Carg05721-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAATTTATAAGAGAGAATGTTACCATTGAGGTGGATAACGATGGAGGAAAATGGGTTGGTATTTGGCGCCTCATTCTACTGAAGCATCCACCCTATGATGAGCCACGAAGAAATGGAAAGGTTCCGAAGATAATAACTCATCGATTGTTCCCTCAAGCACAGTATAGTATCTGGATTGATGGTAAAATGGAGCTGATAGTTGACCCTTTGCTCATTCTAGAAAGGTATTGTTTTTATGAAAATTTAGCGTTGTGATTCCCCACATTCTATTATTTTAATTTACATTCATTTCCATTAAGATATCATTTGACATGCTTACAATTTACAGCAAAGCCAAAAGGGTATCGTTTGTGTTAAATTATCATAACTGGGTGAATCCAATTTCTTTCTGGTTACTGTCTGTAAGGGGAGTCTTTATTGCTTTATAAGCAGGAGTGTGAAACATGTTAACTCATTCCAGAAATCCGTTTGAGATAAGGATGATGGAACTTCTCCAAACACTTCCTCTGATCTGTAAGCGTTCTTCGTAATTTACTTTTCATGCCCACTGCAGATACTTGTGGCGTGGGAATCATACCTTTGCCATTGCGCAACATAAGCATCATCGTAGTATCTATGAAGAGGCTGATTCCAATAAGCGAAGGAAGCGATATGCTCGTCCTCTTATTGACCTTCACATGAAAATATACCGTTATGAAGGAATGGAACCATGGAGTCCAGAGAAGAAAACTGTCAGTGGTAAGTCATGGCCATCCTTACCAGATTTCATTATTATTATTATTATTACTATTTTTGCTTTGAAGTCATTTGGTTCTCTTAGGACTATTTTGTCTGTAATATGTGAAATTAGAAATTCGACATAACTCACTCAATCACCATTCTTGACATATATAAAATGTCTGAAACTCTTTGTAACAAAAGTTTTTAAAGGGTTATGATTGTGCAACATAGTTGACTCTAAGATCATTATGAATTGTGGTTGTTTCTCTATGTTGAGGAAGTTCTCGTGAATCCTCCGTTTTGCAAGAGAGGAAGAGTCCTGTGGCAGGCTCGTTTTTTCGCTATCTTAGCGGAATTTGGCTTGAGAAGAACAGTAGAATCTTTAGAGTGGTTAGAGGTCTGGTGATAAGCCTAGGTAATTTAGTATAACTCGTACTTGTGGGTGTCCGTGAATCAGATTTCTTGTAATTATCAACTTGGCATCATTCTCTTGGATTGAAACCTGTTTTTGTGATTAGTTGTGGGTATTTTTATCGGTGAACCTTTTTTTTGTGTGCTCGTGTTCATGCTTTCTACACAACCTTTGTGTGTGTAGCAGCCCAAATCCATTGCTAGCAGATAACTGTCCGCCTTGGCCTGTTACGTATTGTCATCAGCCTCACGATTTTAATACGCGTCTATTAGGGGGCGGTGAACTTCGACTGTTACAAATGGTAACAGAGCTAGTCACCGGGCGGTGTGCCTGCGAGGACGCTGGGCCCCGAGGGGGTTAGATTATGAGATCCCACATCAGTTGGAGAGGAGAATGAATCATTCTTTATAAGGGTGTGGAAACCTTTCTGTAGTAGAAGCGTTTTAAAACCGTGAGGCTAACAAGGATACGTAACGAGCCAAAGTGGACAATATTTGCTAGCGTGGTCTTGGACTATTATAGTGTGTGTCCACAAAAATGTTGTCCTGATCCAAATTTACAAAATTGCAGATGTTCCAGAGGGAGCCATTATTATAAGGGAACATACAGCAATGAGTAATTTGTTTAGCTGCCTATGGTTCAACGAAGTTCACATGTTCACACCAAGAGACCAACTGAGTTTCGGGTACGTGGTATACAGGCTAGGCGATTCTTTCAAGTATTTCATGTTTCCGAATTGCGAGTATTACTCGCTTTTTATTTTGCACCCACATACGAGAGAGCACTCTTCTCTGATAGAGTGGGTTAAAGATTGGGATCAACTTAAGGGGAAGATGAGCAGCATGAAAGAGTATAAACAATGGAAGAAGCGTAACCCGTCGACGAGTTTGATAGAGACGAAGGGAGGATTAGGTTTGTGGACTACTTACCCTGGAAACCTTGATTCAGTTGTACTCCCATCTGTGGTGAGATCATCAAAAGCAGGATGA ATGCAATTTATAAGAGAGAATGTTACCATTGAGGTGGATAACGATGGAGGAAAATGGGTTGGTATTTGGCGCCTCATTCTACTGAAGCATCCACCCTATGATGAGCCACGAAGAAATGGAAAGGTTCCGAAGATAATAACTCATCGATTGTTCCCTCAAGCACAGTATAGTATCTGGATTGATGGTAAAATGGAGCTGATAGTTGACCCTTTGCTCATTCTAGAAAGATACTTGTGGCGTGGGAATCATACCTTTGCCATTGCGCAACATAAGCATCATCGTAGTATCTATGAAGAGGCTGATTCCAATAAGCGAAGGAAGCGATATGCTCGTCCTCTTATTGACCTTCACATGAAAATATACCGTTATGAAGGAATGGAACCATGGAGTCCAGAGAAGAAAACTGTCAGTGTTCACATGTTCACACCAAGAGACCAACTGAGTTTCGGGTACGTGGTATACAGGCTAGGCGATTCTTTCAAGTATTTCATGTTTCCGAATTGCGAGTATTACTCGCTTTTTATTTTGCACCCACATACGAGAGAGCACTCTTCTCTGATAGAGTGGGTTAAAGATTGGGATCAACTTAAGGGGAAGATGAGCAGCATGAAAGAGTATAAACAATGGAAGAAGCGTAACCCGTCGACGAGTTTGATAGAGACGAAGGGAGGATTAGGTTTGTGGACTACTTACCCTGGAAACCTTGATTCAGTTGTACTCCCATCTGTGGTGAGATCATCAAAAGCAGGATGA ATGCAATTTATAAGAGAGAATGTTACCATTGAGGTGGATAACGATGGAGGAAAATGGGTTGGTATTTGGCGCCTCATTCTACTGAAGCATCCACCCTATGATGAGCCACGAAGAAATGGAAAGGTTCCGAAGATAATAACTCATCGATTGTTCCCTCAAGCACAGTATAGTATCTGGATTGATGGTAAAATGGAGCTGATAGTTGACCCTTTGCTCATTCTAGAAAGATACTTGTGGCGTGGGAATCATACCTTTGCCATTGCGCAACATAAGCATCATCGTAGTATCTATGAAGAGGCTGATTCCAATAAGCGAAGGAAGCGATATGCTCGTCCTCTTATTGACCTTCACATGAAAATATACCGTTATGAAGGAATGGAACCATGGAGTCCAGAGAAGAAAACTGTCAGTGTTCACATGTTCACACCAAGAGACCAACTGAGTTTCGGGTACGTGGTATACAGGCTAGGCGATTCTTTCAAGTATTTCATGTTTCCGAATTGCGAGTATTACTCGCTTTTTATTTTGCACCCACATACGAGAGAGCACTCTTCTCTGATAGAGTGGGTTAAAGATTGGGATCAACTTAAGGGGAAGATGAGCAGCATGAAAGAGTATAAACAATGGAAGAAGCGTAACCCGTCGACGAGTTTGATAGAGACGAAGGGAGGATTAGGTTTGTGGACTACTTACCCTGGAAACCTTGATTCAGTTGTACTCCCATCTGTGGTGAGATCATCAAAAGCAGGATGA MQFIRENVTIEVDNDGGKWVGIWRLILLKHPPYDEPRRNGKVPKIITHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGNHTFAIAQHKHHRSIYEEADSNKRRKRYARPLIDLHMKIYRYEGMEPWSPEKKTVSVHMFTPRDQLSFGYVVYRLGDSFKYFMFPNCEYYSLFILHPHTREHSSLIEWVKDWDQLKGKMSSMKEYKQWKKRNPSTSLIETKGGLGLWTTYPGNLDSVVLPSVVRSSKAG
BLAST of Carg05721-RA vs. NCBI nr
Match: XP_022928268.1 (uncharacterized protein LOC111435149 isoform X2 [Cucurbita moschata]) HSP 1 Score: 518.8 bits (1335), Expect = 9.9e-144 Identity = 250/276 (90.58%), Postives = 250/276 (90.58%), Query Frame = 0
BLAST of Carg05721-RA vs. NCBI nr
Match: XP_022928266.1 (uncharacterized protein LOC111435149 isoform X1 [Cucurbita moschata] >XP_022928267.1 uncharacterized protein LOC111435149 isoform X1 [Cucurbita moschata]) HSP 1 Score: 518.8 bits (1335), Expect = 9.9e-144 Identity = 250/276 (90.58%), Postives = 250/276 (90.58%), Query Frame = 0
BLAST of Carg05721-RA vs. NCBI nr
Match: XP_023529667.1 (uncharacterized protein LOC111792436 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023529668.1 uncharacterized protein LOC111792436 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 518.5 bits (1334), Expect = 1.3e-143 Identity = 249/276 (90.22%), Postives = 250/276 (90.58%), Query Frame = 0
BLAST of Carg05721-RA vs. NCBI nr
Match: XP_023529665.1 (uncharacterized protein LOC111792436 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023529666.1 uncharacterized protein LOC111792436 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 518.5 bits (1334), Expect = 1.3e-143 Identity = 249/276 (90.22%), Postives = 250/276 (90.58%), Query Frame = 0
BLAST of Carg05721-RA vs. NCBI nr
Match: XP_022989232.1 (uncharacterized protein LOC111486372 isoform X2 [Cucurbita maxima]) HSP 1 Score: 515.0 bits (1325), Expect = 1.4e-142 Identity = 247/276 (89.49%), Postives = 250/276 (90.58%), Query Frame = 0
BLAST of Carg05721-RA vs. TAIR10
Match: AT4G38500.1 (Protein of unknown function (DUF616)) HSP 1 Score: 374.8 bits (961), Expect = 4.2e-104 Identity = 185/276 (67.03%), Postives = 205/276 (74.28%), Query Frame = 0
BLAST of Carg05721-RA vs. TAIR10
Match: AT1G28240.1 (Protein of unknown function (DUF616)) HSP 1 Score: 146.0 bits (367), Expect = 3.2e-35 Identity = 76/197 (38.58%), Postives = 110/197 (55.84%), Query Frame = 0
BLAST of Carg05721-RA vs. TAIR10
Match: AT1G53040.1 (Protein of unknown function (DUF616)) HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33 Identity = 71/184 (38.59%), Postives = 106/184 (57.61%), Query Frame = 0
BLAST of Carg05721-RA vs. TAIR10
Match: AT4G09630.1 (Protein of unknown function (DUF616)) HSP 1 Score: 132.9 bits (333), Expect = 2.8e-31 Identity = 70/202 (34.65%), Postives = 105/202 (51.98%), Query Frame = 0
BLAST of Carg05721-RA vs. TAIR10
Match: AT1G34550.1 (Protein of unknown function (DUF616)) HSP 1 Score: 132.1 bits (331), Expect = 4.7e-31 Identity = 73/209 (34.93%), Postives = 111/209 (53.11%), Query Frame = 0
BLAST of Carg05721-RA vs. TrEMBL
Match: tr|A0A1S3BSQ6|A0A1S3BSQ6_CUCME (uncharacterized protein LOC103492844 OS=Cucumis melo OX=3656 GN=LOC103492844 PE=4 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 8.6e-136 Identity = 233/276 (84.42%), Postives = 244/276 (88.41%), Query Frame = 0
BLAST of Carg05721-RA vs. TrEMBL
Match: tr|A0A0A0LJA5|A0A0A0LJA5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059800 PE=4 SV=1) HSP 1 Score: 486.5 bits (1251), Expect = 3.6e-134 Identity = 232/276 (84.06%), Postives = 243/276 (88.04%), Query Frame = 0
BLAST of Carg05721-RA vs. TrEMBL
Match: tr|A0A2P6PSY0|A0A2P6PSY0_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0278831 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 8.3e-115 Identity = 196/276 (71.01%), Postives = 221/276 (80.07%), Query Frame = 0
BLAST of Carg05721-RA vs. TrEMBL
Match: tr|A0A2P5B8D4|A0A2P5B8D4_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_262020 PE=4 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 1.6e-113 Identity = 195/276 (70.65%), Postives = 221/276 (80.07%), Query Frame = 0
BLAST of Carg05721-RA vs. TrEMBL
Match: tr|A0A2P5EWL6|A0A2P5EWL6_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_142220 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 7.8e-113 Identity = 194/276 (70.29%), Postives = 221/276 (80.07%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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