Carg04734-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04734-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Eukaryotic translation initiation factor 3 subunit G
Location	Cucurbita_argyrosperma_scaffold_028 : 660556 .. 661989 (+)
Sequence length	803

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGCTTTCCTCCTCGGTCGCTTGCCCTAGCGACTAGCATCTCCAATTCTGCGTTCTCTCTTCGCATTCCGCAAGCCTCTGCCTCTCAATCCTCCATTATCTGCATCATGGCTCAGACGGCAAGTCGATCCAAATTGCGGTGGGGAGAGCTAGATGACGATGACGGCGATCTGGATTTTCTTCTACCTCCCAAGAAAATTATTGGTCCAGATGAGAATGGCTTGAAGAGAACTATTGAATATCAGTTTAACGAAGATGGTAATAAGGTTAAGATCACAACCACCTCGCGTACTCGCAAGCTCGCTCATGCTCGCCTCAGTAAACACGCCATTGAGCGTCGATCTTGGGCGAAGTTTGGTGACGCTGTGCACGAAGATGTTGGCAGCCGCCTCACTATGGTCTCCACCGAGGAGATCCTTCTGGAACGCCCTCGTGCTCCTGGTCTGTTTTCGATAAATCTAGATTTAAACTATTCATTGCCGTTGGTAGATTTTGGAAATGTTAGTATATGATTTCTGTTGCAGCGCATACTTGCTTATAAATTCGTCTCTAAATGTGCCGTTTTCTCCCATGTGGGAGAGCATAAATATTTCTCTAATAACTGCAGAATATGTTGATAAACTGGGTGCTTCATTATTGAAAGCGTGTGAATGTATTTGGTTTGTATCTGAAACAAGGTAGAGATAGGTCACTTTTCGATGCCAGGAGGATAGTGGCATAGAATTTGCAGAACTGTGCTTTTTTGTTTCGTGCTTTTAGGAATTTCAGGCTTGTGTTTGGAGTTGAACTGAATAATTCCAATGATCGATTGTTGTTTTCTCTAGAGAATACTCAAATAATATCCTCTTGACAAAGGATACACGACATCTTTGAAATCACTCTGTGATTATTAATTTTTTTTTTTTTTTTACTTCGGTTTTGCGAATTTGCATTTGCACTTTTCATAGGCATTGTTTTTGTATGTGCCCATTTAACACCCTGCTCGCATTAGTCCTTTTCTGGAAAAATTAGAAGCATATGTTTTTTGCCTTATTCCTATAGATTTTCTTCTGAGGAATGAAAATGATTACAGGTAGCAAACCAGAAGAGCCGAAGGTTGCAGGAGACCCTCTAGCTCAACTTGGAAAAGGTGGTGCTGTTCTTATGGTATGTAGGACTTGTGGCAAAAAGGGTGACCACTGGACCTCAAGGTGTCCTTACAAGGACTTGGCACTACAAGGCGAGGGATTGGATAAGGCTGCCGCACCAGAGGCGACAGCTGCTGCTCCAGGTGGTGCAACGAAGGGAACATATGTTCCTCCAGGTATGAGAGCAGGGGCAGACAGGACCGGAACCGATATGAGACGTAGGAACGATGAGAACTCTGTTCGTGTCACCAACCTCTCAGAGGACACAAGAGAGCCTGACCATGCTATACTCTTCAAGGTCGTGTGA

mRNA sequence

TATGCTTTCCTCCTCGGTCGCTTGCCCTAGCGACTAGCATCTCCAATTCTGCGTTCTCTCTTCGCATTCCGCAAGCCTCTGCCTCTCAATCCTCCATTATCTGCATCATGGCTCAGACGGCAAGTCGATCCAAATTGCGGTGGGGAGAGCTAGATGACGATGACGGCGATCTGGATTTTCTTCTACCTCCCAAGAAAATTATTGGTCCAGATGAGAATGGCTTGAAGAGAACTATTGAATATCAGTTTAACGAAGATGGTAATAAGGTTAAGATCACAACCACCTCGCGTACTCGCAAGCTCGCTCATGCTCGCCTCAGTAAACACGCCATTGAGCGTCGATCTTGGGCGAAGTTTGGTGACGCTGTGCACGAAGATGTTGGCAGCCGCCTCACTATGGTCTCCACCGAGGAGATCCTTCTGGAACGCCCTCGTGCTCCTGGTAGCAAACCAGAAGAGCCGAAGGTTGCAGGAGACCCTCTAGCTCAACTTGGAAAAGGTGGTGCTGTTCTTATGGTATGTAGGACTTGTGGCAAAAAGGGTGACCACTGGACCTCAAGGTGTCCTTACAAGGACTTGGCACTACAAGGCGAGGGATTGGATAAGGCTGCCGCACCAGAGGCGACAGCTGCTGCTCCAGGTGGTGCAACGAAGGGAACATATGTTCCTCCAGGTATGAGAGCAGGGGCAGACAGGACCGGAACCGATATGAGACGTAGGAACGATGAGAACTCTGTTCGTGTCACCAACCTCTCAGAGGACACAAGAGAGCCTGACCATGCTATACTCTTCAAGGTCGTGTGA

Coding sequence (CDS)

ATGGCTCAGACGGCAAGTCGATCCAAATTGCGGTGGGGAGAGCTAGATGACGATGACGGCGATCTGGATTTTCTTCTACCTCCCAAGAAAATTATTGGTCCAGATGAGAATGGCTTGAAGAGAACTATTGAATATCAGTTTAACGAAGATGGTAATAAGGTTAAGATCACAACCACCTCGCGTACTCGCAAGCTCGCTCATGCTCGCCTCAGTAAACACGCCATTGAGCGTCGATCTTGGGCGAAGTTTGGTGACGCTGTGCACGAAGATGTTGGCAGCCGCCTCACTATGGTCTCCACCGAGGAGATCCTTCTGGAACGCCCTCGTGCTCCTGGTAGCAAACCAGAAGAGCCGAAGGTTGCAGGAGACCCTCTAGCTCAACTTGGAAAAGGTGGTGCTGTTCTTATGGTATGTAGGACTTGTGGCAAAAAGGGTGACCACTGGACCTCAAGGTGTCCTTACAAGGACTTGGCACTACAAGGCGAGGGATTGGATAAGGCTGCCGCACCAGAGGCGACAGCTGCTGCTCCAGGTGGTGCAACGAAGGGAACATATGTTCCTCCAGGTATGAGAGCAGGGGCAGACAGGACCGGAACCGATATGAGACGTAGGAACGATGAGAACTCTGTTCGTGTCACCAACCTCTCAGAGGACACAAGAGAGCCTGACCATGCTATACTCTTCAAGGTCGTGTGA

Protein sequence

MAQTASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTSRTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGLDKAAAPEATAAAPGGATKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDHAILFKVV

Homology

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BLAST of Carg04734-RA vs. NCBI nr
Match: XP_022924193.1 (eukaryotic translation initiation factor 3 subunit G-like [Cucurbita moschata] >XP_023001143.1 eukaryotic translation initiation factor 3 subunit G-like [Cucurbita maxima] >XP_023520397.1 eukaryotic translation initiation factor 3 subunit G-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.8 bits (1161), Expect = 1.4e-123
Identity = 225/229 (98.25%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MAQTASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTS 60
           MAQTASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTS
Sbjct: 1   MAQTASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTS 60

Query: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGLDKAAAPEATAAAPGGA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGLDKAAAPEATAAAPGGA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGLDKAAAPEATAAAPGGA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDHAILFK 230
           TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPD   LF+
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFR 229

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BLAST of Carg04734-RA vs. NCBI nr
Match: XP_004137389.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sativus] >KGN63960.1 hypothetical protein Csa_1G031810 [Cucumis sativus])

HSP 1 Score: 435.3 bits (1118), Expect = 1.3e-118
Identity = 215/229 (93.89%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MAQTASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTS 60
           MAQ ASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENG+K+ IEYQFNEDGNKVKITTT+
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKVIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGLDKAAAPEATAAAPGGA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA QGEGLDKA APEA AAAPGGA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATAPEAAAAAPGGA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDHAILFK 230
           TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPD   LF+
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFR 229

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BLAST of Carg04734-RA vs. NCBI nr
Match: XP_008437366.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis melo])

HSP 1 Score: 433.3 bits (1113), Expect = 5.1e-118
Identity = 214/229 (93.45%), Postives = 220/229 (96.07%), Query Frame = 0


Query: 1   MAQTASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTS 60
           MAQ ASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENG+K+ IEYQFNEDGNKVKITTT+
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKIIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGLDKAAAPEATAAAPGGA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA QGEGLDKA  PEA AAAPGGA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATTPEAAAAAPGGA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDHAILFK 230
           TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPD   LF+
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFR 229

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BLAST of Carg04734-RA vs. NCBI nr
Match: XP_022137509.1 (eukaryotic translation initiation factor 3 subunit G-like [Momordica charantia])

HSP 1 Score: 432.2 bits (1110), Expect = 1.1e-117
Identity = 216/229 (94.32%), Postives = 220/229 (96.07%), Query Frame = 0


Query: 1   MAQTASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTS 60
           MAQTASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLK+ IEYQFNEDGNKVKITTT+
Sbjct: 1   MAQTASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGLDKAAAPEATAAAPGGA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA Q EGLDK AAPEA AAAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQAEGLDKTAAPEAAAAAP-GA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDHAILFK 230
           TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPD   LF+
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFR 228

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BLAST of Carg04734-RA vs. NCBI nr
Match: XP_022143427.1 (eukaryotic translation initiation factor 3 subunit G-like [Momordica charantia])

HSP 1 Score: 417.5 bits (1072), Expect = 2.9e-113
Identity = 206/229 (89.96%), Postives = 215/229 (93.89%), Query Frame = 0


Query: 1   MAQTASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTS 60
           M Q  + SKLRWGELDDDD DLDFLLPPKK+IGPDENGLK+T+EYQFNEDGNKVKITTTS
Sbjct: 1   MVQPTNPSKLRWGELDDDDSDLDFLLPPKKVIGPDENGLKKTVEYQFNEDGNKVKITTTS 60

Query: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGLDKAAAPEATAAAPGGA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA Q +GLDKA APEAT AAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKAVAPEATTAAP-GA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDHAILFK 230
           TKGTYVPPG+R GA+RTGTDMRRRNDENSVRVTNLSEDTREPD   LF+
Sbjct: 181 TKGTYVPPGLRPGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFR 228

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BLAST of Carg04734-RA vs. TAIR10
Match: AT3G11400.2 (eukaryotic translation initiation factor 3G1)

HSP 1 Score: 290.0 bits (741), Expect = 1.3e-78
Identity = 159/252 (63.10%), Postives = 183/252 (72.62%), Query Frame = 0


Query: 8   SKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTSRTRKLAH 67
           SK RWGE+D+D+ DLDFLLPPK++IGPDENGLK TIEY+FN++ NKVKITT +R RKLA 
Sbjct: 10  SKFRWGEMDEDE-DLDFLLPPKQVIGPDENGLKTTIEYKFNDEENKVKITTRTRVRKLAS 69

Query: 68  ARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPG--------------- 127
           ARL+K A+ERR+W KFGDA +E+ GS LTMVSTEEILLERPRAPG               
Sbjct: 70  ARLNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRAPGDQLANHMLASIPEYE 129

Query: 128 ------------SKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQ 187
                       +K +E K  GD L+QLGKGGAVLMVCR C KKGDHWTS+CPYKDLA  
Sbjct: 130 LKCALTFVAANCTKADESKATGDGLSQLGKGGAVLMVCRICHKKGDHWTSKCPYKDLAAP 189

Query: 188 GE-GLDKAAAPE-ATAAAPGGATKGTYVPPGMRAGADRT--GTDMRRRNDENSVRVTNLS 229
            +  +DK    E +T +A  G  K  YVPP MRAGADR+  G+DMRRRNDENSVRVTNLS
Sbjct: 190 TDVFIDKPPTGESSTMSAAPGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNLS 249

[Close]

BLAST of Carg04734-RA vs. TAIR10
Match: AT5G06000.1 (eukaryotic translation initiation factor 3G2)

HSP 1 Score: 263.8 bits (673), Expect = 9.6e-71
Identity = 137/223 (61.43%), Postives = 167/223 (74.89%), Query Frame = 0


Query: 9   KLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTSRTRKLAHA 68
           KLRWGE+D+++GD DFLLPPK++I PD+NG+K+ IEY+FNE+  KVKITTT+R +K A  
Sbjct: 11  KLRWGEIDEEEGDYDFLLPPKQMISPDQNGVKKVIEYKFNEEDKKVKITTTTRVQKRA-- 70

Query: 69  RLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQL 128
            L+K A+ERRSW KFGDA HE+  S LTM STE+I+LER RAPGS  E+  V+GD ++QL
Sbjct: 71  -LTKQAVERRSWNKFGDAAHEESSSYLTMRSTEDIILERIRAPGSNAEQSTVSGDSMSQL 130

Query: 129 GKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGLDKAAAPEATAAAPGGATKGTYVPP 188
           GK GAVLMVCR C KKGDHWTSRCP KDL      +D+    E + +   G  +  YVPP
Sbjct: 131 GKPGAVLMVCRLCQKKGDHWTSRCPQKDLL---SLMDEPLTAETSTSTITGTGRAAYVPP 190

Query: 189 GMRAGADRT--GTDMRRRNDENSVRVTNLSEDTREPDHAILFK 230
            MR GADR   G+DMR R+DENSVRVTNLSEDTR PD   LF+
Sbjct: 191 SMREGADRKAGGSDMRSRHDENSVRVTNLSEDTRGPDLMELFR 227

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BLAST of Carg04734-RA vs. Swiss-Prot
Match: sp|Q6DRC4|EIF3G_DANRE (Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio OX=7955 GN=eif3g PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-24
Identity = 82/237 (34.60%), Postives = 117/237 (49.37%), Query Frame = 0


Query: 8   SKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTSRTRKLAH 67
           SK  W +  +++GD   L  PK+ +   +  +K   EY+ ++DG K KI    RT K+  
Sbjct: 9   SKPSWADQVEEEGDEGSLPSPKETV---KGNIKTVTEYKIDDDGQKFKII---RTFKIET 68

Query: 68  ARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQ 127
            + SK    R++W KFG++ ++  G  +   +  + +     +            DP+ +
Sbjct: 69  RKASKAVARRKNWKKFGNSEYDAPGPNVATTTVSDDVFMTFISSKEDLNAQDQDEDPMNK 128

Query: 128 LGKGGAVLMVCRTCGKKGDHWTSRCPYKD------------LALQGEGLDKAAAPEATAA 187
           L   G  ++ CR C  KGDHWT+RCPYKD            L L     +KAA PE   A
Sbjct: 129 L--KGQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKAAEPE--PA 188

Query: 188 APGGATKGTYVPPGMRAGADRTGTDM---RRRNDENSVRVTNLSEDTREPDHAILFK 230
            P     G YVPP +R G  R G  M   RR +D  ++RVTNLSEDTRE D   LF+
Sbjct: 189 QPVQNKTGKYVPPSLRDGGTRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFR 233

[Close]

BLAST of Carg04734-RA vs. Swiss-Prot
Match: sp|A7SKE9|EIF3G_NEMVE (Eukaryotic translation initiation factor 3 subunit G OS=Nematostella vectensis OX=45351 GN=v1g171563 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.5e-23
Identity = 84/245 (34.29%), Postives = 122/245 (49.80%), Query Frame = 0


Query: 2   AQTASRSKLRWGELDDDDGD--LDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTT 61
           A   +  K  W +L D+ G+  L   +PP   +   EN  K   EY+ +++G   KI TT
Sbjct: 4   ADNDTDEKPSWADLVDEAGETGLTGQIPPSSEVREGEN--KIVTEYKRDDEGKLQKIITT 63

Query: 62  SRTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEE----ILLERPRAPGSKP 121
            R       R++K   +R+ W KFGD+ ++  G   T  +  +    IL      P +  
Sbjct: 64  YRVET---RRVAKEIAKRKLWKKFGDSKNDKPGPNKTTTNVCDDVFLILTSNKENPDATE 123

Query: 122 EEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD-------LALQGEGLDKAA 181
           E      DPL +L   G  ++ CR C  KGDHWT++CPYKD          + +G  +  
Sbjct: 124 E------DPLKKL--SGQKIVQCRIC--KGDHWTTKCPYKDQLEVIHQQLKEDDGSGQPG 183

Query: 182 APEATAAAPGGA-TKGTYVPPGMRAGADRTGTDM---RRRNDENSVRVTNLSEDTREPDH 230
            P +  A P  A T G YV PG+R GA+R G  M    +R++  ++RVTNLSE+TRE D 
Sbjct: 184 TPPSEPANPAAASTSGKYVAPGLRDGANRRGETMPSRSQRDETATIRVTNLSEETRESDL 233

[Close]

BLAST of Carg04734-RA vs. Swiss-Prot
Match: sp|Q28CY2|EIF3G_XENTR (Eukaryotic translation initiation factor 3 subunit G OS=Xenopus tropicalis OX=8364 GN=eif3g PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.7e-22
Identity = 86/253 (33.99%), Postives = 124/253 (49.01%), Query Frame = 0


Query: 8   SKLRWGELDDDDG-DLDFLLPPKKIIGPDE------------NGLKRTI-EYQFNEDGNK 67
           SK  W +  +++G D + + PP   +  D             NG  +TI EY+ N++G K
Sbjct: 8   SKPSWADQVEEEGIDPEPISPPVTKVQQDPASFVLDTPQEVINGKIKTITEYKLNDEGKK 67

Query: 68  VKITTTSRTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRL--TMVSTEEILLERPRAP 127
           +KI    RT K+   + SK    R++W KFG++ ++  G  +  T VS + ++       
Sbjct: 68  IKIV---RTFKIETLKASKVVAHRKNWKKFGNSEYDPPGPNVATTTVSDDVLMTFITSKE 127

Query: 128 GSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD------------LAL 187
               +E +   DP+ +L   G  ++ CR C  KGDHWT+RCPYKD            L L
Sbjct: 128 DLNNQEEE---DPMNKL--KGQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGL 187

Query: 188 QGEGLDKAAAPEATAAAPGGATKGTYVPPGMRAGADRTGTDM---RRRNDENSVRVTNLS 230
                +KA   E   A    +  G YVPP +R G  R G  M   RR +D  ++RVTNLS
Sbjct: 188 STGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNLS 247

[Close]

BLAST of Carg04734-RA vs. Swiss-Prot
Match: sp|Q6DJI8|EI3GA_XENLA (Eukaryotic translation initiation factor 3 subunit G-A OS=Xenopus laevis OX=8355 GN=eif3g-a PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-21
Identity = 77/219 (35.16%), Postives = 110/219 (50.23%), Query Frame = 0


Query: 28  PKKIIGPDENGLKRTIEYQFNEDGNKVKITTTSRTRKLAHARLSKHAIERRSWAKFGDAV 87
           P+++I      +K   EY+ N+D   VKI    RT K+   + SK   +R++W KFG++ 
Sbjct: 43  PREVI---NGNIKTITEYKLNDDDKTVKIV---RTFKIETVKASKVVAQRKNWKKFGNSE 102

Query: 88  HEDVGSRL--TMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKG 147
           ++  G  +  T VS + ++           +E +   DP+ +L   G  ++ CR C  KG
Sbjct: 103 YDPPGPNVATTTVSDDVLMTFITNKEDLNNQEEE---DPMNKL--KGQKIVSCRIC--KG 162

Query: 148 DHWTSRCPYKD------------LALQGEGLDKAAAPEATAAAPGGATKGTYVPPGMRAG 207
           DHWT+RCPYKD            L L     +KA   E   A    +  G YVPP +R G
Sbjct: 163 DHWTTRCPYKDTLGPMQKELAEQLGLSTGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDG 222

Query: 208 ADRTGTDM---RRRNDENSVRVTNLSEDTREPDHAILFK 230
             R G  M   RR +D  ++RVTNLSEDTRE D   LF+
Sbjct: 223 GSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFR 248

[Close]

BLAST of Carg04734-RA vs. Swiss-Prot
Match: sp|B3MYX2|EI3G1_DROAN (Eukaryotic translation initiation factor 3 subunit G-1 OS=Drosophila ananassae OX=7217 GN=eIF3g1 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.8e-21
Identity = 76/218 (34.86%), Postives = 116/218 (53.21%), Query Frame = 0


Query: 18  DDGDLDF--LLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTSRTRKLAHARLSKHAI 77
           D+ +LD+  L P  + +   ENG K   EY++N+D  K K+    RT K++   + K   
Sbjct: 13  DEVELDYGGLPPTTETV---ENGHKYVTEYKYNKDDKKTKVV---RTYKISKQVVPKTVA 72

Query: 78  ERRSWAKFGDAVHEDVG--SRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGA 137
           +RR+W KFG++ ++  G  S+ TMVS EEI+++   +     +E + A DPL    K   
Sbjct: 73  KRRTWTKFGESKNDKPGPNSQTTMVS-EEIIMQFLNS-----KEDEKANDPLLDPTKN-- 132

Query: 138 VLMVCRTCGKKGDHWTSRCPYKDLALQGEGLDKAAAPEATAAAPGGATKGTYVPPGMRAG 197
            +  CR C   G+HW+  CPYK  A+    ++K A   A AAA      G YVPP ++  
Sbjct: 133 -IAKCRIC--NGEHWSVNCPYKGTAMDTNMMEKKAT-AAAAAAVDAPKSGKYVPPFLKDS 192

Query: 198 ADRTGTDMRRRNDENSVRVTNLSEDTREPDHAILFKVV 232
             + G  MR R+D  ++R++NLSE   E D   L K +
Sbjct: 193 VGKVGMGMRGRDDTAAIRISNLSESMTEADLEELVKKI 212

[Close]

BLAST of Carg04734-RA vs. TrEMBL
Match: tr|A0A0A0LPX8|A0A0A0LPX8_CUCSA (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus OX=3659 GN=Csa_1G031810 PE=3 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 8.8e-119
Identity = 215/229 (93.89%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MAQTASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTS 60
           MAQ ASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENG+K+ IEYQFNEDGNKVKITTT+
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKVIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGLDKAAAPEATAAAPGGA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA QGEGLDKA APEA AAAPGGA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATAPEAAAAAPGGA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDHAILFK 230
           TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPD   LF+
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFR 229

[Close]

BLAST of Carg04734-RA vs. TrEMBL
Match: tr|A0A1S3ATV2|A0A1S3ATV2_CUCME (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis melo OX=3656 GN=LOC103482778 PE=3 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 3.3e-118
Identity = 214/229 (93.45%), Postives = 220/229 (96.07%), Query Frame = 0


Query: 1   MAQTASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTS 60
           MAQ ASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENG+K+ IEYQFNEDGNKVKITTT+
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKIIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGLDKAAAPEATAAAPGGA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA QGEGLDKA  PEA AAAPGGA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATTPEAAAAAPGGA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDHAILFK 230
           TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPD   LF+
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFR 229

[Close]

BLAST of Carg04734-RA vs. TrEMBL
Match: tr|A0A1S3CGB5|A0A1S3CGB5_CUCME (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis melo OX=3656 GN=LOC103500148 PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 2.7e-112
Identity = 205/229 (89.52%), Postives = 214/229 (93.45%), Query Frame = 0


Query: 1   MAQTASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTS 60
           M Q  + SKLRWGEL+DDDGDLDFLLPPK+IIGPDENGLK+ +EYQFNEDGNKVKITTT+
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGLDKAAAPEATAAAPGGA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA Q +GLDK  APE TAAAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAP-GA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDHAILFK 230
           TKG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPD   LF+
Sbjct: 181 TKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFR 228

[Close]

BLAST of Carg04734-RA vs. TrEMBL
Match: tr|A0A0A0LCF1|A0A0A0LCF1_CUCSA (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus OX=3659 GN=Csa_3G270800 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 3.6e-112
Identity = 204/229 (89.08%), Postives = 214/229 (93.45%), Query Frame = 0


Query: 1   MAQTASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTS 60
           M Q  + SKLRWGEL+DDDGDLDFLLPPK+IIGPDENGLK+ +EYQFNEDGNKVKITTT+
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEGLDKAAAPEATAAAPGGA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA Q +GLDK  APE TAAAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAP-GA 180

Query: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDHAILFK 230
           TKG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPD   LF+
Sbjct: 181 TKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFR 228

[Close]

BLAST of Carg04734-RA vs. TrEMBL
Match: tr|A0A2I4FFZ1|A0A2I4FFZ1_9ROSI (Eukaryotic translation initiation factor 3 subunit G OS=Juglans regia OX=51240 GN=LOC108998481 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 5.9e-99
Identity = 187/228 (82.02%), Postives = 204/228 (89.47%), Query Frame = 0


Query: 4   TASRSKLRWGELDDDDG-DLDFLLPPKKIIGPDENGLKRTIEYQFNEDGNKVKITTTSRT 63
           +A ++KLRWGEL++DDG DLDFLLPP+++IGPDENG+K+ IEY+FN+DGNKVKITTTSRT
Sbjct: 3   SAQQTKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKKVIEYRFNDDGNKVKITTTSRT 62

Query: 64  RKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAG 123
           RKLA+ARLSK AIERRSW KFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPK  G
Sbjct: 63  RKLANARLSKRAIERRSWPKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKAGG 122

Query: 124 DPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALQGEG-LDKAAAPEATAAAPGGAT 183
           D LAQL KGGAVLMVCRTCGKKGDHWTSRCPYKDLA   EG +DK A  EAT AA  GAT
Sbjct: 123 DSLAQLSKGGAVLMVCRTCGKKGDHWTSRCPYKDLAQPAEGFVDKPAVSEATTAA-AGAT 182

Query: 184 KGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDHAILFK 230
           KGTYVPP  RAGA+RTG+DMRRRNDENSVRVTNLSEDTREPD   LF+
Sbjct: 183 KGTYVPPSQRAGAERTGSDMRRRNDENSVRVTNLSEDTREPDLLELFR 229

The following BLAST results are available for this feature:

BLAST of Carg04734-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924193.1	1.4e-123	98.25	eukaryotic translation initiation factor 3 subunit G-like [Cucurbita moschata] >...	[more]
XP_004137389.1	1.3e-118	93.89	PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sa...	[more]
XP_008437366.1	5.1e-118	93.45	PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis me...	[more]
XP_022137509.1	1.1e-117	94.32	eukaryotic translation initiation factor 3 subunit G-like [Momordica charantia]	[more]
XP_022143427.1	2.9e-113	89.96	eukaryotic translation initiation factor 3 subunit G-like [Momordica charantia]	[more]

BLAST of Carg04734-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT3G11400.2	1.3e-78	63.10	eukaryotic translation initiation factor 3G1	[more]
AT5G06000.1	9.6e-71	61.43	eukaryotic translation initiation factor 3G2	[more]

BLAST of Carg04734-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6DRC4\|EIF3G_DANRE	2.9e-24	34.60	Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio OX=7955 GN=e...	[more]
sp\|A7SKE9\|EIF3G_NEMVE	5.5e-23	34.29	Eukaryotic translation initiation factor 3 subunit G OS=Nematostella vectensis O...	[more]
sp\|Q28CY2\|EIF3G_XENTR	2.7e-22	33.99	Eukaryotic translation initiation factor 3 subunit G OS=Xenopus tropicalis OX=83...	[more]
sp\|Q6DJI8\|EI3GA_XENLA	1.3e-21	35.16	Eukaryotic translation initiation factor 3 subunit G-A OS=Xenopus laevis OX=8355...	[more]
sp\|B3MYX2\|EI3G1_DROAN	1.8e-21	34.86	Eukaryotic translation initiation factor 3 subunit G-1 OS=Drosophila ananassae O...	[more]

BLAST of Carg04734-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LPX8\|A0A0A0LPX8_CUCSA	8.8e-119	93.89	Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus OX=3659 ...	[more]
tr\|A0A1S3ATV2\|A0A1S3ATV2_CUCME	3.3e-118	93.45	Eukaryotic translation initiation factor 3 subunit G OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A1S3CGB5\|A0A1S3CGB5_CUCME	2.7e-112	89.52	Eukaryotic translation initiation factor 3 subunit G OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A0A0LCF1\|A0A0A0LCF1_CUCSA	3.6e-112	89.08	Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus OX=3659 ...	[more]
tr\|A0A2I4FFZ1\|A0A2I4FFZ1_9ROSI	5.9e-99	82.02	Eukaryotic translation initiation factor 3 subunit G OS=Juglans regia OX=51240 G...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR024675	eIF3g_N

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg04734	Carg04734	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04734-RA.exon.1	Carg04734-RA.exon.1	exon
Carg04734-RA.exon.2	Carg04734-RA.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04734-RA.five_prime_UTR.1	Carg04734-RA.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04734-RA.CDS.1	Carg04734-RA.CDS.1	CDS
Carg04734-RA.CDS.2	Carg04734-RA.CDS.2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg04734-RA	Carg04734-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024675	Eukaryotic translation initiation factor 3 subunit G, N-terminal	PFAM	PF12353	eIF3g	coord: 31..157 e-value: 2.8E-33 score: 114.9
IPR024675	Eukaryotic translation initiation factor 3 subunit G, N-terminal	CDD	cd12933	eIF3G	coord: 37..156 e-value: 4.67602E-36 score: 124.319
None	No IPR available	PIRSF	PIRSF037949	Transl_init_eIF-3_RNA-bind	coord: 1..231 e-value: 2.0E-50 score: 169.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..208
None	No IPR available	PANTHER	PTHR10352	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G	coord: 4..229
None	No IPR available	PANTHER	PTHR10352:SF6	SUBFAMILY NOT NAMED	coord: 4..229