CSPI07G17060.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTCACTTTAAGGTTAAGAGACTGCAGTCCTTGTTCGTCTTCTCCTAATGCCCTAGCTTCTCTCAGTTCCATTTCCTCTTCAACCTCTCATCACATTTCATTTCCAATTTTCCGTTCGATTTGGCCCTAAATTCTGCTATACTGCTCTTTGCTTTTTTTATTTCGACGGAAAATTGTTGATATTTAGAAGAAGAACGCTTGGTGAGGGTCATTTCTTAAGTAATTCTTGAAGAAGATAGTTGCTGAGGTAGAGCTTGGCTTCTAAATCTATTATTTGATTTTTGATTGCCCGTCTTCGTTTTTATGGCCTCTCTATCTCAAATTATAGTGAAATCTGAGTTCCGTTTTCACGTTTTTGTATTATTCTTTTGGTTTTTTTTGTTAACAATGGTATTGAAATTTTCCGAACTGAGTTTCGACTCTAATATTTGAAGTGGGTTTTGAATTATGATTTTTGTTTTAAAGCATGTGAAAAGAAGGATGAGAAGGCATTCTTCAGATCATGATGCTACTGGTTCTAGAATTTGATATGTAGTTTGTTTTGATTAATTGGACTGTTACTTGGAGGATATACTGAACTTGAGTGAATTTTATATGGATATTCATGTGTATGTGGACTAACTTGCCCTTATCTTAACAATCTCAGGACAAGCCATCCTACACCACTTAGCAAATTAAAGTTATAAAATTTTAGCATAAGTAGGTGTCCATTTGAGATTTCATTAGCCTTATCTTATTGAAAGTCTGAAGACGGTGATGTTGGAATCCATAAATCTTAGTTCCAAATCTTTTGGCTTCAGTTATATTTTCTGAATGGAAGTATCATACGCCTTTGCTGATGAACTACCCTCTCAGTTTTATGGAAAGGGGAGGGCGGCAATGGTTATTCATTTTTTTTAAAGTGGGTTTTAGTTTATTGATTCTGTGGGGAGATCGGATTTGAGATTGGTAGTTAACGCCTAAAGTCAACCTTTAAGGGTGGCCATCTTCACAAATTGGTAGTAGCATTTACTTTTGTAGTTTATGGTCTAAGGCACCAAGCTTTGGTTGTGGATAGTTTATAAACTTGGGATGCAGTAAGTTTTTTTTTCCTAAACAAACCTGAAACTGAACTTTTCCTAAAATAAGTCTAATGCTCTAAATACAAAGAAACAAATGAGCAAAAATGCATGAATAATGGAACCTTGAGATCAACAGATACACCCGGATATCTCAATTAGGTTGACACATCCATAGCACCCTCATCACATCCCAATACAAATGAAATCCTCTAAAATTCATATAAGGTTGAAATAACACTTCCTTGAACCACTAAAAACCTAATTCTGAACATGGATTCATTCCTTTTGTTGTGGTGTTCTGATCCGAGTTGGAAAGATGTTCATCGCTTTCTTGAAGCACTATAGGTTGTGAACAACTTGCATTTTAGGAGGCCTCTATATGATGTGAATTGGAGATATGTGAGCTCTCTTACATTTTATTTTTCAGTCAAAGAAAGCATTTAAGATCAGAGTTGATGTCTCTCTTATGGATTGCATTAGCCATATTGTTTTTTCTTCTACTTTTTTTCTAAAGGAACATTTGATCAAAAATAAAGAGATGGGGTTGGTTTCTAGCCTATAACCTATAAGGTGAGCTATATGTGCCTAAGCATTTGAGCAAGCATGATGGCTCATTAGAAGGTTACATTTTGAAGATTGGGAAGTTCTTTTTGTGATGAAGTAGGGAGAAGAGGAAGAGACAAACATATTGAGGGAGAGTATCTGCTCAACCTACACCCCTAGCCCCTAGGTTAATGTAGTTACAAGATCAATGTAAATAAAGACTAAAGAATGTAATTAATTAAATACTTGTCATTAAATCAAGTAAATAGCTATTACTTGATTCATAATTTAGTTCAACATCCCCCTGCTAGCGAATATGCCTTTGTTGGACAATGAGCTTAGTACCCAAAGGAGATATTTCTCTTCAACTTCCTTCCTTTTCCCATTTGGTTCCTTGTGTTGTGAGGGAAGGTCCAAACATATTTTTGGGAGGATCATTGGGTAGGGGATAAATCCCCTCTCTTATGCTTTTCTTTGGTTATATCATTTGACATCTTTTAAAAACTCTCTTGTGTCAGTTTCTTTCTCCTTTGGTTTTCATTGGTTGTTGTCCAATAGAGAAACAACGAAGGTAGCCTCTCTTCTCTTTTTGATTGAGGGTTTTAACTTTAGGCTTGGGAGACAGGATGTTTGTGTTAAGAATCCTAATCGCTTAGAAGGTTTCTCTTGTAAGTTTTTCTTAAGGATCTTATTGGATTCCTCTCCTGATGTCAAGACTATCCTTGATGTTTTGTGGAGGATTAAGAGTTTGAAGGAACTCAAGTTTTTCTCTCTTGACAAGTTTTGCTCGATCTTGTGAATACTATGGATAGGTTTTTGAGAAAGATGGCTTCATTAGTGGGTTCTTTTTGTTGTATCCTTTGTGGGGAAGTTGGAGGAAAACTTGGATTACCTTCTTGCTTCTTTCAGGAGTTTGATTTTGCTTACTTGTCAAAGAGATGTTTGGTTGATGATCGAGGACAAAATTCTTAAACCTTCTAGTAGAAATGAAACGTCTGTAGGAACTAGTAAATAGCTGTAAATGTGAGCTCACGACAATTTCAAACTAAGACGGTTTCTAACCGCTACTTCTCTAATTTTCTTTATGAGATATGATAAGAAAAATATTTATTCGTAACATCGAAGGAGCTGCTCATCAATTGTTAATTCTTGATCGACCTTGCTTTCTCCTCTTTTTTTTGTTTATTTTTTATTCTTAATTACAAAAGCTTTTAATAATTCCCCCACCCACCCACACATAGACATAAGGCCTCAATTTTCATGTTTACAAGTAGCTTATAACACTTAAGTTGTAGTGAGAATTCTCTTAGTTCTTACTGGAGTTATATTTTTTAGACTAATCAGCAATTTTATAACTTGAGAAGTTAAATTGAAGCTTTTGATGGATGTTACAAACTCTGTTTCTTGCATTTATATCAGAACTATGGAGGACACTCAGCAAACAGAGGATACATCATCTGGAACTGTCCCAGATAAAGCATCTCAAGAGAATCATGAAAGTCGTGATGAAATGCTTTCAAGGCATAGGTAAATTGAAATTTTGTCATCTTGACTTGCATCTGTGGCTTTTCATTAATGATATTTTCTCCGTTTTTCTTTTTATGTATGGCCTGTTGTTTCATTGTTTGCTGCCAGTGGTGTATAATATAATTGGTGATATTGTTGACTTTTGCATTTTGCGCCATATTTTCTGCTGCGACTTCAAGTGCATTGTTAACCGTTTGTGTATATGGTGCTCGTAGAATTTTCATTTATTGTTATTCATGTTATTATATAGCTACTGCATCTTTGTGCAGGAAAGAGATATCTCAGTTGCAGAACAAAGAAATTGAACTTAAAAAGGCAGCAGCTAGAGGTAGCAAAGCTGAACAAAAAGTGAAGAAAAAACAGGTGGAGGAAGAGATATCTCAACTTTCTGTGAAGCTAAAAAAGAAACAGGCCGAAGAACTTGCGTCCTTAGGCTTTAGTAACAGTAATGGAAATGAAAAAAACATCGACAATCTAGTGAAGGCCATAGCTGGGGTATCTATGGCAGCTCAGTCCGATCATTCAAAGCCGAGCAAAAGCACAAGGCGTAAAGAGAAAAGGGCTCAACAAGAAGCCGAAAGAGATCGAAGAATTGAAGAGGAGCAAAGCAACATTGTGAGTGATAGAATGATCGAAAATGAACATTTGGAAAAGAAGCTCGAACCTCTTGGCTTGACTGTCAACGAAATCAAGCCAGATGGACATTGCCTCTACAGGGCAGTTGAAAACCAGCTAGCCTACCTTTCAGGAGGTTCGTCTCCATATAATTACCAACAACTTCGGGAGATGGTAGCAGCTTACATGAGAGACCATTCAACTGATTACATGCCATTTTTCCTCTCGGACAATGGCGTAGAAGGCAACTCCAACAGTTCGTTGGCTGAAAGGTTTGAAAACTACTGCAAGGAAGTTGAGTCAACTGCAGCATGGGGAGGGCAGCTGGAACTTGGTGCTTTAACACATTGCCTTAGAAAACATATCATGATATTTTCGGGATCGTTCCCTGATGTGGAAATGGGGAAAGAATACAAATCTGAAGGGGTAATAAACTCAAGTATTAGGTTGTCTTACCATAAGCATGCCTTTGGACTTGGGGAGCACTACAATTCTGTGGTTCCTGTATGATGATGAAGTTGGGTGGTATAATCATGAAGGGCCACTTTTACTTTGGCATTTATTCTGTTATGCAATATCTTTTTTGAGCCTCGAGTTTGTACCTAAAGGACAAGGGAGAAGGGTATGCCAAAAAAAAATATAATGTTCTTCTTTTTGTTTCCTTCCTTAGATATTTAGCTTTCTTTCACATTTATTCTTCAATTTACCGAATCCAATTCTTCTGTGTTATCTTATAACACTTTCGTTTGCTGTTTTATCTATTGTTTTTTATCTTCTGTTGCACAAG ATGGAGGACACTCAGCAAACAGAGGATACATCATCTGGAACTGTCCCAGATAAAGCATCTCAAGAGAATCATGAAAGTCGTGATGAAATGCTTTCAAGGCATAGGAAAGAGATATCTCAGTTGCAGAACAAAGAAATTGAACTTAAAAAGGCAGCAGCTAGAGGTAGCAAAGCTGAACAAAAAGTGAAGAAAAAACAGGTGGAGGAAGAGATATCTCAACTTTCTGTGAAGCTAAAAAAGAAACAGGCCGAAGAACTTGCGTCCTTAGGCTTTAGTAACAGTAATGGAAATGAAAAAAACATCGACAATCTAGTGAAGGCCATAGCTGGGGTATCTATGGCAGCTCAGTCCGATCATTCAAAGCCGAGCAAAAGCACAAGGCGTAAAGAGAAAAGGGCTCAACAAGAAGCCGAAAGAGATCGAAGAATTGAAGAGGAGCAAAGCAACATTGTGAGTGATAGAATGATCGAAAATGAACATTTGGAAAAGAAGCTCGAACCTCTTGGCTTGACTGTCAACGAAATCAAGCCAGATGGACATTGCCTCTACAGGGCAGTTGAAAACCAGCTAGCCTACCTTTCAGGAGGTTCGTCTCCATATAATTACCAACAACTTCGGGAGATGGTAGCAGCTTACATGAGAGACCATTCAACTGATTACATGCCATTTTTCCTCTCGGACAATGGCGTAGAAGGCAACTCCAACAGTTCGTTGGCTGAAAGGTTTGAAAACTACTGCAAGGAAGTTGAGTCAACTGCAGCATGGGGAGGGCAGCTGGAACTTGGTGCTTTAACACATTGCCTTAGAAAACATATCATGATATTTTCGGGATCGTTCCCTGATGTGGAAATGGGGAAAGAATACAAATCTGAAGGGGTAATAAACTCAAGTATTAGGTTGTCTTACCATAAGCATGCCTTTGGACTTGGGGAGCACTACAATTCTGTGGTTCCTGTATGA ATGGAGGACACTCAGCAAACAGAGGATACATCATCTGGAACTGTCCCAGATAAAGCATCTCAAGAGAATCATGAAAGTCGTGATGAAATGCTTTCAAGGCATAGGAAAGAGATATCTCAGTTGCAGAACAAAGAAATTGAACTTAAAAAGGCAGCAGCTAGAGGTAGCAAAGCTGAACAAAAAGTGAAGAAAAAACAGGTGGAGGAAGAGATATCTCAACTTTCTGTGAAGCTAAAAAAGAAACAGGCCGAAGAACTTGCGTCCTTAGGCTTTAGTAACAGTAATGGAAATGAAAAAAACATCGACAATCTAGTGAAGGCCATAGCTGGGGTATCTATGGCAGCTCAGTCCGATCATTCAAAGCCGAGCAAAAGCACAAGGCGTAAAGAGAAAAGGGCTCAACAAGAAGCCGAAAGAGATCGAAGAATTGAAGAGGAGCAAAGCAACATTGTGAGTGATAGAATGATCGAAAATGAACATTTGGAAAAGAAGCTCGAACCTCTTGGCTTGACTGTCAACGAAATCAAGCCAGATGGACATTGCCTCTACAGGGCAGTTGAAAACCAGCTAGCCTACCTTTCAGGAGGTTCGTCTCCATATAATTACCAACAACTTCGGGAGATGGTAGCAGCTTACATGAGAGACCATTCAACTGATTACATGCCATTTTTCCTCTCGGACAATGGCGTAGAAGGCAACTCCAACAGTTCGTTGGCTGAAAGGTTTGAAAACTACTGCAAGGAAGTTGAGTCAACTGCAGCATGGGGAGGGCAGCTGGAACTTGGTGCTTTAACACATTGCCTTAGAAAACATATCATGATATTTTCGGGATCGTTCCCTGATGTGGAAATGGGGAAAGAATACAAATCTGAAGGGGTAATAAACTCAAGTATTAGGTTGTCTTACCATAAGCATGCCTTTGGACTTGGGGAGCACTACAATTCTGTGGTTCCTGTATGA
BLAST of CSPI07G17060.1 vs. Swiss-Prot
Match: OTU6B_DANRE (OTU domain-containing protein 6B OS=Danio rerio GN=otud6b PE=2 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.4e-37 Identity = 111/306 (36.27%), Postives = 163/306 (53.27%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. Swiss-Prot
Match: OTU6B_CHICK (OTU domain-containing protein 6B OS=Gallus gallus GN=OTUD6B PE=2 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 4.5e-36 Identity = 103/292 (35.27%), Postives = 160/292 (54.79%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. Swiss-Prot
Match: OTU6B_HUMAN (OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.0e-35 Identity = 104/296 (35.14%), Postives = 165/296 (55.74%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. Swiss-Prot
Match: OTU6B_XENTR (OTU domain-containing protein 6B OS=Xenopus tropicalis GN=otud6b PE=2 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 7.2e-34 Identity = 99/298 (33.22%), Postives = 160/298 (53.69%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. Swiss-Prot
Match: OTU6B_MOUSE (OTU domain-containing protein 6B OS=Mus musculus GN=Otud6b PE=1 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.4e-32 Identity = 101/296 (34.12%), Postives = 161/296 (54.39%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. TrEMBL
Match: A0A0A0KAR3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394600 PE=4 SV=1) HSP 1 Score: 601.3 bits (1549), Expect = 7.0e-169 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. TrEMBL
Match: M5X320_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008763mg PE=4 SV=1) HSP 1 Score: 459.1 bits (1180), Expect = 4.3e-126 Identity = 243/324 (75.00%), Postives = 286/324 (88.27%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. TrEMBL
Match: A0A166IN87_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_003965 PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 1.2e-125 Identity = 245/323 (75.85%), Postives = 283/323 (87.62%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. TrEMBL
Match: M5VL87_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008753mg PE=4 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 1.6e-125 Identity = 242/324 (74.69%), Postives = 287/324 (88.58%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. TrEMBL
Match: B9I9W0_POPTR (OTU-like cysteine protease family protein OS=Populus trichocarpa GN=POPTR_0014s12860g PE=4 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 4.0e-124 Identity = 238/322 (73.91%), Postives = 281/322 (87.27%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. TAIR10
Match: AT3G62940.2 (AT3G62940.2 Cysteine proteinases superfamily protein) HSP 1 Score: 403.7 bits (1036), Expect = 1.1e-112 Identity = 226/331 (68.28%), Postives = 271/331 (81.87%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. NCBI nr
Match: gi|778727902|ref|XP_011659337.1| (PREDICTED: OTU domain-containing protein 6B [Cucumis sativus]) HSP 1 Score: 601.3 bits (1549), Expect = 1.0e-168 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. NCBI nr
Match: gi|659101483|ref|XP_008451627.1| (PREDICTED: OTU domain-containing protein 6B [Cucumis melo]) HSP 1 Score: 585.5 bits (1508), Expect = 5.7e-164 Identity = 308/319 (96.55%), Postives = 313/319 (98.12%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. NCBI nr
Match: gi|1009174548|ref|XP_015868399.1| (PREDICTED: OTU domain-containing protein 6B-like [Ziziphus jujuba]) HSP 1 Score: 459.5 bits (1181), Expect = 4.7e-126 Identity = 242/322 (75.16%), Postives = 282/322 (87.58%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. NCBI nr
Match: gi|596012999|ref|XP_007218692.1| (hypothetical protein PRUPE_ppa008763mg [Prunus persica]) HSP 1 Score: 459.1 bits (1180), Expect = 6.1e-126 Identity = 243/324 (75.00%), Postives = 286/324 (88.27%), Query Frame = 1
BLAST of CSPI07G17060.1 vs. NCBI nr
Match: gi|1021053531|gb|KZN11309.1| (hypothetical protein DCAR_003965 [Daucus carota subsp. sativus]) HSP 1 Score: 457.6 bits (1176), Expect = 1.8e-125 Identity = 245/323 (75.85%), Postives = 283/323 (87.62%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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