Carg04645-RA (mRNA) Silver-seed gourd

NameCarg04645-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionethylene-responsive transcription factor 3-like
LocationCucurbita_argyrosperma_scaffold_028 : 207666 .. 208307 (+)
Sequence length642
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCGAGGCAGAGCCACAGATCCATTGGCGGTGGCGCAAACAGTTCATGAACCAGTTAAGGAAGTCCGATTTAGAGGTGTTCGGAAGCGTCCATGGGGCCGATACGCCGCCGAGATTAGAGATCCCTGGAAGAAGACACGCGTTTGGCTCGGCACCTTCGATACGGCGGAGGATGCTGCTAGAGCTTACGACGCCGCTGCTTTCTCTCTCCGCGGGCCGAAGGCGAAAACGAACTTTCCGTTGCATCCGTCGGCGATCTCTGTTCATCAGCAAATTCATTTCTCGCAGGAGCCTCATGATTCCCGCGGATTCTGCAAGATTAGCAAGTCTCCTGTCAAAAGACCTACATCGAGTAGCCTGAGTTCCACCGTGGAGTCTTTTAGCGGACCGCGGGTTTCGATTCCGGCTACATCGGTTCCGAAGCTCCGCCGGAAGTCCCTGCCTCCGGTCTCGCCCGACGATTGCCACAGCGACTGCGATTCGTCGTCTTCCGTTGTTGAGGACAGTGAGGAATATGCTCAGACGCCGTCAATTCACAAGGTGTTGCCGTTCGATCTGAATCTACCTCCTCCACTGCAGTCACTGCAGGACATCGATATATCCGGTGATGATCTTCAAGTTACTACTCTATGTTTCTGA

mRNA sequence

ATGAGGCGAGGCAGAGCCACAGATCCATTGGCGGTGGCGCAAACAGTTCATGAACCAGTTAAGGAAGTCCGATTTAGAGGTGTTCGGAAGCGTCCATGGGGCCGATACGCCGCCGAGATTAGAGATCCCTGGAAGAAGACACGCGTTTGGCTCGGCACCTTCGATACGGCGGAGGATGCTGCTAGAGCTTACGACGCCGCTGCTTTCTCTCTCCGCGGGCCGAAGGCGAAAACGAACTTTCCGTTGCATCCGTCGGCGATCTCTGTTCATCAGCAAATTCATTTCTCGCAGGAGCCTCATGATTCCCGCGGATTCTGCAAGATTAGCAAGTCTCCTGTCAAAAGACCTACATCGAGTAGCCTGAGTTCCACCGTGGAGTCTTTTAGCGGACCGCGGGTTTCGATTCCGGCTACATCGGTTCCGAAGCTCCGCCGGAAGTCCCTGCCTCCGGTCTCGCCCGACGATTGCCACAGCGACTGCGATTCGTCGTCTTCCGTTGTTGAGGACAGTGAGGAATATGCTCAGACGCCGTCAATTCACAAGGTGTTGCCGTTCGATCTGAATCTACCTCCTCCACTGCAGTCACTGCAGGACATCGATATATCCGGTGATGATCTTCAAGTTACTACTCTATGTTTCTGA

Coding sequence (CDS)

ATGAGGCGAGGCAGAGCCACAGATCCATTGGCGGTGGCGCAAACAGTTCATGAACCAGTTAAGGAAGTCCGATTTAGAGGTGTTCGGAAGCGTCCATGGGGCCGATACGCCGCCGAGATTAGAGATCCCTGGAAGAAGACACGCGTTTGGCTCGGCACCTTCGATACGGCGGAGGATGCTGCTAGAGCTTACGACGCCGCTGCTTTCTCTCTCCGCGGGCCGAAGGCGAAAACGAACTTTCCGTTGCATCCGTCGGCGATCTCTGTTCATCAGCAAATTCATTTCTCGCAGGAGCCTCATGATTCCCGCGGATTCTGCAAGATTAGCAAGTCTCCTGTCAAAAGACCTACATCGAGTAGCCTGAGTTCCACCGTGGAGTCTTTTAGCGGACCGCGGGTTTCGATTCCGGCTACATCGGTTCCGAAGCTCCGCCGGAAGTCCCTGCCTCCGGTCTCGCCCGACGATTGCCACAGCGACTGCGATTCGTCGTCTTCCGTTGTTGAGGACAGTGAGGAATATGCTCAGACGCCGTCAATTCACAAGGTGTTGCCGTTCGATCTGAATCTACCTCCTCCACTGCAGTCACTGCAGGACATCGATATATCCGGTGATGATCTTCAAGTTACTACTCTATGTTTCTGA

Protein sequence

MRRGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF
BLAST of Carg04645-RA vs. NCBI nr
Match: XP_022930878.1 (ethylene-responsive transcription factor 3-like [Cucurbita moschata])

HSP 1 Score: 427.9 bits (1099), Expect = 2.0e-116
Identity = 212/213 (99.53%), Postives = 213/213 (100.00%), Query Frame = 0

Query: 1   MRRGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MR+GRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRQGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSS 120
           ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSS
Sbjct: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSS 120

Query: 121 LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH 180
           LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH
Sbjct: 121 LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH 180

Query: 181 KVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 214
           KVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF
Sbjct: 181 KVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 213

BLAST of Carg04645-RA vs. NCBI nr
Match: XP_022989255.1 (ethylene-responsive transcription factor 3-like [Cucurbita maxima])

HSP 1 Score: 425.2 bits (1092), Expect = 1.3e-115
Identity = 211/213 (99.06%), Postives = 211/213 (99.06%), Query Frame = 0

Query: 1   MRRGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSS 120
           ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKIS SPVKRPTSSS
Sbjct: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISNSPVKRPTSSS 120

Query: 121 LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH 180
           LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH
Sbjct: 121 LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH 180

Query: 181 KVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 214
           KVLPFDLNLPPPL SLQDIDISGDDLQVTTLCF
Sbjct: 181 KVLPFDLNLPPPLPSLQDIDISGDDLQVTTLCF 213

BLAST of Carg04645-RA vs. NCBI nr
Match: XP_023529255.1 (ethylene-responsive transcription factor 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.9 bits (1091), Expect = 1.7e-115
Identity = 211/213 (99.06%), Postives = 211/213 (99.06%), Query Frame = 0

Query: 1   MRRGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGRATDPLAVAQTVH PVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRATDPLAVAQTVHGPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSS 120
           ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKIS SPVKRPTSSS
Sbjct: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISNSPVKRPTSSS 120

Query: 121 LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH 180
           LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH
Sbjct: 121 LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH 180

Query: 181 KVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 214
           KVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF
Sbjct: 181 KVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 213

BLAST of Carg04645-RA vs. NCBI nr
Match: XP_023511720.1 (ethylene-responsive transcription factor 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353.2 bits (905), Expect = 6.1e-94
Identity = 177/213 (83.10%), Postives = 185/213 (86.85%), Query Frame = 0

Query: 1   MRRGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGR  DPL  A+TV EP KEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSS 120
           ARAYD AA SLRGPKAKTNFPLHPS ISVHQ+I FSQE HDS G CKIS  PV RPTSSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS 120

Query: 121 LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH 180
           LSSTVESFSGPRVSIPA SVPK+ R+SLP VSPDDCHSDCDSSSSVV+DSEEYA T SI 
Sbjct: 121 LSSTVESFSGPRVSIPAPSVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180

Query: 181 KVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 214
           +VLPFDLNLPPPL  L D+D+SGDDL  T LCF
Sbjct: 181 RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 213

BLAST of Carg04645-RA vs. NCBI nr
Match: XP_008449487.1 (PREDICTED: ethylene-responsive transcription factor 3-like [Cucumis melo])

HSP 1 Score: 351.7 bits (901), Expect = 1.8e-93
Identity = 176/214 (82.24%), Postives = 187/214 (87.38%), Query Frame = 0

Query: 1   MRRGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGRATDPL   ++V EPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRATDPLTAPESVQEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISK-SPVKRPTSS 120
           ARAYD AA SLRGPKAKTNFPLHPS ISVHQQI FSQ+ HDS GFC+IS   PV RPTSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQQIPFSQQFHDSGGFCEISNIIPVNRPTSS 120

Query: 121 SLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSI 180
           SLSSTVESFSGPR+SIP  SVPKLRRKS P V+PDDCHSDCDSSSSVV+DSEEYAQ+ SI
Sbjct: 121 SLSSTVESFSGPRLSIPVPSVPKLRRKSQPQVAPDDCHSDCDSSSSVVDDSEEYAQSSSI 180

Query: 181 HKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 214
            +VLPFDLNLPPPL    D+D+SGDDL  T LCF
Sbjct: 181 RRVLPFDLNLPPPLPPPHDVDLSGDDLHATALCF 214

BLAST of Carg04645-RA vs. TAIR10
Match: AT1G50640.1 (ethylene responsive element binding factor 3)

HSP 1 Score: 172.2 bits (435), Expect = 3.5e-43
Identity = 111/228 (48.68%), Postives = 131/228 (57.46%), Query Frame = 0

Query: 1   MRRGRATDPLA---VAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTA 60
           MRRGR +  +A   V   ++  VKE+RFRGVRKRPWGR+AAEIRDPWKK RVWLGTFD+A
Sbjct: 1   MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61  EDAARAYDAAAFSLRGPKAKTNFPLHPSA--------ISVHQQIHFSQEPH-DSRGFCKI 120
           E+AARAYD+AA +LRGPKAKTNFP+  S+          +  Q     +P  D R F   
Sbjct: 61  EEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDH 120

Query: 121 SKS--PVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRK--SLPPVSPDDCHSDCD-SS 180
            +    V RPTSSS+SSTVESFSGPR   P T  P   ++    PPV P+DCHSDCD   
Sbjct: 121 QQQFPIVNRPTSSSMSSTVESFSGPR---PTTMKPATTKRYPRTPPVVPEDCHSDCDXXX 180

Query: 181 SSVVEDSEEYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTL 212
                                FDLN PP      D+    DDL  T L
Sbjct: 181 XXXXXXXXXXXXXXXXXXXFQFDLNFPP--LDCVDLFNGADDLHCTDL 223

BLAST of Carg04645-RA vs. TAIR10
Match: AT3G20310.1 (ethylene response factor 7)

HSP 1 Score: 126.3 bits (316), Expect = 2.2e-29
Identity = 97/246 (39.43%), Postives = 118/246 (47.97%), Query Frame = 0

Query: 1   MRRGRATDPL--AVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAE 60
           MR+GR +  +  A+  T    VKE R+RGVRKRPWGR+AAEIRDP KK+RVWLGTFD+A 
Sbjct: 1   MRKGRGSSVVGPALPVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAV 60

Query: 61  DAARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPH---------------DSR 120
           DAARAYD AA +LRGPKAKTNFP+  S  S  Q + +    +               D R
Sbjct: 61  DAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPFMDHR 120

Query: 121 GF------CKISKSPVKRPTSSSLSSTVESFSGPR---VSIPATSVPK-----LRRKSLP 180
            +                             SGPR    +  ++SV K      R    P
Sbjct: 121 LYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPRPMEAAXXSSSVAKPLHAIKRYPRTP 180

Query: 181 PVSPDDCHSDCDSSSSVVEDSEEYAQTPSIHKV-LPFDLNLPPPLQSLQDIDISG---DD 212
           PV+P+DCHSDCDS                  K    FDLN PP    L  +D+     DD
Sbjct: 181 PVAPEDCHSDCDSXXXXXXXXXXXXXXXXXXKTPFQFDLNFPP----LDGVDLFAGGIDD 240

BLAST of Carg04645-RA vs. TAIR10
Match: AT3G15210.1 (ethylene responsive element binding factor 4)

HSP 1 Score: 121.3 bits (303), Expect = 7.1e-28
Identity = 89/219 (40.64%), Postives = 106/219 (48.40%), Query Frame = 0

Query: 2   RRGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAA 61
           + G   DP    QT H   KE+R+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDTAE+AA
Sbjct: 3   KMGLKPDPATTNQT-HNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAA 62

Query: 62  RAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRP--TSS 121
           RAYD AA   RG KAKTNFP             F++ P  S      S   +  P  T+ 
Sbjct: 63  RAYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATAG 122

Query: 122 SLSSTVESFSGPRVSIPATSVPKLR--------------RKSLPPVSPD----------- 181
           ++   +E   G         +P  R              R   PPV+             
Sbjct: 123 NVPPQLELSLGGXXXXSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATK 182

Query: 182 -DCHSDCDSSSSVVEDSEEYAQTPSIHKVLPFDLNLPPP 193
             C +  DS SS V D E   +  S  ++L  DLNLPPP
Sbjct: 183 MACGAQSDSDSSSVVDFEGGMEKRS--QLLDLDLNLPPP 218

BLAST of Carg04645-RA vs. TAIR10
Match: AT5G44210.1 (erf domain protein 9)

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0

Query: 21 KEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDAAAFSLRGPKAKTNF 80
          KEV FRGVRKRPWGRYAAEIRDP KKTRVWLGTFDTAE+AARAYD AA   RG KAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 81 PLHPSAISVH 91
          PL   + +V+
Sbjct: 89 PLPGESTTVN 98

BLAST of Carg04645-RA vs. TAIR10
Match: AT1G28370.1 (ERF domain protein 11)

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-25
Identity = 82/176 (46.59%), Postives = 97/176 (55.11%), Query Frame = 0

Query: 23  VRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDAAAFSLRGPKAKTNFPL 82
           VR+RGVRKRPWGRYAAEIRDP+KK+RVWLGTFDT E+AARAYD  A   RG KAKTNFP 
Sbjct: 18  VRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPC 77

Query: 83  HPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSSLSSTVESFSGPRVSIPATSV-- 142
           +                        I+   +    S S SSTVES S P +++ + SV  
Sbjct: 78  Y-----------------------NINAHCLSLTQSLSQSSTVES-SFPNLNLGSDSVSS 137

Query: 143 ----PKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIHKVLPFDLNLPPP 193
               PK++ K+   V  +   SD   SSSVV D   Y        VL  DLN PPP
Sbjct: 138 RFPFPKIQVKAGMMVFDERSESD---SSSVVMDVVRY---EGRRVVLDLDLNFPPP 163

BLAST of Carg04645-RA vs. Swiss-Prot
Match: sp|Q9SXS8|ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 9.7e-51
Identity = 126/234 (53.85%), Postives = 142/234 (60.68%), Query Frame = 0

Query: 1   MRRGRATDPLAVAQTVHEP-----VKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFD 60
           MRRGRA    A A    EP      KE+RFRGVRKRPWGR+AAEIRDPWKKTRVWLGTFD
Sbjct: 1   MRRGRAA--AAPAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFD 60

Query: 61  TAEDAARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPH-----DSRGFCKISK 120
           +AEDAARAYDAAA +LRGPKAKTNFPL     + H Q +    P+     DSR + + + 
Sbjct: 61  SAEDAARAYDAAARALRGPKAKTNFPL---PYAHHHQFNQGHNPNNDPFVDSRFYPQDNP 120

Query: 121 SPVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSL---PPVSPDDCHSDCDSSSSVV 180
              +RPTSSS+SSTVESFSGPR                   PPV PDDCHSDCDSSSSVV
Sbjct: 121 IISQRPTSSSMSSTVESFSGPRPXXXXXXXXXXXXXXYTRSPPVVPDDCHSDCDSSSSVV 180

Query: 181 EDSE---------EYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLC 213
           +  +             + S  K L FDLNLPPP+      D   DDL  T LC
Sbjct: 181 DHGDCEXXXXXXXXXXASSSFRKPLLFDLNLPPPMD-----DAGADDLHCTALC 224

BLAST of Carg04645-RA vs. Swiss-Prot
Match: sp|O80339|ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ERF3 PE=1 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 6.3e-42
Identity = 111/228 (48.68%), Postives = 131/228 (57.46%), Query Frame = 0

Query: 1   MRRGRATDPLA---VAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTA 60
           MRRGR +  +A   V   ++  VKE+RFRGVRKRPWGR+AAEIRDPWKK RVWLGTFD+A
Sbjct: 1   MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61  EDAARAYDAAAFSLRGPKAKTNFPLHPSA--------ISVHQQIHFSQEPH-DSRGFCKI 120
           E+AARAYD+AA +LRGPKAKTNFP+  S+          +  Q     +P  D R F   
Sbjct: 61  EEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDH 120

Query: 121 SKS--PVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRK--SLPPVSPDDCHSDCD-SS 180
            +    V RPTSSS+SSTVESFSGPR   P T  P   ++    PPV P+DCHSDCD   
Sbjct: 121 QQQFPIVNRPTSSSMSSTVESFSGPR---PTTMKPATTKRYPRTPPVVPEDCHSDCDXXX 180

Query: 181 SSVVEDSEEYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTL 212
                                FDLN PP      D+    DDL  T L
Sbjct: 181 XXXXXXXXXXXXXXXXXXXFQFDLNFPP--LDCVDLFNGADDLHCTDL 223

BLAST of Carg04645-RA vs. Swiss-Prot
Match: sp|Q9LDE4|ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=ERF7 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.0e-28
Identity = 97/246 (39.43%), Postives = 118/246 (47.97%), Query Frame = 0

Query: 1   MRRGRATDPL--AVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAE 60
           MR+GR +  +  A+  T    VKE R+RGVRKRPWGR+AAEIRDP KK+RVWLGTFD+A 
Sbjct: 1   MRKGRGSSVVGPALPVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAV 60

Query: 61  DAARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPH---------------DSR 120
           DAARAYD AA +LRGPKAKTNFP+  S  S  Q + +    +               D R
Sbjct: 61  DAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPFMDHR 120

Query: 121 GF------CKISKSPVKRPTSSSLSSTVESFSGPR---VSIPATSVPK-----LRRKSLP 180
            +                             SGPR    +  ++SV K      R    P
Sbjct: 121 LYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPRPMEAAXXSSSVAKPLHAIKRYPRTP 180

Query: 181 PVSPDDCHSDCDSSSSVVEDSEEYAQTPSIHKV-LPFDLNLPPPLQSLQDIDISG---DD 212
           PV+P+DCHSDCDS                  K    FDLN PP    L  +D+     DD
Sbjct: 181 PVAPEDCHSDCDSXXXXXXXXXXXXXXXXXXKTPFQFDLNFPP----LDGVDLFAGGIDD 240

BLAST of Carg04645-RA vs. Swiss-Prot
Match: sp|O80340|ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26
Identity = 89/219 (40.64%), Postives = 106/219 (48.40%), Query Frame = 0

Query: 2   RRGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAA 61
           + G   DP    QT H   KE+R+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDTAE+AA
Sbjct: 3   KMGLKPDPATTNQT-HNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAA 62

Query: 62  RAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRP--TSS 121
           RAYD AA   RG KAKTNFP             F++ P  S      S   +  P  T+ 
Sbjct: 63  RAYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATAG 122

Query: 122 SLSSTVESFSGPRVSIPATSVPKLR--------------RKSLPPVSPD----------- 181
           ++   +E   G         +P  R              R   PPV+             
Sbjct: 123 NVPPQLELSLGGXXXXSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATK 182

Query: 182 -DCHSDCDSSSSVVEDSEEYAQTPSIHKVLPFDLNLPPP 193
             C +  DS SS V D E   +  S  ++L  DLNLPPP
Sbjct: 183 MACGAQSDSDSSSVVDFEGGMEKRS--QLLDLDLNLPPP 218

BLAST of Carg04645-RA vs. Swiss-Prot
Match: sp|Q9LW49|ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.6e-24
Identity = 53/63 (84.13%), Postives = 57/63 (90.48%), Query Frame = 0

Query: 20 VKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDAAAFSLRGPKAKTN 79
          VKEV +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAE+AA+AYD AA   RGPKAKTN
Sbjct: 22 VKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTN 81

Query: 80 FPL 83
          FPL
Sbjct: 82 FPL 84

BLAST of Carg04645-RA vs. TrEMBL
Match: tr|A0A1S3BLI0|A0A1S3BLI0_CUCME (ethylene-responsive transcription factor 3-like OS=Cucumis melo OX=3656 GN=LOC103491361 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.2e-93
Identity = 176/214 (82.24%), Postives = 187/214 (87.38%), Query Frame = 0

Query: 1   MRRGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGRATDPL   ++V EPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRATDPLTAPESVQEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISK-SPVKRPTSS 120
           ARAYD AA SLRGPKAKTNFPLHPS ISVHQQI FSQ+ HDS GFC+IS   PV RPTSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQQIPFSQQFHDSGGFCEISNIIPVNRPTSS 120

Query: 121 SLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSI 180
           SLSSTVESFSGPR+SIP  SVPKLRRKS P V+PDDCHSDCDSSSSVV+DSEEYAQ+ SI
Sbjct: 121 SLSSTVESFSGPRLSIPVPSVPKLRRKSQPQVAPDDCHSDCDSSSSVVDDSEEYAQSSSI 180

Query: 181 HKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 214
            +VLPFDLNLPPPL    D+D+SGDDL  T LCF
Sbjct: 181 RRVLPFDLNLPPPLPPPHDVDLSGDDLHATALCF 214

BLAST of Carg04645-RA vs. TrEMBL
Match: tr|A0A0A0KHW7|A0A0A0KHW7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421660 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 5.9e-93
Identity = 176/214 (82.24%), Postives = 188/214 (87.85%), Query Frame = 0

Query: 1   MRRGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRRGRATDPL V ++V +PVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRATDPLTVPESVQKPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISK-SPVKRPTSS 120
           ARAYD AA SLRGPKAKTNFPLHPS ISVHQQI FSQ+ HDS GFC+IS   PV RPTSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQQIPFSQQFHDSGGFCEISNIIPVNRPTSS 120

Query: 121 SLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSI 180
           SLSSTVESFSGPR+SIPA SVPKLRRKSLP V+PDDCHSDCDSSSSVV+DSEEYA + SI
Sbjct: 121 SLSSTVESFSGPRLSIPAPSVPKLRRKSLPQVAPDDCHSDCDSSSSVVDDSEEYAHSSSI 180

Query: 181 HKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 214
            +VLPFDLNLPPPL    D+D+SGDDL  T L F
Sbjct: 181 RRVLPFDLNLPPPLPPPHDVDLSGDDLHATALYF 214

BLAST of Carg04645-RA vs. TrEMBL
Match: tr|A0A1S3C351|A0A1S3C351_CUCME (ethylene-responsive transcription factor 3-like OS=Cucumis melo OX=3656 GN=LOC103496350 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.6e-69
Identity = 143/222 (64.41%), Postives = 166/222 (74.77%), Query Frame = 0

Query: 1   MRRGRATDPLAVAQTVH------EPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGR +DP    +  +       P+KE+R+RGVRKRPWGRYAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRPSDPFTATEIPNSTIQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60

Query: 61  DTAEDAARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEP---HDSRGF-CKISK 120
           D+AE+AARAYD AA +LRG KAKTNFPLHPS IS+ QQI F Q P   HDS GF  KI  
Sbjct: 61  DSAEEAARAYDNAARTLRGAKAKTNFPLHPSTISIQQQIPFYQSPPDLHDSNGFGAKIEC 120

Query: 121 SPVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDS 180
               RPTSSSLSSTVESFSGPR+S P +S+  +RR+ + PVSPDDCHSDCDSSSSVV+D 
Sbjct: 121 VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDD- 180

Query: 181 EEYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLC 213
           +E     S  + LPFDLNLPPP+     +D++GDDLQ T LC
Sbjct: 181 DEVCVLASFRRALPFDLNLPPPMDV---VDLTGDDLQATALC 218

BLAST of Carg04645-RA vs. TrEMBL
Match: tr|A0A0A0KBH0|A0A0A0KBH0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G167230 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.6e-69
Identity = 143/222 (64.41%), Postives = 166/222 (74.77%), Query Frame = 0

Query: 1   MRRGRATDPLAVAQTVH------EPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGR +DP    +  +       P+KE+R+RGVRKRPWGRYAAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRPSDPFTATEIPNSTIQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60

Query: 61  DTAEDAARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEP---HDSRGF-CKISK 120
           D+AE+AARAYD AA +LRG KAKTNFPLHPS IS+ QQI F Q P   HDS GF  KI  
Sbjct: 61  DSAEEAARAYDNAARTLRGAKAKTNFPLHPSTISIQQQIPFYQSPPDLHDSNGFGAKIEC 120

Query: 121 SPVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDS 180
               RPTSSSLSSTVESFSGPR+S P +S+  +RR+ + PVSPDDCHSDCDSSSSVV+D 
Sbjct: 121 VQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDD- 180

Query: 181 EEYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLC 213
           +E     S  + LPFDLNLPPP+     +D++GDDLQ T LC
Sbjct: 181 DEVCVLASFRRALPFDLNLPPPMDV---VDLTGDDLQATALC 218

BLAST of Carg04645-RA vs. TrEMBL
Match: tr|A0A2N9ESW2|A0A2N9ESW2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5827 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.1e-54
Identity = 135/224 (60.27%), Postives = 154/224 (68.75%), Query Frame = 0

Query: 1   MRRGRAT-DPLAVAQTVHEP-----VKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTF 60
           MRRGRAT DP A  +T  E         +++RGVRKRPWGR+AAEIRDPWKKTRVWLGTF
Sbjct: 1   MRRGRATADPTAPNKTSCEGHDQQIKNNIKYRGVRKRPWGRFAAEIRDPWKKTRVWLGTF 60

Query: 61  DTAEDAARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPH-DSRGFCKISKSPV 120
           D+AEDAARAYD AA SLRGPKAK NFPL    ++    +    EP   S G  K +    
Sbjct: 61  DSAEDAARAYDTAALSLRGPKAKINFPLTAPQLAT-LPVPVRDEPRFSSPGSGKFNPIQP 120

Query: 121 KRPTSSSLSSTVESFSGPR-VSIPATSVPKLRRKSLPPV---SPDDCHSDCDSSSSVVED 180
            RPT+SS+SSTVESFSGPR VS P T V     K LPPV   +PDDC SDCDSSSSVV+D
Sbjct: 121 NRPTTSSMSSTVESFSGPRLVSNPVTKV-----KLLPPVNPAAPDDCRSDCDSSSSVVDD 180

Query: 181 SEEY-AQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLC 213
           +++Y   T S  KVLPFDLNLPPP+   +D  I GDDLQ T LC
Sbjct: 181 NDDYCVLTSSFRKVLPFDLNLPPPIDG-EDFGI-GDDLQATALC 216

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022930878.12.0e-11699.53ethylene-responsive transcription factor 3-like [Cucurbita moschata][more]
XP_022989255.11.3e-11599.06ethylene-responsive transcription factor 3-like [Cucurbita maxima][more]
XP_023529255.11.7e-11599.06ethylene-responsive transcription factor 3-like [Cucurbita pepo subsp. pepo][more]
XP_023511720.16.1e-9483.10ethylene-responsive transcription factor 3-like [Cucurbita pepo subsp. pepo][more]
XP_008449487.11.8e-9382.24PREDICTED: ethylene-responsive transcription factor 3-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT1G50640.13.5e-4348.68ethylene responsive element binding factor 3[more]
AT3G20310.12.2e-2939.43ethylene response factor 7[more]
AT3G15210.17.1e-2840.64ethylene responsive element binding factor 4[more]
AT5G44210.11.1e-2578.57erf domain protein 9[more]
AT1G28370.11.5e-2546.59ERF domain protein 11[more]
Match NameE-valueIdentityDescription
sp|Q9SXS8|ERF3_TOBAC9.7e-5153.85Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ... [more]
sp|O80339|ERF82_ARATH6.3e-4248.68Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
sp|Q9LDE4|ERF83_ARATH4.0e-2839.43Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
sp|O80340|ERF78_ARATH1.3e-2640.64Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
sp|Q9LW49|ERF4_NICSY1.6e-2484.13Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3BLI0|A0A1S3BLI0_CUCME1.2e-9382.24ethylene-responsive transcription factor 3-like OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0KHW7|A0A0A0KHW7_CUCSA5.9e-9382.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421660 PE=4 SV=1[more]
tr|A0A1S3C351|A0A1S3C351_CUCME2.6e-6964.41ethylene-responsive transcription factor 3-like OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0KBH0|A0A0A0KBH0_CUCSA2.6e-6964.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G167230 PE=4 SV=1[more]
tr|A0A2N9ESW2|A0A2N9ESW2_FAGSY4.1e-5460.27Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5827 PE=4 SV=1[more]
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg04645Carg04645gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg04645-RA.exon.1Carg04645-RA.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg04645-RA.CDS.1Carg04645-RA.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg04645-RACarg04645-RA-proteinpolypeptide


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 25..36
score: 60.91
coord: 47..63
score: 73.9
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 24..87
e-value: 1.1E-37
score: 141.2
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 24..73
e-value: 2.0E-13
score: 50.2
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 24..81
score: 23.828
IPR001471AP2/ERF domainCDDcd00018AP2coord: 24..81
e-value: 7.83563E-20
score: 79.2379
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 23..83
e-value: 9.3E-32
score: 110.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..134
NoneNo IPR availablePANTHERPTHR31677:SF17ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10-RELATEDcoord: 19..196
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 19..196
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 25..82