Carg05363-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05363-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF4228 domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_010 : 1408490 .. 1408978 (-)
Sequence length	489

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAACTGTTTGATCGTCCAACAAAACCCCATCAGAATCATGAAACCCGACGGCAAAATCCTCGAATACAAATCCCCAACAAGAGTATTCCAAGTCCTCTCCGACTTCTCCGGCCACGCCATCTCCGACGCCGTTCCAGTCACCCACCATCTCCAACAGACCACCAAGCTCCTCAGCGGCCACCTCTATTTCCTGATCCCCACGGCGGGGCCGGAGGCAGGGGAGAAAAGGGGGAAGAAGGCGGTTCGTTTTGCAGAGCCGGAGAAGGAAACCGGCGGCGGGGAAGGGAAGGTGATTAGAATAAAGGTAGTGATGACGAAGAAGGAGCTGGAGGAGATGGTTGAAAGAGGGGGAATTACGGCGGATGAAATGATTTGTAAGATCAAAAGTGGGAGTGGGGAAATTAGTTGCACAGAATTGGATGAGGAGTTGCACAAATGGAGGCCTTCTCTTCAGAGCATACCGGAAAGTGAAGTTGCTTGCTAG

mRNA sequence

ATGGGAAACTGTTTGATCGTCCAACAAAACCCCATCAGAATCATGAAACCCGACGGCAAAATCCTCGAATACAAATCCCCAACAAGAGTATTCCAAGTCCTCTCCGACTTCTCCGGCCACGCCATCTCCGACGCCGTTCCAGTCACCCACCATCTCCAACAGACCACCAAGCTCCTCAGCGGCCACCTCTATTTCCTGATCCCCACGGCGGGGCCGGAGGCAGGGGAGAAAAGGGGGAAGAAGGCGGTTCGTTTTGCAGAGCCGGAGAAGGAAACCGGCGGCGGGGAAGGGAAGGTGATTAGAATAAAGGTAGTGATGACGAAGAAGGAGCTGGAGGAGATGGTTGAAAGAGGGGGAATTACGGCGGATGAAATGATTTGTAAGATCAAAAGTGGGAGTGGGGAAATTAGTTGCACAGAATTGGATGAGGAGTTGCACAAATGGAGGCCTTCTCTTCAGAGCATACCGGAAAGTGAAGTTGCTTGCTAG

Coding sequence (CDS)

ATGGGAAACTGTTTGATCGTCCAACAAAACCCCATCAGAATCATGAAACCCGACGGCAAAATCCTCGAATACAAATCCCCAACAAGAGTATTCCAAGTCCTCTCCGACTTCTCCGGCCACGCCATCTCCGACGCCGTTCCAGTCACCCACCATCTCCAACAGACCACCAAGCTCCTCAGCGGCCACCTCTATTTCCTGATCCCCACGGCGGGGCCGGAGGCAGGGGAGAAAAGGGGGAAGAAGGCGGTTCGTTTTGCAGAGCCGGAGAAGGAAACCGGCGGCGGGGAAGGGAAGGTGATTAGAATAAAGGTAGTGATGACGAAGAAGGAGCTGGAGGAGATGGTTGAAAGAGGGGGAATTACGGCGGATGAAATGATTTGTAAGATCAAAAGTGGGAGTGGGGAAATTAGTTGCACAGAATTGGATGAGGAGTTGCACAAATGGAGGCCTTCTCTTCAGAGCATACCGGAAAGTGAAGTTGCTTGCTAG

Protein sequence

MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLSGHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVIRIKVVMTKKELEEMVERGGITADEMICKIKSGSGEISCTELDEELHKWRPSLQSIPESEVAC

Homology

[Close]

BLAST of Carg05363-RA vs. NCBI nr
Match: XP_022962863.1 (uncharacterized protein LOC111463230 [Cucurbita moschata])

HSP 1 Score: 311.2 bits (796), Expect = 2.0e-81
Identity = 157/170 (92.35%), Postives = 159/170 (93.53%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60
           MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS
Sbjct: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60

Query: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVIRIKVVMTKKELEEMVERGGI 120
           GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKV+RIKVVMTKKELEEMVERGGI
Sbjct: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI 120

Query: 121 TADEMICKIKSGSGEISCTELD--------EELHKWRPSLQSIPESEVAC 163
           TADEMICKIKSGSGEISC EL+          LHKWRPSLQSIPESEVAC
Sbjct: 121 TADEMICKIKSGSGEISCRELEXXXXXXXXXXLHKWRPSLQSIPESEVAC 170

[Close]

BLAST of Carg05363-RA vs. NCBI nr
Match: XP_022972617.1 (uncharacterized protein LOC111471158 [Cucurbita maxima])

HSP 1 Score: 302.8 bits (774), Expect = 7.2e-79
Identity = 153/168 (91.07%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60
           MGNCLIV+Q PIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHL+QTTKLLS
Sbjct: 1   MGNCLIVEQKPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLKQTTKLLS 60

Query: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVIRIKVVMTKKELEEMVERGGI 120
           GHLYFLIPTAG EA EKRGKKAVRFAEPEKETGGGEGKV+RIKVVMTKKELEEMVERGGI
Sbjct: 61  GHLYFLIPTAGAEAVEKRGKKAVRFAEPEKETGGGEGKVMRIKVVMTKKELEEMVERGGI 120

Query: 121 TADEMICKIKSGSGEISCTELD------EELHKWRPSLQSIPESEVAC 163
           TADEMICKIKSGSGEISC EL+       ELHKWRPSLQSIPESEVAC
Sbjct: 121 TADEMICKIKSGSGEISCRELEXXXXXXXELHKWRPSLQSIPESEVAC 168

[Close]

BLAST of Carg05363-RA vs. NCBI nr
Match: XP_023518412.1 (uncharacterized protein LOC111781910 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 9.4e-79
Identity = 154/170 (90.59%), Postives = 159/170 (93.53%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAIS-DAVPVTHHLQQTTKLL 60
           MGNCL+VQQNPIRIMKPDGKILEYKSP RVFQVLSDFSGHAIS DAVPVTHHLQQTTKLL
Sbjct: 1   MGNCLMVQQNPIRIMKPDGKILEYKSPIRVFQVLSDFSGHAISDDAVPVTHHLQQTTKLL 60

Query: 61  SGHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVIRIKVVMTKKELEEMVERGG 120
           SGHLYFLIPTAGPEAGEKRGKKAVRFA+PEKETGGGEGKV+RIKVVMTKKELEEMVERGG
Sbjct: 61  SGHLYFLIPTAGPEAGEKRGKKAVRFADPEKETGGGEGKVMRIKVVMTKKELEEMVERGG 120

Query: 121 ITADEMICKIKSGSGEISCTEL-------DEELHKWRPSLQSIPESEVAC 163
           ITAD+MI KIK+GSGEISC EL       DEELHKWRPSLQSIPESEVAC
Sbjct: 121 ITADQMISKIKTGSGEISCRELEEEEHDDDEELHKWRPSLQSIPESEVAC 170

[Close]

BLAST of Carg05363-RA vs. NCBI nr
Match: XP_022977419.1 (uncharacterized protein LOC111477765 [Cucurbita maxima])

HSP 1 Score: 244.2 bits (622), Expect = 3.0e-61
Identity = 125/165 (75.76%), Postives = 139/165 (84.24%), Query Frame = 0


Query: 3   NCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLSGH 62
           NCL V Q PIRIMK DGKILEYKSPTRVFQVLSDFSGH ISDAVPV+ HL  T KLL+GH
Sbjct: 5   NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKLLAGH 64

Query: 63  LYFLIPTAGPEAGEKRGKKAVRFAEPEK----ETGGGEGKVIRIKVVMTKKELEEMVERG 122
           LYFLIPT   EA EK+ KK VRFA+ EK    E GGG G+V+RIK+VMTKKEL+EMVERG
Sbjct: 65  LYFLIPT---EAAEKKPKKTVRFADSEKEESGENGGGTGRVVRIKLVMTKKELQEMVERG 124

Query: 123 GITADEMICKIKSGSGEISCTELDE-ELHKWRPSLQSIPESEVAC 163
           GI+ DEM+CKIKSGSGEISCTEL+E E  +W+P+LQSIPESEVAC
Sbjct: 125 GISGDEMVCKIKSGSGEISCTELEEAEEQRWKPALQSIPESEVAC 166

[Close]

BLAST of Carg05363-RA vs. NCBI nr
Match: XP_022133156.1 (uncharacterized protein LOC111005826 [Momordica charantia])

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 122/168 (72.62%), Postives = 138/168 (82.14%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFS-GHAISDAVPVTHHLQQTTKLL 60
           MGNCL V++ PIRIMK DGKILEYKSPTRVFQVLSDFS GHAI+DAVPVTHHL  + KLL
Sbjct: 1   MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL 60

Query: 61  SGHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGE---GKVIRIKVVMTKKELEEMVE 120
           SGHLYFLIPT      E++ KKAVRFA PEKETG GE   G+ IRIKVVMTKKELEEM+E
Sbjct: 61  SGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIE 120

Query: 121 RGGITADEMICKIKSGSGEISC-TELD-EELHKWRPSLQSIPESEVAC 163
            GGI  DEM+ KIKS SGEISC  EL+ EEL +W+P+L+SIPE+E+ C
Sbjct: 121 NGGIWGDEMMSKIKS-SGEISCRDELEKEELQRWKPALESIPETEIDC 167

[Close]

BLAST of Carg05363-RA vs. TAIR10
Match: AT5G03890.1 (unknown protein)

HSP 1 Score: 105.1 bits (261), Expect = 4.0e-23
Identity = 66/186 (35.48%), Postives = 99/186 (53.23%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60
           MGNCL++++  I+I++ DGK+LEY+ P  V  +L+ FSGH+IS       HL    KLLS
Sbjct: 1   MGNCLVMEKKVIKIVRDDGKVLEYREPISVHHILTQFSGHSISHN---NTHLLPDAKLLS 60

Query: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKE------------------TGGGEGK---V 120
           G LY+L+PT      +K+  K V FA PE E                    G + K   V
Sbjct: 61  GRLYYLLPTT---MTKKKVNKKVTFANPEVEGDERLLREEEDSSESNSNIDGDDTKNVTV 120

Query: 121 IRIKVVMTKKELEEMVERGGI------TADEMICKIKSGSGEISCTELDEELHKWRPSLQ 160
           +R+K+V+ K+ELE++++ G +      T ++ +    S   ++ C         WRP+L 
Sbjct: 121 VRMKIVVHKQELEKLLQGGSVHEMMYQTLEKQLLLTSSDDDDLECNS------GWRPALD 174

[Close]

BLAST of Carg05363-RA vs. TAIR10
Match: AT3G10120.1 (unknown protein)

HSP 1 Score: 102.1 bits (253), Expect = 3.4e-22
Identity = 64/178 (35.96%), Postives = 103/178 (57.87%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGH-AISDAVPVTHHLQQTTKLL 60
           MGNCL++++  I+IM+ DGK++EY+ P +V  +L+ FS H ++ D++    HL    KLL
Sbjct: 1   MGNCLVMEKKVIKIMRNDGKVVEYRGPMKVHHILTQFSPHYSLFDSLTNNCHLHPQAKLL 60

Query: 61  SGHLYFLIPTAGPEAGE-KRGKKAVRFAEPEKE---------------TGGGEGKVIRIK 120
            G LY+L+P         K+  K VRFA PE E               T      V+R+K
Sbjct: 61  CGRLYYLLPQETNSIKHMKKTMKKVRFANPEVEKEEQEEDRLTDCCDNTKEKTNGVVRVK 120

Query: 121 VVMTKKELEEMVERGGITADEMICKIKSGSGEISCTELDEELHK--WRPSLQSIPESE 160
           +V++K+ELE++++ G +   EM+   ++ + +  C + D+E HK  WRP L SIPE++
Sbjct: 121 MVVSKQELEKLLQGGSV--HEMV--YRTLAKQHLCDD-DDECHKEGWRPLLDSIPETD 173

[Close]

BLAST of Carg05363-RA vs. TAIR10
Match: AT3G21680.1 (unknown protein)

HSP 1 Score: 51.6 bits (122), Expect = 5.3e-07
Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 77  KRGKKAVRFAEPEKETGGGEGKVIRIKVVMTKKELEEMV-ERGGITADEMICKIKSGSG- 136
           + GK + R  E  + +   E KV+RIKVV+TKKEL +++  + GI + + +  +   SG 
Sbjct: 29  EEGKTSFRGEEESERSTEEESKVVRIKVVVTKKELRQILGHKNGINSIQQLVHVLKDSGR 88

Query: 137 EISCTELDEEL-----HKWRPSLQSIPES 159
            IS    +E+        WRP+L+SIPES
Sbjct: 89  NISMASYEEDEKEEGDENWRPTLESIPES 117

[Close]

BLAST of Carg05363-RA vs. TAIR10
Match: AT1G64700.1 (unknown protein)

HSP 1 Score: 44.3 bits (103), Expect = 8.4e-05
Identity = 30/80 (37.50%), Postives = 40/80 (50.00%), Query Frame = 0


Query: 1  MGNCLI------VQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAV-----PVT 60
          MGNCL        +   I+++K DG +LE+ SP     V   FSGHA+  AV     P+ 
Sbjct: 1  MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLWKPLA 60

Query: 61 H-HLQQTTKLLSGHLYFLIP 69
          H HL     L+ G  Y+L P
Sbjct: 61 HDHL-----LVPGQSYYLFP 75

[Close]

BLAST of Carg05363-RA vs. TAIR10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1))

HSP 1 Score: 43.5 bits (101), Expect = 1.4e-04
Identity = 21/73 (28.77%), Postives = 35/73 (47.95%), Query Frame = 0


Query: 1  MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPV------THHLQQ 60
          MGN ++V++N +++MK DG I   K+P        ++ G  + D+  V         L+ 
Sbjct: 1  MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query: 61 TTKLLSGHLYFLI 68
             L   H YFL+
Sbjct: 61 NQILKPNHTYFLV 73

[Close]

BLAST of Carg05363-RA vs. TrEMBL
Match: tr|A0A0A0KHH5|A0A0A0KHH5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452650 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.8e-55
Identity = 119/172 (69.19%), Postives = 131/172 (76.16%), Query Frame = 0


Query: 3   NCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLSGH 62
           NCL +   PIRIMK DGKILEYKSPTRVFQVLSDFSGH ISDAVPV+HHL +T KLLSGH
Sbjct: 5   NCLFIDNKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHEISDAVPVSHHLHRTAKLLSGH 64

Query: 63  LYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGKVIRIKVVMTKKELEEMVERGGITA 122
           LYFLIP    E  EK+ KKAVRFAEPEKET  G G V+RIKVVMTKKEL+EMVERGGI+A
Sbjct: 65  LYFLIP---KEPEEKKPKKAVRFAEPEKETATG-GGVVRIKVVMTKKELQEMVERGGISA 124

Query: 123 DEMICKIKSGSGEISCTE------------LDEELHKWRPSLQSIPESEVAC 163
           +EMICKIK+G GEIS                   L +W+P L+SIPESEVAC
Sbjct: 125 EEMICKIKNGCGEISSRSXXXXXXXXXXXXXXXXLQRWKPVLESIPESEVAC 172

[Close]

BLAST of Carg05363-RA vs. TrEMBL
Match: tr|A0A1S3CHA7|A0A1S3CHA7_CUCME (uncharacterized protein LOC103500900 OS=Cucumis melo OX=3656 GN=LOC103500900 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.4e-54
Identity = 119/173 (68.79%), Postives = 129/173 (74.57%), Query Frame = 0


Query: 3   NCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLSGH 62
           NCL V   PIRIMK DGKILEYKSPTRVFQVLSDFSGH ISDAVPVTHHL +T KLLSGH
Sbjct: 5   NCLFVDHKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHEISDAVPVTHHLHRTAKLLSGH 64

Query: 63  LYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGE--GKVIRIKVVMTKKELEEMVERGGI 122
           LYFLIP    E  EK+ KKAVRFAEPEKET      G V+RIKVVMTKKEL+EMVERGGI
Sbjct: 65  LYFLIP---KEPHEKKPKKAVRFAEPEKETASATTGGGVVRIKVVMTKKELQEMVERGGI 124

Query: 123 TADEMICKIKSGSGEIS-----------CTELDEELHKWRPSLQSIPESEVAC 163
           +A+EMICKIK+G GEIS                    +W+P L+SIPESEVAC
Sbjct: 125 SAEEMICKIKNGRGEISSXXXXXXXXXXXXXXXXXXQRWKPVLESIPESEVAC 174

[Close]

BLAST of Carg05363-RA vs. TrEMBL
Match: tr|I1L9D7|I1L9D7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100780937 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.2e-35
Identity = 77/163 (47.24%), Postives = 118/163 (72.39%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60
           MGNC+++Q+N +R+MK DGKILEYK+P +V QVL+ F GHAIS ++PV HHL   T+LL 
Sbjct: 1   MGNCIVLQENVVRVMKSDGKILEYKAPIKVHQVLNQFPGHAISKSLPVLHHLHPNTRLLK 60

Query: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGK---VIRIKVVMTKKELEEMVER 120
           G LY+L+P   P + +K  KK VRFAEP+ +    E K   V+RIK+V++K+EL+++V++
Sbjct: 61  GQLYYLVPPPQP-SPKKVNKKRVRFAEPDHDDDQVEDKGDEVVRIKLVLSKQELKDIVQK 120

Query: 121 GGITADEMICKI--KSGSGEIS-CTELDEELHKWRPSLQSIPE 158
           GGI+  E++  +  K   G++  CT +++  H W+P+L++IPE
Sbjct: 121 GGISVREVLSLVQGKGMDGDVDVCTRVNDGSHGWKPALETIPE 162

[Close]

BLAST of Carg05363-RA vs. TrEMBL
Match: tr|A0A0B2Q0K7|A0A0B2Q0K7_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_038756 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.2e-35
Identity = 77/163 (47.24%), Postives = 118/163 (72.39%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60
           MGNC+++Q+N +R+MK DGKILEYK+P +V QVL+ F GHAIS ++PV HHL   T+LL 
Sbjct: 1   MGNCIVLQENVVRVMKSDGKILEYKAPIKVHQVLNQFPGHAISKSLPVLHHLHPNTRLLK 60

Query: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGEGK---VIRIKVVMTKKELEEMVER 120
           G LY+L+P   P + +K  KK VRFAEP+ +    E K   V+RIK+V++K+EL+++V++
Sbjct: 61  GQLYYLVPPPQP-SPKKVNKKRVRFAEPDHDDDQVEDKGDEVVRIKLVLSKQELKDIVQK 120

Query: 121 GGITADEMICKI--KSGSGEIS-CTELDEELHKWRPSLQSIPE 158
           GGI+  E++  +  K   G++  CT +++  H W+P+L++IPE
Sbjct: 121 GGISVREVLSLVQGKGMDGDVDVCTRVNDGSHGWKPALETIPE 162

[Close]

BLAST of Carg05363-RA vs. TrEMBL
Match: tr|I1LZK6|I1LZK6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100793955 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.2e-35
Identity = 80/163 (49.08%), Postives = 118/163 (72.39%), Query Frame = 0


Query: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAV-PVTHHLQQTTKLL 60
           MGNC+++Q+N +R+MK DGKILEYK+P RV QVL+ F GHAIS+++ PV HHL   T+LL
Sbjct: 1   MGNCIVLQRNVVRVMKSDGKILEYKAPIRVHQVLNQFRGHAISESLPPVLHHLNPYTRLL 60

Query: 61  SGHLYFLIPTAGPEAGEKR-GKKAVRFAEP-EKETGGGEGKVIRIKVVMTKKELEEMVER 120
            G LY+L+P   P+A  K+  KK VRFAEP E +    +G V+RIK+V++K+EL++MV++
Sbjct: 61  KGQLYYLVPP--PQASSKKVNKKRVRFAEPDEDDQVEDKGCVVRIKLVLSKQELKDMVQK 120

Query: 121 GGITADEMICKIKSG---SGEISCTELDEELHKWRPSLQSIPE 158
           GGI+ +E++  ++      G  +C   DE  H W+P+L++IPE
Sbjct: 121 GGISVNEVLSLVQGKGIVGGVDACRRDDEGFHGWKPALETIPE 161

The following BLAST results are available for this feature:

BLAST of Carg05363-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962863.1	2.0e-81	92.35	uncharacterized protein LOC111463230 [Cucurbita moschata]	[more]
XP_022972617.1	7.2e-79	91.07	uncharacterized protein LOC111471158 [Cucurbita maxima]	[more]
XP_023518412.1	9.4e-79	90.59	uncharacterized protein LOC111781910 [Cucurbita pepo subsp. pepo]	[more]
XP_022977419.1	3.0e-61	75.76	uncharacterized protein LOC111477765 [Cucurbita maxima]	[more]
XP_022133156.1	1.3e-56	72.62	uncharacterized protein LOC111005826 [Momordica charantia]	[more]

BLAST of Carg05363-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G03890.1	4.0e-23	35.48	unknown protein	[more]
AT3G10120.1	3.4e-22	35.96	unknown protein	[more]
AT3G21680.1	5.3e-07	37.08	unknown protein	[more]
AT1G64700.1	8.4e-05	37.50	unknown protein	[more]
AT5G37840.1	1.4e-04	28.77	BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT...	[more]

BLAST of Carg05363-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg05363-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KHH5\|A0A0A0KHH5_CUCSA	4.8e-55	69.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452650 PE=4 SV=1	[more]
tr\|A0A1S3CHA7\|A0A1S3CHA7_CUCME	2.4e-54	68.79	uncharacterized protein LOC103500900 OS=Cucumis melo OX=3656 GN=LOC103500900 PE=...	[more]
tr\|I1L9D7\|I1L9D7_SOYBN	3.2e-35	47.24	Uncharacterized protein OS=Glycine max OX=3847 GN=100780937 PE=4 SV=1	[more]
tr\|A0A0B2Q0K7\|A0A0B2Q0K7_GLYSO	3.2e-35	47.24	Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_038756 PE=4 SV=1	[more]
tr\|I1LZK6\|I1LZK6_SOYBN	7.2e-35	49.08	Uncharacterized protein OS=Glycine max OX=3847 GN=100793955 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg05363	Carg05363	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05363-RA.CDS.1	Carg05363-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05363-RA.exon.1	Carg05363-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg05363-RA	Carg05363-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..157 e-value: 3.4E-17 score: 63.4
None	No IPR available	PANTHER	PTHR33148:SF28	SUBFAMILY NOT NAMED	coord: 1..158
None	No IPR available	PANTHER	PTHR33148	FAMILY NOT NAMED	coord: 1..158