Carg05665-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05665-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein of unknown function, DUF538
Location	Cucurbita_argyrosperma_scaffold_033 : 217637 .. 218753 (-)
Sequence length	571

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCACAAAACCCCATCAGCGTCCATCTCTCTCTGTCTCTCTCTGAAATTCTCCAGCCATGGCTCTGTTTCGCAGCCAGAATCTTAGCCTTTGGATCTCAATGATCTTGTTTTTGGGTTTTTGTTCTTGTTTTTGCTCTAATTCTAAGGACGATTCTTCAATTCATGAGCTTCTTCGATCCATGGGGCTGCCGGCGGGGCTTGTGCCGAAGCAAGTGAAGTCTTACACAGTGGCTGAAAATGGTCGGTTGGAAGTGTTCTTGGATGGTCCATGTATGGCTAAGTATGAAAACAGAGTGATTTTTGAGAGTGTTTTTAGTGCAAATCTTAGCTATGGGAGCTTGATTGGAGTGCAGGGAATGTCTCAAGAAGAGCTTTTTCTATGGCTCCCTGTTAAAGATATCATTGTTAATTATCCTACCTCCGGTGTGGTACTCATCGACATTGGTGTCGCTCATAAACAGCTCTCTCTGTCCCTCTTTGAAGATCCTCCTGATTGTAGTATCCCTCAAGGTGAATTCTCTTAGATCTCTTCGATTCTTATGGGTTTTGTTGATTTTGATTAATGGGTTCTTCCTGTTTTTCATCAGTTCTTCATCAATGGCTTCTCTTGCCTCTGTTTCCTCTGTTTCCTCTGTTTTTGTCTCTAAATTGATGGAGCTTTCCAAATCTGTCTTTAATGGCTTCTTTTGACCATATTTTCTCCTCTCTCTTTCAATCTAAATTGATGGGTTCTTCTTGTTCTTCATCTTTCTTTTCATTAATGGCTTCTCTTGGCTCTGTTTCCTCTGTTTCCTCTGTTTTTCTTCTCATTAATGGCTTCTTTCTATCTCCTCTGTTTCTTCTCTTCACAACTAACAGTTCAGCTCATTAATGGCTTCCATTCGTTCCATTTTTGGCGAGCTCCATTAATCTTTACATTCCCAAAACGTCTATGAGTTGAAAGTTAGAGACAAGAAAACATGGGAAACTTGCAGTTGAAAGCTCAAAGTTCATTATTTTTGGTTCTGTTTTGTAAAACATTATAGTAACCGAGTTTCTTTGTGTCTGGTTTTGCAGCTGCGTTCAGGAATCATCTCAGGAACCAAAGAGCCTTTGAATCTCTTAGATAAGAGAGCC

mRNA sequence

ATCACAAAACCCCATCAGCGTCCATCTCTCTCTGTCTCTCTCTGAAATTCTCCAGCCATGGCTCTGTTTCGCAGCCAGAATCTTAGCCTTTGGATCTCAATGATCTTGTTTTTGGGTTTTTGTTCTTGTTTTTGCTCTAATTCTAAGGACGATTCTTCAATTCATGAGCTTCTTCGATCCATGGGGCTGCCGGCGGGGCTTGTGCCGAAGCAAGTGAAGTCTTACACAGTGGCTGAAAATGGTCGGTTGGAAGTGTTCTTGGATGGTCCATGTATGGCTAAGTATGAAAACAGAGTGATTTTTGAGAGTGTTTTTAGTGCAAATCTTAGCTATGGGAGCTTGATTGGAGTGCAGGGAATGTCTCAAGAAGAGCTTTTTCTATGGCTCCCTGTTAAAGATATCATTGTTAATTATCCTACCTCCGGTGTGGTACTCATCGACATTGGTGTCGCTCATAAACAGCTCTCTCTGTCCCTCTTTGAAGATCCTCCTGATTGTAGTATCCCTCAAGCTGCGTTCAGGAATCATCTCAGGAACCAAAGAGCCTTTGAATCTCTTAGATAAGAGAGCC

Coding sequence (CDS)

ATGGCTCTGTTTCGCAGCCAGAATCTTAGCCTTTGGATCTCAATGATCTTGTTTTTGGGTTTTTGTTCTTGTTTTTGCTCTAATTCTAAGGACGATTCTTCAATTCATGAGCTTCTTCGATCCATGGGGCTGCCGGCGGGGCTTGTGCCGAAGCAAGTGAAGTCTTACACAGTGGCTGAAAATGGTCGGTTGGAAGTGTTCTTGGATGGTCCATGTATGGCTAAGTATGAAAACAGAGTGATTTTTGAGAGTGTTTTTAGTGCAAATCTTAGCTATGGGAGCTTGATTGGAGTGCAGGGAATGTCTCAAGAAGAGCTTTTTCTATGGCTCCCTGTTAAAGATATCATTGTTAATTATCCTACCTCCGGTGTGGTACTCATCGACATTGGTGTCGCTCATAAACAGCTCTCTCTGTCCCTCTTTGAAGATCCTCCTGATTGTAGTATCCCTCAAGCTGCGTTCAGGAATCATCTCAGGAACCAAAGAGCCTTTGAATCTCTTAGATAA

Protein sequence

MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAENGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR

Homology

[Close]

BLAST of Carg05665-RA vs. NCBI nr
Match: XP_022940173.1 (uncharacterized protein LOC111445879 [Cucurbita moschata])

HSP 1 Score: 341.7 bits (875), Expect = 1.5e-90
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE 60
           MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE
Sbjct: 1   MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE 60

Query: 61  NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYP 120
           NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYP
Sbjct: 61  NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYP 120

Query: 121 TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR
Sbjct: 121 TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 168

[Close]

BLAST of Carg05665-RA vs. NCBI nr
Match: XP_022981634.1 (uncharacterized protein LOC111480695 [Cucurbita maxima])

HSP 1 Score: 332.8 bits (852), Expect = 6.8e-88
Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE 60
           MALFRSQNLSLWISMILFLGFCSCFC NSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE
Sbjct: 1   MALFRSQNLSLWISMILFLGFCSCFCCNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE 60

Query: 61  NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYP 120
           NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGV+GMSQEELFLWLPVKDIIVNYP
Sbjct: 61  NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVNYP 120

Query: 121 TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAF N LRNQRAFESLR
Sbjct: 121 TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFGNRLRNQRAFESLR 168

[Close]

BLAST of Carg05665-RA vs. NCBI nr
Match: XP_022937405.1 (uncharacterized protein LOC111443705 [Cucurbita moschata])

HSP 1 Score: 266.5 bits (680), Expect = 6.0e-68
Identity = 141/169 (83.43%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 3   LFRSQNLSLWIS-MILFLGFC-SCFCSNS-KDDSSIHELLRSMGLPAGLVPKQVKSYTVA 62
           LF S N  + IS +ILF+GFC SC CSNS KD SSIH LLRSMGLPAGLVPKQVKSYT+ 
Sbjct: 4   LFGSWNSRIRISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSYTLG 63

Query: 63  ENGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNY 122
           EN RLEV+LDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVN 
Sbjct: 64  ENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVND 123

Query: 123 PTSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           P+SGV+LIDIGVAHKQLSLSLFEDPPDC+ PQAA RN LR +R FESLR
Sbjct: 124 PSSGVILIDIGVAHKQLSLSLFEDPPDCN-PQAALRNPLRKRRDFESLR 171

[Close]

BLAST of Carg05665-RA vs. NCBI nr
Match: XP_022976596.1 (uncharacterized protein LOC111476944 [Cucurbita maxima])

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 140/169 (82.84%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 3   LFRSQNLSLWIS-MILFLGFC-SCFCSNS-KDDSSIHELLRSMGLPAGLVPKQVKSYTVA 62
           LF S N  + IS +ILF+GFC SC CSNS KD SSIH LLRSMGLPAGLVPKQVKSYT+ 
Sbjct: 4   LFGSWNSRIRISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSYTLG 63

Query: 63  ENGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNY 122
           EN RLEV+LDGPCMAKYENRVIFESVFSANLSYGSLIGV+GMSQEELFLWLPVKDIIVN 
Sbjct: 64  ENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVND 123

Query: 123 PTSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           P+SGV+LIDIGVAHKQLSLSLFEDPPDC+ PQAA RN LR +R FESLR
Sbjct: 124 PSSGVILIDIGVAHKQLSLSLFEDPPDCN-PQAALRNPLRKRRDFESLR 171

[Close]

BLAST of Carg05665-RA vs. NCBI nr
Match: XP_023535139.1 (uncharacterized protein LOC111796654 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.1 bits (671), Expect = 6.6e-67
Identity = 139/169 (82.25%), Postives = 149/169 (88.17%), Query Frame = 0


Query: 3   LFRSQNLSLWIS-MILFLGFC-SCFCSNS-KDDSSIHELLRSMGLPAGLVPKQVKSYTVA 62
           LF S N  + IS +ILF+GFC SC CSNS KD SSIH LLRSMGLPAGLVPKQVKSYT+ 
Sbjct: 4   LFGSWNSRIRISIIILFVGFCSSCCCSNSPKDSSSIHSLLRSMGLPAGLVPKQVKSYTLG 63

Query: 63  ENGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNY 122
           EN RLEV+LDGPCMAKYENRVIFESVFSANLSYGSLIGV+GMSQEELFLWLPVKDIIVN 
Sbjct: 64  ENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVND 123

Query: 123 PTSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           P+SGV+LIDIGVAHKQLSLSLFEDPPDC+ PQAA  N LR +R FESLR
Sbjct: 124 PSSGVILIDIGVAHKQLSLSLFEDPPDCN-PQAALTNPLRKRRDFESLR 171

[Close]

BLAST of Carg05665-RA vs. TAIR10
Match: AT5G54530.1 (Protein of unknown function, DUF538)

HSP 1 Score: 171.4 bits (433), Expect = 4.7e-43
Identity = 80/133 (60.15%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 34  SIHELLRSMGLPAGLVPKQVKSYTVAENGRLEVFLDGPCMAKYENRVIFESVFSANLSYG 93
           ++H++LRS GLPAGL+P++V SY +  +GRLEVFL  PC AK+E  V FE+V   NLSYG
Sbjct: 28  TVHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLAAPCYAKFETNVHFEAVVRGNLSYG 87

Query: 94  SLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAA 153
           SL+GV+G+SQ+ELFLWL VKDI+V  P SGV++ DIGVA KQLSLSLFEDPP C  P   
Sbjct: 88  SLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDPPKCK-PDGV 147

Query: 154 FRNHLRNQRAFES 167
            +  +R  R FE+
Sbjct: 148 LKKKMRRDRGFEA 159

[Close]

BLAST of Carg05665-RA vs. TAIR10
Match: AT1G61667.1 (Protein of unknown function, DUF538)

HSP 1 Score: 155.2 bits (391), Expect = 3.5e-38
Identity = 80/139 (57.55%), Postives = 99/139 (71.22%), Query Frame = 0


Query: 13  ISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE-NGRLEVFLDGP 72
           +SM+L L     F + S   SSI  LL + GLP GL P  V+SY++ +  G LEV L  P
Sbjct: 1   MSMLLLLLLLVPFITPS-SQSSIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQLQNP 60

Query: 73  CMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGV 132
           C A++ENRV F+ V  ANLSYG L+G++G++QEELFLWLPVK I VN P+SG+VL DIGV
Sbjct: 61  CFARFENRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGV 120

Query: 133 AHKQLSLSLFEDPPDCSIP 151
           AHKQ+S SLFEDPP C  P
Sbjct: 121 AHKQISRSLFEDPPVCYPP 138

[Close]

BLAST of Carg05665-RA vs. TAIR10
Match: AT3G07460.2 (Protein of unknown function, DUF538)

HSP 1 Score: 119.8 bits (299), Expect = 1.6e-27
Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 31  DDSSIHELLRSMGLPAGLVPKQVKSYTV-AENGRLEVFLDGPCMAKYENRVIFESVFSAN 90
           ++ SI E+L + GLP GL PK VK +TV  E GR  V+L+  C AKYE  + ++ + S  
Sbjct: 26  ENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIVSGT 85

Query: 91  LSYGSLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDC 148
           + Y  +  + G+S +ELFLWL VK I V+ P+SG++  D+GV  KQ SLSLFE P DC
Sbjct: 86  IGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDC 143

[Close]

BLAST of Carg05665-RA vs. TAIR10
Match: AT5G16380.1 (Protein of unknown function, DUF538)

HSP 1 Score: 112.1 bits (279), Expect = 3.4e-25
Identity = 57/126 (45.24%), Postives = 82/126 (65.08%), Query Frame = 0


Query: 28  NSKDDSSIHELLRSMGLPAGLVPKQVKSYTV-AENGRLEVFLDGPCMAKYENRVIFESVF 87
           +S  D S ++ LR   LPAG+VPK V ++++  + GR  V L  PC AK+EN+  F+   
Sbjct: 24  SSLPDPSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPVPCDAKFENQFHFDYNI 83

Query: 88  SANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPD 147
           S  LS G +  + G++Q+ELFLW  VK I V+  +SG++  D+GVA KQLSLSLFE P D
Sbjct: 84  SGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGVADKQLSLSLFESPRD 143

Query: 148 CSIPQA 153
           C+  ++
Sbjct: 144 CTAAES 149

[Close]

BLAST of Carg05665-RA vs. TAIR10
Match: AT3G07470.1 (Protein of unknown function, DUF538)

HSP 1 Score: 111.7 bits (278), Expect = 4.4e-25
Identity = 50/118 (42.37%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 31  DDSSIHELLRSMGLPAGLVPKQVKSYTV-AENGRLEVFLDGPCMAKYENRVIFESVFSAN 90
           +  +I+E+L + GLP+G+ PK V+ +T   E GR  V+L+  C AKYE  + +++  +  
Sbjct: 27  ETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETEIHYDANITGT 86

Query: 91  LSYGSLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDC 148
           +    +  + G+S +ELFLW PVK I V+ P+SG++  D+GV  KQ SLSLFE P DC
Sbjct: 87  IGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRDC 144

[Close]

BLAST of Carg05665-RA vs. TrEMBL
Match: tr|A0A1S3BZT2|A0A1S3BZT2_CUCME (uncharacterized protein LOC103494976 OS=Cucumis melo OX=3656 GN=LOC103494976 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 6.5e-63
Identity = 126/160 (78.75%), Postives = 138/160 (86.25%), Query Frame = 0


Query: 9   LSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAENGRLEVFL 68
           + + I +IL +G CS    NS   SSIH LLRSMGLPAGLVPKQ KSYT+A+NGRLEV+L
Sbjct: 8   IQISILIILLMGLCSNCVQNS---SSIHSLLRSMGLPAGLVPKQAKSYTLAQNGRLEVYL 67

Query: 69  DGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLID 128
           D PCMAKYENRVIF++VFSANLSYGSLIGV+GMSQEELFLWLPVKDIIVNYPTSGV+LID
Sbjct: 68  DAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVNYPTSGVILID 127

Query: 129 IGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           IGVAHKQLSLSLFEDPPDC+ PQ   RN LR QR FESLR
Sbjct: 128 IGVAHKQLSLSLFEDPPDCN-PQVTLRNPLRRQRGFESLR 163

[Close]

BLAST of Carg05665-RA vs. TrEMBL
Match: tr|A0A0A0L7K3|A0A0A0L7K3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G399960 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 8.5e-63
Identity = 125/160 (78.12%), Postives = 138/160 (86.25%), Query Frame = 0


Query: 9   LSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAENGRLEVFL 68
           + + I +IL +G CS   +  +D SSIH LLRSMG PAGLVPKQ KSYT+AENGRLEV+L
Sbjct: 8   IQISILIILLMGLCS---NCVEDSSSIHSLLRSMGPPAGLVPKQAKSYTLAENGRLEVYL 67

Query: 69  DGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLID 128
           D PCMAKYENRVIF++VFSANLSYGSLIGV+GMSQEELFLWLPVKDIIVNYPTSGV+LID
Sbjct: 68  DAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVNYPTSGVILID 127

Query: 129 IGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           IGVAHKQLSLSLFEDPPDC+ PQ   RN LR QR FESLR
Sbjct: 128 IGVAHKQLSLSLFEDPPDCN-PQVTLRNPLRRQRGFESLR 163

[Close]

BLAST of Carg05665-RA vs. TrEMBL
Match: tr|A0A061F5S5|A0A061F5S5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_031177 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.5e-54
Identity = 107/168 (63.69%), Postives = 134/168 (79.76%), Query Frame = 0


Query: 1   MALFRSQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAE 60
           MA F S    ++++ +L+  F   FCS +   SSIH+LL S GLPAGL+PK+VKSYT++E
Sbjct: 1   MAFFSSNQSRVYLTRLLW--FFIFFCSLTLSSSSIHDLLVSRGLPAGLLPKEVKSYTLSE 60

Query: 61  NGRLEVFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYP 120
           NG LEVFLDGPC+ KYENRV F+SV  ANL+YGSLIGV G++QEELFLWLPVKDIIV+ P
Sbjct: 61  NGTLEVFLDGPCLTKYENRVFFDSVVRANLTYGSLIGVVGLTQEELFLWLPVKDIIVDDP 120

Query: 121 TSGVVLIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
            SG++L DIGVAHKQLSLSLFE+PPDC  PQ   +NH+R ++ FE++R
Sbjct: 121 KSGLILFDIGVAHKQLSLSLFEEPPDCK-PQGMLKNHVRKEKGFEAVR 165

[Close]

BLAST of Carg05665-RA vs. TrEMBL
Match: tr|A0A2I4H7V4|A0A2I4H7V4_9ROSI (uncharacterized protein LOC109014275 OS=Juglans regia OX=51240 GN=LOC109014275 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.5e-51
Identity = 100/140 (71.43%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 29  SKDDSSIHELLRSMGLPAGLVPKQVKSYTVAENGRLEVFLDGPCMAKYENRVIFESVFSA 88
           S  DSSIH+LLRS GLP GL+P++VKSYT+ ENG LEVFLDGPC+ K+ENRV F+SV  A
Sbjct: 25  SLSDSSIHDLLRSKGLPPGLLPREVKSYTLLENGTLEVFLDGPCLTKFENRVYFDSVVRA 84

Query: 89  NLSYGSLIGVQGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCS 148
           NL+YGSLIGV G+SQEELFLWLPVKDIIV+ P SG++L DIGVAHKQLSLSLFEDPP C 
Sbjct: 85  NLTYGSLIGVVGLSQEELFLWLPVKDIIVDDPRSGLILFDIGVAHKQLSLSLFEDPPSCK 144

Query: 149 IPQAAFRNHLRNQRAFESLR 169
            PQ A++NH R ++ FE +R
Sbjct: 145 -PQGAWKNHERKEKGFEVMR 163

[Close]

BLAST of Carg05665-RA vs. TrEMBL
Match: tr|V7AIF5|V7AIF5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G146900g PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.5e-51
Identity = 101/163 (61.96%), Postives = 127/163 (77.91%), Query Frame = 0


Query: 6   SQNLSLWISMILFLGFCSCFCSNSKDDSSIHELLRSMGLPAGLVPKQVKSYTVAENGRLE 65
           S  L +++S+ L+L F      +S    SIH+LLRS GLP GL+P++VKSYT ++NG LE
Sbjct: 10  SFTLFVFLSLQLYLSF------SSSSSPSIHDLLRSKGLPPGLLPEEVKSYTFSQNGHLE 69

Query: 66  VFLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDIIVNYPTSGVV 125
           VFLD PCM KYENRV+FE VF+ANL+YGSLIGV+G+ QEELF+WLPVKDIIVN P+SG++
Sbjct: 70  VFLDAPCMTKYENRVLFEQVFTANLTYGSLIGVEGLQQEELFVWLPVKDIIVNDPSSGLI 129

Query: 126 LIDIGVAHKQLSLSLFEDPPDCSIPQAAFRNHLRNQRAFESLR 169
           L DIG+AHKQ SLSLFEDPP C  P+   RNH+R ++  E LR
Sbjct: 130 LFDIGLAHKQFSLSLFEDPPHCK-PEGGLRNHVRKEKGLEVLR 165

The following BLAST results are available for this feature:

BLAST of Carg05665-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940173.1	1.5e-90	100.00	uncharacterized protein LOC111445879 [Cucurbita moschata]	[more]
XP_022981634.1	6.8e-88	97.62	uncharacterized protein LOC111480695 [Cucurbita maxima]	[more]
XP_022937405.1	6.0e-68	83.43	uncharacterized protein LOC111443705 [Cucurbita moschata]	[more]
XP_022976596.1	1.3e-67	82.84	uncharacterized protein LOC111476944 [Cucurbita maxima]	[more]
XP_023535139.1	6.6e-67	82.25	uncharacterized protein LOC111796654 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg05665-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54530.1	4.7e-43	60.15	Protein of unknown function, DUF538	[more]
AT1G61667.1	3.5e-38	57.55	Protein of unknown function, DUF538	[more]
AT3G07460.2	1.6e-27	47.46	Protein of unknown function, DUF538	[more]
AT5G16380.1	3.4e-25	45.24	Protein of unknown function, DUF538	[more]
AT3G07470.1	4.4e-25	42.37	Protein of unknown function, DUF538	[more]

BLAST of Carg05665-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg05665-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BZT2\|A0A1S3BZT2_CUCME	6.5e-63	78.75	uncharacterized protein LOC103494976 OS=Cucumis melo OX=3656 GN=LOC103494976 PE=...	[more]
tr\|A0A0A0L7K3\|A0A0A0L7K3_CUCSA	8.5e-63	78.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G399960 PE=4 SV=1	[more]
tr\|A0A061F5S5\|A0A061F5S5_THECC	5.5e-54	63.69	Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_031177 PE=4 ...	[more]
tr\|A0A2I4H7V4\|A0A2I4H7V4_9ROSI	1.5e-51	71.43	uncharacterized protein LOC109014275 OS=Juglans regia OX=51240 GN=LOC109014275 P...	[more]
tr\|V7AIF5\|V7AIF5_PHAVU	1.5e-51	61.96	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G146900g PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR036758	At5g01610-like
IPR007493	DUF538

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg05665	Carg05665	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg05665-RA	Carg05665-RA-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05665-RA.three_prime_UTR.1	Carg05665-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05665-RA.CDS.2	Carg05665-RA.CDS.2	CDS
Carg05665-RA.CDS.1	Carg05665-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05665-RA.five_prime_UTR.1	Carg05665-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05665-RA.exon.2	Carg05665-RA.exon.2	exon
Carg05665-RA.exon.1	Carg05665-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 36..142 e-value: 2.1E-24 score: 86.0
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 11..168
IPR036758	At5g01610-like superfamily	GENE3D	G3DSA:2.30.240.10		coord: 25..143 e-value: 5.7E-20 score: 73.5
IPR036758	At5g01610-like superfamily	SUPERFAMILY	SSF141562	At5g01610-like	coord: 11..147
None	No IPR available	PANTHER	PTHR31676:SF35	SUBFAMILY NOT NAMED	coord: 11..168
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..24 score: 5.0