CSPI07G18420.2 (mRNA) Wild cucumber (PI 183967)

NameCSPI07G18420.2
TypemRNA
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionADP-ribosylation factor
LocationChr7 : 16466570 .. 16469654 (-)
Sequence length495
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGCGAATGCGCATTTGATCGTGAAGGACAGCTTCTCCCTTGTGTTCAAGAGAGAGAGATCTATCATTCTTATTTGGGGCCGATCTCTCTATTCTCCTCTCTTCAATTCCGTAAGTTTTTCCCATTCAATCTCTTCTCTCATTTCTCTCTAAGATCTGTTCACTATCCTCTTTTATTTTCATCCTTCCTGCTTCGATCTGTTCTCCTGGTGATTCCCTTTTTCCTTTCCTGTTTTTTCTTTTATTGATCTTCGTATTTATTGTTCTTTTCTGGGTTTTCATTGTTTTTTATTTTCTGATCTGGGTTTCTGTTTTCTCGCCTTGATGTTTTGTATTTGGATCTGATCTGACGACCACCCTTTTTTATTTGAATTGCGTTTCCTATGTTTATACCTGGATTTTTATTGATGCATGTGTTTAACCGATTGGTTGGATGCGTTTTCTTTGTGCTGGATCTAGCGGTCCTTGTTTTTAATTTGAATTGTGGGTAAAAGTGGCATTATGGTAATGTGTTTGGTGTTTGATTTTGAATCTGGGCTAGTTGATTTTTGAATTACAAAGATCGGATCCTCTTCTTTTTTGGGTTGGCTTTACATTTTTGGCTGATTTAAGTATTTGATGTCGTAGTATTTTAAGGGGTAACTGATGCCGGCTTGTTGTGTTTGTATTCAGTTTACTTGAAAAATGGGGCTGTCTTTTACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATTCTCATGGTGGGTCTTGACGCAGCTGGTAAGACGACAATCCTTTACAAGCTCAAGCTGGGAGAAATTGTCACCACCATTCCTACCATCGGTAAGTTGTTGTTTCTATATCCAACTACTGATTTCACGGATTAATAAATGTTACAGTTGATGCGTTTTGTTTACAACAATTTGATGATTAGTCATTTGTGTCTAGATCATAGGCATTGAATATAATTGTTTAACTTGGTAGTTTCATGTTTGTTTGCATGATTGTCCTCATCACAAAAAATTTTAAGTTGATATAATGAATTGTTGTTTTATCTTCAAGGAGATGAATTTATAGAGGAGAACTGGATGATTAATCTAATTAAACACATAGGATCTGTAAAGGCTCACACTTGCATTTCTTATTTGTACGCCTTCAATTGTTATCAATATGGAAGGAGGGATATTTCTTTTGTGAATTTCAGTTAATTAAAGCCTATGCCTTTGAGTGAACCTGCAAACATAAGTTTCTGTCATAATTCACCGCAGGATTCCAGACTTGATATTTTTGAAAAAGTGGGGTGATAGAATTTAGAAACAATGTGATATTCAAGACTAAACACTTTGACCTAACTGCATATTGGCATTTTGATTTCTGTACAAGAAGCTTTTGTGAATACATAATCTTAGTTTGCGATTACTGTTTCTGAAAAAGGAGAATGTGAGATCCGAGGTATAACTCACTTGCGTATGGCTATGCAGGTTTTAATGTTGAGACTGTGGAATACAAGAACATCAGCTTCACCGTCTGGGATGTGGGGGGCCAAGACAAGGTACATTTGATCGTTTCAAGGTGCTAGATTTCTGACAGTGTGTATAAATGAAGATGTTGTTGCTATTATTTTGAGCATGGTACATGTGTAACTTGGTAGATGATTGTTTTAAATCAATCAGTGTGTATTTGTTTGATGTTAAATCTGGCTTATCATTTTCTTTTTTTTCTTGTCATACCTAGCTTTTTAGTCATAAGTATAGATTTTACTACTGAATCCCTTTAAACTTTTCAACTTTCTTAGGAATGTTGGTATTAAAATTTTCTATTTAACATGTTTAAACAATTCGACACTTGTGCTTCCATGGACTCATAGTTGGTAGCCAATCTTCTAGCACATGGATGATATTAATTGTTCTTTCCACTTATTTGGTGCTTGTTTTGTTCCAAGATCCGACCATTGTGGAGGCATTATTTCCAGAACACCCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGTACTCATAATGGAATTTGATTATTAGACTTCGATACAATGAAAAATTGTTTCATTCTACTATGTTGTCTAGATGATAACATACATGCGTTGCACTTACAGGATGAGCTGAGGGATGCTGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCTAATGCCATGAATGCTGCTGAGATCACCGACAAGCTTGGTCTTCACTCCCTCCGGCAACGTCACTGGTACATTTGACGATCATAAACTCTTAAAAAACTTGCAATTGCTTAAAACTTTTCGGTAGTAATTAGTACCATGTCTTGAAATCCTGTTTCAGGTACATCCAGAGCACATGTGCCACATCCGGTGAAGGGCTGTATGAAGGACTTGACTGGCTCTCAAACAATATTGCCAACAAGGTAAAAAATAACCATGTTCTTTGTGTAACTCAATGAACAAATTTTCTGCAGTATACAATAGAATAAGAAATAACCATATATCAGTATTGCCTGAAAAGGAACTTCATTTAAAAGAATTAGAAGAGGCATAAGGAAATGGTTTGTTTCTCAATCAGTTTGGTTGGGATATTAGTGTACAAAAGTTTACTAGCTTGTGGTGGAAGTTCGACTTTGCATGGTCGATGATAAGATTGTTCCGTTTTCCTGATTTGCAGGCGTAGATGGGGATTTCTTTCGAGCTGGGATTGCTTCTGGAAAATCAAATTGATGTGATTTATCCCTTGTTTACGGGCATTTTTGTTGGATTTACCTGATCTATACGACGTTCCTAATGGATGATTCCTAGGTTGGTGTTGGATCTATGAATAATGAAAGAAATTTTGAAGTATTTTGTCATGTTATCGACTCAATAGCATTGGTTTCTTTTCTTTTCTTTTCTTTTTTCTTTTTTTAATTTTAATGTAATGAATTAAATGATGTTCTTAAAATAGGTGTATTTGTACGAGAACCATGTTTGTTATTTGGAATGGATTGCTGAAAAGAAATTACTTTGGAACTTTTTATTGTATTATTCTCTTCATTTGCTTCCCATTAGACTCCAT

mRNA sequence

ATGCGTATTCTCATGGTGGGTCTTGACGCAGCTGGTAAGACGACAATCCTTTACAAGCTCAAGCTGGGAGAAATTGTCACCACCATTCCTACCATCGGTTTTAATGTTGAGACTGTGGAATACAAGAACATCAGCTTCACCGTCTGGGATGTGGGGGGCCAAGACAAGATCCGACCATTGTGGAGGCATTATTTCCAGAACACCCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGATGAGCTGAGGGATGCTGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCTAATGCCATGAATGCTGCTGAGATCACCGACAAGCTTGGTCTTCACTCCCTCCGGCAACGTCACTGGTACATCCAGAGCACATGTGCCACATCCGGTGAAGGGCTGTATGAAGGACTTGACTGGCTCTCAAACAATATTGCCAACAAGGCGTAG

Coding sequence (CDS)

ATGCGTATTCTCATGGTGGGTCTTGACGCAGCTGGTAAGACGACAATCCTTTACAAGCTCAAGCTGGGAGAAATTGTCACCACCATTCCTACCATCGGTTTTAATGTTGAGACTGTGGAATACAAGAACATCAGCTTCACCGTCTGGGATGTGGGGGGCCAAGACAAGATCCGACCATTGTGGAGGCATTATTTCCAGAACACCCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGATGAGCTGAGGGATGCTGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCTAATGCCATGAATGCTGCTGAGATCACCGACAAGCTTGGTCTTCACTCCCTCCGGCAACGTCACTGGTACATCCAGAGCACATGTGCCACATCCGGTGAAGGGCTGTATGAAGGACTTGACTGGCTCTCAAACAATATTGCCAACAAGGCGTAG
BLAST of CSPI07G18420.2 vs. Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 334.7 bits (857), Expect = 5.6e-91
Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

BLAST of CSPI07G18420.2 vs. Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 334.3 bits (856), Expect = 7.3e-91
Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

BLAST of CSPI07G18420.2 vs. Swiss-Prot
Match: ARF2B_ARATH (ADP-ribosylation factor 2-B OS=Arabidopsis thaliana GN=ARF2-B PE=2 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 9.6e-91
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181

BLAST of CSPI07G18420.2 vs. Swiss-Prot
Match: ARF2A_ARATH (ADP-ribosylation factor 2-A OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=2)

HSP 1 Score: 334.0 bits (855), Expect = 9.6e-91
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181

BLAST of CSPI07G18420.2 vs. Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 332.8 bits (852), Expect = 2.1e-90
Identity = 162/164 (98.78%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

BLAST of CSPI07G18420.2 vs. TrEMBL
Match: A0A0B0P4S5_GOSAR (ADP-ribosylation factor 2-B-like protein OS=Gossypium arboreum GN=F383_02670 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.2e-89
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

BLAST of CSPI07G18420.2 vs. TrEMBL
Match: C6SXM4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G029800 PE=2 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.2e-89
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

BLAST of CSPI07G18420.2 vs. TrEMBL
Match: B8LPC8_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.2e-89
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

BLAST of CSPI07G18420.2 vs. TrEMBL
Match: F2VXU4_HEVBR (Arf2 OS=Hevea brasiliensis PE=2 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.2e-89
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

BLAST of CSPI07G18420.2 vs. TrEMBL
Match: A9P9U3_POPTR (ADP-ribosylation factor family protein OS=Populus trichocarpa GN=POPTR_0002s19210g PE=2 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.2e-89
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

BLAST of CSPI07G18420.2 vs. TAIR10
Match: AT3G62290.1 (AT3G62290.1 ADP-ribosylation factor A1E)

HSP 1 Score: 336.3 bits (861), Expect = 1.1e-92
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

BLAST of CSPI07G18420.2 vs. TAIR10
Match: AT2G47170.1 (AT2G47170.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 334.3 bits (856), Expect = 4.1e-92
Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

BLAST of CSPI07G18420.2 vs. TAIR10
Match: AT1G10630.1 (AT1G10630.1 ADP-ribosylation factor A1F)

HSP 1 Score: 334.3 bits (856), Expect = 4.1e-92
Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

BLAST of CSPI07G18420.2 vs. TAIR10
Match: AT1G70490.1 (AT1G70490.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 334.0 bits (855), Expect = 5.4e-92
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181

BLAST of CSPI07G18420.2 vs. TAIR10
Match: AT1G23490.1 (AT1G23490.1 ADP-ribosylation factor 1)

HSP 1 Score: 334.0 bits (855), Expect = 5.4e-92
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181

BLAST of CSPI07G18420.2 vs. NCBI nr
Match: gi|982900593|gb|AMB19677.1| (putative ADP-ribosylation factor A1F protein 1, partial [Taraxacum kok-saghyz])

HSP 1 Score: 336.3 bits (861), Expect = 3.1e-89
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 16  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 75

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 76  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 135

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 136 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 179

BLAST of CSPI07G18420.2 vs. NCBI nr
Match: gi|595829048|ref|XP_007205794.1| (hypothetical protein PRUPE_ppa010615mg [Prunus persica])

HSP 1 Score: 336.3 bits (861), Expect = 3.1e-89
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 80  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 139

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 140 WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 199

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 200 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 243

BLAST of CSPI07G18420.2 vs. NCBI nr
Match: gi|307135971|gb|ADN33830.1| (ADP-ribosylation factor [Cucumis melo subsp. melo])

HSP 1 Score: 336.3 bits (861), Expect = 3.1e-89
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 164

BLAST of CSPI07G18420.2 vs. NCBI nr
Match: gi|922478325|ref|XP_013637399.1| (PREDICTED: ADP-ribosylation factor 1-like isoform X1 [Brassica oleracea var. oleracea])

HSP 1 Score: 336.3 bits (861), Expect = 3.1e-89
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 33  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 92

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 93  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 152

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 153 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 196

BLAST of CSPI07G18420.2 vs. NCBI nr
Match: gi|148908804|gb|ABR17508.1| (unknown [Picea sitchensis])

HSP 1 Score: 336.3 bits (861), Expect = 3.1e-89
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

Query: 1   MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
           MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL
Sbjct: 18  MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 77

Query: 61  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 120
           WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA
Sbjct: 78  WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137

Query: 121 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 165
           EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ARF2_ORYSJ5.6e-9199.39ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2[more]
ARF1_ARATH7.3e-9199.39ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2[more]
ARF2B_ARATH9.6e-9199.39ADP-ribosylation factor 2-B OS=Arabidopsis thaliana GN=ARF2-B PE=2 SV=1[more]
ARF2A_ARATH9.6e-9199.39ADP-ribosylation factor 2-A OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=2[more]
ARF1_ORYSJ2.1e-9098.78ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A0B0P4S5_GOSAR2.2e-89100.00ADP-ribosylation factor 2-B-like protein OS=Gossypium arboreum GN=F383_02670 PE=... [more]
C6SXM4_SOYBN2.2e-89100.00Uncharacterized protein OS=Glycine max GN=GLYMA_01G029800 PE=2 SV=1[more]
B8LPC8_PICSI2.2e-89100.00Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1[more]
F2VXU4_HEVBR2.2e-89100.00Arf2 OS=Hevea brasiliensis PE=2 SV=1[more]
A9P9U3_POPTR2.2e-89100.00ADP-ribosylation factor family protein OS=Populus trichocarpa GN=POPTR_0002s1921... [more]
Match NameE-valueIdentityDescription
AT3G62290.11.1e-92100.00 ADP-ribosylation factor A1E[more]
AT2G47170.14.1e-9299.39 Ras-related small GTP-binding family protein[more]
AT1G10630.14.1e-9299.39 ADP-ribosylation factor A1F[more]
AT1G70490.15.4e-9299.39 Ras-related small GTP-binding family protein[more]
AT1G23490.15.4e-9299.39 ADP-ribosylation factor 1[more]
Match NameE-valueIdentityDescription
gi|982900593|gb|AMB19677.1|3.1e-89100.00putative ADP-ribosylation factor A1F protein 1, partial [Taraxacum kok-saghyz][more]
gi|595829048|ref|XP_007205794.1|3.1e-89100.00hypothetical protein PRUPE_ppa010615mg [Prunus persica][more]
gi|307135971|gb|ADN33830.1|3.1e-89100.00ADP-ribosylation factor [Cucumis melo subsp. melo][more]
gi|922478325|ref|XP_013637399.1|3.1e-89100.00PREDICTED: ADP-ribosylation factor 1-like isoform X1 [Brassica oleracea var. ole... [more]
gi|148908804|gb|ABR17508.1|3.1e-89100.00unknown [Picea sitchensis][more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR006689Small_GTPase_ARF/SAR
IPR024156Small_GTPase_ARF
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0046686 response to cadmium ion
cellular_component GO:0005622 intracellular
cellular_component GO:0005829 cytosol
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009536 plastid
cellular_component GO:0005774 vacuolar membrane
molecular_function GO:0005525 GTP binding
molecular_function GO:0005507 copper ion binding
molecular_function GO:0016004 phospholipase activator activity

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI07G18420CSPI07G18420gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI07G18420.2CSPI07G18420.2-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI07G18420.2.utr3p1CSPI07G18420.2.utr3p1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI07G18420.2.cds7CSPI07G18420.2.cds7CDS
CSPI07G18420.2.cds6CSPI07G18420.2.cds6CDS
CSPI07G18420.2.cds5CSPI07G18420.2.cds5CDS
CSPI07G18420.2.cds4CSPI07G18420.2.cds4CDS
CSPI07G18420.2.cds3CSPI07G18420.2.cds3CDS
CSPI07G18420.2.cds2CSPI07G18420.2.cds2CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI07G18420.2.utr5p2CSPI07G18420.2.utr5p2five_prime_UTR
CSPI07G18420.2.utr5p1CSPI07G18420.2.utr5p1five_prime_UTR


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 1..140
score: 1.3
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 30..54
score: 9.7E-20coord: 57..82
score: 9.7E-20coord: 2..25
score: 9.7E-20coord: 102..123
score: 9.7
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 1..160
score: 4.7
IPR024156Small GTPase superfamily, ARF typePROFILEPS51417ARFcoord: 1..160
score: 24
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 1..163
score: 1.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..162
score: 8.65
NoneNo IPR availableunknownCoilCoilcoord: 162..164
scor
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..163
score: 2.7E
NoneNo IPR availablePANTHERPTHR11711:SF181ADP-RIBOSYLATION FACTOR A1Fcoord: 1..163
score: 2.7E
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..163
score: 0.
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..164
score: 2.5E
NoneNo IPR availableSMARTSM00178sar_sub_1coord: 1..160
score: 8.0