Carg02997-RA (mRNA) Silver-seed gourd

NameCarg02997-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_008 : 1242122 .. 1244497 (+)
Sequence length665
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCGGCCGAGGCGATCAAGACGACTGAGGATCTTGCGAGGAATGTGTAATGTTGTATCATTCCGATTCCTTGATTTTCTGTTTGTTTTTTAACGTACATTTTAGTGTATTGTTTTTCCGTCTTTCAATTACGTTACGAGGAGTAGCATTGCGCGGAAATTTTCCATTTCGCGAAGCAGCGTCGCGACATCGTCTTGAAAATTTTCTTTCGTTTGTCAATGTTTCCGGTTATGGTCCGTTGATGTAGTATCATTAATGAAACAGTATACAGTCCGAGTTAGCAGTGTGTTAGAACCACTACTTTCATATTTTCGAACTCTGTTTCACGATTATTTCTTTTTCCTTTTTGTTTGACCATTGAACACAGGGCACAGTGTTGCTAATGACGCCGTGCGAAGAATTACAGGAGGAGCTGAAGTTCTCATTAACGCTGGTTGCGGGAAATTCTTCCGGTGGACTTGCGAGAATGTATCAGAACAGAAGCTAATGATGGCTTCTAGACGTGACCTGTTTGCATCTGCTGGCCAGTTATGAGAACACAAGATCGTCATCTGCAAAACTTGCATTGTGTGGTGGCGATAAGTCTCTCTTGTATGAAAATGGCGAGCGTCTTGGAGCTTTTACGAGGTACATTTGATTACTTTTCTCATTGGTGTCTGAATTGCTTGATTTGCTGGCTTTTGTGGTTAATCTGTCCATCAGTTCTCCATAATAGTCTCGAGTGTGAACTAGCTTTCATAAAACAGAAAATGAACTAGTAAAGAAAAGGCTGAGCTACAATCGGTTTCCAGATGTCCCTAAATATTTTATTATTAGATAGGAGGAAGGTTCTGAAATGCAAACTTACAAGAATAAGGATTTGGAAGTTTTCCTTTCTGTTAATTAGTATCTTTTACATGACAGAAATTCAATCTTGAAATCAAGACGGTGGTTATAGCTTCTAACATTTTCCAAGAAACTGATCGAGTGAATACATCTAAATACATGTTGTTTTGCCAGTTCTTGTTGCTTTGCTATCAAATCTACAATATGGATCAACTTCGACTGTACGAAGTACATACTTTTATGTGCACCTGTCCAAAGATGCAATACTACAGTTGTCATTTTGAAGGTGCCTTAAAACTGAACACTCAAAATGTTTTGAAGTCAAACATCCGAAACATATTTATGCGTGTTTGTGGTTTTGCAAGTGTCTTTGAGATGCTCAAGGAGTTGTTGCTACTAAAGTTTAGCATAACATTGCTCCATAGCCTGTAAGACGTCCACCTCTTCCCCCTCTCCTTTCTCGCCTGACTAGGCTACTTTTCAAAATGGAGTGAGATCACCACTTATTGGAACTATTACTTCACTATATAATAAAGCTTAGCTTGAGATTAAGCGTAGGTAAGGAGTCGAGTAATACAGTCTTTTAGATGCTGATTTGTTATTTCCTAATTCATTGATGAACTATATGATAGGTAACTTTTCTAGGAGTCAAATAACAAATCAATGTTGATAGGATGAACAAGTAGAGATCAACCCGCAGAGAAATACCCGACAGGTTACCTCTGTGGACCATGCATTCTGCTCTGCGGGTGGATGTATTCTTTAGTAGTGCTCTGAAAAATTTTAAAGGAAGTTTTGCAGAAATTCAGTTCATGATGGGCAGGGATCAATTCCCCCCGTCATAAATAAAGTCAAATTATCAGAATGGCCTAGTGGTTGGTCTTTAGAGAGGATGTTATCTATTGTCAAGTGTCCGAAAGCTACAATGAGAATATCATAGTATTTGGAATCTCAAAATCAGTTCATGATGAACATGGGTTAAAAGTTTCAGCATCATAAATGGAAGTTGCCTCTGTTGTCCACTAGTTGATCATCGGTTAGGATTTTATAACCCGTCAAGAGCATAGCAAGGTACAATTAAAATTTGAGCACAGAAGGGTATTAAATTCAGTTTGTGATGAACTTCGGTTGAGATTTCTACCATCATAAATGGAATTAACTAATATTGCCCAGCAGTTGATTGTAGGTGAGGGTGCTAAAGAACGTCAAAATTTTTGCATAGGAGGATGTCATGGTTTGTGGAATTTCAAATTAATTTCTCTGTTGATTTTTTGTGATTTACGTTGTATTAATAGGGGCATGGAGTGGAACAAAATACTAGACGATGAACTGAGCTATAATTTTTCTTTTGGACAAAATAAGCTATCATTGATACCCATAATGTAAAAAAATGCTAATCACAGGTGCGTAATCATATCCTTTTGTATGGCAACTTCATATTTTACATACGGCTCTTGCTCTTTTTGTTTTATAGCAAGGAAAGATGCTAAGTTGAAAGGCTCTGAAGTCTGGCAAGTTTAGAAGATTCGTCAATTAAAATTGAGTAG

mRNA sequence

ATGAAGGCGGCCGAGGCGATCAAGACGACTGAGGATCTTGCGAGGAATGTTGTATTGTTTTTCCGTCTTTCAATTACGTTACGAGGAGTAGCATTGCGCGGAAATTTTCCATTTCGCGAAGCAGCGTCGCGACATCGTCTTGAAAATTTTCTTTCGTTTGTCAATGTTTCCGGGCACAGTGTTGCTAATGACGCCGTGCGAAGAATTACAGGAGGAGCTGAAGTTCTCATTAACGCTGGTTGCGGGAAATTCTTCCGGTGGACTTGCGAGAATGTATCAGAACAGAAGCTAATGATGGCTTCTAGACGTGACCTTTATGAGAACACAAGATCGTCATCTGCAAAACTTGCATTGTGTGGTGGCGATAAGTCTCTCTTGTATGAAAATGGCGAGCGTCTTGGAGCTTTTACGAGGGGCATGGAGTGGAACAAAATACTAGACGATGAACTGAGCTATAATTTTTCTTTTGGACAAAATAAGCTATCATTGATACCCATAATGTAAAAAAATGCTAATCACAGGTGCGTAATCATATCCTTTTGTATGGCAACTTCATATTTTACATACGGCTCTTGCTCTTTTTGTTTTATAGCAAGGAAAGATGCTAAGTTGAAAGGCTCTGAAGTCTGGCAAGTTTAGAAGATTCGTCAATTAAAATTGAGTAG

Coding sequence (CDS)

ATGAAGGCGGCCGAGGCGATCAAGACGACTGAGGATCTTGCGAGGAATGTTGTATTGTTTTTCCGTCTTTCAATTACGTTACGAGGAGTAGCATTGCGCGGAAATTTTCCATTTCGCGAAGCAGCGTCGCGACATCGTCTTGAAAATTTTCTTTCGTTTGTCAATGTTTCCGGGCACAGTGTTGCTAATGACGCCGTGCGAAGAATTACAGGAGGAGCTGAAGTTCTCATTAACGCTGGTTGCGGGAAATTCTTCCGGTGGACTTGCGAGAATGTATCAGAACAGAAGCTAATGATGGCTTCTAGACGTGACCTTTATGAGAACACAAGATCGTCATCTGCAAAACTTGCATTGTGTGGTGGCGATAAGTCTCTCTTGTATGAAAATGGCGAGCGTCTTGGAGCTTTTACGAGGGGCATGGAGTGGAACAAAATACTAGACGATGAACTGAGCTATAATTTTTCTTTTGGACAAAATAAGCTATCATTGATACCCATAATGTAA

Protein sequence

MKAAEAIKTTEDLARNVVLFFRLSITLRGVALRGNFPFREAASRHRLENFLSFVNVSGHSVANDAVRRITGGAEVLINAGCGKFFRWTCENVSEQKLMMASRRDLYENTRSSSAKLALCGGDKSLLYENGERLGAFTRGMEWNKILDDELSYNFSFGQNKLSLIPIM
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg02997Carg02997gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg02997-RACarg02997-RA-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg02997-RA.exon.1Carg02997-RA.exon.1exon
Carg02997-RA.exon.2Carg02997-RA.exon.2exon
Carg02997-RA.exon.3Carg02997-RA.exon.3exon
Carg02997-RA.exon.4Carg02997-RA.exon.4exon
Carg02997-RA.exon.5Carg02997-RA.exon.5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg02997-RA.CDS.1Carg02997-RA.CDS.1CDS
Carg02997-RA.CDS.2Carg02997-RA.CDS.2CDS
Carg02997-RA.CDS.3Carg02997-RA.CDS.3CDS
Carg02997-RA.CDS.4Carg02997-RA.CDS.4CDS
Carg02997-RA.CDS.5Carg02997-RA.CDS.5CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg02997-RA.three_prime_UTR.1Carg02997-RA.three_prime_UTR.1three_prime_UTR