Carg04384-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04384-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ribosomal protein
Location	Cucurbita_argyrosperma_scaffold_032 : 121473 .. 124031 (+)
Sequence length	1560

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTTTCTGGAAATTTTAATGATCTTCCTGTTCTTCTTTTGAAACCCCTTTTGATCTTGTTCTGTGCTCTGTTTCTGCTCCTACTCTGTTTCTTCAAATACTATAATAAACAACCTCTGTTTCAACAACATGTTGATTGTGATGGAATTGAAGAAACGCCATTTTCATCTCTAAGCTTTAAGTTTCCAACGTACGAGGATTTTCTGAGAACTACTACACAGAATGTTGACCCACCTGTATATGAAACTTCAAATGAGAACGATTTTGATGACTCGAGTTCTTCAACTTCTGACACGGATTTAGATCTTTGTCCCCGAGAAGACCCAGAAAATTTTCTCCCAAATGGGTTGCGGGGCAGCAATGATGTCAGAATCCAAGATGATAATGAATTTGATGAACCTGTGGAAGCCATATCCGGGAGTTTTGATGAGGACTTCATAGAAGAACTGAAAAATGAGATTAAGAAGGCGAAAGCCAAAGCGAAATCCGAATCTCGGTTGCCCTCAATTCCTGAAGAATCGGAGTACCCAATAGCCATGGAAGAAGATTCAAAACGACGGAAGAAAGAAGAAAGATCAAATCGCAAAGGCATAAGAAAAGAACTCCACGAATTCCACAAGCAATACACAGAAAAGATGCGAAAATACGACACTTTAAATCACCAAATCGCAAAAGGTCAGTTCATTCATTCATTCAATCAATTTTTGTTTGTTTCATAAACCCCGCATGGATTTTGGTTTGCAGAGTGGAAAATGAAGCAATCGAAGGGGTTAGTGGAGTCTGTTTCATCGAAAGGGCTGTGTGGGTGCAGGCCTGATAAGAAAGGCGAAGCAAAAACAGGGGAAAACAGAGGAATCGATGGGGAATTGGAGGTGGTTTATGTGGTGCAAATGTGGGTTTCATGGGAGTTTATAGTGTGGCAGTACAAGAAAGCTTTGGAGATTAGCGGCGGAGAAGGGTATGGAAGTTACAGATTCAATGAAGTTGCAGAGAAATTTGAGCATTTTAAAGTGTTGATACAGAGATTTATGGAGAATGAATGGTCGGAGGAAGGGTCGAGAGTTGAATATTATGCTACAAGTCGTGTTGGTAGGAGAAAGCTTCTGCAAGTTCCTCTGCTCAAAGGTGAGTCAAATGTTTTCTCCTCTGCTTTTGCTTCGTTATTTAACCCTACACAAGTTTAGGTTAAATCAAATACTATATATAATATATATTTATATTTAATACATATTTAAACTTTAAAAAGTATCTAAAAAAATATTTTAATTTTTTATTATATATTTTAAACTTTGTCTTATTTATTTCAATTTTTTTAAAAAAATTAATCAACATATTAAACATTACAAAATATATATATATATAATTTATTAAACAAACATTTTTTAAATTAAAAAGCCTATTAAATATAAAATTAAAAGTTTGAAATAGATATTTTTTAAAATTTAGAAATCTATTAAATACTTACTTATAAATTTTATAAACTTTGAGATAGATTAATAAAAATATCATGAAAAAAAAAAAACTTCTAAATTTTTAATAATTTCAGCCATATTTTTAAATTTAAAAAAAATAAAAAAAATAAACGAATAAAAAATGATAATTTTGAATAAAGAGCATTACTACTTCATTTCAAAAATATTTTTAACACTTTTCAAATGTTTCAAAAATGATTTTAATATTGTAAAAATTTTATTAATACCCTTAAATTTGGTAACAACTTCAAAATTACCAAATATATTTTTAAAAGGTTTATTAAAATTTAAGTTTTTTTTTTTGGTAAGATAAAATATAAATTTTAGAAATATTTTATTAATTTATGTTAGATAAATAAGGCTTTACTATTGAGTGGAATGCCATTTTCTTGTAGGATATATTGTTATTTAAATATGCTAATGGAATGAACTATTAGCATAGCATCAAATTAGGAAGAAAATTAAGTAATTGTAAGAATGTGTTTGATTGCAGAAGATGAAGCGAAAGACAATAAGAAGACAGGAAGAAGAGAGGAGGAAGAGGGCGTTAAAATGGATAGGGTTATTGAGATATTGCAGGAATGTATAAGAGTGTTCTGGCAATTCATTCGAGCCGATAAACTTGCCCATATATCATCAACTTCGAAGTCTCATATTATAGAACAACAACAAGAACGTAGCAGCCCTGCATATTCCAACATTCTAAACCAAATTCTGTTAGATCTTCATAAAGTTAGTCACTTACTTCCATTTAATATAAACTCCATACATGCATCCAACGCATTAGATACTCACCTTGTTTGAGAGAGTTGTGTGTTGCAGAAGGACAGAAAATTGAAGAAGATAATACAGAGAAAGACATGGAGATTGAAGAACTGTAAAGATGCCTTTGATGAAGATGACCCAGATGATGAAGCTTACTTCTTGGCTATGGTGGATTTGAAGTTGGTGGGGAGAGTGCTTAATATGCATACCATTTCAATTGACCAATTGAAATGGTGTCGCCATAAATTGAGCTGTATTAATTTTCAAACTGGGAAGATTAGGATACAACCTTCGTCGTTTTTCTCTATATACTCGTGA

mRNA sequence

ATGAAGTTTTCTGGAAATTTTAATGATCTTCCTGTTCTTCTTTTGAAACCCCTTTTGATCTTGTTCTGTGCTCTGTTTCTGCTCCTACTCTGTTTCTTCAAATACTATAATAAACAACCTCTGTTTCAACAACATGTTGATTGTGATGGAATTGAAGAAACGCCATTTTCATCTCTAAGCTTTAAGTTTCCAACGTACGAGGATTTTCTGAGAACTACTACACAGAATGTTGACCCACCTGTATATGAAACTTCAAATGAGAACGATTTTGATGACTCGAGTTCTTCAACTTCTGACACGGATTTAGATCTTTGTCCCCGAGAAGACCCAGAAAATTTTCTCCCAAATGGGTTGCGGGGCAGCAATGATGTCAGAATCCAAGATGATAATGAATTTGATGAACCTGTGGAAGCCATATCCGGGAGTTTTGATGAGGACTTCATAGAAGAACTGAAAAATGAGATTAAGAAGGCGAAAGCCAAAGCGAAATCCGAATCTCGGTTGCCCTCAATTCCTGAAGAATCGGAGTACCCAATAGCCATGGAAGAAGATTCAAAACGACGGAAGAAAGAAGAAAGATCAAATCGCAAAGGCATAAGAAAAGAACTCCACGAATTCCACAAGCAATACACAGAAAAGATGCGAAAATACGACACTTTAAATCACCAAATCGCAAAAGAGTGGAAAATGAAGCAATCGAAGGGGTTAGTGGAGTCTGTTTCATCGAAAGGGCTGTGTGGGTGCAGGCCTGATAAGAAAGGCGAAGCAAAAACAGGGGAAAACAGAGGAATCGATGGGGAATTGGAGGTGGTTTATGTGGTGCAAATGTGGGTTTCATGGGAGTTTATAGTGTGGCAGTACAAGAAAGCTTTGGAGATTAGCGGCGGAGAAGGGTATGGAAGTTACAGATTCAATGAAGTTGCAGAGAAATTTGAGCATTTTAAAGTGTTGATACAGAGATTTATGGAGAATGAATGGTCGGAGGAAGGGTCGAGAGTTGAATATTATGCTACAAGTCGTGTTGGTAGGAGAAAGCTTCTGCAAGTTCCTCTGCTCAAAGAAGATGAAGCGAAAGACAATAAGAAGACAGGAAGAAGAGAGGAGGAAGAGGGCGTTAAAATGGATAGGGTTATTGAGATATTGCAGGAATGTATAAGAGTGTTCTGGCAATTCATTCGAGCCGATAAACTTGCCCATATATCATCAACTTCGAAGTCTCATATTATAGAACAACAACAAGAACGTAGCAGCCCTGCATATTCCAACATTCTAAACCAAATTCTGTTAGATCTTCATAAAAAGGACAGAAAATTGAAGAAGATAATACAGAGAAAGACATGGAGATTGAAGAACTGTAAAGATGCCTTTGATGAAGATGACCCAGATGATGAAGCTTACTTCTTGGCTATGGTGGATTTGAAGTTGGTGGGGAGAGTGCTTAATATGCATACCATTTCAATTGACCAATTGAAATGGTGTCGCCATAAATTGAGCTGTATTAATTTTCAAACTGGGAAGATTAGGATACAACCTTCGTCGTTTTTCTCTATATACTCGTGA

Coding sequence (CDS)

ATGAAGTTTTCTGGAAATTTTAATGATCTTCCTGTTCTTCTTTTGAAACCCCTTTTGATCTTGTTCTGTGCTCTGTTTCTGCTCCTACTCTGTTTCTTCAAATACTATAATAAACAACCTCTGTTTCAACAACATGTTGATTGTGATGGAATTGAAGAAACGCCATTTTCATCTCTAAGCTTTAAGTTTCCAACGTACGAGGATTTTCTGAGAACTACTACACAGAATGTTGACCCACCTGTATATGAAACTTCAAATGAGAACGATTTTGATGACTCGAGTTCTTCAACTTCTGACACGGATTTAGATCTTTGTCCCCGAGAAGACCCAGAAAATTTTCTCCCAAATGGGTTGCGGGGCAGCAATGATGTCAGAATCCAAGATGATAATGAATTTGATGAACCTGTGGAAGCCATATCCGGGAGTTTTGATGAGGACTTCATAGAAGAACTGAAAAATGAGATTAAGAAGGCGAAAGCCAAAGCGAAATCCGAATCTCGGTTGCCCTCAATTCCTGAAGAATCGGAGTACCCAATAGCCATGGAAGAAGATTCAAAACGACGGAAGAAAGAAGAAAGATCAAATCGCAAAGGCATAAGAAAAGAACTCCACGAATTCCACAAGCAATACACAGAAAAGATGCGAAAATACGACACTTTAAATCACCAAATCGCAAAAGAGTGGAAAATGAAGCAATCGAAGGGGTTAGTGGAGTCTGTTTCATCGAAAGGGCTGTGTGGGTGCAGGCCTGATAAGAAAGGCGAAGCAAAAACAGGGGAAAACAGAGGAATCGATGGGGAATTGGAGGTGGTTTATGTGGTGCAAATGTGGGTTTCATGGGAGTTTATAGTGTGGCAGTACAAGAAAGCTTTGGAGATTAGCGGCGGAGAAGGGTATGGAAGTTACAGATTCAATGAAGTTGCAGAGAAATTTGAGCATTTTAAAGTGTTGATACAGAGATTTATGGAGAATGAATGGTCGGAGGAAGGGTCGAGAGTTGAATATTATGCTACAAGTCGTGTTGGTAGGAGAAAGCTTCTGCAAGTTCCTCTGCTCAAAGAAGATGAAGCGAAAGACAATAAGAAGACAGGAAGAAGAGAGGAGGAAGAGGGCGTTAAAATGGATAGGGTTATTGAGATATTGCAGGAATGTATAAGAGTGTTCTGGCAATTCATTCGAGCCGATAAACTTGCCCATATATCATCAACTTCGAAGTCTCATATTATAGAACAACAACAAGAACGTAGCAGCCCTGCATATTCCAACATTCTAAACCAAATTCTGTTAGATCTTCATAAAAAGGACAGAAAATTGAAGAAGATAATACAGAGAAAGACATGGAGATTGAAGAACTGTAAAGATGCCTTTGATGAAGATGACCCAGATGATGAAGCTTACTTCTTGGCTATGGTGGATTTGAAGTTGGTGGGGAGAGTGCTTAATATGCATACCATTTCAATTGACCAATTGAAATGGTGTCGCCATAAATTGAGCTGTATTAATTTTCAAACTGGGAAGATTAGGATACAACCTTCGTCGTTTTTCTCTATATACTCGTGA

Protein sequence

MKFSGNFNDLPVLLLKPLLILFCALFLLLLCFFKYYNKQPLFQQHVDCDGIEETPFSSLSFKFPTYEDFLRTTTQNVDPPVYETSNENDFDDSSSSTSDTDLDLCPREDPENFLPNGLRGSNDVRIQDDNEFDEPVEAISGSFDEDFIEELKNEIKKAKAKAKSESRLPSIPEESEYPIAMEEDSKRRKKEERSNRKGIRKELHEFHKQYTEKMRKYDTLNHQIAKEWKMKQSKGLVESVSSKGLCGCRPDKKGEAKTGENRGIDGELEVVYVVQMWVSWEFIVWQYKKALEISGGEGYGSYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRVEYYATSRVGRRKLLQVPLLKEDEAKDNKKTGRREEEEGVKMDRVIEILQECIRVFWQFIRADKLAHISSTSKSHIIEQQQERSSPAYSNILNQILLDLHKKDRKLKKIIQRKTWRLKNCKDAFDEDDPDDEAYFLAMVDLKLVGRVLNMHTISIDQLKWCRHKLSCINFQTGKIRIQPSSFFSIYS

Homology

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BLAST of Carg04384-RA vs. NCBI nr
Match: XP_022959969.1 (uncharacterized protein LOC111460861 [Cucurbita moschata])

HSP 1 Score: 927.2 bits (2395), Expect = 2.5e-266
Identity = 488/519 (94.03%), Postives = 493/519 (94.99%), Query Frame = 0


Query: 1   MKFSGNFNDLPVLLLKPLLILFCALFLLLLCFFKYYNKQPLFQQHVDCDGIEETPFSSLS 60
           MKFSGNFND+ VLLLKPLLILFCALF LLLCFFKYYNKQPLFQQHVDCDGIEETPFSSLS
Sbjct: 1   MKFSGNFNDVLVLLLKPLLILFCALFPLLLCFFKYYNKQPLFQQHVDCDGIEETPFSSLS 60

Query: 61  FKFPTYEDFLRTTTQNVDPPVYETSNEXXXXXXXXXXXXXXXXXCPREDPENFLPNGLRG 120
           FKFPTYEDFLRTTTQNVDPPVYETSNEXXXXXXXXXXXXXXXXXCPREDPE FLPNGLRG
Sbjct: 61  FKFPTYEDFLRTTTQNVDPPVYETSNEXXXXXXXXXXXXXXXXXCPREDPEIFLPNGLRG 120

Query: 121 SNDVRIQDDNEFDEPVEAISGSFDEDFIXXXXXXXXXXXXXXXXXXRLPSIPEESEYPIA 180
           SNDV IQDDNEFDEPVEAISGSFD+DFI                   LPSIPEESEYPIA
Sbjct: 121 SNDVIIQDDNEFDEPVEAISGSFDQDFIEELKNEIKKVKAKAKSESGLPSIPEESEYPIA 180

Query: 181 MEEDSKRRKXXXRSNRKGIRKELHEFHKQYTEKMRKYDTLNHQIAKEWKMKQSKGLVESV 240
           MEEDSKRRK   RSNRKGIRKELHEFHKQYTEKMRKYDTLNHQIAKEWKMKQSKGLVESV
Sbjct: 181 MEEDSKRRKKEERSNRKGIRKELHEFHKQYTEKMRKYDTLNHQIAKEWKMKQSKGLVESV 240

Query: 241 SSKGLCGCRPDKKGEAKTGENRGIDGELEVVYVVQMWVSWEFIVWQYKKALEISGGEGYG 300
           SSKGLCGCRPDKKGEAKTGENRG++GELEVVYVVQMWVSWEFIVWQYKKALEISGGEGYG
Sbjct: 241 SSKGLCGCRPDKKGEAKTGENRGMEGELEVVYVVQMWVSWEFIVWQYKKALEISGGEGYG 300

Query: 301 SYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRVEYYATSRVGRRKLLQVPLLKEDEAKDN 360
           SYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRVEYYATSRVG+RKLLQVPLLKEDEAKDN
Sbjct: 301 SYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRVEYYATSRVGKRKLLQVPLLKEDEAKDN 360

Query: 361 KKTGRREEEEGVKMDRVIEILQECIRVFWQFIRADKLAHISSTSKSHIIEQQQERSSPAY 420
           KKTGRREEEEGVKMDRVIEILQECIRVFWQFIRADKLAHISSTSKSHIIEQQQERSSPAY
Sbjct: 361 KKTGRREEEEGVKMDRVIEILQECIRVFWQFIRADKLAHISSTSKSHIIEQQQERSSPAY 420

Query: 421 SNILNQILLDLHKKDRKLKKIIQRKTWRLKNCKDAFDEDDPDDEAYFLAMVDLKLVGRVL 480
           SNILNQILLDLHKKDRKLKKIIQRKTWRLKNCKDAFDEDDPDDEAYFLAMVDLKLVGRVL
Sbjct: 421 SNILNQILLDLHKKDRKLKKIIQRKTWRLKNCKDAFDEDDPDDEAYFLAMVDLKLVGRVL 480

Query: 481 NMHTISIDQLKWCRHKLSCINFQTGKIRIQPSSFFSIYS 520
           NMHTISIDQLKWCRHKLSCINFQTGKIRIQPSSFFSIYS
Sbjct: 481 NMHTISIDQLKWCRHKLSCINFQTGKIRIQPSSFFSIYS 519

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BLAST of Carg04384-RA vs. NCBI nr
Match: XP_023544885.1 (uncharacterized protein LOC111804322 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 878.6 bits (2269), Expect = 1.0e-251
Identity = 468/520 (90.00%), Postives = 479/520 (92.12%), Query Frame = 0


Query: 1   MKFSGNFNDLPVLLLKPLLILFCALFLLLLCFFKYYNKQPLFQQHVDCDGIEETPFSSLS 60
           MKFSGNFNDL VLLLKPLLILFCALF LLLCFFKYYN+QPLFQ+HVD D IEETPFSSLS
Sbjct: 1   MKFSGNFNDLSVLLLKPLLILFCALFPLLLCFFKYYNQQPLFQEHVDSDRIEETPFSSLS 60

Query: 61  FKFPTYEDFLRTTTQNVDPPVYETSNEXXXXXXXXXXXXXXXXXCPREDPENFLPNGLRG 120
           FKFPTYEDFLRTTTQNVDPPVYETSNEXXXXXXXXXXXXXXXXXCPREDPE FLPNGLR 
Sbjct: 61  FKFPTYEDFLRTTTQNVDPPVYETSNEXXXXXXXXXXXXXXXXXCPREDPEIFLPNGLRC 120

Query: 121 SNDVRIQDDNEFDEPVEAISGSFDEDFIXXXXXXXXXXXXXXXXXXRLPSIPEESEYPIA 180
           SND+RIQDDNEFD+PVEAISG FD+DFI                   LPSIPEESEYPIA
Sbjct: 121 SNDIRIQDDNEFDDPVEAISGGFDQDFIEELKNEIKKAKAKAKSESGLPSIPEESEYPIA 180

Query: 181 MEEDSK-RRKXXXRSNRKGIRKELHEFHKQYTEKMRKYDTLNHQIAKEWKMKQSKGLVES 240
           MEEDSK  +K   RSN KGIRKELHEFHKQYTEKMRKYDTLNHQIAKEWKMKQSKGLVES
Sbjct: 181 MEEDSKGGKKGEERSNGKGIRKELHEFHKQYTEKMRKYDTLNHQIAKEWKMKQSKGLVES 240

Query: 241 VSSKGLCGCRPDKKGEAKTGENRGIDGELEVVYVVQMWVSWEFIVWQYKKALEISGGEGY 300
           VSSKGLCGCRPDKKGEAKTGENRG++GELEVVYVVQMWVSWEFIVWQYKK LEISG EGY
Sbjct: 241 VSSKGLCGCRPDKKGEAKTGENRGMEGELEVVYVVQMWVSWEFIVWQYKKGLEISGREGY 300

Query: 301 GSYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRVEYYATSRVGRRKLLQVPLLKEDEAKD 360
           GSYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRVEYYATSRVGRRKLLQVPLLKEDEAKD
Sbjct: 301 GSYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRVEYYATSRVGRRKLLQVPLLKEDEAKD 360

Query: 361 NKKTGRREEEEGVKMDRVIEILQECIRVFWQFIRADKLAHISSTSKSHIIEQQQERSSPA 420
           NKKTGR EEEEGVKMDRVIEILQECIRVFWQFIRADKLAHISSTSKSH +EQQQER+SPA
Sbjct: 361 NKKTGRTEEEEGVKMDRVIEILQECIRVFWQFIRADKLAHISSTSKSHNLEQQQERTSPA 420

Query: 421 YSNILNQILLDLHKKDRKLKKIIQRKTWRLKNCKDAFDEDDPDDEAYFLAMVDLKLVGRV 480
           YSNILNQILLDL KKDRKLKKIIQRKTWR KNC DAFDEDDPDDEAYFLAMVDLKLVGRV
Sbjct: 421 YSNILNQILLDLQKKDRKLKKIIQRKTWRFKNCIDAFDEDDPDDEAYFLAMVDLKLVGRV 480

Query: 481 LNMHTISIDQLKWCRHKLSCINFQTGKIRIQPSSFFSIYS 520
           LNM TISIDQLKWCRHKLSCI+FQTGKIRIQ SSFFSIYS
Sbjct: 481 LNMQTISIDQLKWCRHKLSCISFQTGKIRIQTSSFFSIYS 520

[Close]

BLAST of Carg04384-RA vs. NCBI nr
Match: XP_022990780.1 (uncharacterized protein LOC111487563 [Cucurbita maxima])

HSP 1 Score: 837.4 bits (2162), Expect = 2.6e-239
Identity = 453/520 (87.12%), Postives = 466/520 (89.62%), Query Frame = 0


Query: 1   MKFSGNFNDLPVLLLKPLLILFCALFLLLLCFFKYYNKQPLFQQHVDCDGIEETPFSSLS 60
           MKFSGNFNDL  LLLKPLLILFCALF LLLCFFKYYNKQPLF+     D IEETPFSSLS
Sbjct: 28  MKFSGNFNDLSDLLLKPLLILFCALFPLLLCFFKYYNKQPLFR-----DRIEETPFSSLS 87

Query: 61  FKFPTYEDFLRTTTQNVDPPVYETSNEXXXXXXXXXXXXXXXXXCPREDPENFLPNGLRG 120
           FKFPTYEDFLRTTTQNV+PP Y T   XXXXXXXXXXXXXXXXXCPREDPE FLPNGLR 
Sbjct: 88  FKFPTYEDFLRTTTQNVEPPAYATXXXXXXXXXXXXXXXXXXXXCPREDPEIFLPNGLRC 147

Query: 121 SNDVRIQDDNEFDEPVEAISGSFDEDFIXXXXXXXXXXXXXXXXXXRLPSIPEESEYPIA 180
           SND+RIQDDNEFD+PVEAISGSFD+DFI                   LPSIPEESEYPIA
Sbjct: 148 SNDIRIQDDNEFDDPVEAISGSFDQDFIEELKNEIMKAKAKAKSESGLPSIPEESEYPIA 207

Query: 181 MEEDSK-RRKXXXRSNRKGIRKELHEFHKQYTEKMRKYDTLNHQIAKEWKMKQSKGLVES 240
           MEEDSK R+K   R NRKGIRKELHEFHKQYTEKMRKYDTLNHQIAKEWKMKQSKGLVES
Sbjct: 208 MEEDSKGRKKEEERLNRKGIRKELHEFHKQYTEKMRKYDTLNHQIAKEWKMKQSKGLVES 267

Query: 241 VSSKGLCGCRPDKKGEAKTGENRGIDGELEVVYVVQMWVSWEFIVWQYKKALEISGGEGY 300
           VSSKGLCGCRP KKGEAKT ENRGI+GELEVVYVVQMWVSWEFIVWQYKKALEISG EGY
Sbjct: 268 VSSKGLCGCRPAKKGEAKTWENRGIEGELEVVYVVQMWVSWEFIVWQYKKALEISGREGY 327

Query: 301 GSYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRVEYYATSRVGRRKLLQVPLLKEDEAKD 360
           GSYRFNEVAEKFEHFKV IQRFME EW EEGSRVEYYA SRVGRRKLLQVPLL+EDEAKD
Sbjct: 328 GSYRFNEVAEKFEHFKVSIQRFMETEWLEEGSRVEYYARSRVGRRKLLQVPLLQEDEAKD 387

Query: 361 NKKTGRREEEEGVKMDRVIEILQECIRVFWQFIRADKLAHISSTSKSHIIEQQQERSSPA 420
            KKTGR EEE+GVKMDRVIEILQECIRVFWQFIRADKLAHISSTSKSHIIEQQQER+SPA
Sbjct: 388 KKKTGRIEEEDGVKMDRVIEILQECIRVFWQFIRADKLAHISSTSKSHIIEQQQERTSPA 447

Query: 421 YSNILNQILLDLHKKDRKLKKIIQRKTWRLKNCKDAFDEDDPDDEAYFLAMVDLKLVGRV 480
           YSNILNQILLDL KKDRKLKK+IQRKTWRLKNCKDA DEDDPDDEAYFLAMVDL LVGRV
Sbjct: 448 YSNILNQILLDLQKKDRKLKKMIQRKTWRLKNCKDASDEDDPDDEAYFLAMVDLTLVGRV 507

Query: 481 LNMHTISIDQLKWCRHKLSCINFQTGKIRIQPSSFFSIYS 520
           LNM TISIDQLKWCRHKL+CI+FQTGKIRIQPSSFFS YS
Sbjct: 508 LNMQTISIDQLKWCRHKLTCISFQTGKIRIQPSSFFSTYS 542

[Close]

BLAST of Carg04384-RA vs. NCBI nr
Match: XP_016902409.1 (PREDICTED: uncharacterized protein LOC103498480 [Cucumis melo])

HSP 1 Score: 427.9 bits (1099), Expect = 4.8e-116
Identity = 279/597 (46.73%), Postives = 337/597 (56.45%), Query Frame = 0


Query: 7   FNDLPVLLLKPLLILFCALFLLLLCFFKYY----NKQPLFQQHVDCDGIEETPFSSLSFK 66
           F ++ V +LK LLI  C LF   L +FKY+     KQPLF+        ++ PFS L+F+
Sbjct: 17  FFNVFVFILKTLLIFLCGLFPFFLRYFKYFKASDEKQPLFE--------DDDPFSVLTFR 76

Query: 67  FPTYEDFLRTTTQNVDPPVYETSNEXXXXXXXXXXXXXXXXXCPREDPENFLPNGLRGSN 126
           FPTYE+FL+ T +NVD    +   +                   RE  ENF PN L  +N
Sbjct: 77  FPTYEEFLK-TKENVDSNEKDILEQHCSIPSSPASDFILH---SREGSENFSPNELDCTN 136

Query: 127 DVRIQDD-------NEFDEPVEAISGSF-------------------------------- 186
           DV I+DD       N+FD   ++    F                                
Sbjct: 137 DVGIEDDFFDSIETNKFDNEEDSEDDGFIKALQIHTMEAKANEKDFLEQHFSIPSIPAPD 196

Query: 187 --------------------------------------DEDFIXXXXXXXXXXXXXXXXX 246
                                                 D+D I                 
Sbjct: 197 FFLHSREGSENLSPNDSDCTNDVDSIETNKFVNEEDSEDDDLIKALQIQIMKAKANAKAK 256

Query: 247 XRLPSIPEESEYPIAMEEDSKR--RKXXXRSNRKGIRKELHEFHKQYTEKMRKYDTLNHQ 306
             LPSIPEE++Y I   E   +  +K     N + I KELH+FHK+YTEKMRKYD LN Q
Sbjct: 257 SMLPSIPEETDYSITTNESDLKPWKKKQESFNHRDITKELHKFHKRYTEKMRKYDILNRQ 316

Query: 307 --IAKEWKMKQSKGLVESVSSKGLCGCRPDKKGEAKTGEN-RGIDGELEVVYVVQMWVSW 366
              AKE KM QSK  VESV +KG C C    KGE K+G N R IDGE+E+VYVVQ+WVSW
Sbjct: 317 KTYAKELKMMQSKESVESVLTKGFCVC----KGEKKSGGNRRRIDGEMEMVYVVQLWVSW 376

Query: 367 EFIVWQYKKALEISGGEGYGSYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRVEYYATSR 426
           EFIVW+YKKALEI G EGYGS RFN VAEKFEHFKV+I+RFMENE  EEGSRVE Y  SR
Sbjct: 377 EFIVWEYKKALEIYGREGYGSCRFNGVAEKFEHFKVMIERFMENEKIEEGSRVECYLRSR 436

Query: 427 VGRRKLLQVPLLKEDEAKDNKKTGRREE--EEGVKMDRVIEILQECIRVFWQFIRADKLA 486
           + RRKLLQVPLLKEDE K+    G  E+  E  V +DR+I ILQE IR+ WQFIR DKL 
Sbjct: 437 LVRRKLLQVPLLKEDEVKEE---GFEEDNKENAVTIDRLINILQESIRILWQFIRKDKLV 496

Query: 487 HISSTSKSHIIEQQQERSSPAYSNILNQILLDLHKKDRKLKKIIQRKTWRLKNCKDAFDE 515
           HIS+  K H +E +QE +SP++ +I  Q+LLDL KK RKLKKI++RK W LKNCK+  +E
Sbjct: 497 HISTNLKCH-LEAKQEFTSPSHFDIQTQLLLDLQKKKRKLKKIVKRKKWMLKNCKEELEE 556

[Close]

BLAST of Carg04384-RA vs. NCBI nr
Match: KGN52455.1 (hypothetical protein Csa_5G636480 [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-109
Identity = 279/634 (44.01%), Postives = 342/634 (53.94%), Query Frame = 0


Query: 6   NFNDLPVLLLKPLLILFCALFLLLLCFFKYY----NKQPLFQQHVDCDGIEETPFSSLSF 65
           +F ++ V++ K LLI  C LF   L +FKY+     KQP            E PFS+L+F
Sbjct: 16  DFCNVFVVIFKTLLIFLCGLFPFFLRYFKYFKASDEKQP------------EDPFSALTF 75

Query: 66  KFPTYEDFLRTTTQNVDPPVYETSNEXXXXXXXXXXXXXXXXXC---PREDPENFLPNGL 125
           +FPTYE+FL+ T +NVD      SNE                      RE  EN  PN L
Sbjct: 76  RFPTYEEFLK-TKENVD------SNEEDFLEQHCSMPSSSAPDFFLHSREGSENLSPNDL 135

Query: 126 RGSNDVRIQD---------------DNEFDEPVEAI------------------------ 185
             +NDV I+D               D+E DE ++ +                        
Sbjct: 136 DCTNDVGIEDEYVDSIKTNKFENEEDSEVDELIKPLQIHNMKAKANEKDFVEQHSSIPSR 195

Query: 186 ------------------------SGSF----------------DEDFIXXXXXXXXXXX 245
                                    G F                D+DFI           
Sbjct: 196 PAPNSFLHSRERSENLSPNYLDCTKGDFVDSIKTNKFEKEEDSEDDDFIKALQIQIMKAK 255

Query: 246 XXXXXXXRLPSIPEESEYPIAMEEDSKR--RKXXXRSNRKGIRKELHEFHKQYTEKMRKY 305
                   LPSIPEE++Y I   E+  +  +K     N + + KELH FHKQYTEKMRKY
Sbjct: 256 AKSV----LPSIPEETDYSITTNENDLKPWKKKQESFNHRDLTKELHRFHKQYTEKMRKY 315

Query: 306 DTLNHQ--IAKEWKMKQSKGLVESVSSKGLCGCRPDKKGEAKTGENRGIDGELEVVYVVQ 365
           D LN Q   AKE KM QSK  VESVS+KG C C    KGE KT E++GIDGE+E+VYVVQ
Sbjct: 316 DILNRQKTYAKELKMMQSKESVESVSTKGFCVC----KGEKKTEEDKGIDGEMEMVYVVQ 375

Query: 366 MWVSWEFIVWQYKKALEISGGEGYGSYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRVEY 425
           +WVSWEFIVW+YKKALEI G E YGS RFNEVAEKFEHFKV+IQRFMENE  EEGSRVE 
Sbjct: 376 LWVSWEFIVWEYKKALEIYGREDYGSCRFNEVAEKFEHFKVMIQRFMENEKIEEGSRVEC 435

Query: 426 YATSRVGRRKLLQVPLLKEDEAKDNKKTGRREE--EEGVKMDRVIEILQECIRVFWQFIR 485
           Y  SR+ RRK LQVPLLKEDE K+    G +E+  E  V +DR+I+ILQE IR+ WQFIR
Sbjct: 436 YVKSRLVRRKFLQVPLLKEDEVKEG---GFKEDNKENAVTIDRLIDILQESIRILWQFIR 495

Query: 486 ADKLAHISSTSKSHIIEQQQERSSPAYSNILNQILLDLHK-------------------- 515
            DKL HIS+    H +E +QE +SP++SN+  Q+L+DL K                    
Sbjct: 496 KDKLVHISTNLTCH-LETKQEFASPSHSNVQTQLLVDLQKVCYFPIKLHLCIEILLNYIT 555

[Close]

BLAST of Carg04384-RA vs. TAIR10
Match: AT5G39785.2 (Protein of unknown function (DUF1666))

HSP 1 Score: 195.7 bits (496), Expect = 7.2e-50
Identity = 124/338 (36.69%), Postives = 198/338 (58.58%), Query Frame = 0


Query: 202 ELHEFHKQYTEKMRKYDTLNHQIAKEWKMKQSKGLVESVSSKGLCGCRPD---------K 261
           E+H+FH+ Y E+MRK D L+ Q +    + QSK   ++ S+ G    +           +
Sbjct: 268 EVHKFHRSYRERMRKLDILSFQKSYALGLLQSKSPQQATSTLGSNPSQTSFSSVFSVNIR 327

Query: 262 KGEAKTGE-------NRGIDGELEVVYVVQMWVSWEFIVWQYKKALEISGGEGYGSYRFN 321
             +AK  E        + I GELE VYV QM +SWE + WQY+KA+E+   + YGS R+N
Sbjct: 328 LWKAKKSEIEPMVQFVKEIQGELENVYVGQMCLSWEILHWQYEKAIELLESDVYGSRRYN 387

Query: 322 EVAEKFEHFKVLIQRFMENEWSEEGSRVEYYATSRVGRRKLLQVPLLKEDEAKDNKKTGR 381
           EVA +F+ F+VL+QRF+ENE  EE  RV++Y   R   R LLQ+P+++ED  KD K   R
Sbjct: 388 EVAGEFQQFQVLLQRFLENEPFEE-PRVQHYIKRRCVLRNLLQIPVIREDGNKDKKNGRR 447

Query: 382 REEEEG----VKMDRVIEILQECIRVFWQFIRADKLAHI----SSTSKSHIIEQQQERSS 441
           R+ EE     +K D+++EI++E IR+FW+F+R DKL        S +KS I    +E S 
Sbjct: 448 RDYEENNDGVIKSDQLVEIMEETIRLFWRFVRCDKLTSSIHDQKSRTKSQIEPDHEEDSE 507

Query: 442 --PAYSNILNQILLDLHKKDRKLKKIIQRKTWRLKNCKDAFDEDDPDDEA-YFLAMVDLK 501
               ++ + +Q+    +  +++L+ +++ +   ++  +   +ED  +D+  +F + VD+K
Sbjct: 508 DLEMFAEVKSQL---QNVSEKRLRDVLKSERCIIRRFQKHKEEDSTEDQVLHFFSQVDMK 567

Query: 502 LVGRVLNMHTISIDQLKWCRHKLSCINFQTGKIRIQPS 513
           LV RVLNM  ++ D L WC +KL+ INF   ++ + PS
Sbjct: 568 LVTRVLNMSKLTRDHLVWCHNKLTKINFVNRRLHLDPS 601

[Close]

BLAST of Carg04384-RA vs. TAIR10
Match: AT1G69610.1 (Protein of unknown function (DUF1666))

HSP 1 Score: 145.6 bits (366), Expect = 8.6e-35
Identity = 119/366 (32.51%), Postives = 191/366 (52.19%), Query Frame = 0


Query: 168 LPSIPEESEYPIAMEEDSKRRKXXXRSNRKGIR-KELHEFHKQYTEKMRKYDTLNHQIAK 227
           L +I EESE P+   ++ K  K   + ++   R  E+H+ +K Y  KMRK D ++ Q   
Sbjct: 282 LCTILEESETPL---QELKPLKIEPKPDQHKDRIAEIHKVYKNYAVKMRKLDVIDSQTMH 341

Query: 228 EWKM-------KQSKGLVESVSSKGLCGCRPDKKGEAKTGENRGI----DGELEVVYVVQ 287
              +       K S+   +   S       P KK   +   +  +      + E VYV Q
Sbjct: 342 SISLLKLKDSSKPSRNTDKPPKSSLHQNIWPFKKHTLECDPSERLVKEASRDFETVYVGQ 401

Query: 288 MWVSWEFIVWQYKKALEISGGEGYGSYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRVEY 347
           + +SWE + WQY K LE        +Y++N VA +F+ F+VL+QRF+ENE  +  SRVE 
Sbjct: 402 VCLSWEMLRWQYDKVLEFD--SQVTTYQYNLVAGEFQLFQVLLQRFVENEPFQNSSRVET 461

Query: 348 YATSRVGRRKLLQVPLLKEDEAKDNKKTGRREEEEGVKMDRVIEILQECIRVFWQFIRAD 407
           Y  +R   +  LQ+PL+++D  + +KK  R E E  VK + + EI++E + VFW+F+ AD
Sbjct: 462 YLKNRRHFQNFLQIPLVRDD--RSSKKKCRYEGEFAVKTEMLREIIRESMSVFWEFLCAD 521

Query: 408 KLAHISSTSKSHIIEQQQERSSPAYS---NILNQILLDLHKKDRKLKKIIQRKTWRLKNC 467
           K    S    SH     Q + SP  S    +L  I   L KK++KLK+I + ++  +K  
Sbjct: 522 KDEFTSMMKVSH-----QTQVSPQDSLDLELLTDIRTHLQKKEKKLKEIQRSQSCIVKKL 581

Query: 468 KDAFDEDDPD-DEAYFLAMVDLKLVGRVLNMHTISIDQLKWCRHKLSCINFQTGKIRIQP 518
           K    +      +   +A ++L+LV RV+ M  ++ ++L WC+ KL  I+F   KI ++P
Sbjct: 582 KKNESKSSIGVKDELLIAKIELRLVSRVMYMSKLTTEKLHWCQEKLEKISFNGRKIHMEP 633

[Close]

BLAST of Carg04384-RA vs. TAIR10
Match: AT3G20260.1 (Protein of unknown function (DUF1666))

HSP 1 Score: 104.4 bits (259), Expect = 2.2e-22
Identity = 76/261 (29.12%), Postives = 123/261 (47.13%), Query Frame = 0


Query: 267 ELEVVYVVQMWVSWEFIVWQYKKALEISGGEGYGSYRFNEVAEKFEHFKVLIQRFMENEW 326
           +LE  YV Q+ ++WE +  QY +   +   +      +N  A+ F+ F VL+QR++ENE 
Sbjct: 198 DLETAYVAQLCLTWEALHCQYTQLSHLISCQPETPTCYNHTAQLFQQFLVLLQRYIENEP 257

Query: 327 SEEGSRVEYYATSRVGRRKLLQVPLLKEDEAKD-NKKTGRREEEEGVKMDRVIEILQECI 386
            E+GSR E YA +R    KLLQ P ++  + K+  K TG       V  D +I++++  I
Sbjct: 258 FEQGSRSELYARARNAMPKLLQAPKIQGSDKKEMEKDTGFM-----VLADDLIKVIESSI 317

Query: 387 RVFWQFIRADKLA--------------HISSTSKSHIIEQQQERSSPAYSNILNQILLDL 446
             F  F++ DK                H++ST+   +++   ++              +L
Sbjct: 318 LTFNVFLKMDKKKPNGGIHLFGNHNNNHVNSTTPLLLVQSSIDKKRVKAK--------EL 377

Query: 447 HKKDRKLKKIIQRKTWRLKNCKDAFDEDDPDDEAYFLAMVDLKLVGRVLNMHTISIDQLK 506
            KK + L+K    +TW              +      A +D+KL  RVL M  IS +QL 
Sbjct: 378 SKKTKGLRKKSWPQTW--------------EGVQLLFAAIDIKLATRVLRMSKISKEQLL 431

Query: 507 WCRHKLSCINFQTGKIRIQPS 513
           WC  K+  +NF  GK++  PS
Sbjct: 438 WCEEKMKKLNFSAGKLQRHPS 431

[Close]

BLAST of Carg04384-RA vs. TAIR10
Match: AT1G73850.1 (Protein of unknown function (DUF1666))

HSP 1 Score: 87.8 bits (216), Expect = 2.1e-17
Identity = 78/283 (27.56%), Postives = 128/283 (45.23%), Query Frame = 0


Query: 233 SKGLVESVSSKGLCGCRPDKKGEAKTGENRGIDGELEVVYVVQMWVSWEFIVWQYKKALE 292
           S+ +V  +SS G    +  K+     G       ELE  YV Q+ ++WE + W YK    
Sbjct: 353 SERIVHKLSSNG--HKKKQKQYPGSNGSRPNPYVELESAYVAQICLTWEALSWNYK---N 412

Query: 293 ISGGEGYGSYRFNEV------AEKFEHFKVLIQRFMENEWSEEGSRVEYYATSRVGRRKL 352
                      FN+V      A++F  F +L+QR++ENE  E G R E YA  R    KL
Sbjct: 413 FERKRSTTQRSFNDVGCPAGIADQFRTFHILLQRYVENEPYEHGRRPEIYARMRTLAPKL 472

Query: 353 LQVPLLKEDEAKDNKKTGRREE-EEGVKMDRVIEILQECIRVFWQFIRADKLAHISSTSK 412
           L VP  +                   +     + I++ECIR F  F++ADK        K
Sbjct: 473 LLVPEYQXXXXXXXXXXXXXXXFRSRISSASFLMIMEECIRTFMNFLQADKEKPCQKIIK 532

Query: 413 SHIIEQQQERSSPAYSNILNQILLDLHKKDRKLKKIIQRKTWRLKNCKDAFDEDDPDDEA 472
           +     ++    P   +++ ++     KK  KLK+ ++R    ++  K + +E    +  
Sbjct: 533 AFFGRSKRGPVDPTLVHLMKKVNT---KKKTKLKE-MRRGGKYMRKKKMSIEE----EME 592

Query: 473 YFLAMVDLKLVGRVLNMHTISIDQLKWCRHKLSCIN-FQTGKI 508
             + ++DLK+V RVL M+ ++ + L WC  K+S +   Q GK+
Sbjct: 593 ILMGLIDLKVVSRVLRMNEMNEENLHWCEEKMSKVKIIQGGKV 622

[Close]

BLAST of Carg04384-RA vs. TAIR10
Match: AT3G01175.1 (Protein of unknown function (DUF1666))

HSP 1 Score: 53.5 bits (127), Expect = 4.4e-07
Identity = 44/149 (29.53%), Postives = 73/149 (48.99%), Query Frame = 0


Query: 207 HKQYTEKMRKYDTLNHQIAKEWKMKQSKGLVESVSSKGLCGCRPDKKGEAKTGENR---G 266
           +K+Y E+MR YD L+   +    +  ++    S+S  G            KT E R    
Sbjct: 263 YKKYCERMRWYDILSRDRSYGLNVITNQLTASSLSLWG------------KTAEKRIKQS 322

Query: 267 IDGELEVVYVVQMWVSWEFIVWQYKKALEISGGEGYGSYRFNEVAEKFEHFKVLIQRFME 326
           +  +LE+VYV Q+ +SWE +  QY    + S          ++++ +F++F+VL++RF+E
Sbjct: 323 MKKDLELVYVAQVCLSWEALQHQYILVRDSSNPADSRGRFDDDISREFQNFQVLLERFLE 382

Query: 327 NEWSEEGSRVEYYATSRVGRRKLLQVPLL 353
           +E   EG RV  +   R       QVP L
Sbjct: 383 DERC-EGKRVLSFVQRRFELISFFQVPRL 398

[Close]

BLAST of Carg04384-RA vs. TrEMBL
Match: tr|A0A1S4E2E7|A0A1S4E2E7_CUCME (uncharacterized protein LOC103498480 OS=Cucumis melo OX=3656 GN=LOC103498480 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.2e-116
Identity = 279/597 (46.73%), Postives = 337/597 (56.45%), Query Frame = 0


Query: 7   FNDLPVLLLKPLLILFCALFLLLLCFFKYY----NKQPLFQQHVDCDGIEETPFSSLSFK 66
           F ++ V +LK LLI  C LF   L +FKY+     KQPLF+        ++ PFS L+F+
Sbjct: 17  FFNVFVFILKTLLIFLCGLFPFFLRYFKYFKASDEKQPLFE--------DDDPFSVLTFR 76

Query: 67  FPTYEDFLRTTTQNVDPPVYETSNEXXXXXXXXXXXXXXXXXCPREDPENFLPNGLRGSN 126
           FPTYE+FL+ T +NVD    +   +                   RE  ENF PN L  +N
Sbjct: 77  FPTYEEFLK-TKENVDSNEKDILEQHCSIPSSPASDFILH---SREGSENFSPNELDCTN 136

Query: 127 DVRIQDD-------NEFDEPVEAISGSF-------------------------------- 186
           DV I+DD       N+FD   ++    F                                
Sbjct: 137 DVGIEDDFFDSIETNKFDNEEDSEDDGFIKALQIHTMEAKANEKDFLEQHFSIPSIPAPD 196

Query: 187 --------------------------------------DEDFIXXXXXXXXXXXXXXXXX 246
                                                 D+D I                 
Sbjct: 197 FFLHSREGSENLSPNDSDCTNDVDSIETNKFVNEEDSEDDDLIKALQIQIMKAKANAKAK 256

Query: 247 XRLPSIPEESEYPIAMEEDSKR--RKXXXRSNRKGIRKELHEFHKQYTEKMRKYDTLNHQ 306
             LPSIPEE++Y I   E   +  +K     N + I KELH+FHK+YTEKMRKYD LN Q
Sbjct: 257 SMLPSIPEETDYSITTNESDLKPWKKKQESFNHRDITKELHKFHKRYTEKMRKYDILNRQ 316

Query: 307 --IAKEWKMKQSKGLVESVSSKGLCGCRPDKKGEAKTGEN-RGIDGELEVVYVVQMWVSW 366
              AKE KM QSK  VESV +KG C C    KGE K+G N R IDGE+E+VYVVQ+WVSW
Sbjct: 317 KTYAKELKMMQSKESVESVLTKGFCVC----KGEKKSGGNRRRIDGEMEMVYVVQLWVSW 376

Query: 367 EFIVWQYKKALEISGGEGYGSYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRVEYYATSR 426
           EFIVW+YKKALEI G EGYGS RFN VAEKFEHFKV+I+RFMENE  EEGSRVE Y  SR
Sbjct: 377 EFIVWEYKKALEIYGREGYGSCRFNGVAEKFEHFKVMIERFMENEKIEEGSRVECYLRSR 436

Query: 427 VGRRKLLQVPLLKEDEAKDNKKTGRREE--EEGVKMDRVIEILQECIRVFWQFIRADKLA 486
           + RRKLLQVPLLKEDE K+    G  E+  E  V +DR+I ILQE IR+ WQFIR DKL 
Sbjct: 437 LVRRKLLQVPLLKEDEVKEE---GFEEDNKENAVTIDRLINILQESIRILWQFIRKDKLV 496

Query: 487 HISSTSKSHIIEQQQERSSPAYSNILNQILLDLHKKDRKLKKIIQRKTWRLKNCKDAFDE 515
           HIS+  K H +E +QE +SP++ +I  Q+LLDL KK RKLKKI++RK W LKNCK+  +E
Sbjct: 497 HISTNLKCH-LEAKQEFTSPSHFDIQTQLLLDLQKKKRKLKKIVKRKKWMLKNCKEELEE 556

[Close]

BLAST of Carg04384-RA vs. TrEMBL
Match: tr|A0A0A0KS72|A0A0A0KS72_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636480 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 9.8e-110
Identity = 279/634 (44.01%), Postives = 342/634 (53.94%), Query Frame = 0


Query: 6   NFNDLPVLLLKPLLILFCALFLLLLCFFKYY----NKQPLFQQHVDCDGIEETPFSSLSF 65
           +F ++ V++ K LLI  C LF   L +FKY+     KQP            E PFS+L+F
Sbjct: 16  DFCNVFVVIFKTLLIFLCGLFPFFLRYFKYFKASDEKQP------------EDPFSALTF 75

Query: 66  KFPTYEDFLRTTTQNVDPPVYETSNEXXXXXXXXXXXXXXXXXC---PREDPENFLPNGL 125
           +FPTYE+FL+ T +NVD      SNE                      RE  EN  PN L
Sbjct: 76  RFPTYEEFLK-TKENVD------SNEEDFLEQHCSMPSSSAPDFFLHSREGSENLSPNDL 135

Query: 126 RGSNDVRIQD---------------DNEFDEPVEAI------------------------ 185
             +NDV I+D               D+E DE ++ +                        
Sbjct: 136 DCTNDVGIEDEYVDSIKTNKFENEEDSEVDELIKPLQIHNMKAKANEKDFVEQHSSIPSR 195

Query: 186 ------------------------SGSF----------------DEDFIXXXXXXXXXXX 245
                                    G F                D+DFI           
Sbjct: 196 PAPNSFLHSRERSENLSPNYLDCTKGDFVDSIKTNKFEKEEDSEDDDFIKALQIQIMKAK 255

Query: 246 XXXXXXXRLPSIPEESEYPIAMEEDSKR--RKXXXRSNRKGIRKELHEFHKQYTEKMRKY 305
                   LPSIPEE++Y I   E+  +  +K     N + + KELH FHKQYTEKMRKY
Sbjct: 256 AKSV----LPSIPEETDYSITTNENDLKPWKKKQESFNHRDLTKELHRFHKQYTEKMRKY 315

Query: 306 DTLNHQ--IAKEWKMKQSKGLVESVSSKGLCGCRPDKKGEAKTGENRGIDGELEVVYVVQ 365
           D LN Q   AKE KM QSK  VESVS+KG C C    KGE KT E++GIDGE+E+VYVVQ
Sbjct: 316 DILNRQKTYAKELKMMQSKESVESVSTKGFCVC----KGEKKTEEDKGIDGEMEMVYVVQ 375

Query: 366 MWVSWEFIVWQYKKALEISGGEGYGSYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRVEY 425
           +WVSWEFIVW+YKKALEI G E YGS RFNEVAEKFEHFKV+IQRFMENE  EEGSRVE 
Sbjct: 376 LWVSWEFIVWEYKKALEIYGREDYGSCRFNEVAEKFEHFKVMIQRFMENEKIEEGSRVEC 435

Query: 426 YATSRVGRRKLLQVPLLKEDEAKDNKKTGRREE--EEGVKMDRVIEILQECIRVFWQFIR 485
           Y  SR+ RRK LQVPLLKEDE K+    G +E+  E  V +DR+I+ILQE IR+ WQFIR
Sbjct: 436 YVKSRLVRRKFLQVPLLKEDEVKEG---GFKEDNKENAVTIDRLIDILQESIRILWQFIR 495

Query: 486 ADKLAHISSTSKSHIIEQQQERSSPAYSNILNQILLDLHK-------------------- 515
            DKL HIS+    H +E +QE +SP++SN+  Q+L+DL K                    
Sbjct: 496 KDKLVHISTNLTCH-LETKQEFASPSHSNVQTQLLVDLQKVCYFPIKLHLCIEILLNYIT 555

[Close]

BLAST of Carg04384-RA vs. TrEMBL
Match: tr|K7LFR3|K7LFR3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100789978 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.4e-60
Identity = 149/360 (41.39%), Postives = 218/360 (60.56%), Query Frame = 0


Query: 168 LPSIPEESEYPIAMEEDSKRRKXXXRSNRKGIRKELHEFHKQYTEKMRKYDTLNHQIAKE 227
           LP+I E+SE P  M ED K  K   +        EL +F++ Y E+MRK+D LN+Q    
Sbjct: 376 LPTILEDSESPRIM-EDLKPWKIDEKLQHGSTTNELPKFYRSYRERMRKFDILNYQKMYA 435

Query: 228 WKMKQSKGLVESVSS-------------KGLC-GCRPDKKGEAKTGENRGIDGELEVVYV 287
             + QSK  ++S S+              G C   R + K +      R +  +LE+VYV
Sbjct: 436 IGVLQSKDPLQSFSTHKNPSPAFTSILPHGFCLSRRKNTKADPMKKFIRELYSDLEMVYV 495

Query: 288 VQMWVSWEFIVWQYKKALEISGGEGYGSYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRV 347
            Q+ +SWEF+ W+Y+KAL++   + YG  RFNEVA +F+ F+VL+QRF+ENE   +G+RV
Sbjct: 496 GQLCLSWEFLQWEYEKALKLWESDQYGLLRFNEVAGEFQQFQVLLQRFIENEPFLQGARV 555

Query: 348 EYYATSRVGRRKLLQVPLLKEDEAKDNKKTGRRE-EEEGVKMDRVIEILQECIRVFWQFI 407
           E YA +R   R LLQVP+++ED AKD +K  +RE E++ +  D ++EIL+E IR  W FI
Sbjct: 556 ENYARNRCAMRNLLQVPVIREDNAKDKRKLRKREAEKDAITSDMLVEILEESIRTIWHFI 615

Query: 408 RADKLAHISSTSKSHIIEQQQERSSPAYSNILNQILLDLHKKDRKLKKIIQRKTWRLKNC 467
           RADK A  SS +   + E Q E   P+ S +L +I +DL KK+++L+++++     LK  
Sbjct: 616 RADKDA--SSLALKGLRENQVELQDPSDSQLLVEIRMDLQKKEKRLRELLRSGNCILKKF 675

Query: 468 KDAFDEDDPDDEAYFLAMVDLKLVGRVLNMHTISIDQLKWCRHKLSCINFQTGKIRIQPS 513
           +  + ED  D   YF + VD++LV RVLNM  I+ DQL WCR KL+ INF   +I ++PS
Sbjct: 676 QKHYHEDGADQVLYFFSQVDMRLVWRVLNMSRITTDQLAWCRSKLNKINFVNRRIHVEPS 732

[Close]

BLAST of Carg04384-RA vs. TrEMBL
Match: tr|K7LFR5|K7LFR5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100789978 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-58
Identity = 148/360 (41.11%), Postives = 217/360 (60.28%), Query Frame = 0


Query: 168 LPSIPEESEYPIAMEEDSKRRKXXXRSNRKGIRKELHEFHKQYTEKMRKYDTLNHQIAKE 227
           LP+I E+SE P  M ED K  K   +        EL +F++ Y E+MRK+D LN+Q    
Sbjct: 376 LPTILEDSESPRIM-EDLKPWKIDEKLQHGSTTNELPKFYRSYRERMRKFDILNYQKMYA 435

Query: 228 WKMKQSKGLVESVSS-------------KGLC-GCRPDKKGEAKTGENRGIDGELEVVYV 287
             + QSK  ++S S+              G C   R + K +      R +  +LE+VYV
Sbjct: 436 IGVLQSKDPLQSFSTHKNPSPAFTSILPHGFCLSRRKNTKADPMKKFIRELYSDLEMVYV 495

Query: 288 VQMWVSWEFIVWQYKKALEISGGEGYGSYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRV 347
            Q+ +SWEF+ W+Y+KAL++   + YG  RFNEVA +F+ F+VL+QRF+ENE   +G+RV
Sbjct: 496 GQLCLSWEFLQWEYEKALKLWESDQYGLLRFNEVAGEFQQFQVLLQRFIENEPFLQGARV 555

Query: 348 EYYATSRVGRRKLLQVPLLKEDEAKDNKKTGRRE-EEEGVKMDRVIEILQECIRVFWQFI 407
           E YA +R   R LLQVP+++ D AKD +K  +RE E++ +  D ++EIL+E IR  W FI
Sbjct: 556 ENYARNRCAMRNLLQVPVIR-DNAKDKRKLRKREAEKDAITSDMLVEILEESIRTIWHFI 615

Query: 408 RADKLAHISSTSKSHIIEQQQERSSPAYSNILNQILLDLHKKDRKLKKIIQRKTWRLKNC 467
           RADK A  SS +   + E Q E   P+ S +L +I +DL KK+++L+++++     LK  
Sbjct: 616 RADKDA--SSLALKGLRENQVELQDPSDSQLLVEIRMDLQKKEKRLRELLRSGNCILKKF 675

Query: 468 KDAFDEDDPDDEAYFLAMVDLKLVGRVLNMHTISIDQLKWCRHKLSCINFQTGKIRIQPS 513
           +  + ED  D   YF + VD++LV RVLNM  I+ DQL WCR KL+ INF   +I ++PS
Sbjct: 676 QKHYHEDGADQVLYFFSQVDMRLVWRVLNMSRITTDQLAWCRSKLNKINFVNRRIHVEPS 731

[Close]

BLAST of Carg04384-RA vs. TrEMBL
Match: tr|K7MUS9|K7MUS9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100785051 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 5.1e-58
Identity = 148/360 (41.11%), Postives = 215/360 (59.72%), Query Frame = 0


Query: 168 LPSIPEESEYPIAMEEDSKRRKXXXRSNRKGIRKELHEFHKQYTEKMRKYDTLNHQIAKE 227
           LP+I E+SE P  M ED K  K   +        EL +F++ Y E+MRK+D LN+Q    
Sbjct: 405 LPTILEDSESPRIM-EDLKPWKIDEKLQHGSTTNELPKFYRSYRERMRKFDILNYQKMYA 464

Query: 228 WKMKQSKGLVESVSSKG----------LCGCRPDKKGEAKTGEN----RGIDGELEVVYV 287
             + QSK  ++S S++             G R  ++   +        R +  +LE+VYV
Sbjct: 465 LGVLQSKDPLQSFSTRKNPSPAFTSILTRGFRLSRRKNTEVDPMRKFIRELYSDLEMVYV 524

Query: 288 VQMWVSWEFIVWQYKKALEISGGEGYGSYRFNEVAEKFEHFKVLIQRFMENEWSEEGSRV 347
            Q+ +SWEF+ W+Y+KAL++   + YG  RFNEVA +F+ F VL+QRF+ENE   +G RV
Sbjct: 525 GQLCLSWEFLQWEYEKALKLWESDQYGLLRFNEVAGEFQQFHVLLQRFIENEPFLQGPRV 584

Query: 348 EYYATSRVGRRKLLQVPLLKEDEAKDNKKTGRRE-EEEGVKMDRVIEILQECIRVFWQFI 407
           E YA +R   R LLQVP+++ED AKD +K  +RE +++ +  D ++EIL+E IR  W+FI
Sbjct: 585 ENYARNRCAMRNLLQVPVIREDNAKDKRKFRKREADKDAITSDMLVEILEESIRTIWRFI 644

Query: 408 RADKLAHISSTSKSHIIEQQQERSSPAYSNILNQILLDLHKKDRKLKKIIQRKTWRLKNC 467
           RADK A  SS +     E Q E   P+ S IL +I  DL KK+++L+++++  +  LK  
Sbjct: 645 RADKDA--SSLALKGQRENQVELQDPSDSQILVEIRTDLQKKEKRLRELLRSGSCILKKF 704

Query: 468 KDAFDEDDPDDEAYFLAMVDLKLVGRVLNMHTISIDQLKWCRHKLSCINFQTGKIRIQPS 513
           +    ED  D   YF + VD+KLV RVLNM  I+ DQL WCR KL+ INF   +I ++PS
Sbjct: 705 QKHHHEDGADQVLYFFSQVDMKLVWRVLNMSRITTDQLAWCRSKLNKINFVNRRIHVEPS 761

The following BLAST results are available for this feature:

BLAST of Carg04384-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959969.1	2.5e-266	94.03	uncharacterized protein LOC111460861 [Cucurbita moschata]	[more]
XP_023544885.1	1.0e-251	90.00	uncharacterized protein LOC111804322 [Cucurbita pepo subsp. pepo]	[more]
XP_022990780.1	2.6e-239	87.12	uncharacterized protein LOC111487563 [Cucurbita maxima]	[more]
XP_016902409.1	4.8e-116	46.73	PREDICTED: uncharacterized protein LOC103498480 [Cucumis melo]	[more]
KGN52455.1	1.5e-109	44.01	hypothetical protein Csa_5G636480 [Cucumis sativus]	[more]

BLAST of Carg04384-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G39785.2	7.2e-50	36.69	Protein of unknown function (DUF1666)	[more]
AT1G69610.1	8.6e-35	32.51	Protein of unknown function (DUF1666)	[more]
AT3G20260.1	2.2e-22	29.12	Protein of unknown function (DUF1666)	[more]
AT1G73850.1	2.1e-17	27.56	Protein of unknown function (DUF1666)	[more]
AT3G01175.1	4.4e-07	29.53	Protein of unknown function (DUF1666)	[more]

BLAST of Carg04384-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg04384-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E2E7\|A0A1S4E2E7_CUCME	3.2e-116	46.73	uncharacterized protein LOC103498480 OS=Cucumis melo OX=3656 GN=LOC103498480 PE=...	[more]
tr\|A0A0A0KS72\|A0A0A0KS72_CUCSA	9.8e-110	44.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636480 PE=4 SV=1	[more]
tr\|K7LFR3\|K7LFR3_SOYBN	1.4e-60	41.39	Uncharacterized protein OS=Glycine max OX=3847 GN=100789978 PE=4 SV=1	[more]
tr\|K7LFR5\|K7LFR5_SOYBN	1.0e-58	41.11	Uncharacterized protein OS=Glycine max OX=3847 GN=100789978 PE=4 SV=1	[more]
tr\|K7MUS9\|K7MUS9_SOYBN	5.1e-58	41.11	Uncharacterized protein OS=Glycine max OX=3847 GN=100785051 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR008195	Ribosomal_L34Ae
IPR012870	DUF1666

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg04384	Carg04384	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg04384-RA	Carg04384-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04384-RA.exon.1	Carg04384-RA.exon.1	exon
Carg04384-RA.exon.2	Carg04384-RA.exon.2	exon
Carg04384-RA.exon.3	Carg04384-RA.exon.3	exon
Carg04384-RA.exon.4	Carg04384-RA.exon.4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04384-RA.CDS.1	Carg04384-RA.CDS.1	CDS
Carg04384-RA.CDS.2	Carg04384-RA.CDS.2	CDS
Carg04384-RA.CDS.3	Carg04384-RA.CDS.3	CDS
Carg04384-RA.CDS.4	Carg04384-RA.CDS.4	CDS

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 148..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..200
None	No IPR available	PANTHER	PTHR10759:SF1	SUBFAMILY NOT NAMED	coord: 116..512
IPR012870	Protein of unknown function DUF1666	PFAM	PF07891	DUF1666	coord: 267..514 e-value: 1.3E-67 score: 228.0
IPR008195	Ribosomal protein L34Ae	PANTHER	PTHR10759	60S RIBOSOMAL PROTEIN L34	coord: 116..512