.78%), Postives = 43/90 (47.78%), Query Frame = 0
BLAST of Carg06486-RA vs. TAIR10
Match: AT5G49560.1 (Putative methyltransferase family protein) HSP 1 Score: 46.6 bits (109), Expect = 3.6e-05 Identity = 44/148 (29.73%), Postives = 65/148 (43.92%), Query Frame = 0
BLAST of Carg06486-RA vs. TAIR10
Match: AT5G27400.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 45.1 bits (105), Expect = 1.0e-04 Identity = 43/133 (32.33%), Postives = 60/133 (45.11%), Query Frame = 0
BLAST of Carg06486-RA vs. TAIR10
Match: AT1G08125.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04 Identity = 32/100 (32.00%), Postives = 51/100 (51.00%), Query Frame = 0
BLAST of Carg06486-RA vs. Swiss-Prot
Match: sp|Q9BUU2|MET22_HUMAN (Methyltransferase-like protein 22 OS=Homo sapiens OX=9606 GN=METTL22 PE=1 SV=2) HSP 1 Score: 136.7 bits (343), Expect = 4.7e-31 Identity = 116/347 (33.43%), Postives = 164/347 (47.26%), Query Frame = 0
BLAST of Carg06486-RA vs. Swiss-Prot
Match: sp|Q8R1C6|MET22_MOUSE (Methyltransferase-like protein 22 OS=Mus musculus OX=10090 GN=Mettl22 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 3.1e-30 Identity = 109/350 (31.14%), Postives = 165/350 (47.14%), Query Frame = 0
BLAST of Carg06486-RA vs. Swiss-Prot
Match: sp|P38347|EFM2_YEAST (Protein-lysine N-methyltransferase EFM2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=EFM2 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.3e-07 Identity = 59/200 (29.50%), Postives = 88/200 (44.00%), Query Frame = 0
BLAST of Carg06486-RA vs. Swiss-Prot
Match: sp|Q86JB0|Y8324_DICDI (Putative uncharacterized protein DDB_G0277003 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0277003 PE=4 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 2.0e-05 Identity = 52/190 (27.37%), Postives = 74/190 (38.95%), Query Frame = 0
BLAST of Carg06486-RA vs. Swiss-Prot
Match: sp|O14118|EFM3_SCHPO (Protein-lysine N-methyltransferase efm3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC3A11.03 PE=3 SV=3) HSP 1 Score: 51.2 bits (121), Expect = 2.6e-05 Identity = 47/205 (22.93%), Postives = 89/205 (43.41%), Query Frame = 0
BLAST of Carg06486-RA vs. TrEMBL
Match: tr|A0A1S3BHK9|A0A1S3BHK9_CUCME (methyltransferase-like protein 22 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489932 PE=4 SV=1) HSP 1 Score: 599.7 bits (1545), Expect = 4.0e-168 Identity = 298/342 (87.13%), Postives = 320/342 (93.57%), Query Frame = 0
BLAST of Carg06486-RA vs. TrEMBL
Match: tr|A0A1S3BHK0|A0A1S3BHK0_CUCME (methyltransferase-like protein 22 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489932 PE=4 SV=1) HSP 1 Score: 525.4 bits (1352), Expect = 9.6e-146 Identity = 267/342 (78.07%), Postives = 286/342 (83.63%), Query Frame = 0
BLAST of Carg06486-RA vs. TrEMBL
Match: tr|M5X0H5|M5X0H5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa015023mg PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 2.6e-111 Identity = 211/335 (62.99%), Postives = 250/335 (74.63%), Query Frame = 0
BLAST of Carg06486-RA vs. TrEMBL
Match: tr|A0A2N9FRG1|A0A2N9FRG1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21189 PE=4 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 5.9e-111 Identity = 212/338 (62.72%), Postives = 250/338 (73.96%), Query Frame = 0
BLAST of Carg06486-RA vs. TrEMBL
Match: tr|A0A2P4HQB1|A0A2P4HQB1_QUESU (Methyltransferase-like protein 22 OS=Quercus suber OX=58331 GN=CFP56_08945 PE=4 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 5.9e-111 Identity = 214/341 (62.76%), Postives = 256/341 (75.07%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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