CSPI07G16910.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAAGCTGCTCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCCTCCTGGCAGCAGCCACCATTCTCACACGTCTTCTCTTTTTCTCAACAATGGCTAACAAACCAGTCAAGTATTTCGTGGTATTTTACTTTACTTCATCTCTATCTATCTTACACTCCTATTCTGATTTGAGAATTATTCTGATTAATTCAAATGAAATATAGGTCGATGCTTTCACTGACTCCGCGTTCAAGGGAAATCAAGCGGCTGTTTGTCTTTTGGAGAAAGAAAGGGATGAGAAATGGCTCCAAGATTTGGCGGTTGAGTTCAATATCTCCGAAACCTGTTATTTAATTCGCATAAACGATGAAGAAGGGACTGATGATTCGCTCAAGCCCCCCTTGTTTAGCCTTAGATGGTTCACTACTGTTGCTGAGGTTTTTCCTTACAACGAATGCTCTGATTCTGTTTGATTAAATTTCTGAAACGACGTATTTTGGCCTATTATTTTATCAACCACCTTTTAGTTTCTTCTTTATTACACATCCTTGCTTGTCTGTGCGACTGAATGAAGGTGAAAAGTTGCAGTATTACCACTCAACTTGTTGGGTTTTTAGTAAAATATTAGAAGCGCAGATGCGTCACATTGAAAAAATTCAAAAGCTCAAAACACTATACAAGGCGCTTATTCTTTTGGTTTCAAAAAGGTGTCCCAGTTGTGCTAAGTCTAGTTAACATACCTTTTGTATACTTTAGTTTGAGAGTGGGAAAATGTTGTAAGTAGTATACGAGTAATTTGGGTCTAGAGAATTTTTTTTTGTGTGGTTATAACACAAGTTTCATAAATGTTTCAAAAGTACCCTGGGGAAGTAGAATTTAGAATTCTTAAGAATTCCGAATGGAAAACAAGACTTAATGATTTTGTTGTGGTCCAATTATTCATTCTATGTCATTGCTACACCATTTCATATCACTTTTGCATACAAAACTATAAAGTACTTCTACTGTAAGGTAATTTTGAGACATTAGTGAAAGTCCGTGAGTAATATTGTAACTTTTTTGAAATTATAGGAATATTTTTTAAACAAATGAAATAGTTTGGTTGATGTAAATCTTGTTGTTTCTGATTAAGACAACTTTTTTTACAGGTAGAGCTTTGTGGTCATGCAACATTGGCAGCTGCACACGTACTTTTCTCAACTGGTTTAGTAAATTCAAGCATTATTGAGTTTTCCACACGTTCAGGAATTCTAGCTGCTAAAAAGGTTCCTGATGTCAAGCAACTTGGGTTTTCAAATGTTCATAACAATGGTAAATCAGAAGATAGCTTCTTTATTGAATTGGATTTTCCAGCTATCCCGACGCTTGAACTCAATTCTACTGCTGATGTTTCTTTAATCTCCAAAGTCTTGAATGTTGCTTCTATAGTTGACATAAAGATGTGTAACATCGATTTCAGTGATCTATTGGTAAGTAAGCCCCTCATTTATCATTGATGTTTTGTTACTAACTCTACTTTTCATTCTATAAGATGAGAAAATTGGTGGATACTTTAGATCACGAGTTTCTTTTCGTGCCTGAGTGAGCAGAGTTCAGCCAATCACTCATGTCTCCACTTGTTTTACTCTTAAAAAAGGGAATATTTTCGTATTGAGAATTATTCACATCTGTCATCTACATATTCTAAAAATATGGAACTCTTTTAAAAGCTCTTTGGAGAAGCCTAGACTTTGCTCCTTTGGACAAATCTCTCAGCCTAAACTTGTGTGGAAATCAACTACCTGCCTTCTATTGTTTCCCTGTTCTTCTGACTATTTTTTCCCCCAGGTATCATTTCGAAATGTATTCCACTAACACAAACTTTGATGCACGTCGAGGATTCCTGTTTCTATCAAGAAATGGTGATTTCTTTGATAGAAATGAAAGAATGCAAAAGGCTGACAAAAGGCCGGCCTACAAAAAATTAAGCCAAATGTGACCTAATAAGTAAGGAAAAAAAGGCTCAAATCCATAAGAACAAGGCCTAACAAATACTTTCAAAGTCTCGAAACACGCCTCCAAAGAGAGCCATTTAATCTAGCTAGGAATTCAATCTCCTTCAAAGACCTCTTGACGCCAAAAGATTTTATTGTCACTCTTAATCATGATACTCGATGACCATAATGCAGCAAAAAGAAAAATAGCATTTCAAATAACACTACCCTCATCCTTGAATGGATATCCTCTTCCATCAATATCATAAGCAACATTACCTAATCCCTATCATAGCACACTCAAGAAGTCTCGTTTCCCTTTCAAAAAACAAAAGTTGCCTGGAAGTGATATAAATATAAATACTTTAGAGAGGGCTGGTATTCTCTCCCTTATCCTGTTACTATCTATCACGCCAAAAGCATAAGCATTGTATACTATTTCCCTAACAACATTCCCTGCTTACATCATTCCGATTTGTCTAACTATTTGGTCGAGGTTGAATTTCTTTCTTTGCTCCATCTTGTGTAATGACTTGGTCGAGGATGAATTTCTTTCTTTTCTCCATCTTGCTTAACGACAATTAATTTGGGGCCTAAACGATCCCAAATTCTGCTAATCAACTAGGCTATGTAAACGAGATTAAGGGGCTCACATTTTGGTTAAGTAGTGTGTTAGCATCTCGAGTTAATCTGTTAACTAATGCAACATTTTGCAGGTTGTTCTTCCTTCAGAAAAAGACGTAGTAGATTTTCAACCTAACATTGATGAGATAAGAAAGTTACCCGGAAATGGAGGGGTAATCATAACTGGAGCATCCCCTACTGAGTCGAAATTTGATTTTTATAGTCGTTACTTCTGTCCCAATTTTGGGATCAACGAGGTATTGAATGCTCAATCTTCCTCTAAAATGTTATAATGTTGATAATATAGTTTAGTCCTTTCTTCCATGTTTATGAGCAATTGCGTTAAAATCCACTTTTAGTCTTTAGATCCTGAATTTCAATCAAAGTAACAGTTCAGTCATTTTACTTTGACATGTAATGATCCTTTCAAGTTTGTAACGATTTTGTTTCTAAACTTGTATAATTTAGTCCATTTACTTTAAAATCTGCAACAAATTAGCCCACATTATGAAAATTATTGTTAAGATTTATAAAATTTTCTTAAATAGGAAGATCAACAAACTAACTAGAACCCCAATATATCTATAAGCATCAAAGCCTAAATACTTAAATGGCTTAAATAATAAAAACCGACATTTATTTTTTATCGAATGTGTTCTAGTAGGAATTAAATTTTTATAAATATAAAGTAGAAAGACTAAATTGTTACAAAATTGAAGTTGCAAGGATTAAAGCATTACGAATCAAAAATAGGGACTAAATTGTTTCCCTCGTGAAAGTTTAGAGACCAAAACTGTTTCTTAAGATAGTTGTTATGTGAATTGAGCATCAAATCAACTATGGAGGCATTGGAAATCTCAATGATGTTCTTCCAAGTAGTTTCAGTTTGTATGTTCTTTACAAACATCTTAAATGTTTGGTGTCTTTGCATATTCAGGATCCTGTATGTGGTAGTGCACATTGTGCCTTGGCGGTCTACTGGGCCAAAAAGTTGGGCAAATCTGATTTTGTTGCTTATATGGTACTCTCTCTTACCTATCAACTTATTTTCCAAGATGCTCATGGATAACCTTATCTCTTCCTTATTTATTCATACATTAAATCAAAACTATAACTGATGAACAGTCTTTTATATACTATGAAAAAGTACCCTTGAGGACTTAAAAAGGTAGTTTGAAAGCATTGAAGAGGGAAAAATATGAAGGAAACTTTATTGACTGAAATAGACTTAAAATGGATATGGATGTGTATGTAATTCTACACTAAGCATATAACTTCTCTTTAATGAAATAGTAAACTGTGGAATGTTCTTTTCAAACCCAAACTAATTTAGAAACATATGAATCGATCATGCTCACCTTATTTTAACTCACTGAAAGATAATGTAGGTTCAGTGGACTTGAGCTCCCTGTTTCCTCAAATTTATGCTATTTATATTATATACGTAAAAAAATCTTATATAGTGTAAATAATATTAGCTAGTCCAATGGTAAATTTGTCTTCTGTTTGAACTCATCCTAGCTCACATAAGCTTCAGAATAGCTCTTATGACTAGGGACGGTTAGATTTTGCTTCTTAAAGAAGTGAACAAAGTTTTGGTTCAATTTAAACTAATAGCTGACCAAACTCAAATGAACTTAACTTAGCTTTAACTCAATTCAATATACATAATTTGAATTGGGTGGTTTGGATTTTTTTTGGCTAGGCATCACCTAGAAGTGGAGTATTGGACGTCCATCTGGATGACCAGAAACAAAGGGTTCTATTGCGAGGGAAAGCTATTACTACGATGGAAGGTGTTGTGTTGGTTTGAAATTTCATTTTCAACCATTGTGTTCAATCCTCTCTCTCTCTTGCTTAAGAACCTTAAATAAGTGCTATTGATTGATCAAATGGTTATTCTCATCCAGCACATTACTTTATTTAGCCCTCGGATTTGCATTTGAAATTTGGATATTGTTCTCTTTTGTATATTGTAATATGGGATCAAAGCTGCTTTGATACCAAAAGGCCAAGAAACTTGTATTGGATCTAAGAACTGTGTTTAACAATAAGACCCAAAATAATTCAACTTGAAGAGCCC ATGGCTAACAAACCAGTCAAGTATTTCGTGGTCGATGCTTTCACTGACTCCGCGTTCAAGGGAAATCAAGCGGCTGTTTGTCTTTTGGAGAAAGAAAGGGATGAGAAATGGCTCCAAGATTTGGCGGTTGAGTTCAATATCTCCGAAACCTGTTATTTAATTCGCATAAACGATGAAGAAGGGACTGATGATTCGCTCAAGCCCCCCTTGTTTAGCCTTAGATGGTTCACTACTGTTGCTGAGGTAGAGCTTTGTGGTCATGCAACATTGGCAGCTGCACACGTACTTTTCTCAACTGGTTTAGTAAATTCAAGCATTATTGAGTTTTCCACACGTTCAGGAATTCTAGCTGCTAAAAAGGTTCCTGATGTCAAGCAACTTGGGTTTTCAAATGTTCATAACAATGGTAAATCAGAAGATAGCTTCTTTATTGAATTGGATTTTCCAGCTATCCCGACGCTTGAACTCAATTCTACTGCTGATGTTTCTTTAATCTCCAAAGTCTTGAATGTTGCTTCTATAGTTGACATAAAGATGTGTAACATCGATTTCAGTGATCTATTGGTTGTTCTTCCTTCAGAAAAAGACGTAGTAGATTTTCAACCTAACATTGATGAGATAAGAAAGTTACCCGGAAATGGAGGGGTAATCATAACTGGAGCATCCCCTACTGAGTCGAAATTTGATTTTTATAGTCGTTACTTCTGTCCCAATTTTGGGATCAACGAGGATCCTGTATGTGGTAGTGCACATTGTGCCTTGGCGGTCTACTGGGCCAAAAAGTTGGGCAAATCTGATTTTGTTGCTTATATGGCATCACCTAGAAGTGGAGTATTGGACGTCCATCTGGATGACCAGAAACAAAGGGTTCTATTGCGAGGGAAAGCTATTACTACGATGGAAGGTGTTGTGTTGGTTTGA ATGGCTAACAAACCAGTCAAGTATTTCGTGGTCGATGCTTTCACTGACTCCGCGTTCAAGGGAAATCAAGCGGCTGTTTGTCTTTTGGAGAAAGAAAGGGATGAGAAATGGCTCCAAGATTTGGCGGTTGAGTTCAATATCTCCGAAACCTGTTATTTAATTCGCATAAACGATGAAGAAGGGACTGATGATTCGCTCAAGCCCCCCTTGTTTAGCCTTAGATGGTTCACTACTGTTGCTGAGGTAGAGCTTTGTGGTCATGCAACATTGGCAGCTGCACACGTACTTTTCTCAACTGGTTTAGTAAATTCAAGCATTATTGAGTTTTCCACACGTTCAGGAATTCTAGCTGCTAAAAAGGTTCCTGATGTCAAGCAACTTGGGTTTTCAAATGTTCATAACAATGGTAAATCAGAAGATAGCTTCTTTATTGAATTGGATTTTCCAGCTATCCCGACGCTTGAACTCAATTCTACTGCTGATGTTTCTTTAATCTCCAAAGTCTTGAATGTTGCTTCTATAGTTGACATAAAGATGTGTAACATCGATTTCAGTGATCTATTGGTTGTTCTTCCTTCAGAAAAAGACGTAGTAGATTTTCAACCTAACATTGATGAGATAAGAAAGTTACCCGGAAATGGAGGGGTAATCATAACTGGAGCATCCCCTACTGAGTCGAAATTTGATTTTTATAGTCGTTACTTCTGTCCCAATTTTGGGATCAACGAGGATCCTGTATGTGGTAGTGCACATTGTGCCTTGGCGGTCTACTGGGCCAAAAAGTTGGGCAAATCTGATTTTGTTGCTTATATGGCATCACCTAGAAGTGGAGTATTGGACGTCCATCTGGATGACCAGAAACAAAGGGTTCTATTGCGAGGGAAAGCTATTACTACGATGGAAGGTGTTGTGTTGGTTTGA
BLAST of CSPI07G16910.1 vs. Swiss-Prot
Match: Y283_BACHD (Uncharacterized isomerase BH0283 OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=BH0283 PE=3 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 9.3e-47 Identity = 116/299 (38.80%), Postives = 169/299 (56.52%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. Swiss-Prot
Match: PBLD2_MOUSE (Phenazine biosynthesis-like domain-containing protein 2 OS=Mus musculus GN=Pbld2 PE=1 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 4.5e-41 Identity = 113/305 (37.05%), Postives = 158/305 (51.80%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. Swiss-Prot
Match: PBLD1_MOUSE (Phenazine biosynthesis-like domain-containing protein 1 OS=Mus musculus GN=Pbld1 PE=1 SV=2) HSP 1 Score: 168.7 bits (426), Expect = 9.9e-41 Identity = 113/305 (37.05%), Postives = 158/305 (51.80%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. Swiss-Prot
Match: Y2770_PSEAE (Uncharacterized isomerase PA2770 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA2770 PE=3 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.4e-39 Identity = 113/296 (38.18%), Postives = 156/296 (52.70%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. Swiss-Prot
Match: PBLD_RAT (Phenazine biosynthesis-like domain-containing protein OS=Rattus norvegicus GN=Pbld PE=2 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.9e-39 Identity = 114/305 (37.38%), Postives = 160/305 (52.46%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. TrEMBL
Match: A0A0A0K7K6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G393450 PE=4 SV=1) HSP 1 Score: 609.4 bits (1570), Expect = 2.5e-171 Identity = 303/306 (99.02%), Postives = 304/306 (99.35%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. TrEMBL
Match: A0A0A0K8X4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390060 PE=4 SV=1) HSP 1 Score: 498.8 bits (1283), Expect = 4.7e-138 Identity = 243/306 (79.41%), Postives = 273/306 (89.22%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. TrEMBL
Match: A0A0A0K566_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G393460 PE=4 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 1.7e-132 Identity = 238/306 (77.78%), Postives = 266/306 (86.93%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. TrEMBL
Match: A0A0A0K5Q5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390070 PE=4 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 5.4e-126 Identity = 233/311 (74.92%), Postives = 265/311 (85.21%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. TrEMBL
Match: V4VVN0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021404mg PE=4 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 4.6e-109 Identity = 202/306 (66.01%), Postives = 243/306 (79.41%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. TAIR10
Match: AT4G02860.1 (AT4G02860.1 Phenazine biosynthesis PhzC/PhzF protein) HSP 1 Score: 336.3 bits (861), Expect = 2.0e-92 Identity = 178/306 (58.17%), Postives = 219/306 (71.57%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. TAIR10
Match: AT1G03210.1 (AT1G03210.1 Phenazine biosynthesis PhzC/PhzF protein) HSP 1 Score: 318.5 bits (815), Expect = 4.4e-87 Identity = 177/306 (57.84%), Postives = 209/306 (68.30%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. TAIR10
Match: AT4G02850.1 (AT4G02850.1 phenazine biosynthesis PhzC/PhzF family protein) HSP 1 Score: 304.3 bits (778), Expect = 8.5e-83 Identity = 168/324 (51.85%), Postives = 212/324 (65.43%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. NCBI nr
Match: gi|778727877|ref|XP_011659334.1| (PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Cucumis sativus]) HSP 1 Score: 609.4 bits (1570), Expect = 3.5e-171 Identity = 303/306 (99.02%), Postives = 304/306 (99.35%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. NCBI nr
Match: gi|659101001|ref|XP_008451377.1| (PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Cucumis melo]) HSP 1 Score: 569.3 bits (1466), Expect = 4.0e-159 Identity = 282/306 (92.16%), Postives = 292/306 (95.42%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. NCBI nr
Match: gi|659101007|ref|XP_008451381.1| (PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Cucumis melo]) HSP 1 Score: 501.1 bits (1289), Expect = 1.3e-138 Identity = 244/306 (79.74%), Postives = 277/306 (90.52%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. NCBI nr
Match: gi|778727753|ref|XP_004148891.2| (PREDICTED: phenazine biosynthesis-like domain-containing protein 2 [Cucumis sativus]) HSP 1 Score: 498.8 bits (1283), Expect = 6.7e-138 Identity = 243/306 (79.41%), Postives = 273/306 (89.22%), Query Frame = 1
BLAST of CSPI07G16910.1 vs. NCBI nr
Match: gi|449436559|ref|XP_004136060.1| (PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Cucumis sativus]) HSP 1 Score: 480.3 bits (1235), Expect = 2.5e-132 Identity = 238/306 (77.78%), Postives = 266/306 (86.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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