Carg05725-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05725-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF4228 domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_033 : 648544 .. 649218 (+)
Sequence length	675

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACTGCTTATTCGGCGGTGGGTCTGGTGAGATTCAGGGGAAAATCAAGGTAATCACGTCCAACGGCGGGATTATGGAGTTGGGTTCTCCGATTACCGTCGGGTGCATCGCTGATGAGTTTCCCGGCTATGGAATATTCAAAAGCCAAGATCTTTTTTGGAACCCATTACCGCACAATGAGGAGCTGCTTCCGGGGAAATCCTACTACTTGCTTCAGAGAAACAGGGGAAGAAACAGAGGAGAGACAGAAGAAGGGGAAATGGGAATTATAAGGGCGCGTGAGGGGCACGTGAGGTCGAATAGTGTACCGGAGGCGACGACGGCGGCGGCGGCGGGTATAGCGCCGTACAGAATGTCGTTTGATTATCAGGGGGTTTTGAGGAGGTCGCAGACGGAGGTTTTTTCGAGGAGCAGTGAGAAGAACGGCGGGGGGGTTTGGAAGGTGAAATTGGTGATTAGTCCGAAGCGATTGGTGGAGATTTTGGAGGAGGAAGGTCACACTCAGGAGTTGATTGAGAGCGTAAGGACTGTGGCTAAATGTGGAAGTACTAGCACCAGCAGCAGCTTTTCGTCGTCCATGGCGTTTTCCGATCACTGGAGTTTGTCCTCCACCACCGCCAATGCTACTCCGAGCGCTTCCTCCAAAAGTGGCGGCTTGCCGGAGATCTAA

mRNA sequence

ATGGGGAACTGCTTATTCGGCGGTGGGTCTGGTGAGATTCAGGGGAAAATCAAGGTAATCACGTCCAACGGCGGGATTATGGAGTTGGGTTCTCCGATTACCGTCGGGTGCATCGCTGATGAGTTTCCCGGCTATGGAATATTCAAAAGCCAAGATCTTTTTTGGAACCCATTACCGCACAATGAGGAGCTGCTTCCGGGGAAATCCTACTACTTGCTTCAGAGAAACAGGGGAAGAAACAGAGGAGAGACAGAAGAAGGGGAAATGGGAATTATAAGGGCGCGTGAGGGGCACGTGAGGTCGAATAGTGTACCGGAGGCGACGACGGCGGCGGCGGCGGGTATAGCGCCGTACAGAATGTCGTTTGATTATCAGGGGGTTTTGAGGAGGTCGCAGACGGAGGTTTTTTCGAGGAGCAGTGAGAAGAACGGCGGGGGGGTTTGGAAGGTGAAATTGGTGATTAGTCCGAAGCGATTGGTGGAGATTTTGGAGGAGGAAGGTCACACTCAGGAGTTGATTGAGAGCGTAAGGACTGTGGCTAAATGTGGAAGTACTAGCACCAGCAGCAGCTTTTCGTCGTCCATGGCGTTTTCCGATCACTGGAGTTTGTCCTCCACCACCGCCAATGCTACTCCGAGCGCTTCCTCCAAAAGTGGCGGCTTGCCGGAGATCTAA

Coding sequence (CDS)

ATGGGGAACTGCTTATTCGGCGGTGGGTCTGGTGAGATTCAGGGGAAAATCAAGGTAATCACGTCCAACGGCGGGATTATGGAGTTGGGTTCTCCGATTACCGTCGGGTGCATCGCTGATGAGTTTCCCGGCTATGGAATATTCAAAAGCCAAGATCTTTTTTGGAACCCATTACCGCACAATGAGGAGCTGCTTCCGGGGAAATCCTACTACTTGCTTCAGAGAAACAGGGGAAGAAACAGAGGAGAGACAGAAGAAGGGGAAATGGGAATTATAAGGGCGCGTGAGGGGCACGTGAGGTCGAATAGTGTACCGGAGGCGACGACGGCGGCGGCGGCGGGTATAGCGCCGTACAGAATGTCGTTTGATTATCAGGGGGTTTTGAGGAGGTCGCAGACGGAGGTTTTTTCGAGGAGCAGTGAGAAGAACGGCGGGGGGGTTTGGAAGGTGAAATTGGTGATTAGTCCGAAGCGATTGGTGGAGATTTTGGAGGAGGAAGGTCACACTCAGGAGTTGATTGAGAGCGTAAGGACTGTGGCTAAATGTGGAAGTACTAGCACCAGCAGCAGCTTTTCGTCGTCCATGGCGTTTTCCGATCACTGGAGTTTGTCCTCCACCACCGCCAATGCTACTCCGAGCGCTTCCTCCAAAAGTGGCGGCTTGCCGGAGATCTAA

Protein sequence

MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATTAAAAGIAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDHWSLSSTTANATPSASSKSGGLPEI

Homology

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BLAST of Carg05725-RA vs. NCBI nr
Match: XP_022931324.1 (uncharacterized protein LOC111437546 [Cucurbita moschata])

HSP 1 Score: 431.8 bits (1109), Expect = 1.4e-117
Identity = 221/224 (98.66%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPH 60
           MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPH 60

Query: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATTAAAAGIAPYRM 120
           NEELLPGKSYYLLQRNRGRNRGETEEGEMG+IRAREGHVRSNSVPEAT AAAAG+APYRM
Sbjct: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVRSNSVPEATAAAAAGMAPYRM 120

Query: 121 SFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180
           SFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA
Sbjct: 121 SFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180

Query: 181 KCGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGLPEI 225
           KCGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGLPEI
Sbjct: 181 KCGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGLPEI 224

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BLAST of Carg05725-RA vs. NCBI nr
Match: XP_023552343.1 (uncharacterized protein LOC111810037 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.5 bits (1085), Expect = 8.7e-115
Identity = 220/224 (98.21%), Postives = 221/224 (98.66%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPH 60
           MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKS DLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATTAAAAGIAPYRM 120
           NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEA TAAAAG+APYRM
Sbjct: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEA-TAAAAGMAPYRM 120

Query: 121 SFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180
           SFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA
Sbjct: 121 SFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180

Query: 181 KCGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGLPEI 225
           KCGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGL EI
Sbjct: 181 KCGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGLLEI 223

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BLAST of Carg05725-RA vs. NCBI nr
Match: XP_022985129.1 (uncharacterized protein LOC111483212 [Cucurbita maxima])

HSP 1 Score: 396.7 bits (1018), Expect = 5.1e-107
Identity = 210/224 (93.75%), Postives = 213/224 (95.09%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPH 60
           MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKS DLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATTAAAAGIAPYRM 120
           NEELLPGKSYYLLQRNRGRNRGETEEGEMG+IRAREGHVRSNSVPEA TAAAAG+A YRM
Sbjct: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVRSNSVPEA-TAAAAGMASYRM 120

Query: 121 SFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180
           SFDYQGVLRRSQTEVFSRSSEKN GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA
Sbjct: 121 SFDYQGVLRRSQTEVFSRSSEKN-GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180

Query: 181 KCGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGLPEI 225
           KCGSTSTSS  XXX    DHWSLSSTTANATPSAS+KSGGL EI
Sbjct: 181 KCGSTSTSSXXXXXXXXXDHWSLSSTTANATPSASAKSGGLLEI 222

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BLAST of Carg05725-RA vs. NCBI nr
Match: XP_004146558.1 (PREDICTED: uncharacterized protein LOC101218947 [Cucumis sativus] >KGN53328.1 hypothetical protein Csa_4G047890 [Cucumis sativus])

HSP 1 Score: 338.2 bits (866), Expect = 2.1e-89
Identity = 185/224 (82.59%), Postives = 188/224 (83.93%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPH 60
           MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKS DLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATTAAAAGIAPYRM 120
           NEELLPGKSYYLL RNRGRNRG  +  EMGIIRAREGHVRSNSVPEA  AA A +APYRM
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEA-AAAMAAMAPYRM 120

Query: 121 SFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180
           SFDYQGVLRRSQTEVFSR SEKN GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA
Sbjct: 121 SFDYQGVLRRSQTEVFSRYSEKN-GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180

Query: 181 KCGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGLPEI 225
           KCGSTS     XXX                TPS SSKSGGL EI
Sbjct: 181 KCGSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 222

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BLAST of Carg05725-RA vs. NCBI nr
Match: XP_008452047.1 (PREDICTED: uncharacterized protein LOC103493172 [Cucumis melo])

HSP 1 Score: 337.8 bits (865), Expect = 2.8e-89
Identity = 184/224 (82.14%), Postives = 188/224 (83.93%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPH 60
           MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKS DLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATTAAAAGIAPYRM 120
           NEELLPGKSYYLL RNRGRNRG  +  EMGIIRAREGHVRSNSVPEA  AA A +APYRM
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGEEMGIIRAREGHVRSNSVPEA-AAAMAAMAPYRM 120

Query: 121 SFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180
           SFDYQGVLRRSQTEVFSR SEKN GGVWKVKLVISP+RLVEILEEEGHTQELIESVRTVA
Sbjct: 121 SFDYQGVLRRSQTEVFSRCSEKN-GGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVA 180

Query: 181 KCGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGLPEI 225
           KCGSTS     XXX                TPS SSKSGGL EI
Sbjct: 181 KCGSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 222

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BLAST of Carg05725-RA vs. TAIR10
Match: AT1G64700.1 (unknown protein)

HSP 1 Score: 141.0 bits (354), Expect = 9.1e-34
Identity = 90/207 (43.48%), Postives = 120/207 (57.97%), Query Frame = 0


Query: 1   MGNCLFGG-GSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLP 60
           MGNCLFGG G  E    IKVI S+GG++E  SP+T G ++  F G+ +F + DL W PL 
Sbjct: 1   MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLWKPLA 60

Query: 61  HNEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATTAAAAGIAPYR 120
           H+  L+PG+SYYL   N   +  +T  G          HVRSNS       + + I PYR
Sbjct: 61  HDHLLVPGQSYYLFP-NIVSDELKTFVGSC--------HVRSNS------ESLSAITPYR 120

Query: 121 MSFDY-QGVLRRSQTEVFSRSSE---------------KNGGGVWKVKLVISPKRLVEIL 180
           MS DY   VL+RS T+VFSR+S                 + G +WKV L+I+ + L++IL
Sbjct: 121 MSLDYNHRVLKRSYTDVFSRNSHIRTRQKEKKTRRRRTSSKGAIWKVNLIINTEELLQIL 180

Query: 181 EEEGHTQELIESVRTVAKCGSTSTSSS 191
            E+G T ELIESVR VAK  ++S +SS
Sbjct: 181 SEDGRTNELIESVRAVAKGETSSITSS 192

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BLAST of Carg05725-RA vs. TAIR10
Match: AT3G61920.1 (unknown protein)

HSP 1 Score: 108.6 bits (270), Expect = 5.0e-24
Identity = 84/214 (39.25%), Postives = 110/214 (51.40%), Query Frame = 0


Query: 1   MGNCLF--GGGSGEIQGK----IKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLF 60
           MGNC+F   GGS ++  K    IKV+T NGG+MEL  PI    I +EFPG+ I  S  L 
Sbjct: 1   MGNCVFKGNGGSRKLYDKDDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSLSLR 60

Query: 61  WN--PLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATTAAA 120
            +  PL H EEL PG  YYLL                 +  +     + +S  + +T   
Sbjct: 61  HSSPPLLHGEELFPGNIYYLLP----------------LSSSAAATAQLDSSDQLST--- 120

Query: 121 AGIAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQEL 180
               PYRMSF         +T + +  S   G GVWKV+LVISP++L EIL E+  T+ L
Sbjct: 121 ----PYRMSF--------GKTPIMAALS-GGGCGVWKVRLVISPEQLAEILAEDVETEAL 180

Query: 181 IESVRTVAKCGSTSTSSSFXXXMAFSDHWSLSST 207
           +ESVRTVAKCG            A SD  S++S+
Sbjct: 181 VESVRTVAKCGGYGCGGG-VHSRANSDQLSVTSS 181

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BLAST of Carg05725-RA vs. TrEMBL
Match: tr|A0A0A0KUU6|A0A0A0KUU6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047890 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.4e-89
Identity = 185/224 (82.59%), Postives = 188/224 (83.93%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPH 60
           MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKS DLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATTAAAAGIAPYRM 120
           NEELLPGKSYYLL RNRGRNRG  +  EMGIIRAREGHVRSNSVPEA  AA A +APYRM
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEA-AAAMAAMAPYRM 120

Query: 121 SFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180
           SFDYQGVLRRSQTEVFSR SEKN GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA
Sbjct: 121 SFDYQGVLRRSQTEVFSRYSEKN-GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180

Query: 181 KCGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGLPEI 225
           KCGSTS     XXX                TPS SSKSGGL EI
Sbjct: 181 KCGSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 222

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BLAST of Carg05725-RA vs. TrEMBL
Match: tr|A0A1S3BSZ8|A0A1S3BSZ8_CUCME (uncharacterized protein LOC103493172 OS=Cucumis melo OX=3656 GN=LOC103493172 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.9e-89
Identity = 184/224 (82.14%), Postives = 188/224 (83.93%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPH 60
           MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKS DLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATTAAAAGIAPYRM 120
           NEELLPGKSYYLL RNRGRNRG  +  EMGIIRAREGHVRSNSVPEA  AA A +APYRM
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGEEMGIIRAREGHVRSNSVPEA-AAAMAAMAPYRM 120

Query: 121 SFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180
           SFDYQGVLRRSQTEVFSR SEKN GGVWKVKLVISP+RLVEILEEEGHTQELIESVRTVA
Sbjct: 121 SFDYQGVLRRSQTEVFSRCSEKN-GGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVA 180

Query: 181 KCGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGLPEI 225
           KCGSTS     XXX                TPS SSKSGGL EI
Sbjct: 181 KCGSTSXXXXXXXXXXXXXXXXXXXXXXXXTPSVSSKSGGLLEI 222

[Close]

BLAST of Carg05725-RA vs. TrEMBL
Match: tr|A0A2N9E173|A0A2N9E173_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS289 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 134/224 (59.82%), Postives = 158/224 (70.54%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPH 60
           MGNCLF GG GE+ G IKV+TSNGGIME  +PITVG I  EFP +GIF+S DLFW PL H
Sbjct: 1   MGNCLF-GGLGEVDGVIKVVTSNGGIMEFYAPITVGSITTEFPSHGIFRSHDLFWKPLSH 60

Query: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATTAAAAGIAPYRM 120
           +EEL+ GKSYYLL  N       T+  E G I  R+GH+RSNS+P +       +APYRM
Sbjct: 61  HEELVAGKSYYLLPLN------ATDTLEQGQI-VRQGHIRSNSIPSSL------VAPYRM 120

Query: 121 SFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180
           SFDYQGVL+RS T+VFSR    N G  WKVKLVISP++L+EIL +EG TQELIESVRTVA
Sbjct: 121 SFDYQGVLKRSYTDVFSR---YNNGRFWKVKLVISPEQLLEILSQEGRTQELIESVRTVA 180

Query: 181 KCGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGLPEI 225
           KCG+   SS     + FSD WSLSS+      +ASSK  GL +I
Sbjct: 181 KCGNGGVSS-----VEFSDQWSLSSSR-----NASSKKDGLVDI 197

[Close]

BLAST of Carg05725-RA vs. TrEMBL
Match: tr|A0A2P5CJF4|A0A2P5CJF4_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_282920 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.9e-57
Identity = 133/224 (59.38%), Postives = 160/224 (71.43%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPH 60
           MGNCLF GG G+ +G IKV+TSNGG+ME  +PITVG IADEFPG+GIF++QDLFW PL H
Sbjct: 1   MGNCLF-GGLGDPEGMIKVVTSNGGVMEFFAPITVGSIADEFPGHGIFRNQDLFWKPLSH 60

Query: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATTAAAAGIAPYRM 120
            EEL+ G SYYLL  + G   G +  G++     REGHVRSNS+P     A++ +APYRM
Sbjct: 61  QEELVAGHSYYLLPLSGG---GGSASGDINASIVREGHVRSNSIP-----ASSVVAPYRM 120

Query: 121 SFDYQGVLRRSQTEVFSRSSE--KNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRT 180
           SFDYQG L+RS TEVFS       +GGG WKVKLVI+P++L+EIL +EG TQELIESVRT
Sbjct: 121 SFDYQGTLKRSYTEVFSTRGPYYNHGGGFWKVKLVIAPEQLLEILSQEGRTQELIESVRT 180

Query: 181 VAKC-GSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGL 222
           VAKC          XX + FSD WSLSS++ N    ASSK  GL
Sbjct: 181 VAKCXXXXXXXXXXXXAVGFSDQWSLSSSSRN----ASSKVDGL 211

[Close]

BLAST of Carg05725-RA vs. TrEMBL
Match: tr|A0A1R3K6V2|A0A1R3K6V2_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10817 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.6e-56
Identity = 126/221 (57.01%), Postives = 152/221 (68.78%), Query Frame = 0


Query: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPH 60
           MGNC+F GG G+  G IKVI SNGG+ME  +PIT G I D FPG+ IF+S DLFW PL H
Sbjct: 1   MGNCIF-GGFGDGDGVIKVINSNGGVMEFSAPITAGIITDGFPGHAIFRSHDLFWKPLFH 60

Query: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATTAAAAGIAPYRM 120
           +EELLPGKSYY+L  N G++   +     G I  REGHVRSNS P +        APYRM
Sbjct: 61  HEELLPGKSYYILPLN-GKDSYSSSGNNSGHINVREGHVRSNSNPTSLVT-----APYRM 120

Query: 121 SFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVA 180
           S DYQG L+RS T+VFSR ++ N  G WKVKLVI+P++L+EIL +E  TQELIESVRTVA
Sbjct: 121 SCDYQGTLKRSHTDVFSRYNKNNDSGFWKVKLVITPEQLLEILSQEARTQELIESVRTVA 180

Query: 181 KCGSTSTSSSFXXXMAFSDHWSLSSTTANATPSASSKSGGL 222
           KCG+  + S       FSD WSLSS++ NA   +  K GGL
Sbjct: 181 KCGNGVSKSG-----GFSDQWSLSSSSRNA---SCKKDGGL 206

The following BLAST results are available for this feature:

BLAST of Carg05725-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931324.1	1.4e-117	98.66	uncharacterized protein LOC111437546 [Cucurbita moschata]	[more]
XP_023552343.1	8.7e-115	98.21	uncharacterized protein LOC111810037 [Cucurbita pepo subsp. pepo]	[more]
XP_022985129.1	5.1e-107	93.75	uncharacterized protein LOC111483212 [Cucurbita maxima]	[more]
XP_004146558.1	2.1e-89	82.59	PREDICTED: uncharacterized protein LOC101218947 [Cucumis sativus] >KGN53328.1 hy...	[more]
XP_008452047.1	2.8e-89	82.14	PREDICTED: uncharacterized protein LOC103493172 [Cucumis melo]	[more]

BLAST of Carg05725-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64700.1	9.1e-34	43.48	unknown protein	[more]
AT3G61920.1	5.0e-24	39.25	unknown protein	[more]

BLAST of Carg05725-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg05725-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KUU6\|A0A0A0KUU6_CUCSA	1.4e-89	82.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047890 PE=4 SV=1	[more]
tr\|A0A1S3BSZ8\|A0A1S3BSZ8_CUCME	1.9e-89	82.14	uncharacterized protein LOC103493172 OS=Cucumis melo OX=3656 GN=LOC103493172 PE=...	[more]
tr\|A0A2N9E173\|A0A2N9E173_FAGSY	1.1e-57	59.82	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS289 PE=4 SV=1	[more]
tr\|A0A2P5CJF4\|A0A2P5CJF4_9ROSA	1.9e-57	59.38	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_282920 PE=4 S...	[more]
tr\|A0A1R3K6V2\|A0A1R3K6V2_9ROSI	4.6e-56	57.01	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10817 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg05725	Carg05725	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05725-RA.exon.1	Carg05725-RA.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05725-RA.CDS.1	Carg05725-RA.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg05725-RA	Carg05725-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..173 e-value: 9.7E-17 score: 61.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..224
None	No IPR available	PANTHER	PTHR33148:SF10	SUBFAMILY NOT NAMED	coord: 1..211
None	No IPR available	PANTHER	PTHR33148	FAMILY NOT NAMED	coord: 1..211