CSPI07G17430.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCACCAGCATCAAAGCCAGTGATGGTAATTGGAGTCGACGACAGCGAATGTGCAATCGCCGCCCTCGAATGGACGTTGGACCGATTCTTCTCTCAAACGATAGGATTACATCCGTTCAAGCTCGTCGTCGTTCACGTCAAACCATCTCCGGACGTCTTCGTCGGCTTCTCTGGATCGGGAAGTAAGATCGATCTTCTTTATCAGTCCTCTCTGCTACTACTTTTCAATAGTTATCCATCTATAATCTAGTTCTTCGGGAGGCGATTAGTGAGTTATGAAATTATTATAATCAGGCATTGCAGGATCAATTGAAACTTACCAAGCTTTCGACGGTGATTTGAAGAGAAAAGCTGAGAGAACTATAAAAAATGCCAGAGAAATTTGCGCTTCGAAATCGGTAACAATTGAGTTTGAATTTCTCGATTTAGCATGCCTCGATCGTTTGAAGCTCAAATTGAATGAATGCAAGCTTGCAATGATATAATCGAATCTGATCCAATTGTGTGAATCAGTAACGGAGAAAACAGAAATCGTGTAGAACGTACAGGTTGAACATCTGTAATGAACAGAAAGCAATTTCGAATTGGAGTTTTAATTGAATAGAATTGAATTGCAGGTTTGTGATGTTGAATTTGAGGTTGAAGAAGGAGATGCTAGGTATGTACTGTGCGAGGCGGCGATTAAGCACCGGGCTTCAGTGCTCGTGGTAGGAAGCCGTGACCATGGAGCTATCAAAAGGTACTTTCTCCAAAACACAATATTGGTTATTTATTTTTATTTTGACCAAATATCAATGAAATCCTACAATAATAATTAAAACTTCTATGCTCCATCTAAATTGCAGGGCGTTGTTAGGGAGTGTGAGTGACCATTGCGCCCATCAGGCTCCTTGCACCGTCATGATTGTCAAGATCAACCATCCTACAATCACAAAGGCCCTAAAATAGATCAATTTCTATCTTCCTTCAAACTTATATGTATATCGTCTTTGTAAATTGTATATGTTTCTACCTTCAACCTGAGCGAATTATATCATGAAAAATCGGATCTGGTTGGCAATGCGAATGCGAATTTT ATGGCGGCACCAGCATCAAAGCCAGTGATGGTAATTGGAGTCGACGACAGCGAATGTGCAATCGCCGCCCTCGAATGGACGTTGGACCGATTCTTCTCTCAAACGATAGGATTACATCCGTTCAAGCTCGTCGTCGTTCACGTCAAACCATCTCCGGACGTCTTCGTCGGCTTCTCTGGATCGGGAAGCATTGCAGGATCAATTGAAACTTACCAAGCTTTCGACGGTGATTTGAAGAGAAAAGCTGAGAGAACTATAAAAAATGCCAGAGAAATTTGCGCTTCGAAATCGGTTTGTGATGTTGAATTTGAGGTTGAAGAAGGAGATGCTAGGTATGTACTGTGCGAGGCGGCGATTAAGCACCGGGCTTCAGTGCTCGTGGTAGGAAGCCGTGACCATGGAGCTATCAAAAGGGCGTTGTTAGGGAGTGTGAGTGACCATTGCGCCCATCAGGCTCCTTGCACCGTCATGATTGTCAAGATCAACCATCCTACAATCACAAAGGCCCTAAAATAG ATGGCGGCACCAGCATCAAAGCCAGTGATGGTAATTGGAGTCGACGACAGCGAATGTGCAATCGCCGCCCTCGAATGGACGTTGGACCGATTCTTCTCTCAAACGATAGGATTACATCCGTTCAAGCTCGTCGTCGTTCACGTCAAACCATCTCCGGACGTCTTCGTCGGCTTCTCTGGATCGGGAAGCATTGCAGGATCAATTGAAACTTACCAAGCTTTCGACGGTGATTTGAAGAGAAAAGCTGAGAGAACTATAAAAAATGCCAGAGAAATTTGCGCTTCGAAATCGGTTTGTGATGTTGAATTTGAGGTTGAAGAAGGAGATGCTAGGTATGTACTGTGCGAGGCGGCGATTAAGCACCGGGCTTCAGTGCTCGTGGTAGGAAGCCGTGACCATGGAGCTATCAAAAGGGCGTTGTTAGGGAGTGTGAGTGACCATTGCGCCCATCAGGCTCCTTGCACCGTCATGATTGTCAAGATCAACCATCCTACAATCACAAAGGCCCTAAAATAG
BLAST of CSPI07G17430.1 vs. Swiss-Prot
Match: USPAL_ARATH (Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2) HSP 1 Score: 59.7 bits (143), Expect = 3.6e-08 Identity = 42/140 (30.00%), Postives = 65/140 (46.43%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. Swiss-Prot
Match: Y2624_MYCTU (Universal stress protein Rv2624c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2624c PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 3.4e-06 Identity = 46/160 (28.75%), Postives = 76/160 (47.50%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. Swiss-Prot
Match: Y2624_MYCTO (Universal stress protein MT2699 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2699 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 3.4e-06 Identity = 46/160 (28.75%), Postives = 76/160 (47.50%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. TrEMBL
Match: A0A0A0KAW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397000 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 1.8e-91 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. TrEMBL
Match: A0A0A0K987_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397010 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 5.6e-48 Identity = 105/158 (66.46%), Postives = 118/158 (74.68%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. TrEMBL
Match: A0A0A0K632_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397020 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 5.8e-45 Identity = 97/160 (60.62%), Postives = 119/160 (74.38%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. TrEMBL
Match: A0A059AYI3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01151 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 3.8e-44 Identity = 97/161 (60.25%), Postives = 118/161 (73.29%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. TrEMBL
Match: F6HZ39_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00290 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 4.1e-43 Identity = 93/158 (58.86%), Postives = 113/158 (71.52%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. TAIR10
Match: AT2G47710.1 (AT2G47710.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 161.4 bits (407), Expect = 5.0e-40 Identity = 86/160 (53.75%), Postives = 105/160 (65.62%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. TAIR10
Match: AT1G09740.1 (AT1G09740.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 97.4 bits (241), Expect = 8.9e-21 Identity = 63/167 (37.72%), Postives = 90/167 (53.89%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. TAIR10
Match: AT3G62550.1 (AT3G62550.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 85.9 bits (211), Expect = 2.7e-17 Identity = 55/156 (35.26%), Postives = 85/156 (54.49%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. TAIR10
Match: AT3G58450.1 (AT3G58450.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 83.6 bits (205), Expect = 1.3e-16 Identity = 55/171 (32.16%), Postives = 86/171 (50.29%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. TAIR10
Match: AT5G49050.1 (AT5G49050.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 78.2 bits (191), Expect = 5.6e-15 Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. NCBI nr
Match: gi|700189703|gb|KGN44936.1| (hypothetical protein Csa_7G397000 [Cucumis sativus]) HSP 1 Score: 343.2 bits (879), Expect = 2.6e-91 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. NCBI nr
Match: gi|659101384|ref|XP_008451577.1| (PREDICTED: universal stress protein A-like protein isoform X3 [Cucumis melo]) HSP 1 Score: 305.8 bits (782), Expect = 4.7e-80 Identity = 152/171 (88.89%), Postives = 158/171 (92.40%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. NCBI nr
Match: gi|659101380|ref|XP_008451575.1| (PREDICTED: universal stress protein A-like protein isoform X1 [Cucumis melo]) HSP 1 Score: 298.9 bits (764), Expect = 5.7e-78 Identity = 153/183 (83.61%), Postives = 159/183 (86.89%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. NCBI nr
Match: gi|659101386|ref|XP_008451578.1| (PREDICTED: universal stress protein A-like protein isoform X4 [Cucumis melo]) HSP 1 Score: 295.0 bits (754), Expect = 8.2e-77 Identity = 149/171 (87.13%), Postives = 155/171 (90.64%), Query Frame = 1
BLAST of CSPI07G17430.1 vs. NCBI nr
Match: gi|659101382|ref|XP_008451576.1| (PREDICTED: universal stress protein A-like protein isoform X2 [Cucumis melo]) HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76 Identity = 150/180 (83.33%), Postives = 157/180 (87.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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