Carg03561-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03561-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Squamosa promoter binding protein
Location	Cucurbita_argyrosperma_scaffold_006 : 690168 .. 693215 (-)
Sequence length	1544

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAAAAACTCCCTCCGCTGGCAATGGCCCCGTCTTTCCCATTTCCCCTTTAGTAGCTCCATTTCCTTCTCTTTCCCTCCCAACACACACACTCATTATGACCAACCCTCTTTCTTAGAGAGAACCCCCAATGGAAATGGATTGCAGCTCTTTGACTGAGTCTGGTGGGTCTTCCACTTCCTCGCCGCCCAATTCATCAGCCGAATCCCTCAATGGCCTCAAATTTGGACACAAAATTTACTTTGAAGATGTGGGTATTGGAGAGCTTCCTAAATCAGGTGGGGGAGGATCTTTCTCATCCTCGCCTCTTATTGCATCAACACCCACCAAGAAGCTTAGGGGAGGCGTTGTTCAGCCGGCTCAGCCCCCTAGGTGTCAGGTTGAAGGCTGTAAAGTAGATCTAAGTGATGTTAAGGCTTACTATTCCAGACACAAAGTTTGTACTATGCACTCCAAATCCCCCAAGGTCATTGTTGCTGGTCTTGAGCAAAGGTTTTGCCAACAGTGTAGCAGGTCACCTCACACTCTCTTTGCTTTTATCTTTGATTAGTTCTTATGAATATTAGTTCTTAGATTCATTTTACTGTGTTGTTCTGAGTTTCCTTTTTGTTTCAAAGCTTAGATTCATCTTTTTCCTTCAACTACTTTGGTTGAATCTGTGAATGGATGTTCATATGGAGCTCTAGCATAAGAGGTTTAGCACTCAATACAATAGCCTACCCTTCATCAAGCTGTTCGTTCGCTTTGTGTTCCTGCTTGATTTTCTATTCCAACTTTTGTGATATGAATTGAATGCAATAGAAGCTACATAACTTGATATTCTACTCAATCCCTTAAAAGTCCAAGGAGGCTACCAAAATTCCCTACCATTGGTCAAAATAAGAACAGAAACCTCTCATTGATATAATGAAAAGGAAGAAAATATGCAATCAAGAACTTAGAAACAATTACAAGCTTCTTTCTCATGCATATTAATGTGAATGGAACAAACTTGAGGGGTGGATAGCCTGAAGACTCCAAGAGCTGGAATTAATGTTGTCTTGGACTTTGCCATTAATGCTCCTAAGAATTGCTAAGAAATCTTTAGAAGTTTGAACAAAAACTATGAGAAAATTAAGGAGGGATTGGTGTCGTTGCGTGATGCTAATGCATTGAGTACATAGCATCAAGCCGCTCTCAAACAGTGTCCCAACGCCATCCTTGCAGATCTTTAAGCTTGTGTTGTGGTAGTGTGTCCAAATGCTGTTCTCCAGATTTTGTGCTTTGTTTCCTTCTCTTGACTTGATATCGTTGATTCTTAGCTCTGTTTACTCTAAATGTCCTGGTTTGCTCCATTTTTACAAAATATACAGTAGTATTCTTAGCTTCTTTCCTTTACCGTGCATATTGTGAGATCCCACATTGGCAGGGGAGGAGAACGAAACAATTTTTATAAGGGTATGGAAACCTCTCCCTAGTAGACATGTTTTAAAAACCTCGAGGGGAAACCCGAAAGGGAAAGCCTAAAGAGAACAATATTTGTTAGCGGTAGGCTTGAGCCATTACAAATGGTATCAAAGCCAAACACTGCTAGCAAGGAGGCTGAGCCCCGAAGGTGGTGGACATGAGGCGGTGTGCCAGCAAGGACGCTGGGCCCCGAAGGGGGTGAATTGTGAGATCCCACGTTAGTTGGAGAGGAGAACGAAACATTATTTTGAAAGAATTACGCTCTTTTCGGAGGATTTTGGGAGAAGAGTAGTTTAATCTATCGTTGATTTTGAACGGAATGAATGAAAATACAACTATATGTCACTAATGAAGATCTAAATTGATAAACTTGGATCTAAATTGATTCACGAAATTAAATTTATACAACCGCAAGGTTTGATGTATGCAAAATTCTCAAGTAGTTCACTGAAAGTGATTGCGGCTTTGGTTTTTATCAGATTTCATCAGCTTCCTGAATTTGATCAAGGAAAACGTAGCTGCCGCAGACGTCTGGCTGGGCATAATGAGCGGCGTAGGAAGCCACCACCTGGGTCACTGTTGTCCACTCGTTATGGTCGCTTCTCTTCATCTATCTTTGGTTAGACATTGTCATTATTCATTGAAATGATATGTCTTGACTTAGCTTTGTGCAAAGATTAACGACCACTTGTTTGCTGCTTGCAATGATAGAAAACAGCAGCAGAGTTGGAAGCTTTCTGATGGACTTCAGTGCATATCCAAAGCTGACTGGAAAGGATGTTTGGTCGTCGTCGGGTATGAAAGCATCATCCGAACGGGTGCCCGGAAATCAAGGCATCACTTCTATGGGGAAATATATCCCAAATCCTTGGCAGAGCAATCCATCTGAACTTCTCCTGCCAGTTTCTTCAGCAGGTGGAACCAGTTATTCTGGTCCTGGTAATCCTTCTGGGGAATGCATCAATGGAGTCACTGACTCATCCTGTGCTCTCTCTCTTCTGTCAAACCAAACATGGGGCTCCAGAAACCGATCGACGCCTCTCGAGGTAAATGCAGCCTTGTTGAATGCTGAAGGTGCACTTGTGGCTCAAACAACATCAGCTCATGCTGCTACCAATCACTTCCCGATGTCGATGTCGATGTCGTCGTGGAGTTTCAAGGGAAATGAAGCTCCTGCTAGCATCTCCCTGGACCTGGCATCTGACTTGGGTCTGAATCATCAAGTTTCACAGGCTCTTACTACCAGTTCTTTCTCTGGTGATGTCCAGTTTCCTAATCAAGGTAGTAGGAGGCCATACATGGAACTTGGGCAATCAGCAGGTGCCTTCGACTCAACCCAGCAGCATCTGCACTGGTCACTTTGAGGTGCTGCTGCACTTCAGCTCTCTGGTTCCAGTGAAATCCACTCCTCTTTTAGGCCTTTTCAAATGAATAATTGGCTCGAGACATCGAACTCATTGTCTACTTCATTCCCCCCCTGGTTGGGTTTGTTGAAAACTATTGTTCCTTTTGTGTTTTATGAACTACATCAGGAAGACTTGAGACCTGAACTCTTTCCCTTTTGACATTTTACTATGGAACCGTCTGGTGCTTGTGTGTTT

mRNA sequence

AATTAAAAACTCCCTCCGCTGGCAATGGCCCCGTCTTTCCCATTTCCCCTTTAGTAGCTCCATTTCCTTCTCTTTCCCTCCCAACACACACACTCATTATGACCAACCCTCTTTCTTAGAGAGAACCCCCAATGGAAATGGATTGCAGCTCTTTGACTGAGTCTGGTGGGTCTTCCACTTCCTCGCCGCCCAATTCATCAGCCGAATCCCTCAATGGCCTCAAATTTGGACACAAAATTTACTTTGAAGATGTGGGTATTGGAGAGCTTCCTAAATCAGGTGGGGGAGGATCTTTCTCATCCTCGCCTCTTATTGCATCAACACCCACCAAGAAGCTTAGGGGAGGCGTTGTTCAGCCGGCTCAGCCCCCTAGGTGTCAGGTTGAAGGCTGTAAAGTAGATCTAAGTGATGTTAAGGCTTACTATTCCAGACACAAAGTTTGTACTATGCACTCCAAATCCCCCAAGGTCATTGTTGCTGGTCTTGAGCAAAGGTTTTGCCAACAGTGTAGCAGATTTCATCAGCTTCCTGAATTTGATCAAGGAAAACGTAGCTGCCGCAGACGTCTGGCTGGGCATAATGAGCGGCGTAGGAAGCCACCACCTGGGTCACTGTTGTCCACTCGTTATGGTCGCTTCTCTTCATCTATCTTTGAAAACAGCAGCAGAGTTGGAAGCTTTCTGATGGACTTCAGTGCATATCCAAAGCTGACTGGAAAGGATGTTTGGTCGTCGTCGGGTATGAAAGCATCATCCGAACGGGTGCCCGGAAATCAAGGCATCACTTCTATGGGGAAATATATCCCAAATCCTTGGCAGAGCAATCCATCTGAACTTCTCCTGCCAGTTTCTTCAGCAGGTGGAACCAGTTATTCTGGTCCTGGTAATCCTTCTGGGGAATGCATCAATGGAGTCACTGACTCATCCTGTGCTCTCTCTCTTCTGTCAAACCAAACATGGGGCTCCAGAAACCGATCGACGCCTCTCGAGGTAAATGCAGCCTTGTTGAATGCTGAAGGTGCACTTGTGGCTCAAACAACATCAGCTCATGCTGCTACCAATCACTTCCCGATGTCGATGTCGATGTCGTCGTGGAGTTTCAAGGGAAATGAAGCTCCTGCTAGCATCTCCCTGGACCTGGCATCTGACTTGGGTCTGAATCATCAAGTTTCACAGGCTCTTACTACCAGTTCTTTCTCTGGTGATGTCCAGTTTCCTAATCAAGGTAGTAGGAGGCCATACATGGAACTTGGGCAATCAGCAGGTGCCTTCGACTCAACCCAGCAGCATCTGCACTGGTCACTTTGAGGTGCTGCTGCACTTCAGCTCTCTGGTTCCAGTGAAATCCACTCCTCTTTTAGGCCTTTTCAAATGAATAATTGGCTCGAGACATCGAACTCATTGTCTACTTCATTCCCCCCCTGGTTGGGTTTGTTGAAAACTATTGTTCCTTTTGTGTTTTATGAACTACATCAGGAAGACTTGAGACCTGAACTCTTTCCCTTTTGACATTTTACTATGGAACCGTCTGGTGCTTGTGTGTTT

Coding sequence (CDS)

ATGGAAATGGATTGCAGCTCTTTGACTGAGTCTGGTGGGTCTTCCACTTCCTCGCCGCCCAATTCATCAGCCGAATCCCTCAATGGCCTCAAATTTGGACACAAAATTTACTTTGAAGATGTGGGTATTGGAGAGCTTCCTAAATCAGGTGGGGGAGGATCTTTCTCATCCTCGCCTCTTATTGCATCAACACCCACCAAGAAGCTTAGGGGAGGCGTTGTTCAGCCGGCTCAGCCCCCTAGGTGTCAGGTTGAAGGCTGTAAAGTAGATCTAAGTGATGTTAAGGCTTACTATTCCAGACACAAAGTTTGTACTATGCACTCCAAATCCCCCAAGGTCATTGTTGCTGGTCTTGAGCAAAGGTTTTGCCAACAGTGTAGCAGATTTCATCAGCTTCCTGAATTTGATCAAGGAAAACGTAGCTGCCGCAGACGTCTGGCTGGGCATAATGAGCGGCGTAGGAAGCCACCACCTGGGTCACTGTTGTCCACTCGTTATGGTCGCTTCTCTTCATCTATCTTTGAAAACAGCAGCAGAGTTGGAAGCTTTCTGATGGACTTCAGTGCATATCCAAAGCTGACTGGAAAGGATGTTTGGTCGTCGTCGGGTATGAAAGCATCATCCGAACGGGTGCCCGGAAATCAAGGCATCACTTCTATGGGGAAATATATCCCAAATCCTTGGCAGAGCAATCCATCTGAACTTCTCCTGCCAGTTTCTTCAGCAGGTGGAACCAGTTATTCTGGTCCTGGTAATCCTTCTGGGGAATGCATCAATGGAGTCACTGACTCATCCTGTGCTCTCTCTCTTCTGTCAAACCAAACATGGGGCTCCAGAAACCGATCGACGCCTCTCGAGGTAAATGCAGCCTTGTTGAATGCTGAAGGTGCACTTGTGGCTCAAACAACATCAGCTCATGCTGCTACCAATCACTTCCCGATGTCGATGTCGATGTCGTCGTGGAGTTTCAAGGGAAATGAAGCTCCTGCTAGCATCTCCCTGGACCTGGCATCTGACTTGGGTCTGAATCATCAAGTTTCACAGGCTCTTACTACCAGTTCTTTCTCTGGTGATGTCCAGTTTCCTAATCAAGGTAGTAGGAGGCCATACATGGAACTTGGGCAATCAGCAGGTGCCTTCGACTCAACCCAGCAGCATCTGCACTGGTCACTTTGA

Protein sequence

MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPLIASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIFENSSRVGSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPVSSAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAEGALVAQTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSFSGDVQFPNQGSRRPYMELGQSAGAFDSTQQHLHWSL

Homology

[Close]

BLAST of Carg03561-RA vs. NCBI nr
Match: XP_022935374.1 (squamosa promoter-binding-like protein 17 isoform X1 [Cucurbita moschata])

HSP 1 Score: 756.9 bits (1953), Expect = 3.4e-215
Identity = 390/391 (99.74%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60
           MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL
Sbjct: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60

Query: 61  IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ 120
           IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ
Sbjct: 61  IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ 120

Query: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRV 180
           RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRV
Sbjct: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRV 180

Query: 181 GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPVS 240
           GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPVS
Sbjct: 181 GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPVS 240

Query: 241 SAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAEGALVA 300
           SAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAEGALVA
Sbjct: 241 SAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAEGALVA 300

Query: 301 QTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSFSGDVQ 360
           QTTSAHAATNHFPMSMSMSSWSFKGNE+PASISLDLASDLGLNHQVSQALTTSSFSGDVQ
Sbjct: 301 QTTSAHAATNHFPMSMSMSSWSFKGNESPASISLDLASDLGLNHQVSQALTTSSFSGDVQ 360

Query: 361 FPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 392
           FPNQGSRRPYMELGQSAGAFDSTQQHLHWSL
Sbjct: 361 FPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 391

[Close]

BLAST of Carg03561-RA vs. NCBI nr
Match: XP_023527960.1 (squamosa promoter-binding-like protein 17 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 756.9 bits (1953), Expect = 3.4e-215
Identity = 390/391 (99.74%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60
           MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL
Sbjct: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60

Query: 61  IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ 120
           IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ
Sbjct: 61  IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ 120

Query: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRV 180
           RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRV
Sbjct: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRV 180

Query: 181 GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPVS 240
           GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPVS
Sbjct: 181 GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPVS 240

Query: 241 SAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAEGALVA 300
           SAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNR+TPLEVNAALLNAEGALVA
Sbjct: 241 SAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRTTPLEVNAALLNAEGALVA 300

Query: 301 QTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSFSGDVQ 360
           QTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSFSGDVQ
Sbjct: 301 QTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSFSGDVQ 360

Query: 361 FPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 392
           FPNQGSRRPYMELGQSAGAFDSTQQHLHWSL
Sbjct: 361 FPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 391

[Close]

BLAST of Carg03561-RA vs. NCBI nr
Match: XP_022982984.1 (squamosa promoter-binding-like protein 17 isoform X1 [Cucurbita maxima])

HSP 1 Score: 739.6 bits (1908), Expect = 5.6e-210
Identity = 386/392 (98.47%), Postives = 388/392 (98.98%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60
           MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL
Sbjct: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60

Query: 61  IASTPTKKLR-GGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLE 120
           IASTPTKKLR GGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLE
Sbjct: 61  IASTPTKKLRGGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLE 120

Query: 121 QRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSR 180
           QRFCQQCSRFHQLPEFDQGKRSCRRRLAGH XXXXXXXX +LLSTRYGRFSSSIFENSSR
Sbjct: 121 QRFCQQCSRFHQLPEFDQGKRSCRRRLAGHXXXXXXXXXXALLSTRYGRFSSSIFENSSR 180

Query: 181 VGSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPV 240
           VGSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPV
Sbjct: 181 VGSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPV 240

Query: 241 SSAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAEGALV 300
           SS GGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNR+TPLEVNAALLNAEGALV
Sbjct: 241 SS-GGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRTTPLEVNAALLNAEGALV 300

Query: 301 AQTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSFSGDV 360
           AQTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSFSGDV
Sbjct: 301 AQTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSFSGDV 360

Query: 361 QFPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 392
           QFPNQGSRRPYMELGQSAGAFDSTQQHLHWSL
Sbjct: 361 QFPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 391

[Close]

BLAST of Carg03561-RA vs. NCBI nr
Match: XP_022935375.1 (squamosa promoter-binding-like protein 17 isoform X2 [Cucurbita moschata])

HSP 1 Score: 729.9 bits (1883), Expect = 4.4e-207
Identity = 380/391 (97.19%), Postives = 381/391 (97.44%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60
           MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL
Sbjct: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60

Query: 61  IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ 120
           IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ
Sbjct: 61  IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ 120

Query: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRV 180
           RFCQQCSRFHQLPEFDQGKRSCRRRLAGH XXXXXXXX SLLSTRY        ENSSRV
Sbjct: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHXXXXXXXXXXSLLSTRY--------ENSSRV 180

Query: 181 GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPVS 240
           GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPVS
Sbjct: 181 GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPVS 240

Query: 241 SAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAEGALVA 300
           SAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAEGALVA
Sbjct: 241 SAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAEGALVA 300

Query: 301 QTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSFSGDVQ 360
           QTTSAHAATNHFPMSMSMSSWSFKGNE+PASISLDLASDLGLNHQVSQALTTSSFSGDVQ
Sbjct: 301 QTTSAHAATNHFPMSMSMSSWSFKGNESPASISLDLASDLGLNHQVSQALTTSSFSGDVQ 360

Query: 361 FPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 392
           FPNQGSRRPYMELGQSAGAFDSTQQHLHWSL
Sbjct: 361 FPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 383

[Close]

BLAST of Carg03561-RA vs. NCBI nr
Match: XP_023527962.1 (squamosa promoter-binding-like protein 17 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 729.9 bits (1883), Expect = 4.4e-207
Identity = 380/391 (97.19%), Postives = 381/391 (97.44%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60
           MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL
Sbjct: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60

Query: 61  IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ 120
           IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ
Sbjct: 61  IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ 120

Query: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRV 180
           RFCQQCSRFHQLPEFDQGKRSCRRRLAGH XXXXXXXX SLLSTRY        ENSSRV
Sbjct: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHXXXXXXXXXXSLLSTRY--------ENSSRV 180

Query: 181 GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPVS 240
           GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPVS
Sbjct: 181 GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPVS 240

Query: 241 SAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAEGALVA 300
           SAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNR+TPLEVNAALLNAEGALVA
Sbjct: 241 SAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRTTPLEVNAALLNAEGALVA 300

Query: 301 QTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSFSGDVQ 360
           QTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSFSGDVQ
Sbjct: 301 QTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSFSGDVQ 360

Query: 361 FPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 392
           FPNQGSRRPYMELGQSAGAFDSTQQHLHWSL
Sbjct: 361 FPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 383

[Close]

BLAST of Carg03561-RA vs. TAIR10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9)

HSP 1 Score: 167.2 bits (422), Expect = 2.1e-41
Identity = 130/338 (38.46%), Postives = 166/338 (49.11%), Query Frame = 0


Query: 75  QPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPE 134
           Q  Q PRCQVEGC +DL++ K YYSRH+VC +HSK+PKV VAG+EQRFCQQCSRFHQLPE
Sbjct: 67  QSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPE 126

Query: 135 FDQGKRSCRRRLAGHNXXXXXXXXGSL--LSTRYGRFSSSIFEN--SSRVGSFLMDFSAY 194
           FD  KRSCRRRLAGHN         SL  L++RYGR + S++EN  +   GSFL +    
Sbjct: 127 FDLEKRSCRRRLAGHNERRRKPQPASLSVLASRYGRIAPSLYENGDAGMNGSFLGN---- 186

Query: 195 PKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNP-WQSNPSELLLPVS-SAGGTSYS 254
                +  W SS  +    RV        M + + +P WQ NP  +    S   GGTS+S
Sbjct: 187 ----QEIGWPSS--RTLDTRV--------MRRPVSSPSWQINPMNVFSQGSVGGGGTSFS 246

Query: 255 GPG--NPSGECINGVTDSSCALSLLSN------------QTWGSRNRSTPLEVNAALLNA 314
            P   +   E   G+ DS+CALSLLSN                              +  
Sbjct: 247 SPEIMDTKLESYKGIGDSNCALSLLSNPHQXXXXXXXXXXXXXXXXXXXXXXXXXGPMTX 306

Query: 315 EGALVAQTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGL-NHQVSQALTTS 374
                    S H   N          W FK N+   S  L+L       N Q+S      
Sbjct: 307 XXXXXXXXXSQHQYLN--------PPWVFKDNDNDMSPVLNLGRYTEPDNCQISSGTAMG 366

Query: 375 SFSGDVQFPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 392
            F  ++   +  SRR YME  ++  A+DS+  H +WSL
Sbjct: 367 EF--ELSDHHHQSRRQYME-DENTRAYDSSSHHTNWSL 375

[Close]

BLAST of Carg03561-RA vs. TAIR10
Match: AT3G57920.1 (squamosa promoter binding protein-like 15)

HSP 1 Score: 162.9 bits (411), Expect = 3.9e-40
Identity = 146/406 (35.96%), Postives = 195/406 (48.03%), Query Frame = 0


Query: 5   CSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPLIAST 64
           CS   ESGGSS++     S+    GL+FG KIYFED          G GS S        
Sbjct: 6   CSGQAESGGSSST----ESSSLSGGLRFGQKIYFED----------GSGSRS-------- 65

Query: 65  PTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQ 124
             K     V + +   RCQVEGC++DLS+VKAYYSRHKVC +HSKS KVIV+GL QRFCQ
Sbjct: 66  --KNRVNTVRKSSTTARCQVEGCRMDLSNVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQ 125

Query: 125 QCSRFHQLPEFDQGKRSCRRRLAGHN-XXXXXXXXGSLLSTRYGRFSSSIF--ENSSRVG 184
           QCSRFHQL EFD  KRSCRRRLA HN          +L ++ Y R + S++   N++ + 
Sbjct: 126 QCSRFHQLSEFDLEKRSCRRRLACHNERRRKPQPTTALFTSHYSRIAPSLYGNPNAAMIK 185

Query: 185 SFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLP--- 244
           S L D +A         WS++  ++  +R              P PWQ NP     P   
Sbjct: 186 SVLGDPTA---------WSTA--RSVMQR--------------PGPWQINPVRETHPHMN 245

Query: 245 VSSAGGTSYSGPGNPSGECI-NGVTDSSCALSLLSNQ-TWGSRNRSTPLEV-------NA 304
           V S G +S++       E I N  TDSSCALSLLSN      +   TP          ++
Sbjct: 246 VLSHGSSSFT----TCPEMINNNSTDSSCALSLLSNSYPIHQQQLQTPTNTWRPSSGFDS 305

Query: 305 ALLNAEGALVAQ--TTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLG--LNHQ 364
            +  ++   +AQ    S               +W     E   S  +   S +    + Q
Sbjct: 306 MISFSDKVTMAQPPPISTXXXXXXXXXXXXXXTWEVIAGEKSNSHYMSPVSQISEPADFQ 354

Query: 365 VSQALTTSSFSGDVQFPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 392
           +S   T   F     + +Q   + YME  ++  A+DS+ QH +WSL
Sbjct: 366 ISNGTTMGGFE---LYLHQQVLKQYME-PENTRAYDSSPQHFNWSL 354

[Close]

BLAST of Carg03561-RA vs. TAIR10
Match: AT5G43270.2 (squamosa promoter binding protein-like 2)

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-29
Identity = 64/128 (50.00%), Postives = 85/128 (66.41%), Query Frame = 0


Query: 23  SAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPLIASTPTKKLRGGVVQPAQPPRC 82
           S + + GLK G + YFED    E+  + G G   +    + +P KK +  + Q  Q P C
Sbjct: 113 SGDPVLGLKLGKRTYFED--FWEVENAKGLGLPVTLASSSVSPVKKSK-SIPQRLQTPHC 172

Query: 83  QVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSC 142
           QVEGC +DLS  K Y+ +H++C  HSK PKV+V+G+E+RFCQQCSRFH L EFD+ KRSC
Sbjct: 173 QVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRSC 232

Query: 143 RRRLAGHN 151
           RRRL+ HN
Sbjct: 233 RRRLSDHN 237

[Close]

BLAST of Carg03561-RA vs. TAIR10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10)

HSP 1 Score: 117.5 bits (293), Expect = 1.9e-26
Identity = 94/286 (32.87%), Postives = 136/286 (47.55%), Query Frame = 0


Query: 14  SSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPLIASTPTKKLRGGV 73
           S+    P +SAES   LK G + Y E+   G    +    + S + L  S   +K     
Sbjct: 111 STALEVPIASAESDLCLKLGKRTYSEEFW-GR--NNNDLSAVSMNLLTPSVVARKKTKSC 170

Query: 74  VQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLP 133
            Q  Q PRCQ++GC++DLS  K Y+ +H+VC  HSK PKV+V+GLE+RFCQQCSRFH + 
Sbjct: 171 GQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVS 230

Query: 134 EFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRVGSFLMDFSAYPKL 193
           EFD+ KRSCR+RL+ HN           L+      S  +F+            S   + 
Sbjct: 231 EFDEKKRSCRKRLSHHNARRRKPQGVFPLN------SERVFDRRQHTSMLWNGLSLNTRS 290

Query: 194 TGKDVWSS----------SGMKASSERVPGNQGITSMGKYIP-NPWQSNPSELLLPVSSA 253
             K  W +          SG   S +R  G++     G  +  + +Q++         SA
Sbjct: 291 EEKYTWGTTYETKPTQMESGFTLSFQRGNGSEDQLFTGSTLSFSAFQTSGG------FSA 350

Query: 254 GGTSYSGPGNPSGECINGVTDSS---CALSLLSNQTWGSRNRSTPL 286
           G ++   P    GEC  G+ +S     ALSLLS  +     + TP+
Sbjct: 351 GKSNIQLPDKGVGECSGGLHESHDFYSALSLLSTTSDSQGIKHTPV 381

[Close]

BLAST of Carg03561-RA vs. TAIR10
Match: AT2G47070.1 (squamosa promoter binding protein-like 1)

HSP 1 Score: 116.3 bits (290), Expect = 4.2e-26
Identity = 55/86 (63.95%), Postives = 61/86 (70.93%), Query Frame = 0


Query: 65  PTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQ 124
           P KK + G V       CQVE C+ DLS VK Y+ RHKVC MHSK+    V G+ QRFCQ
Sbjct: 96  PAKKTKSGAV-------CQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQ 155

Query: 125 QCSRFHQLPEFDQGKRSCRRRLAGHN 151
           QCSRFH L EFD+GKRSCRRRLAGHN
Sbjct: 156 QCSRFHLLQEFDEGKRSCRRRLAGHN 174

[Close]

BLAST of Carg03561-RA vs. Swiss-Prot
Match: sp|A3C057|SPL17_ORYSJ (Squamosa promoter-binding-like protein 17 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL17 PE=2 SV=2)

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-49
Identity = 141/332 (42.47%), Postives = 186/332 (56.02%), Query Frame = 0


Query: 81  RCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKR 140
           RCQVEGC VDLS VK YY RHKVC MH+K P V+VAGLEQRFCQQCSRFHQLPEFDQ K+
Sbjct: 73  RCQVEGCGVDLSGVKPYYCRHKVCYMHAKEPIVVVAGLEQRFCQQCSRFHQLPEFDQEKK 132

Query: 141 SCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRVGSFLMDFSAYPKLTG--KDV 200
           SCRRRLAGHN        G  LS+RYGR ++S  E   R  SF++DFS YP++    +D 
Sbjct: 133 SCRRRLAGHNERRRKPTPGP-LSSRYGRLAASFHEEPGRSRSFVVDFS-YPRVPSSVRDA 192

Query: 201 WSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELL--LPVSSAGGTSYSGP--GNP- 260
           W +      S+R+ G+  I   G +  +P +S  +        SS GG++   P   +P 
Sbjct: 193 WPAI---QPSDRMSGS--IQWQGGHELHPHRSAVAGYSDHHAFSSHGGSAAGAPMLHHPA 252

Query: 261 ----SGECINGV-TDSSCALSLLSNQTW------GSRNRSTPLEVNAALLNAEGALVAQT 320
               SG C+ GV TDSSCALSLLS Q W       S NRS P+   A+        V+ +
Sbjct: 253 FELTSGGCLAGVATDSSCALSLLSTQPWDTTQSTSSHNRSPPMSSTASAFGGGNNPVSPS 312

Query: 321 TSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSFSGDVQFP 380
                A+N+   S   +S S +G++   ++ L     + LN     ++    FSG+++  
Sbjct: 313 V---MASNYMAASPGWNS-SSRGHDGARNVHLPPPHGVVLNEVPPGSVHHGHFSGELELA 372

Query: 381 NQG---SRRPYMELGQSAGAFDSTQQHLHWSL 392
            QG   S RP  E G  +GAF  +   ++WSL
Sbjct: 373 LQGGAPSNRPEAEHGSGSGAFSHSTNAMNWSL 393

[Close]

BLAST of Carg03561-RA vs. Swiss-Prot
Match: sp|Q7EXZ2|SPL14_ORYSJ (Squamosa promoter-binding-like protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL14 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 8.1e-43
Identity = 130/332 (39.16%), Postives = 178/332 (53.61%), Query Frame = 0


Query: 82  CQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRS 141
           CQVEGC  DLS +K YY RHKVC MHSK+P+V+VAGLEQRFCQQCSRFH LPEFDQGKRS
Sbjct: 104 CQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRS 163

Query: 142 CRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRVGSFLMDFSAYPKLTG--KDVW 201
           CRRRLAGHN         + L++RYGR ++S+ E+  R  SF +DFS YP++    ++ W
Sbjct: 164 CRRRLAGHNERRRRPQ--TPLASRYGRLAASVGEH-RRFRSFTLDFS-YPRVPSSVRNAW 223

Query: 202 SS-------SGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPVSSAGGTSYSGPGN 261
            +       SG       V  +   +++  Y  N +    S      SS+G   ++GP  
Sbjct: 224 PAIQPGDRISGGIQWHRNVAPHGHSSAVAGYGANTYSGQGS------SSSGPPVFAGPNL 283

Query: 262 PSGECINGV---TDSSCALSLLSNQTWGSRNRS-----TPLEVNAALLNAEGALVAQTTS 321
           P G C+ GV   TDSSCALSLLS Q W +   S               + +G  VA +  
Sbjct: 284 PPGGCLAGVGAATDSSCALSLLSTQPWDTTTHSXXXXXXXXXXXXXXTSFDGNPVAPSAM 343

Query: 322 AHAATNHFPMSMSMSSWS-FKGNEAPA-SISLDLASDLGLNHQVSQALTTSSFSGDVQFP 381
           A +        M+ S W+  +G+E    S++  L  ++ L+         + FSG+++  
Sbjct: 344 AGS-------YMAPSPWTGSRGHEGGGRSVAHQLPHEVSLDEVHPGPSHHAHFSGELELA 403

Query: 382 NQG---SRRPYMELGQSAGAFDSTQQHLHWSL 392
            QG   +  P ++ G S   FD T   + WSL
Sbjct: 404 LQGNGPAPAPRIDPG-SGSTFDQTSNTMDWSL 417

[Close]

BLAST of Carg03561-RA vs. Swiss-Prot
Match: sp|Q700W2|SPL9_ARATH (Squamosa promoter-binding-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=SPL9 PE=2 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 3.7e-40
Identity = 130/338 (38.46%), Postives = 166/338 (49.11%), Query Frame = 0


Query: 75  QPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPE 134
           Q  Q PRCQVEGC +DL++ K YYSRH+VC +HSK+PKV VAG+EQRFCQQCSRFHQLPE
Sbjct: 67  QSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPE 126

Query: 135 FDQGKRSCRRRLAGHNXXXXXXXXGSL--LSTRYGRFSSSIFEN--SSRVGSFLMDFSAY 194
           FD  KRSCRRRLAGHN         SL  L++RYGR + S++EN  +   GSFL +    
Sbjct: 127 FDLEKRSCRRRLAGHNERRRKPQPASLSVLASRYGRIAPSLYENGDAGMNGSFLGN---- 186

Query: 195 PKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNP-WQSNPSELLLPVS-SAGGTSYS 254
                +  W SS  +    RV        M + + +P WQ NP  +    S   GGTS+S
Sbjct: 187 ----QEIGWPSS--RTLDTRV--------MRRPVSSPSWQINPMNVFSQGSVGGGGTSFS 246

Query: 255 GPG--NPSGECINGVTDSSCALSLLSN------------QTWGSRNRSTPLEVNAALLNA 314
            P   +   E   G+ DS+CALSLLSN                              +  
Sbjct: 247 SPEIMDTKLESYKGIGDSNCALSLLSNPHQXXXXXXXXXXXXXXXXXXXXXXXXXGPMTX 306

Query: 315 EGALVAQTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGL-NHQVSQALTTS 374
                    S H   N          W FK N+   S  L+L       N Q+S      
Sbjct: 307 XXXXXXXXXSQHQYLN--------PPWVFKDNDNDMSPVLNLGRYTEPDNCQISSGTAMG 366

Query: 375 SFSGDVQFPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 392
            F  ++   +  SRR YME  ++  A+DS+  H +WSL
Sbjct: 367 EF--ELSDHHHQSRRQYME-DENTRAYDSSSHHTNWSL 375

[Close]

BLAST of Carg03561-RA vs. Swiss-Prot
Match: sp|Q9M2Q6|SPL15_ARATH (Squamosa promoter-binding-like protein 15 OS=Arabidopsis thaliana OX=3702 GN=SPL15 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 7.1e-39
Identity = 146/406 (35.96%), Postives = 195/406 (48.03%), Query Frame = 0


Query: 5   CSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPLIAST 64
           CS   ESGGSS++     S+    GL+FG KIYFED          G GS S        
Sbjct: 6   CSGQAESGGSSST----ESSSLSGGLRFGQKIYFED----------GSGSRS-------- 65

Query: 65  PTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQ 124
             K     V + +   RCQVEGC++DLS+VKAYYSRHKVC +HSKS KVIV+GL QRFCQ
Sbjct: 66  --KNRVNTVRKSSTTARCQVEGCRMDLSNVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQ 125

Query: 125 QCSRFHQLPEFDQGKRSCRRRLAGHN-XXXXXXXXGSLLSTRYGRFSSSIF--ENSSRVG 184
           QCSRFHQL EFD  KRSCRRRLA HN          +L ++ Y R + S++   N++ + 
Sbjct: 126 QCSRFHQLSEFDLEKRSCRRRLACHNERRRKPQPTTALFTSHYSRIAPSLYGNPNAAMIK 185

Query: 185 SFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLP--- 244
           S L D +A         WS++  ++  +R              P PWQ NP     P   
Sbjct: 186 SVLGDPTA---------WSTA--RSVMQR--------------PGPWQINPVRETHPHMN 245

Query: 245 VSSAGGTSYSGPGNPSGECI-NGVTDSSCALSLLSNQ-TWGSRNRSTPLEV-------NA 304
           V S G +S++       E I N  TDSSCALSLLSN      +   TP          ++
Sbjct: 246 VLSHGSSSFT----TCPEMINNNSTDSSCALSLLSNSYPIHQQQLQTPTNTWRPSSGFDS 305

Query: 305 ALLNAEGALVAQ--TTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLG--LNHQ 364
            +  ++   +AQ    S               +W     E   S  +   S +    + Q
Sbjct: 306 MISFSDKVTMAQPPPISTXXXXXXXXXXXXXXTWEVIAGEKSNSHYMSPVSQISEPADFQ 354

Query: 365 VSQALTTSSFSGDVQFPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 392
           +S   T   F     + +Q   + YME  ++  A+DS+ QH +WSL
Sbjct: 366 ISNGTTMGGFE---LYLHQQVLKQYME-PENTRAYDSSPQHFNWSL 354

[Close]

BLAST of Carg03561-RA vs. Swiss-Prot
Match: sp|A2YGR5|SPL12_ORYSI (Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica OX=39946 GN=SPL12 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.6e-30
Identity = 103/310 (33.23%), Postives = 147/310 (47.42%), Query Frame = 0


Query: 22  SSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPLIASTPTKKLRGGVVQPAQPPR 81
           S  E + GLK G + YFE+V  G+  KS    S  + P   ST  KK++    Q  Q   
Sbjct: 124 SHGEPVIGLKLGKRTYFENVCGGQNVKSSSAASGVTCP---STVVKKMKVS-QQSTQSSY 183

Query: 82  CQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRS 141
           CQVEGCKVDLS  + Y+ +HKVC  HSK+PKVIV+GLE+RFCQQCSRFH L EFDQ K+S
Sbjct: 184 CQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKS 243

Query: 142 CRRRLAGHN------XXXXXXXXGSLLSTR----------------YGRFSSSIFENSSR 201
           CRRRL+ HN               S L+T                 +G+  S+   +   
Sbjct: 244 CRRRLSDHNARRRKPQQEAISFGSSRLATMFYDARQQTDIYFGQSPFGQVRSNAISSCDN 303

Query: 202 VGSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPSELLLPV 261
           +G F    +  P +          +  S+ ++PGN         + +    +  + L+P 
Sbjct: 304 LGGFKFTEAKLPWMKPMKTIGLEDLNFSTLQMPGN--------VVSHTVHHHDFDGLIPF 363

Query: 262 SSAGGTSYSGPGNPSGECI----NGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAE 306
                   +   +P+   +    NG  D   ALSLLS+ +WG  +     +V+   +   
Sbjct: 364 KGNTTKVLNQGVDPACAVVSSNSNGAPDLRRALSLLSSDSWGPADVQAGSQVHPGGVMPP 421

[Close]

BLAST of Carg03561-RA vs. TrEMBL
Match: tr|A0A0A0LBC1|A0A0A0LBC1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809420 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 9.5e-166
Identity = 334/396 (84.34%), Postives = 350/396 (88.38%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60
           MEMDCSSLTESGGSS SSPPNSSAESLNGLKFG KIYFEDVGIGELPKS GGGSFSSS +
Sbjct: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKS-GGGSFSSSAV 60

Query: 61  IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ 120
           IASTPTKK RGGVVQ AQPPRCQVEGC+VDL+D KAYYSRHKVCTMHSKSPKVIVAGLEQ
Sbjct: 61  IASTPTKKPRGGVVQAAQPPRCQVEGCRVDLTDAKAYYSRHKVCTMHSKSPKVIVAGLEQ 120

Query: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRV 180
           RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENS+RV
Sbjct: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSNRV 180

Query: 181 GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPS----ELL 240
           GSFLMDFSAYPKL GKDVW S+G KA SERVPGN  ++SMGKY+P+PWQSN      ELL
Sbjct: 181 GSFLMDFSAYPKLAGKDVW-STGTKA-SERVPGNPNVSSMGKYVPHPWQSNSENNQPELL 240

Query: 241 LPVSSAGGTSYSGPGNPS-GECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAE 300
           LPV SAGGTS+SGPGNPS GECIN VTDSSCALSLLSN++WGSRNR+T +EVN ALLNAE
Sbjct: 241 LPV-SAGGTSFSGPGNPSGGECINSVTDSSCALSLLSNESWGSRNRTTTIEVN-ALLNAE 300

Query: 301 GALVAQTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSF 360
           G LVAQTT A AATNHFP      SW FKGNEAP S   DL SDLGLNHQVS AL TSSF
Sbjct: 301 GTLVAQTT-ADAATNHFP----TMSWGFKGNEAPTSSFRDLTSDLGLNHQVSHAL-TSSF 360

Query: 361 SGDVQFPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 392
           SGDVQFP+  +RRPYMELG S GAFDST QHLHWSL
Sbjct: 361 SGDVQFPHL-ARRPYMELGHS-GAFDST-QHLHWSL 382

[Close]

BLAST of Carg03561-RA vs. TrEMBL
Match: tr|A0A1S3B7Z5|A0A1S3B7Z5_CUCME (squamosa promoter-binding-like protein 9 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486778 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 6.8e-164
Identity = 331/396 (83.59%), Postives = 347/396 (87.63%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60
           MEMDCSSLTESGGSS SSPPNSSAESLNGLKFG KIYFEDVGI ELPKS GGGSFSSS +
Sbjct: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIAELPKS-GGGSFSSSAV 60

Query: 61  IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ 120
           IASTPTKK RGGVV PAQPPRCQVEGC+VDL+D KAYYSRHKVCTMHSKSPKVIVAGLEQ
Sbjct: 61  IASTPTKKPRGGVVHPAQPPRCQVEGCRVDLTDAKAYYSRHKVCTMHSKSPKVIVAGLEQ 120

Query: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRV 180
           RFCQQCSRFHQLPEFDQGKRSCRRRLAGHN XXXXXXXGSLLS RYGRFSSSIFENS+RV
Sbjct: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNEXXXXXXXGSLLSPRYGRFSSSIFENSNRV 180

Query: 181 GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPS----ELL 240
           GSFLMDFSAYPKL GKDVW  SG KA SERV GN+ I S+GKY+P+PWQSN      ELL
Sbjct: 181 GSFLMDFSAYPKLAGKDVW-LSGTKA-SERVLGNRSIGSIGKYVPHPWQSNSENNQPELL 240

Query: 241 LPVSSAGGTSYSGPGNPS-GECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAE 300
           LPV SAGGTS+SGPGNPS GECIN VTDSSCALSLLSN++WGSRNR+T +EVN ALLNAE
Sbjct: 241 LPV-SAGGTSFSGPGNPSGGECINSVTDSSCALSLLSNESWGSRNRTTTVEVN-ALLNAE 300

Query: 301 GALVAQTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSF 360
           G LVAQTT+ HAATNHFP      SW FKGNEAP S  LDL SDLGLNHQVS AL TSSF
Sbjct: 301 GTLVAQTTT-HAATNHFP----TMSWGFKGNEAPPSSFLDLTSDLGLNHQVSHAL-TSSF 360

Query: 361 SGDVQFPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 392
           SGDVQFP+  +RRPYMELG S GAFDST QHLHWSL
Sbjct: 361 SGDVQFPHL-ARRPYMELGHS-GAFDST-QHLHWSL 382

[Close]

BLAST of Carg03561-RA vs. TrEMBL
Match: tr|A0A1S4DUW0|A0A1S4DUW0_CUCME (squamosa promoter-binding-like protein 9 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486778 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 7.3e-142
Identity = 301/396 (76.01%), Postives = 317/396 (80.05%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60
           MEMDCSSLTES                                 ELPKS GGGSFSSS +
Sbjct: 1   MEMDCSSLTES---------------------------------ELPKS-GGGSFSSSAV 60

Query: 61  IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ 120
           IASTPTKK RGGVV PAQPPRCQVEGC+VDL+D KAYYSRHKVCTMHSKSPKVIVAGLEQ
Sbjct: 61  IASTPTKKPRGGVVHPAQPPRCQVEGCRVDLTDAKAYYSRHKVCTMHSKSPKVIVAGLEQ 120

Query: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRV 180
           RFCQQCSRFHQLPEFDQGKRSCRRRLAGHN XXXXXXXGSLLS RYGRFSSSIFENS+RV
Sbjct: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNEXXXXXXXGSLLSPRYGRFSSSIFENSNRV 180

Query: 181 GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSNPS----ELL 240
           GSFLMDFSAYPKL GKDVW  SG KA SERV GN+ I S+GKY+P+PWQSN      ELL
Sbjct: 181 GSFLMDFSAYPKLAGKDVW-LSGTKA-SERVLGNRSIGSIGKYVPHPWQSNSENNQPELL 240

Query: 241 LPVSSAGGTSYSGPGNPS-GECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAE 300
           LPV SAGGTS+SGPGNPS GECIN VTDSSCALSLLSN++WGSRNR+T +EVN ALLNAE
Sbjct: 241 LPV-SAGGTSFSGPGNPSGGECINSVTDSSCALSLLSNESWGSRNRTTTVEVN-ALLNAE 300

Query: 301 GALVAQTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSF 360
           G LVAQTT+ HAATNHFP      SW FKGNEAP S  LDL SDLGLNHQVS AL TSSF
Sbjct: 301 GTLVAQTTT-HAATNHFP----TMSWGFKGNEAPPSSFLDLTSDLGLNHQVSHAL-TSSF 349

Query: 361 SGDVQFPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 392
           SGDVQFP+  +RRPYMELG S GAFDST QHLHWSL
Sbjct: 361 SGDVQFPHL-ARRPYMELGHS-GAFDST-QHLHWSL 349

[Close]

BLAST of Carg03561-RA vs. TrEMBL
Match: tr|M5WIB2|M5WIB2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G256300 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.2e-109
Identity = 228/397 (57.43%), Postives = 275/397 (69.27%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60
           MEM  SS+                ESLNGLKFG KIYFED G+G   KSG  GS SS   
Sbjct: 4   MEMGSSSMXXXXXXXXXXXXXXXXESLNGLKFGRKIYFEDAGLGAAYKSGSAGSSSS--- 63

Query: 61  IASTPTKKLRG-GVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLE 120
             +TP KK RG  + Q  QPPRCQVEGC+VDLSD KAYYSRHKVC +HSK+P VIVAGLE
Sbjct: 64  -GATPPKKQRGVNLAQSGQPPRCQVEGCQVDLSDAKAYYSRHKVCGLHSKTPMVIVAGLE 123

Query: 121 QRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSR 180
           QRFCQQCSRFHQLPEFDQGKRSCRRRLAGHN        GS+LS R+GR SSSI+ENSSR
Sbjct: 124 QRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPQPGSILSARFGRLSSSIYENSSR 183

Query: 181 VGSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQSN----PSEL 240
           VGSFLMDF+AYP+L+G+D W+++    +SERVPGNQ     GK++ +PWQSN    PS L
Sbjct: 184 VGSFLMDFTAYPRLSGRDAWATT---RTSERVPGNQNSNDTGKFLQHPWQSNSEITPSGL 243

Query: 241 LLPVSSAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAE 300
            L   SAG ++Y GPG P GEC+ GVTDSSCALSLLS+Q WGSRNR + + +N  ++N +
Sbjct: 244 YLQ-GSAGRSNYPGPGIPPGECVTGVTDSSCALSLLSSQPWGSRNRVSGVGMN-TVINTQ 303

Query: 301 GALVAQTTSAHAATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSF 360
           G  V Q  +     NHFP     +SW FKGNEA +S S ++  DLGL  Q+SQ   ++ +
Sbjct: 304 GPPVGQPITHAGTANHFP----TTSWGFKGNEAGSS-SHEMLPDLGLG-QISQPPLSTQY 363

Query: 361 SGDVQFPNQGSRR-PYMELGQSAGAFDSTQQHLHWSL 392
           SG ++   Q SRR   MELG + G +D++ QH+HWSL
Sbjct: 364 SGVLELSQQSSRRQQQMELGHTRG-YDTSSQHIHWSL 384

[Close]

BLAST of Carg03561-RA vs. TrEMBL
Match: tr|A0A2I4GI99|A0A2I4GI99_9ROSI (squamosa promoter-binding-like protein 9 isoform X1 OS=Juglans regia OX=51240 GN=LOC109008101 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.2e-105
Identity = 243/395 (61.52%), Postives = 275/395 (69.62%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60
           MEM  SSL +SGGSS++SPP SS+ESLNGLKFG KIYFED G G   K  G         
Sbjct: 1   MEMGSSSLADSGGSSSASPPISSSESLNGLKFGQKIYFEDAGPGAPTKQSGATGXXXXXX 60

Query: 61  IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ 120
                 +   GGV+Q  QPPRCQVEGCK DLSD KAYYSRHKVC MHSKSPKVIVAGLEQ
Sbjct: 61  XXXXXVR--GGGVLQGVQPPRCQVEGCKADLSDSKAYYSRHKVCGMHSKSPKVIVAGLEQ 120

Query: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNXXXXXXXXGSLLSTRYGRFSSSIFENSSRV 180
           RFCQQCSRFH+LPEFDQGKRSCRRRLAGHNXXXXXXXXGS LS RYGR SSSIF NS R 
Sbjct: 121 RFCQQCSRFHRLPEFDQGKRSCRRRLAGHNXXXXXXXXGSSLSLRYGRLSSSIFGNSGR- 180

Query: 181 GSFLMDFSAYPKLTGKDVWSSSGMKASSERVPGNQGITSMGKYIPNPWQ---SNPSELLL 240
           G FLMDF+AYP+LTG+D W ++    SSE+VPGNQ  TS GK +P+PWQ    NP   L 
Sbjct: 181 GGFLMDFTAYPRLTGRDAWLTT---RSSEQVPGNQTTTSPGKSLPHPWQRDTENPPSDLY 240

Query: 241 PVSSAGGTSYSGPGNPSGECINGVTDSSCALSLLSNQTWGSRNRSTPLEVNAALLNAEGA 300
              SA    Y GP    GEC  GV DSSCALSLLSNQTW SR++++ L V    LNAE A
Sbjct: 241 LQGSAREVCYPGPRIGPGECFTGVFDSSCALSLLSNQTWVSRSQTSGLGVKD--LNAERA 300

Query: 301 LVAQTTSAH-AATNHFPMSMSMSSWSFKGNEAPASISLDLASDLGLNHQVSQALTTSSFS 360
            +AQ T+ H    N F    S SSW  KGNEA  S S ++  D GLNH +SQ L    F+
Sbjct: 301 PMAQPTAPHGTVVNQF----SSSSWGLKGNEAGGS-SHEMPPDTGLNH-ISQPL-NGQFA 360

Query: 361 GDVQFPNQGSRRPYMELGQSAGAFDSTQQHLHWSL 392
           G+++ P+Q  RR YME+  S  A+DS+ QHLHWSL
Sbjct: 361 GELE-PSQ-QRRQYMEIEHSR-AYDSSPQHLHWSL 377

The following BLAST results are available for this feature:

BLAST of Carg03561-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935374.1	3.4e-215	99.74	squamosa promoter-binding-like protein 17 isoform X1 [Cucurbita moschata]	[more]
XP_023527960.1	3.4e-215	99.74	squamosa promoter-binding-like protein 17 isoform X1 [Cucurbita pepo subsp. pepo...	[more]
XP_022982984.1	5.6e-210	98.47	squamosa promoter-binding-like protein 17 isoform X1 [Cucurbita maxima]	[more]
XP_022935375.1	4.4e-207	97.19	squamosa promoter-binding-like protein 17 isoform X2 [Cucurbita moschata]	[more]
XP_023527962.1	4.4e-207	97.19	squamosa promoter-binding-like protein 17 isoform X2 [Cucurbita pepo subsp. pepo...	[more]

BLAST of Carg03561-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42200.1	2.1e-41	38.46	squamosa promoter binding protein-like 9	[more]
AT3G57920.1	3.9e-40	35.96	squamosa promoter binding protein-like 15	[more]
AT5G43270.2	2.4e-29	50.00	squamosa promoter binding protein-like 2	[more]
AT1G27370.1	1.9e-26	32.87	squamosa promoter binding protein-like 10	[more]
AT2G47070.1	4.2e-26	63.95	squamosa promoter binding protein-like 1	[more]

BLAST of Carg03561-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A3C057\|SPL17_ORYSJ	1.2e-49	42.47	Squamosa promoter-binding-like protein 17 OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|Q7EXZ2\|SPL14_ORYSJ	8.1e-43	39.16	Squamosa promoter-binding-like protein 14 OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|Q700W2\|SPL9_ARATH	3.7e-40	38.46	Squamosa promoter-binding-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=SPL9...	[more]
sp\|Q9M2Q6\|SPL15_ARATH	7.1e-39	35.96	Squamosa promoter-binding-like protein 15 OS=Arabidopsis thaliana OX=3702 GN=SPL...	[more]
sp\|A2YGR5\|SPL12_ORYSI	1.6e-30	33.23	Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica OX=39946...	[more]

BLAST of Carg03561-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LBC1\|A0A0A0LBC1_CUCSA	9.5e-166	84.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809420 PE=4 SV=1	[more]
tr\|A0A1S3B7Z5\|A0A1S3B7Z5_CUCME	6.8e-164	83.59	squamosa promoter-binding-like protein 9 isoform X1 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A1S4DUW0\|A0A1S4DUW0_CUCME	7.3e-142	76.01	squamosa promoter-binding-like protein 9 isoform X2 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|M5WIB2\|M5WIB2_PRUPE	2.2e-109	57.43	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G256300 PE=4 SV=1	[more]
tr\|A0A2I4GI99\|A0A2I4GI99_9ROSI	7.2e-105	61.52	squamosa promoter-binding-like protein 9 isoform X1 OS=Juglans regia OX=51240 GN...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036893	SBP_sf
IPR004333	SBP_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg03561	Carg03561	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg03561-RA	Carg03561-RA-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03561-RA.three_prime_UTR.1	Carg03561-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03561-RA.CDS.3	Carg03561-RA.CDS.3	CDS
Carg03561-RA.CDS.2	Carg03561-RA.CDS.2	CDS
Carg03561-RA.CDS.1	Carg03561-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03561-RA.five_prime_UTR.1	Carg03561-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03561-RA.exon.3	Carg03561-RA.exon.3	exon
Carg03561-RA.exon.2	Carg03561-RA.exon.2	exon
Carg03561-RA.exon.1	Carg03561-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 82..155 e-value: 1.2E-32 score: 111.8
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 79..156 score: 32.539
IPR036893	SBP domain superfamily	GENE3D	G3DSA:4.10.1100.10		coord: 73..143 e-value: 1.5E-34 score: 119.8
IPR036893	SBP domain superfamily	SUPERFAMILY	SSF103612	SBT domain	coord: 80..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..164
None	No IPR available	PANTHER	PTHR31251	FAMILY NOT NAMED	coord: 6..379
None	No IPR available	PANTHER	PTHR31251:SF56	SUBFAMILY NOT NAMED	coord: 6..379