CSPI07G18420.2 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGCGAATGCGCATTTGATCGTGAAGGACAGCTTCTCCCTTGTGTTCAAGAGAGAGAGATCTATCATTCTTATTTGGGGCCGATCTCTCTATTCTCCTCTCTTCAATTCCGTAAGTTTTTCCCATTCAATCTCTTCTCTCATTTCTCTCTAAGATCTGTTCACTATCCTCTTTTATTTTCATCCTTCCTGCTTCGATCTGTTCTCCTGGTGATTCCCTTTTTCCTTTCCTGTTTTTTCTTTTATTGATCTTCGTATTTATTGTTCTTTTCTGGGTTTTCATTGTTTTTTATTTTCTGATCTGGGTTTCTGTTTTCTCGCCTTGATGTTTTGTATTTGGATCTGATCTGACGACCACCCTTTTTTATTTGAATTGCGTTTCCTATGTTTATACCTGGATTTTTATTGATGCATGTGTTTAACCGATTGGTTGGATGCGTTTTCTTTGTGCTGGATCTAGCGGTCCTTGTTTTTAATTTGAATTGTGGGTAAAAGTGGCATTATGGTAATGTGTTTGGTGTTTGATTTTGAATCTGGGCTAGTTGATTTTTGAATTACAAAGATCGGATCCTCTTCTTTTTTGGGTTGGCTTTACATTTTTGGCTGATTTAAGTATTTGATGTCGTAGTATTTTAAGGGGTAACTGATGCCGGCTTGTTGTGTTTGTATTCAGTTTACTTGAAAAATGGGGCTGTCTTTTACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATTCTCATGGTGGGTCTTGACGCAGCTGGTAAGACGACAATCCTTTACAAGCTCAAGCTGGGAGAAATTGTCACCACCATTCCTACCATCGGTAAGTTGTTGTTTCTATATCCAACTACTGATTTCACGGATTAATAAATGTTACAGTTGATGCGTTTTGTTTACAACAATTTGATGATTAGTCATTTGTGTCTAGATCATAGGCATTGAATATAATTGTTTAACTTGGTAGTTTCATGTTTGTTTGCATGATTGTCCTCATCACAAAAAATTTTAAGTTGATATAATGAATTGTTGTTTTATCTTCAAGGAGATGAATTTATAGAGGAGAACTGGATGATTAATCTAATTAAACACATAGGATCTGTAAAGGCTCACACTTGCATTTCTTATTTGTACGCCTTCAATTGTTATCAATATGGAAGGAGGGATATTTCTTTTGTGAATTTCAGTTAATTAAAGCCTATGCCTTTGAGTGAACCTGCAAACATAAGTTTCTGTCATAATTCACCGCAGGATTCCAGACTTGATATTTTTGAAAAAGTGGGGTGATAGAATTTAGAAACAATGTGATATTCAAGACTAAACACTTTGACCTAACTGCATATTGGCATTTTGATTTCTGTACAAGAAGCTTTTGTGAATACATAATCTTAGTTTGCGATTACTGTTTCTGAAAAAGGAGAATGTGAGATCCGAGGTATAACTCACTTGCGTATGGCTATGCAGGTTTTAATGTTGAGACTGTGGAATACAAGAACATCAGCTTCACCGTCTGGGATGTGGGGGGCCAAGACAAGGTACATTTGATCGTTTCAAGGTGCTAGATTTCTGACAGTGTGTATAAATGAAGATGTTGTTGCTATTATTTTGAGCATGGTACATGTGTAACTTGGTAGATGATTGTTTTAAATCAATCAGTGTGTATTTGTTTGATGTTAAATCTGGCTTATCATTTTCTTTTTTTTCTTGTCATACCTAGCTTTTTAGTCATAAGTATAGATTTTACTACTGAATCCCTTTAAACTTTTCAACTTTCTTAGGAATGTTGGTATTAAAATTTTCTATTTAACATGTTTAAACAATTCGACACTTGTGCTTCCATGGACTCATAGTTGGTAGCCAATCTTCTAGCACATGGATGATATTAATTGTTCTTTCCACTTATTTGGTGCTTGTTTTGTTCCAAGATCCGACCATTGTGGAGGCATTATTTCCAGAACACCCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGTACTCATAATGGAATTTGATTATTAGACTTCGATACAATGAAAAATTGTTTCATTCTACTATGTTGTCTAGATGATAACATACATGCGTTGCACTTACAGGATGAGCTGAGGGATGCTGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCTAATGCCATGAATGCTGCTGAGATCACCGACAAGCTTGGTCTTCACTCCCTCCGGCAACGTCACTGGTACATTTGACGATCATAAACTCTTAAAAAACTTGCAATTGCTTAAAACTTTTCGGTAGTAATTAGTACCATGTCTTGAAATCCTGTTTCAGGTACATCCAGAGCACATGTGCCACATCCGGTGAAGGGCTGTATGAAGGACTTGACTGGCTCTCAAACAATATTGCCAACAAGGTAAAAAATAACCATGTTCTTTGTGTAACTCAATGAACAAATTTTCTGCAGTATACAATAGAATAAGAAATAACCATATATCAGTATTGCCTGAAAAGGAACTTCATTTAAAAGAATTAGAAGAGGCATAAGGAAATGGTTTGTTTCTCAATCAGTTTGGTTGGGATATTAGTGTACAAAAGTTTACTAGCTTGTGGTGGAAGTTCGACTTTGCATGGTCGATGATAAGATTGTTCCGTTTTCCTGATTTGCAGGCGTAGATGGGGATTTCTTTCGAGCTGGGATTGCTTCTGGAAAATCAAATTGATGTGATTTATCCCTTGTTTACGGGCATTTTTGTTGGATTTACCTGATCTATACGACGTTCCTAATGGATGATTCCTAGGTTGGTGTTGGATCTATGAATAATGAAAGAAATTTTGAAGTATTTTGTCATGTTATCGACTCAATAGCATTGGTTTCTTTTCTTTTCTTTTCTTTTTTCTTTTTTTAATTTTAATGTAATGAATTAAATGATGTTCTTAAAATAGGTGTATTTGTACGAGAACCATGTTTGTTATTTGGAATGGATTGCTGAAAAGAAATTACTTTGGAACTTTTTATTGTATTATTCTCTTCATTTGCTTCCCATTAGACTCCAT ATGCGTATTCTCATGGTGGGTCTTGACGCAGCTGGTAAGACGACAATCCTTTACAAGCTCAAGCTGGGAGAAATTGTCACCACCATTCCTACCATCGGTTTTAATGTTGAGACTGTGGAATACAAGAACATCAGCTTCACCGTCTGGGATGTGGGGGGCCAAGACAAGATCCGACCATTGTGGAGGCATTATTTCCAGAACACCCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGATGAGCTGAGGGATGCTGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCTAATGCCATGAATGCTGCTGAGATCACCGACAAGCTTGGTCTTCACTCCCTCCGGCAACGTCACTGGTACATCCAGAGCACATGTGCCACATCCGGTGAAGGGCTGTATGAAGGACTTGACTGGCTCTCAAACAATATTGCCAACAAGGCGTAG ATGCGTATTCTCATGGTGGGTCTTGACGCAGCTGGTAAGACGACAATCCTTTACAAGCTCAAGCTGGGAGAAATTGTCACCACCATTCCTACCATCGGTTTTAATGTTGAGACTGTGGAATACAAGAACATCAGCTTCACCGTCTGGGATGTGGGGGGCCAAGACAAGATCCGACCATTGTGGAGGCATTATTTCCAGAACACCCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGATGAGCTGAGGGATGCTGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCTAATGCCATGAATGCTGCTGAGATCACCGACAAGCTTGGTCTTCACTCCCTCCGGCAACGTCACTGGTACATCCAGAGCACATGTGCCACATCCGGTGAAGGGCTGTATGAAGGACTTGACTGGCTCTCAAACAATATTGCCAACAAGGCGTAG
BLAST of CSPI07G18420.2 vs. Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2) HSP 1 Score: 334.7 bits (857), Expect = 5.6e-91 Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 334.3 bits (856), Expect = 7.3e-91 Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. Swiss-Prot
Match: ARF2B_ARATH (ADP-ribosylation factor 2-B OS=Arabidopsis thaliana GN=ARF2-B PE=2 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 9.6e-91 Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. Swiss-Prot
Match: ARF2A_ARATH (ADP-ribosylation factor 2-A OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=2) HSP 1 Score: 334.0 bits (855), Expect = 9.6e-91 Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3) HSP 1 Score: 332.8 bits (852), Expect = 2.1e-90 Identity = 162/164 (98.78%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. TrEMBL
Match: A0A0B0P4S5_GOSAR (ADP-ribosylation factor 2-B-like protein OS=Gossypium arboreum GN=F383_02670 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 2.2e-89 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. TrEMBL
Match: C6SXM4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G029800 PE=2 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 2.2e-89 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. TrEMBL
Match: B8LPC8_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 2.2e-89 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. TrEMBL
Match: F2VXU4_HEVBR (Arf2 OS=Hevea brasiliensis PE=2 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 2.2e-89 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. TrEMBL
Match: A9P9U3_POPTR (ADP-ribosylation factor family protein OS=Populus trichocarpa GN=POPTR_0002s19210g PE=2 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 2.2e-89 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. TAIR10
Match: AT3G62290.1 (AT3G62290.1 ADP-ribosylation factor A1E) HSP 1 Score: 336.3 bits (861), Expect = 1.1e-92 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. TAIR10
Match: AT2G47170.1 (AT2G47170.1 Ras-related small GTP-binding family protein) HSP 1 Score: 334.3 bits (856), Expect = 4.1e-92 Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. TAIR10
Match: AT1G10630.1 (AT1G10630.1 ADP-ribosylation factor A1F) HSP 1 Score: 334.3 bits (856), Expect = 4.1e-92 Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. TAIR10
Match: AT1G70490.1 (AT1G70490.1 Ras-related small GTP-binding family protein) HSP 1 Score: 334.0 bits (855), Expect = 5.4e-92 Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. TAIR10
Match: AT1G23490.1 (AT1G23490.1 ADP-ribosylation factor 1) HSP 1 Score: 334.0 bits (855), Expect = 5.4e-92 Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. NCBI nr
Match: gi|982900593|gb|AMB19677.1| (putative ADP-ribosylation factor A1F protein 1, partial [Taraxacum kok-saghyz]) HSP 1 Score: 336.3 bits (861), Expect = 3.1e-89 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. NCBI nr
Match: gi|595829048|ref|XP_007205794.1| (hypothetical protein PRUPE_ppa010615mg [Prunus persica]) HSP 1 Score: 336.3 bits (861), Expect = 3.1e-89 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. NCBI nr
Match: gi|307135971|gb|ADN33830.1| (ADP-ribosylation factor [Cucumis melo subsp. melo]) HSP 1 Score: 336.3 bits (861), Expect = 3.1e-89 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. NCBI nr
Match: gi|922478325|ref|XP_013637399.1| (PREDICTED: ADP-ribosylation factor 1-like isoform X1 [Brassica oleracea var. oleracea]) HSP 1 Score: 336.3 bits (861), Expect = 3.1e-89 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of CSPI07G18420.2 vs. NCBI nr
Match: gi|148908804|gb|ABR17508.1| (unknown [Picea sitchensis]) HSP 1 Score: 336.3 bits (861), Expect = 3.1e-89 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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