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The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGCCTCCGGAAAAGCCTCATCAGCTTGCGTGCCATGCCATACAGCAAGCATTAGTTCTCCCTTTTTCTTCGATCTACTCTTGTCTTCGAGGCGATACCATTCTGCAGCCAATGGACTTTCGGGTGGAACTCGAGTAGGAACTTCATGAAGATCAAAGTACAAACGCCCAACATAATCATCTTTTAAGGTATCTTTGTCTTTAAGAGTAACTTCGAGCACTGTTGATTGCACAGTCATCCCTGTGAAGGCAAATACCTCATTCCATTCAGGATTTGAATTTTTTTCAAAATGCTTCGTAGTTCCCTTGAAGTTCCCAAGTTTCACTTCAACATAAGGATCTAAACCTCCAGTCAAATCCTTGGAAGGAAGATCACGGGCTTTCACGACTCGTACGAAAAGATATTGCATCTTTTCTACAAGTTCATGTGAACTTGCAGGTCTGTTACCAAGAGCGACACGACCTCGACCAACCATCCCACCACCAAGGTAAGGACTTGTCTCTCTAATTGAATAATCATTATATTTAAATGATGATCCTGGGTATGCCTGAACAGTATTTGCAACCATTGGCTCAGGCCTCATACCATATCCTCCATAGGTCACAGCTGGTGGTACAATCTGCTGCTGCTGCTGCTGCTGTTGCTCCAGGGGAGGCTGCTTTGCATTGGGAAGGTGATGGAATGTCTGTCTCGATCCAGTTTTATCGCTTGAAAACAGACTCGCTACGAAGTTTGGAACTTTCTGTGTCGTTGATTGGTGTTCAGATGCAATTGGAACCAGAAAAGGATTCTTTTCTACAGAAGATTCCACTGCAGGAAGTAAACTCGAAAGCTTTTTAGAAGGATCATCAGTTACATAGACCTTAAGGCCAAGCTCTCCTTTAGTTCGTGAGAAAATGCCTCGTTTTTCGAGAGGATAATGACAAAGAACAGCCTCAGCATACGAGACAAACGAGGTCCCAGTTAGACGAACTTTTCCGAGACAGGAAGGCTTCGGGCTGTTGCTGGCTCTGTTATAACAAAAGACAAAGGCCTCCAGAGAAAGTCTGGACAGATTTTGTGGATCTGATATGTTGAAGTAGAAGCTCTCATCCCAAATAGGATTGAGATCCTTCTCCTTAGTGGTGGTACGAACTCTTTGATTGTCAAAGTGAAGCTCAACAAAAGTATTGGCTGAGCCCTGCCCATCTTTTGGCATGAGATCATGAGCACCCACTACATCCACTCCTAGCTTGAGGCTACCCATTCAACGATCAACTTCCACACAGTTGGTTCAAGAAAATTCACCTGGAACTGAAACGAGGTATTTGCTTCATTACTATATCAAACTTCGTTTTTTTGTTCAATTTTATCTTTTCAAGTTTCCAATAATCAAATGGAACCATGTGATCTGTAGAACCAAAAATAAAAGTATCCACAAAATCCAAAACAAAGGAATAAAGGGATCGAATTCATTGAGGTTCCAGAATGAATCAAACATCCAAATATTGTAGAAAAAGTATATACAGAATCTTCAAAAAGAGAGATGAAAAATCCTTCAAAGCAAAATCATCACAAATTCTCTCCCAACTAAAACAAATCAAGAAAGAAAACCACGAAATTCCCCCAAGCGGAGTCTATCAATTTAGCTTCTTAAGCATCTTGACGCATAACATATTTCCTTCACAAACCAAGCATTCTCTAAATTCTCCTTGGACTTTTAACAAACACTTGGCGTGCAATATCCCTCCCCACCTCAAACCCAGATTCAGCAGCCCAAACCAGCCATTTCCTAACTAGAACATCTCTAAAATAATCAATCCCAGACATAAGAACCACTTCCATAGCTACTTTATACAACAAAAAAAGTCAAGGGAGGAACCAATTTCACAAAAACCATCATAATCATAATCTACACATAAAACTAAACCAGTTTGAAAATCCAGAAATTATTTCAAGCAACCAGATAGAAAATCACACAATCCACCGATAAAAAAGAAGTTAAACAATAGAACAAGAGCAAACAACGCACCTTCCCTGTTGTTGTCAGAAGAAAACGTTCCGAGTCAAAGAAGAAGGTGGAGGAGTCTCTCCGGTTGGCTTTAATGGAAGTTTTTCGAGAGGATCAAGGGAAAGAGATGAAGAGGATGAAAATCAAGTTGAAGTTGAAGTTGAAGTTCATCTCTGTTTGGAAGAGGAATGTTTTGGGAGAGAAGACGGAGAGGAAAGAGAGGTACGAAAGAGAGTTGAATTGTCTGAGTTTCAATATCGTTCATATTTGTATTTTTTCAAAAAAATAATTGAATTTTAAGTATAAGTTAAATGACGTGTAAATCACCCATTGGTGGAATTGCGTACTGGATTTCCTCTCGCGCCTAACAGCTTTCCTTGAGAGTTTCAATAATTTCTAAAACTTACTGCTGTCAGCTTTTACTTTTTACTTTTTTACGTACCGCATTCGGCTTCATGATTTTACACTCTTGTAAGGAATGTTTTGTTTTCTCATTCTCCACACTAACCGACGTGGGATCTTACAATTCGCTTTCCTTGTGGGTCAGCGTTCTCGTTGGCACACT mRNA sequence ATGCCTCCGGAAAAGCCTCATCAGCTTGCGTGCCATGCCATACAGCAAGCATTAGTTCTCCCTTTTTCTTCGATCTACTCTTGTCTTCGAGGCGATACCATTCTGCAGCCAATGGACTTTCGGGTGGAACTCGAGTCTGTTACCAAGAGCGACACGACCTCGACCAACCATCCCACCACCAAGGCCTCATACCATATCCTCCATAGGTCACAGCTGGTGGTACAATCTGCTGCTGCTGCTGCTGCTGTTGCTCCAGGGGAGGCTGCTTTGCATTGGGAAGGTGATGGAATGTCTGTCTCGATCCAGTTTTATCGCTTGAAAACAGACTCGCTACGAAGTTTGGAACTTTCTGTGTCGTTGATTGGTGTTCAGATGCAATTGGAACCAGAAAAGGATTCTTTTCTACAGAAGATTCCACTGCAGGAAAAGAAAACGTTCCGAGTCAAAGAAGAAGGTGGAGGAGTCTCTCCGGTTGGCTTTAATGGAAGTTTTTCGAGAGGATCAAGGGAAAGAGATGAAGAGGATGAAAATCAAGTTGAAGTTGAAGTTGAAGTTCATCTCTGTTTGGAAGAGGAATGTTTTGGGAGAGAAGACGGAGAGGAAAGAGAGGTACGAAAGAGAGTTGAATTGTCTGAGTTTCAATATCGTTCATATTTGTATTTTTTCAAAAAAATAATTGAATTTTAAGTATAAGTTAAATGACGTGTAAATCACCCATTGGTGGAATTGCGTACTGGATTTCCTCTCGCGCCTAACAGCTTTCCTTGAGAGTTTCAATAATTTCTAAAACTTACTGCTGTCAGCTTTTACTTTTTACTTTTTTACGTACCGCATTCGGCTTCATGATTTTACACTCTTGTAAGGAATGTTTTGTTTTCTCATTCTCCACACTAACCGACGTGGGATCTTACAATTCGCTTTCCTTGTGGGTCAGCGTTCTCGTTGGCACACT Coding sequence (CDS) ATGCCTCCGGAAAAGCCTCATCAGCTTGCGTGCCATGCCATACAGCAAGCATTAGTTCTCCCTTTTTCTTCGATCTACTCTTGTCTTCGAGGCGATACCATTCTGCAGCCAATGGACTTTCGGGTGGAACTCGAGTCTGTTACCAAGAGCGACACGACCTCGACCAACCATCCCACCACCAAGGCCTCATACCATATCCTCCATAGGTCACAGCTGGTGGTACAATCTGCTGCTGCTGCTGCTGCTGTTGCTCCAGGGGAGGCTGCTTTGCATTGGGAAGGTGATGGAATGTCTGTCTCGATCCAGTTTTATCGCTTGAAAACAGACTCGCTACGAAGTTTGGAACTTTCTGTGTCGTTGATTGGTGTTCAGATGCAATTGGAACCAGAAAAGGATTCTTTTCTACAGAAGATTCCACTGCAGGAAAAGAAAACGTTCCGAGTCAAAGAAGAAGGTGGAGGAGTCTCTCCGGTTGGCTTTAATGGAAGTTTTTCGAGAGGATCAAGGGAAAGAGATGAAGAGGATGAAAATCAAGTTGAAGTTGAAGTTGAAGTTCATCTCTGTTTGGAAGAGGAATGTTTTGGGAGAGAAGACGGAGAGGAAAGAGAGGTACGAAAGAGAGTTGAATTGTCTGAGTTTCAATATCGTTCATATTTGTATTTTTTCAAAAAAATAATTGAATTTTAA Protein sequence MPPEKPHQLACHAIQQALVLPFSSIYSCLRGDTILQPMDFRVELESVTKSDTTSTNHPTTKASYHILHRSQLVVQSAAAAAAVAPGEAALHWEGDGMSVSIQFYRLKTDSLRSLELSVSLIGVQMQLEPEKDSFLQKIPLQEKKTFRVKEEGGGVSPVGFNGSFSRGSRERDEEDENQVEVEVEVHLCLEEECFGREDGEEREVRKRVELSEFQYRSYLYFFKKIIEF
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
GO Assignments
This mRNA is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0008150 |
biological_process |
| cellular_component |
GO:0005575 |
cellular_component |
| molecular_function |
GO:0003674 |
molecular_function |
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| Carg05594 | Carg05594 | gene |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Carg05594-RA | Carg05594-RA-protein | polypeptide |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Carg05594-RA.three_prime_UTR.1 | Carg05594-RA.three_prime_UTR.1 | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Carg05594-RA.CDS.4 | Carg05594-RA.CDS.4 | CDS |
| Carg05594-RA.CDS.3 | Carg05594-RA.CDS.3 | CDS |
| Carg05594-RA.CDS.2 | Carg05594-RA.CDS.2 | CDS |
| Carg05594-RA.CDS.1 | Carg05594-RA.CDS.1 | CDS |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Carg05594-RA.exon.4 | Carg05594-RA.exon.4 | exon |
| Carg05594-RA.exon.3 | Carg05594-RA.exon.3 | exon |
| Carg05594-RA.exon.2 | Carg05594-RA.exon.2 | exon |
| Carg05594-RA.exon.1 | Carg05594-RA.exon.1 | exon |
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 152..178 |
| None | No IPR available | PROSITE | PS51257 | PROKAR_LIPOPROTEIN | coord: 1..28
score: 5.0 |
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