Carg05707-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05707-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Heavy metal-associated isoprenylated plant protein
Location	Cucurbita_argyrosperma_scaffold_033 : 550507 .. 551175 (-)
Sequence length	546

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAGATTCAGTGCCCTGCCATTTCCATTACTTCAAAATCTCTGCAAAATCAACTGAGTTTTTCTTCTTGTTCTTGTTCTTGATGGGCGTTTTGGATCATTTCTCTGAGTATTTCGATTGCAGTTCCCACAGCTCCAAGCACAAGAAACGCAAGCAATTGCAGGTAAAAATCCCCCCCAGTTCTTCAAATTTCTGCTCTGTTCTTGCTTAGATTCTTCATTTTTTCCCGTTTTGATTCAAAATCGTATGGTTTTTTCTCTCCGATTCTGTTTCTTCGCCATTACAGACAGTGGAATTAAAGATTCGAATCGACTGCGAAGGTTGCGAGAGGAAGGTGAGGAGAGCGTTGGAGGGGATGAAGGGGGTAAAGACCGTCGACATTGATCGCAAGGCCAATAAAGCCACCGTCGTTGGATACGTCGAGCCGTCCAAAGTGGTGGCGCGTGTCACTCACCGTACCGGTAAGAAGGCGGAGCTCTGGCCTTATGTGCCGTACGACGTCGTGGCTCATCCCTACGCGCCGGGAGTGTATGACAAGAAGGCTCCAGCTGGGTACGTGCGAAAGGCTGATGATCCCAATGCGTACCAGCTCGCACGTGCGAGTTCCACTGAGGTTCGCTATACGACGGCGTTTAGTGACGAAAATCCCGCGGCGTGTGCTGTTATGTAA

mRNA sequence

CCAGATTCAGTGCCCTGCCATTTCCATTACTTCAAAATCTCTGCAAAATCAACTGAGTTTTTCTTCTTGTTCTTGTTCTTGATGGGCGTTTTGGATCATTTCTCTGAGTATTTCGATTGCAGTTCCCACAGCTCCAAGCACAAGAAACGCAAGCAATTGCAGACAGTGGAATTAAAGATTCGAATCGACTGCGAAGGTTGCGAGAGGAAGGTGAGGAGAGCGTTGGAGGGGATGAAGGGGGTAAAGACCGTCGACATTGATCGCAAGGCCAATAAAGCCACCGTCGTTGGATACGTCGAGCCGTCCAAAGTGGTGGCGCGTGTCACTCACCGTACCGGTAAGAAGGCGGAGCTCTGGCCTTATGTGCCGTACGACGTCGTGGCTCATCCCTACGCGCCGGGAGTGTATGACAAGAAGGCTCCAGCTGGGTACGTGCGAAAGGCTGATGATCCCAATGCGTACCAGCTCGCACGTGCGAGTTCCACTGAGGTTCGCTATACGACGGCGTTTAGTGACGAAAATCCCGCGGCGTGTGCTGTTATGTAA

Coding sequence (CDS)

ATGGGCGTTTTGGATCATTTCTCTGAGTATTTCGATTGCAGTTCCCACAGCTCCAAGCACAAGAAACGCAAGCAATTGCAGACAGTGGAATTAAAGATTCGAATCGACTGCGAAGGTTGCGAGAGGAAGGTGAGGAGAGCGTTGGAGGGGATGAAGGGGGTAAAGACCGTCGACATTGATCGCAAGGCCAATAAAGCCACCGTCGTTGGATACGTCGAGCCGTCCAAAGTGGTGGCGCGTGTCACTCACCGTACCGGTAAGAAGGCGGAGCTCTGGCCTTATGTGCCGTACGACGTCGTGGCTCATCCCTACGCGCCGGGAGTGTATGACAAGAAGGCTCCAGCTGGGTACGTGCGAAAGGCTGATGATCCCAATGCGTACCAGCTCGCACGTGCGAGTTCCACTGAGGTTCGCTATACGACGGCGTTTAGTGACGAAAATCCCGCGGCGTGTGCTGTTATGTAA

Protein sequence

MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDIDRKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRKADDPNAYQLARASSTEVRYTTAFSDENPAACAVM

Homology

[Close]

BLAST of Carg05707-RA vs. NCBI nr
Match: XP_022928351.1 (heavy metal-associated isoprenylated plant protein 26-like [Cucurbita moschata] >XP_023529807.1 heavy metal-associated isoprenylated plant protein 26-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.2 bits (801), Expect = 5.1e-82
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60
           MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID
Sbjct: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60

Query: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120
           RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK
Sbjct: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120

Query: 121 ADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
           ADDPNAYQLARASSTEVRYTTAFSDENPAACAVM
Sbjct: 121 ADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 154

[Close]

BLAST of Carg05707-RA vs. NCBI nr
Match: XP_022989067.1 (heavy metal-associated isoprenylated plant protein 26 [Cucurbita maxima] >XP_022989068.1 heavy metal-associated isoprenylated plant protein 26 [Cucurbita maxima])

HSP 1 Score: 307.0 bits (785), Expect = 3.6e-80
Identity = 151/154 (98.05%), Postives = 152/154 (98.70%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60
           MGVLDH SEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID
Sbjct: 1   MGVLDHVSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60

Query: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120
           RKANKATVVGYVEPSKV+ARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK
Sbjct: 61  RKANKATVVGYVEPSKVMARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120

Query: 121 ADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
           ADDP AYQLARASSTEVRYTTAFSDENPAACAVM
Sbjct: 121 ADDPGAYQLARASSTEVRYTTAFSDENPAACAVM 154

[Close]

BLAST of Carg05707-RA vs. NCBI nr
Match: XP_022952479.1 (heavy metal-associated isoprenylated plant protein 26-like [Cucurbita moschata] >XP_022969515.1 heavy metal-associated isoprenylated plant protein 26-like [Cucurbita maxima] >XP_023553686.1 heavy metal-associated isoprenylated plant protein 26-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.5 bits (776), Expect = 4.0e-79
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60
           MGVLDH S+YFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVK VD+D
Sbjct: 1   MGVLDHLSDYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKQVDVD 60

Query: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120
           RKANKATVVGYVEPSKVVARV HRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK
Sbjct: 61  RKANKATVVGYVEPSKVVARVAHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120

Query: 121 ADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
           ADDPN YQLARASSTEVRYTTAFSDENPAACAVM
Sbjct: 121 ADDPNVYQLARASSTEVRYTTAFSDENPAACAVM 154

[Close]

BLAST of Carg05707-RA vs. NCBI nr
Match: XP_008447957.1 (PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 1.7e-77
Identity = 144/154 (93.51%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60
           MGVLDH S+YFDCSSH SKHKKRKQLQTVELKIRIDCEGCERKV+RALEGMKGVK VD+D
Sbjct: 1   MGVLDHLSDYFDCSSHGSKHKKRKQLQTVELKIRIDCEGCERKVKRALEGMKGVKQVDVD 60

Query: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120
           RK+NKATVVGYVEPSKVVARV HRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK
Sbjct: 61  RKSNKATVVGYVEPSKVVARVAHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120

Query: 121 ADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
           ADDPN YQLARASSTEVRYTTAFSDENPAAC VM
Sbjct: 121 ADDPNVYQLARASSTEVRYTTAFSDENPAACVVM 154

[Close]

BLAST of Carg05707-RA vs. NCBI nr
Match: XP_022136102.1 (heavy metal-associated isoprenylated plant protein 26-like [Momordica charantia])

HSP 1 Score: 292.4 bits (747), Expect = 9.3e-76
Identity = 141/154 (91.56%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60
           MGVLDH S+YFDCSS  SKHKKRKQLQTVE+K+RIDCEGCERKV+RA+EGMKGVK VD+D
Sbjct: 1   MGVLDHLSDYFDCSSGHSKHKKRKQLQTVEVKVRIDCEGCERKVKRAVEGMKGVKQVDVD 60

Query: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120
           RKANK TVVGYVEPSKVVARV HRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK
Sbjct: 61  RKANKVTVVGYVEPSKVVARVAHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120

Query: 121 ADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
           ADDPN YQLARASSTEVRYTTAFSDENPAACAVM
Sbjct: 121 ADDPNVYQLARASSTEVRYTTAFSDENPAACAVM 154

[Close]

BLAST of Carg05707-RA vs. TAIR10
Match: AT4G38580.1 (farnesylated protein 6)

HSP 1 Score: 250.8 bits (639), Expect = 5.6e-67
Identity = 121/154 (78.57%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60
           MGVLDH SE FDC SH  K KKRKQLQTVE+K+++DCEGCERKVRR++EGMKGV +V ++
Sbjct: 1   MGVLDHVSEMFDC-SHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLE 60

Query: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120
            KA+K TVVGYV+P+KVVAR++HRTGKK ELWPYVPYDVVAHPYA GVYDKKAP+GYVR+
Sbjct: 61  PKAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGYVRR 120

Query: 121 ADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
            DDP   QLARASSTEVRYTTAFSDENPAAC VM
Sbjct: 121 VDDPGVSQLARASSTEVRYTTAFSDENPAACVVM 153

[Close]

BLAST of Carg05707-RA vs. TAIR10
Match: AT4G35060.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 224.2 bits (570), Expect = 5.6e-59
Identity = 111/155 (71.61%), Postives = 130/155 (83.87%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60
           MGVLDH SEYFDCS  SS  K+ K LQTV++++ IDCEGCERKVRRALEGM+G++ V I+
Sbjct: 1   MGVLDHVSEYFDCSHGSS--KRHKSLQTVDVRVLIDCEGCERKVRRALEGMRGIRDVTIE 60

Query: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120
             A K TVVGYVEP+KVVAR+ HRTGK+AEL+P+VPYDVVAHPYA GVYD +AP GYVR 
Sbjct: 61  PNAQKVTVVGYVEPNKVVARIIHRTGKRAELYPFVPYDVVAHPYASGVYDNRAPTGYVRN 120

Query: 121 AD-DPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
            + DP+  +LARASSTEVRYTTAFSDEN +AC VM
Sbjct: 121 TEYDPHVSRLARASSTEVRYTTAFSDENASACVVM 153

[Close]

BLAST of Carg05707-RA vs. TAIR10
Match: AT5G66110.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 194.5 bits (493), Expect = 4.8e-50
Identity = 94/136 (69.12%), Postives = 111/136 (81.62%), Query Frame = 0


Query: 20  HKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDIDRKANKATVVGYVEPSKVVA 79
           HKK KQ Q VE+K+++DCEGCER+VR+++EGMKGV  V +D K +K TV G+V+PSKVV 
Sbjct: 12  HKKLKQFQKVEIKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVH 71

Query: 80  RVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRKA-DDPNAYQLARASSTEVR 139
           RV HRTGKKAELWPYVPY+VV HPYAPG YDKKAP GYVR A  DP    LARASS EV+
Sbjct: 72  RVMHRTGKKAELWPYVPYEVVPHPYAPGAYDKKAPPGYVRNALADPLVAPLARASSFEVK 131

Query: 140 YTTAFSDENPAACAVM 155
           YT+AFSD+NP AC +M
Sbjct: 132 YTSAFSDDNPNACTIM 147

[Close]

BLAST of Carg05707-RA vs. TAIR10
Match: AT1G71050.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 173.3 bits (438), Expect = 1.1e-43
Identity = 88/155 (56.77%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 1   MGVLDHFSEYF-DCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDI 60
           MG LD  SEY  D    + K +KRK +QTV +K+++DC+GCER+V+ A+  MKGVK+V++
Sbjct: 1   MGALDSLSEYISDYFRVTRKRRKRKVMQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEV 60

Query: 61  DRKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVR 120
           +RK +K TV GYVEP KV+ R+  RTGKKAE+WPYVPY++VA+PYA G YDKKAPAGYVR
Sbjct: 61  NRKIHKVTVSGYVEPKKVLKRI-ERTGKKAEIWPYVPYNMVAYPYAVGTYDKKAPAGYVR 120

Query: 121 KADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
           K++      L  A   E  Y + FSDENP AC VM
Sbjct: 121 KSEQSQLQLLPGA--PENHYISLFSDENPNACTVM 152

[Close]

BLAST of Carg05707-RA vs. TAIR10
Match: AT1G22990.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 1.2e-40
Identity = 81/156 (51.92%), Postives = 110/156 (70.51%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSS--KHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVD 60
           MG L++ SEYF    + S  K KKRK +QTV +K++IDC+GCERK++ A+  +KG K+V+
Sbjct: 1   MGALNYLSEYFSNHFYVSIRKRKKRKVMQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVE 60

Query: 61  IDRKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYV 120
           ++RK +K TV GYV+P KV+  V     KKAELWPYVPY +VA+PYA G YDK+AP G+V
Sbjct: 61  VNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWPYVPYTMVAYPYAAGAYDKRAPPGFV 120

Query: 121 RKADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
           RK++       A+  ST+ +  + FSDENP AC VM
Sbjct: 121 RKSEQAQ----AQPGSTDDKLMSLFSDENPNACTVM 152

[Close]

BLAST of Carg05707-RA vs. Swiss-Prot
Match: sp|Q9SZN7|HIP26_ARATH (Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana OX=3702 GN=HIPP26 PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.0e-65
Identity = 121/154 (78.57%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60
           MGVLDH SE FDC SH  K KKRKQLQTVE+K+++DCEGCERKVRR++EGMKGV +V ++
Sbjct: 1   MGVLDHVSEMFDC-SHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLE 60

Query: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120
            KA+K TVVGYV+P+KVVAR++HRTGKK ELWPYVPYDVVAHPYA GVYDKKAP+GYVR+
Sbjct: 61  PKAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGYVRR 120

Query: 121 ADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
            DDP   QLARASSTEVRYTTAFSDENPAAC VM
Sbjct: 121 VDDPGVSQLARASSTEVRYTTAFSDENPAACVVM 153

[Close]

BLAST of Carg05707-RA vs. Swiss-Prot
Match: sp|O49613|HIP25_ARATH (Heavy metal-associated isoprenylated plant protein 25 OS=Arabidopsis thaliana OX=3702 GN=HIPP25 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-57
Identity = 111/155 (71.61%), Postives = 130/155 (83.87%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60
           MGVLDH SEYFDCS  SS  K+ K LQTV++++ IDCEGCERKVRRALEGM+G++ V I+
Sbjct: 1   MGVLDHVSEYFDCSHGSS--KRHKSLQTVDVRVLIDCEGCERKVRRALEGMRGIRDVTIE 60

Query: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120
             A K TVVGYVEP+KVVAR+ HRTGK+AEL+P+VPYDVVAHPYA GVYD +AP GYVR 
Sbjct: 61  PNAQKVTVVGYVEPNKVVARIIHRTGKRAELYPFVPYDVVAHPYASGVYDNRAPTGYVRN 120

Query: 121 AD-DPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
            + DP+  +LARASSTEVRYTTAFSDEN +AC VM
Sbjct: 121 TEYDPHVSRLARASSTEVRYTTAFSDENASACVVM 153

[Close]

BLAST of Carg05707-RA vs. Swiss-Prot
Match: sp|Q67ZW1|HIP27_ARATH (Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana OX=3702 GN=HIPP27 PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 8.6e-49
Identity = 94/136 (69.12%), Postives = 111/136 (81.62%), Query Frame = 0


Query: 20  HKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDIDRKANKATVVGYVEPSKVVA 79
           HKK KQ Q VE+K+++DCEGCER+VR+++EGMKGV  V +D K +K TV G+V+PSKVV 
Sbjct: 12  HKKLKQFQKVEIKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVH 71

Query: 80  RVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRKA-DDPNAYQLARASSTEVR 139
           RV HRTGKKAELWPYVPY+VV HPYAPG YDKKAP GYVR A  DP    LARASS EV+
Sbjct: 72  RVMHRTGKKAELWPYVPYEVVPHPYAPGAYDKKAPPGYVRNALADPLVAPLARASSFEVK 131

Query: 140 YTTAFSDENPAACAVM 155
           YT+AFSD+NP AC +M
Sbjct: 132 YTSAFSDDNPNACTIM 147

[Close]

BLAST of Carg05707-RA vs. Swiss-Prot
Match: sp|Q9C9A3|HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana OX=3702 GN=HIPP20 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-42
Identity = 88/155 (56.77%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 1   MGVLDHFSEYF-DCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDI 60
           MG LD  SEY  D    + K +KRK +QTV +K+++DC+GCER+V+ A+  MKGVK+V++
Sbjct: 1   MGALDSLSEYISDYFRVTRKRRKRKVMQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEV 60

Query: 61  DRKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVR 120
           +RK +K TV GYVEP KV+ R+  RTGKKAE+WPYVPY++VA+PYA G YDKKAPAGYVR
Sbjct: 61  NRKIHKVTVSGYVEPKKVLKRI-ERTGKKAEIWPYVPYNMVAYPYAVGTYDKKAPAGYVR 120

Query: 121 KADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
           K++      L  A   E  Y + FSDENP AC VM
Sbjct: 121 KSEQSQLQLLPGA--PENHYISLFSDENPNACTVM 152

[Close]

BLAST of Carg05707-RA vs. Swiss-Prot
Match: sp|Q93VP2|HIP22_ARATH (Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana OX=3702 GN=HIPP22 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-39
Identity = 81/156 (51.92%), Postives = 110/156 (70.51%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSS--KHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVD 60
           MG L++ SEYF    + S  K KKRK +QTV +K++IDC+GCERK++ A+  +KG K+V+
Sbjct: 1   MGALNYLSEYFSNHFYVSIRKRKKRKVMQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVE 60

Query: 61  IDRKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYV 120
           ++RK +K TV GYV+P KV+  V     KKAELWPYVPY +VA+PYA G YDK+AP G+V
Sbjct: 61  VNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWPYVPYTMVAYPYAAGAYDKRAPPGFV 120

Query: 121 RKADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
           RK++       A+  ST+ +  + FSDENP AC VM
Sbjct: 121 RKSEQAQ----AQPGSTDDKLMSLFSDENPNACTVM 152

[Close]

BLAST of Carg05707-RA vs. TrEMBL
Match: tr|A0A1S3BIL5|A0A1S3BIL5_CUCME (heavy metal-associated isoprenylated plant protein 26-like OS=Cucumis melo OX=3656 GN=LOC103490286 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-77
Identity = 144/154 (93.51%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60
           MGVLDH S+YFDCSSH SKHKKRKQLQTVELKIRIDCEGCERKV+RALEGMKGVK VD+D
Sbjct: 1   MGVLDHLSDYFDCSSHGSKHKKRKQLQTVELKIRIDCEGCERKVKRALEGMKGVKQVDVD 60

Query: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120
           RK+NKATVVGYVEPSKVVARV HRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK
Sbjct: 61  RKSNKATVVGYVEPSKVVARVAHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120

Query: 121 ADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
           ADDPN YQLARASSTEVRYTTAFSDENPAAC VM
Sbjct: 121 ADDPNVYQLARASSTEVRYTTAFSDENPAACVVM 154

[Close]

BLAST of Carg05707-RA vs. TrEMBL
Match: tr|B9T850|B9T850_RICCO (Metal ion binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0083440 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.0e-70
Identity = 129/154 (83.77%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60
           MG LDHFS  FDCS  SSKHKKRKQLQTVE+K+RIDCEGCERKV+RA+EGMKGVK VD+D
Sbjct: 1   MGALDHFSHLFDCSHGSSKHKKRKQLQTVEIKVRIDCEGCERKVKRAVEGMKGVKQVDVD 60

Query: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120
           RK+NK TVVGYV+PSKVVARV HRTGK+AELWPYVPYDVVAHPYAPGVYDKKAP+GYVR+
Sbjct: 61  RKSNKLTVVGYVDPSKVVARVAHRTGKRAELWPYVPYDVVAHPYAPGVYDKKAPSGYVRR 120

Query: 121 ADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
           A+DP   QLARASSTEVRYTTAFSDENP AC++M
Sbjct: 121 AEDPQVSQLARASSTEVRYTTAFSDENPQACSIM 154

[Close]

BLAST of Carg05707-RA vs. TrEMBL
Match: tr|B9H1A3|B9H1A3_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G175400v3 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 8.6e-70
Identity = 131/154 (85.06%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60
           MG LDH S +FDCSS SSK KKR+QLQTVE+K+RIDCEGCERKV+RALEGMKGVK VD++
Sbjct: 1   MGALDHLSGFFDCSSGSSKLKKRRQLQTVEVKVRIDCEGCERKVKRALEGMKGVKQVDVE 60

Query: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120
           RKANK TVVGYV+PSKVVARV HRTGKKAELWPYVPYD+VAHPYAPGVYDKKAPAGYVR 
Sbjct: 61  RKANKVTVVGYVDPSKVVARVAHRTGKKAELWPYVPYDMVAHPYAPGVYDKKAPAGYVRN 120

Query: 121 ADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
           A+DP   QLARASSTEVRYTTAFSDENPAACA+M
Sbjct: 121 AEDPQVSQLARASSTEVRYTTAFSDENPAACAIM 154

[Close]

BLAST of Carg05707-RA vs. TrEMBL
Match: tr|A0A2C9W0K2|A0A2C9W0K2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G076000 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.5e-69
Identity = 130/154 (84.42%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60
           MG LDHFS  FDCS  SSK KKRKQLQTVE+K+RIDCEGCERKV+RA+EGMKGVK VD++
Sbjct: 1   MGALDHFSHLFDCSHGSSKLKKRKQLQTVEIKVRIDCEGCERKVKRAVEGMKGVKQVDVE 60

Query: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120
           RKANK TVVGYV+PSKVVARV HRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVR+
Sbjct: 61  RKANKLTVVGYVDPSKVVARVAHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRR 120

Query: 121 ADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
           A+DP   QLARASSTEVRYTTAFSDENP AC++M
Sbjct: 121 AEDPQVSQLARASSTEVRYTTAFSDENPQACSIM 154

[Close]

BLAST of Carg05707-RA vs. TrEMBL
Match: tr|A0A2P2J9R8|A0A2P2J9R8_RHIMU (Uncharacterized protein MANES_04G076000 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 9.5e-69
Identity = 130/154 (84.42%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 1   MGVLDHFSEYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKTVDID 60
           MG LDHFS+ FDCSS SSK KKRKQLQTVE+K+RIDCEGCERKV+RALEGMKGVK VD++
Sbjct: 1   MGALDHFSDLFDCSSGSSKLKKRKQLQTVEVKVRIDCEGCERKVKRALEGMKGVKQVDVE 60

Query: 61  RKANKATVVGYVEPSKVVARVTHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRK 120
           RKANK TVVGYVEPSKVV+RV HRTGKKAELWPYVPYDVVAHPYAPGVYD+KAPAGYVR 
Sbjct: 61  RKANKVTVVGYVEPSKVVSRVAHRTGKKAELWPYVPYDVVAHPYAPGVYDRKAPAGYVRY 120

Query: 121 ADDPNAYQLARASSTEVRYTTAFSDENPAACAVM 155
           A+DP   QLARASSTEVRYTTAFSDEN  AC++M
Sbjct: 121 AEDPQVSQLARASSTEVRYTTAFSDENAQACSIM 154

The following BLAST results are available for this feature:

BLAST of Carg05707-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928351.1	5.1e-82	100.00	heavy metal-associated isoprenylated plant protein 26-like [Cucurbita moschata] ...	[more]
XP_022989067.1	3.6e-80	98.05	heavy metal-associated isoprenylated plant protein 26 [Cucurbita maxima] >XP_022...	[more]
XP_022952479.1	4.0e-79	96.10	heavy metal-associated isoprenylated plant protein 26-like [Cucurbita moschata] ...	[more]
XP_008447957.1	1.7e-77	93.51	PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cucumis m...	[more]
XP_022136102.1	9.3e-76	91.56	heavy metal-associated isoprenylated plant protein 26-like [Momordica charantia]	[more]

BLAST of Carg05707-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38580.1	5.6e-67	78.57	farnesylated protein 6	[more]
AT4G35060.1	5.6e-59	71.61	Heavy metal transport/detoxification superfamily protein	[more]
AT5G66110.1	4.8e-50	69.12	Heavy metal transport/detoxification superfamily protein	[more]
AT1G71050.1	1.1e-43	56.77	Heavy metal transport/detoxification superfamily protein	[more]
AT1G22990.1	1.2e-40	51.92	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of Carg05707-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SZN7\|HIP26_ARATH	1.0e-65	78.57	Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana OX...	[more]
sp\|O49613\|HIP25_ARATH	1.0e-57	71.61	Heavy metal-associated isoprenylated plant protein 25 OS=Arabidopsis thaliana OX...	[more]
sp\|Q67ZW1\|HIP27_ARATH	8.6e-49	69.12	Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9C9A3\|HIP20_ARATH	2.1e-42	56.77	Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana OX...	[more]
sp\|Q93VP2\|HIP22_ARATH	2.1e-39	51.92	Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana OX...	[more]

BLAST of Carg05707-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BIL5\|A0A1S3BIL5_CUCME	1.1e-77	93.51	heavy metal-associated isoprenylated plant protein 26-like OS=Cucumis melo OX=36...	[more]
tr\|B9T850\|B9T850_RICCO	5.0e-70	83.77	Metal ion binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0083440 ...	[more]
tr\|B9H1A3\|B9H1A3_POPTR	8.6e-70	85.06	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G175400v3 PE=...	[more]
tr\|A0A2C9W0K2\|A0A2C9W0K2_MANES	2.5e-69	84.42	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G076000 PE=4 SV=...	[more]
tr\|A0A2P2J9R8\|A0A2P2J9R8_RHIMU	9.5e-69	84.42	Uncharacterized protein MANES_04G076000 OS=Rhizophora mucronata OX=61149 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036163	HMA_dom_sf
IPR006121	HMA_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg05707	Carg05707	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05707-RA.CDS.2	Carg05707-RA.CDS.2	CDS
Carg05707-RA.CDS.1	Carg05707-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05707-RA.five_prime_UTR.1	Carg05707-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05707-RA.exon.2	Carg05707-RA.exon.2	exon
Carg05707-RA.exon.1	Carg05707-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg05707-RA	Carg05707-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 33..87 e-value: 2.2E-13 score: 50.3
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 35..91 score: 9.83
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 35..90 e-value: 5.55139E-13 score: 59.1565
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 13..93 e-value: 6.2E-17 score: 63.5
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..153
None	No IPR available	PANTHER	PTHR22814:SF168	SUBFAMILY NOT NAMED	coord: 1..153
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	SSF55008	HMA, heavy metal-associated domain	coord: 27..93