Carg00784-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTACTCCCACATCGAGGACGTGGGTTTTTCCGAAGAGTAATTACTGGAAAAATTGGTCTGATTTTAAGGCGGTGGGTGTGGAGCGTGGGTGCAGAGAGAATTATTTGCGGCGGACAGTTCAGGATCCGACATGCCATGAGAGTGGGAGAAGAAAATGGAACTGGGGATTGGCGGCGGTGAGAGGCGGCAAACGGGGGGAGGCTAAAAATGATGCGTATGATAAAATTCCTGAAGAAGATAGGAGGTTTATTGAAGAATTCAGAGATGCTTATCCCTATATATTCTCCCATATAGGCCGTACTTTTGTCGTCGTTATATCTGCCGAAATTGTGGCTAGTCCTCGCCTCCATGCCTTGCTCAAGGTCTCTCTTCCTCCTTTCCTGAAAAAAAAAGAAGTTACTTTCAATTCTCTGTCAATGGCGGATGATTATGCACTGTAGTCTTTGTCTTAGTTTTAGTTGCTTGGGGACTTAACCGAGATAGAGAAATCATCGAGTAGACACCCTTGTTTACATCGCCACAAAAAAAGTTTCTTTTTGTTTAATTATTTTAAACTCAGAAAGTAAAAGCTTTGGAGTTCGTTACCTTTTATGTTTTTGGTTTCTTGAAAATCCGATTTTGGAAGTATTGTGAAGTGGAAGCGCTTTGA ATGGCTACTCCCACATCGAGGACGTGGGTTTTTCCGAAGAGTAATTACTGGAAAAATTGGTCTGATTTTAAGGCGGTGGGTGTGGAGCGTGGGTGCAGAGAGAATTATTTGCGGCGGACAGTTCAGGATCCGACATGCCATGAGAGTGGGAGAAGAAAATGGAACTGGGGATTGGCGGCGGTGAGAGGCGGCAAACGGGGGGAGGCTAAAAATGATGCGTATGATAAAATTCCTGAAGAAGATAGGAGGTTTATTGAAGAATTCAGAGATGCTTATCCCTATATATTCTCCCATATAGGCCGTACTTTTGTCGTCGTTATATCTGCCGAAATTGTGGCTAGTCCTCGCCTCCATGCCTTGCTCAAGAAAGTAAAAGCTTTGGAGTTCGTTACCTTTTATGTTTTTGGTTTCTTGAAAATCCGATTTTGGAAGTATTGTGAAGTGGAAGCGCTTTGA ATGGCTACTCCCACATCGAGGACGTGGGTTTTTCCGAAGAGTAATTACTGGAAAAATTGGTCTGATTTTAAGGCGGTGGGTGTGGAGCGTGGGTGCAGAGAGAATTATTTGCGGCGGACAGTTCAGGATCCGACATGCCATGAGAGTGGGAGAAGAAAATGGAACTGGGGATTGGCGGCGGTGAGAGGCGGCAAACGGGGGGAGGCTAAAAATGATGCGTATGATAAAATTCCTGAAGAAGATAGGAGGTTTATTGAAGAATTCAGAGATGCTTATCCCTATATATTCTCCCATATAGGCCGTACTTTTGTCGTCGTTATATCTGCCGAAATTGTGGCTAGTCCTCGCCTCCATGCCTTGCTCAAGAAAGTAAAAGCTTTGGAGTTCGTTACCTTTTATGTTTTTGGTTTCTTGAAAATCCGATTTTGGAAGTATTGTGAAGTGGAAGCGCTTTGA MATPTSRTWVFPKSNYWKNWSDFKAVGVERGCRENYLRRTVQDPTCHESGRRKWNWGLAAVRGGKRGEAKNDAYDKIPEEDRRFIEEFRDAYPYIFSHIGRTFVVVISAEIVASPRLHALLKKVKALEFVTFYVFGFLKIRFWKYCEVEAL
BLAST of Carg00784-RA vs. NCBI nr
Match: XP_022950017.1 (probable amino-acid acetyltransferase NAGS2, chloroplastic isoform X2 [Cucurbita moschata]) HSP 1 Score: 260.8 bits (665), Expect = 2.9e-66 Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 0
BLAST of Carg00784-RA vs. NCBI nr
Match: XP_023543136.1 (probable amino-acid acetyltransferase NAGS2, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 260.4 bits (664), Expect = 3.8e-66 Identity = 122/127 (96.06%), Postives = 124/127 (97.64%), Query Frame = 0
BLAST of Carg00784-RA vs. NCBI nr
Match: XP_022977436.1 (probable amino-acid acetyltransferase NAGS2, chloroplastic isoform X2 [Cucurbita maxima]) HSP 1 Score: 250.4 bits (638), Expect = 4.0e-63 Identity = 117/127 (92.13%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of Carg00784-RA vs. NCBI nr
Match: AFA37979.1 (N-acetylglutamate synthase [Cucurbita maxima x Cucurbita moschata]) HSP 1 Score: 249.2 bits (635), Expect = 8.8e-63 Identity = 116/127 (91.34%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of Carg00784-RA vs. NCBI nr
Match: XP_008440407.1 (PREDICTED: probable amino-acid acetyltransferase NAGS2, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 163.3 bits (412), Expect = 6.4e-37 Identity = 91/140 (65.00%), Postives = 103/140 (73.57%), Query Frame = 0
BLAST of Carg00784-RA vs. TAIR10
Match: AT4G37670.2 (N-acetyl-l-glutamate synthase 2) HSP 1 Score: 52.8 bits (125), Expect = 2.2e-07 Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of Carg00784-RA vs. TAIR10
Match: AT2G22910.1 (N-acetyl-l-glutamate synthase 1) HSP 1 Score: 41.6 bits (96), Expect = 5.1e-04 Identity = 18/47 (38.30%), Postives = 31/47 (65.96%), Query Frame = 0
BLAST of Carg00784-RA vs. Swiss-Prot
Match: sp|B5X4Z4|NAGS2_ARATH (Probable amino-acid acetyltransferase NAGS2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NAGS2 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 4.0e-06 Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of Carg00784-RA vs. TrEMBL
Match: tr|H6V8U2|H6V8U2_9ROSI (N-acetylglutamate synthase OS=Cucurbita maxima x Cucurbita moschata OX=334420 GN=NAGS PE=2 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 5.8e-63 Identity = 116/127 (91.34%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of Carg00784-RA vs. TrEMBL
Match: tr|A0A1S3B1T5|A0A1S3B1T5_CUCME (probable amino-acid acetyltransferase NAGS2, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484863 PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 4.2e-37 Identity = 91/140 (65.00%), Postives = 103/140 (73.57%), Query Frame = 0
BLAST of Carg00784-RA vs. TrEMBL
Match: tr|A0A0A0KFZ3|A0A0A0KFZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495740 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.3e-33 Identity = 87/136 (63.97%), Postives = 99/136 (72.79%), Query Frame = 0
BLAST of Carg00784-RA vs. TrEMBL
Match: tr|A0A2P5FSE8|A0A2P5FSE8_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_033310 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.7e-09 Identity = 40/95 (42.11%), Postives = 54/95 (56.84%), Query Frame = 0
BLAST of Carg00784-RA vs. TrEMBL
Match: tr|W9RJH1|W9RJH1_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_009378 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.8e-08 Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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