CSPI07G16320.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTGCTATTTTGTTTCAACTAAAAAAGACACTTTTCCGCCAAAAGGAAAAAAATGGTATCTCTCCGCTTCCCATTCTCGTTTCCTCAGCCACCAAAGCCCCCCCGTCGTACCTTTCCCCGCCCCTCTTCCGCTGCCGCTGTCGCTGCAGGCGGCGCTGCTGCGGCAGTCGGATTTGTCGCTGCAGCTAGGAACTCGACCAACCCACAAACCCCATTTCTTGAATGCGCATTGAATTTGCTCTTCTCAAGTCATTCATCTCCCTTGTGGGCTTCTCTCTCTCTGGCGGAAAATTCGGCCGCCTCTTCAGTTGTTGATTCCAAGACTGGATTTTCATTTCCCTCTGTCATTGGAGATTCTCAGCAGCTTCTTGGAATTGGGTTGCGAAGAAAAGCCATTTTGGGACTGAAGAACATCAACGTTTATGCATTTGGTATGTTATCGCACATTTCTACTTTTGAGGAGCTTTTGTGATTTGATTTTGGATGTTGAATTTGTGCTGATTTAGCAGATGGGCATTTGTGATCTTCACTGAATTAAGAAGTTTTTATTGTTACTTTCGAAAATAGCATTTATTCGTGACTGTCTAGGGCTTTGGGAGACTGTTTTTGGAAAGAATTTCCTTCTCTTATCCGTTTTTAACAGTGACACTGGATGGCCCAGATATACTTTTGTGTTCTTTTCCAGCTGAAATCATGATTTGAATTTGAAAGGTTTGTATTGTGTAACTTCTTCAGTATTTCTCAAAACAAATCAAACAAAGTGAAGGGAACAAAAGAAAAAAAATCTTTCAAAGTAGATAGGAAAGCAACATAAGATAGATAACTGGTACAAGACAGTGACTCAAATATGCTTTCACTGATTTTTCGTTTTGGAAAAAAATGCAAGATTGTTTTGAAAACCATTTCTAAAAGCAAACCACAGGATTCACCTATATGGAACATAGGCTGCATAGCTCAACCACCTAGGTCGGGTTCGAATTTTCCATCCTGTATATTACTATTGAACTAAAAACGAAGAAGGAGAAGAAGAAGCTAACCACAAGAATCGCCATTATTAGATAATAGACCATAAATTTCATGCTCAGTTTTTGGTTTGTGCTTATTGAAACTGAAGCTTATAAACACTACTTCCACCTATTGATTTTTTTGTTCATTATCTACTTTTTAGGACTGTTTTTAAAAAATCAAGCTAAGTTTGAAAACTTTAAAAGTACTTTTTGTTTCTGAAATTTAGTTGAGGATTCTAGTGTTCAATTCAAAAAGATGAAAACCATAGAAAGAAGCTGTAAAAAAACAAATATAATTTTTCAAAAACTATAAATAAAAAGCCAAATGATAATCAACCAGGCCTTTATTATTTCTCCTATTTAATTTTGAAAAAGGGAAGTGACTGTAATAGAATTTACTAAATGGATAACTGAAGCTACTGTAGTATTTATATCTCTTGAAAAAGTGGGTGTACCTTAGTTCATATAAGCTGAAGTTCATGGCTAATGTGGTTGTTCCATTTCAATCAGATCATCCTTTTTATGATTAAGATAGTAAGCTTGGGCTTGACTGTCTCCAACCCTGTGGGGAGTCATTTTGGCTTCAATAGAAGTCAGAAATGATCTGAGTTTACAACCTTATTTGAACACGATCTTTTCTATAGGTTGTACAACTGTCTTTGAGTTCTAAAGAAATGAACCGAGCTTAGACTTCAAATTTGTGCCAACCTTTCCTTTAACATCCTATTGTTCTAGCTCTGCATTAAGTTTCTTTGTTGAACTGTAATCTATAGAGTTCACAGATTTTACAACATTTGGGAGAACGATGGAATGAACTTCCAATTGAGCAGAAGATGGTGGAAAGGTGAGTGGTTGAGATTTGCCAAGATTCACGATCTACAATATTTGTTATGAGAGAAACTTTTCTGATGCGAACCAATCTGTATGAAATTTCTTAAATCCATTATGTCACTGTGCATATGCTTTTCCGTTTTTGGGTTATTGACATTTTTTCGTCCTAAGCTATCTGTTATTCAAATGAGTGACTGCGTGTAGGTGTTTATGCTGACAATGATGACATAAAGGAATCACTGAGTGAGAAGTATGGGAAACTCACTGTAACTGAACTACAAGAAAAGGACTTTGACAAAGATGTCATGGAAGGTGATATATGCATGACTGTTAGACTTCAAATTGTCTATGGAAAACTGAGCATCCGATCGGTTCGAAGTGCATTTGAAGAGTCTGTTGGAAACCGACTCCAGAAGTTTGGGGGTTCAGACAACAAAGAATTGCTTGACAAGTAAGTCATTCTATGAGTTGTGTGGTTTTTGTTTTCTCTCGGCCATCACCATGTCATTATAACGCTGTCTCTATCATCCCCTACTCCTGTATCCTTATAGCTTTGTTTCTTTGCAGATTCACTTCCCAATTCAAAGACGAGTACAAAATACCTCGAGGATCGGTGATCGATCTCTCAAAAGAACGAGGGCACGTCCTCCGTACAATCAGTGAGATTTCGATCCTTATTAGTTAGTGCAGCAATGTAGGATTGCATCTTATGAAGAACCATTACTCATGCATTTGCTTGGTGTGTTGGATTTTTGTTTTTGAAAAACATCTCACATCTGAATGCATCTGCCAACCAACTAACAAACATTTTACTTTTTAATCTGAATACGGAATGTAATTAAATTCATATGCAGTTGATGGAAAGGAAGTGGGAAGCATCCAGAGCCAACTGTTGTGTAGAGCCATTTTAGATCTCTATATTGGTGAAGATCCATTTGATAAACAAGCCAAAGAAGACGTCAGACAAGCGTTAACTTCTATTCTTCAGAAGTAATAGCCAAAAATACAAAGGGAGAGAAAAATGAGGAGATTGGTGCTTCCTTCTTGTTTTGATATTGCTGATGTTTAAAATGGAGATTTTTTTTGGTCAATTTGCATTGTGCCCTCTTTTAACCTTAATTTCATTCTCTTCTTTTTCTTTTTAGAGAATCGAAATTCTAACTTAGTAATTAATATTGTACAAGTTTTATTGTTTTT ATGGTATCTCTCCGCTTCCCATTCTCGTTTCCTCAGCCACCAAAGCCCCCCCGTCGTACCTTTCCCCGCCCCTCTTCCGCTGCCGCTGTCGCTGCAGGCGGCGCTGCTGCGGCAGTCGGATTTGTCGCTGCAGCTAGGAACTCGACCAACCCACAAACCCCATTTCTTGAATGCGCATTGAATTTGCTCTTCTCAAGTCATTCATCTCCCTTGTGGGCTTCTCTCTCTCTGGCGGAAAATTCGGCCGCCTCTTCAGTTGTTGATTCCAAGACTGGATTTTCATTTCCCTCTGTCATTGGAGATTCTCAGCAGCTTCTTGGAATTGGGTTGCGAAGAAAAGCCATTTTGGGACTGAAGAACATCAACGTTTATGCATTTGGTGTTTATGCTGACAATGATGACATAAAGGAATCACTGAGTGAGAAGTATGGGAAACTCACTGTAACTGAACTACAAGAAAAGGACTTTGACAAAGATGTCATGGAAGGTGATATATGCATGACTGTTAGACTTCAAATTGTCTATGGAAAACTGAGCATCCGATCGGTTCGAAGTGCATTTGAAGAGTCTGTTGGAAACCGACTCCAGAAGTTTGGGGGTTCAGACAACAAAGAATTGCTTGACAAATTCACTTCCCAATTCAAAGACGAGTACAAAATACCTCGAGGATCGGTGATCGATCTCTCAAAAGAACGAGGGCACGTCCTCCGTACAATCATTGATGGAAAGGAAGTGGGAAGCATCCAGAGCCAACTGTTGTGTAGAGCCATTTTAGATCTCTATATTGGTGAAGATCCATTTGATAAACAAGCCAAAGAAGACGTCAGACAAGCGTTAACTTCTATTCTTCAGAAGTAA ATGGTATCTCTCCGCTTCCCATTCTCGTTTCCTCAGCCACCAAAGCCCCCCCGTCGTACCTTTCCCCGCCCCTCTTCCGCTGCCGCTGTCGCTGCAGGCGGCGCTGCTGCGGCAGTCGGATTTGTCGCTGCAGCTAGGAACTCGACCAACCCACAAACCCCATTTCTTGAATGCGCATTGAATTTGCTCTTCTCAAGTCATTCATCTCCCTTGTGGGCTTCTCTCTCTCTGGCGGAAAATTCGGCCGCCTCTTCAGTTGTTGATTCCAAGACTGGATTTTCATTTCCCTCTGTCATTGGAGATTCTCAGCAGCTTCTTGGAATTGGGTTGCGAAGAAAAGCCATTTTGGGACTGAAGAACATCAACGTTTATGCATTTGGTGTTTATGCTGACAATGATGACATAAAGGAATCACTGAGTGAGAAGTATGGGAAACTCACTGTAACTGAACTACAAGAAAAGGACTTTGACAAAGATGTCATGGAAGGTGATATATGCATGACTGTTAGACTTCAAATTGTCTATGGAAAACTGAGCATCCGATCGGTTCGAAGTGCATTTGAAGAGTCTGTTGGAAACCGACTCCAGAAGTTTGGGGGTTCAGACAACAAAGAATTGCTTGACAAATTCACTTCCCAATTCAAAGACGAGTACAAAATACCTCGAGGATCGGTGATCGATCTCTCAAAAGAACGAGGGCACGTCCTCCGTACAATCATTGATGGAAAGGAAGTGGGAAGCATCCAGAGCCAACTGTTGTGTAGAGCCATTTTAGATCTCTATATTGGTGAAGATCCATTTGATAAACAAGCCAAAGAAGACGTCAGACAAGCGTTAACTTCTATTCTTCAGAAGTAA
BLAST of CSPI07G16320.1 vs. Swiss-Prot
Match: FAP1_ARATH (Fatty-acid-binding protein 1 OS=Arabidopsis thaliana GN=FAP1 PE=1 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.8e-81 Identity = 170/277 (61.37%), Postives = 205/277 (74.01%), Query Frame = 1
BLAST of CSPI07G16320.1 vs. Swiss-Prot
Match: FAP2_ARATH (Fatty-acid-binding protein 2 OS=Arabidopsis thaliana GN=FAP2 PE=2 SV=2) HSP 1 Score: 124.8 bits (312), Expect = 1.5e-27 Identity = 70/221 (31.67%), Postives = 119/221 (53.85%), Query Frame = 1
BLAST of CSPI07G16320.1 vs. TrEMBL
Match: A0A0A0KAH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G388440 PE=4 SV=1) HSP 1 Score: 538.9 bits (1387), Expect = 3.8e-150 Identity = 282/285 (98.95%), Postives = 282/285 (98.95%), Query Frame = 1
BLAST of CSPI07G16320.1 vs. TrEMBL
Match: M5VXN6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009406mg PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 6.1e-100 Identity = 205/296 (69.26%), Postives = 239/296 (80.74%), Query Frame = 1
BLAST of CSPI07G16320.1 vs. TrEMBL
Match: F6HI42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0151g01060 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 5.2e-99 Identity = 197/285 (69.12%), Postives = 230/285 (80.70%), Query Frame = 1
BLAST of CSPI07G16320.1 vs. TrEMBL
Match: W9QVM9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025074 PE=4 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 9.8e-98 Identity = 194/290 (66.90%), Postives = 234/290 (80.69%), Query Frame = 1
BLAST of CSPI07G16320.1 vs. TrEMBL
Match: A0A067FZ64_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023433mg PE=4 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 6.3e-97 Identity = 196/286 (68.53%), Postives = 235/286 (82.17%), Query Frame = 1
BLAST of CSPI07G16320.1 vs. TAIR10
Match: AT3G63170.1 (AT3G63170.1 Chalcone-flavanone isomerase family protein) HSP 1 Score: 303.9 bits (777), Expect = 1.0e-82 Identity = 170/277 (61.37%), Postives = 205/277 (74.01%), Query Frame = 1
BLAST of CSPI07G16320.1 vs. TAIR10
Match: AT2G26310.1 (AT2G26310.1 Chalcone-flavanone isomerase family protein) HSP 1 Score: 124.8 bits (312), Expect = 8.6e-29 Identity = 70/221 (31.67%), Postives = 119/221 (53.85%), Query Frame = 1
BLAST of CSPI07G16320.1 vs. NCBI nr
Match: gi|449458494|ref|XP_004146982.1| (PREDICTED: fatty-acid-binding protein 1 [Cucumis sativus]) HSP 1 Score: 538.9 bits (1387), Expect = 5.4e-150 Identity = 282/285 (98.95%), Postives = 282/285 (98.95%), Query Frame = 1
BLAST of CSPI07G16320.1 vs. NCBI nr
Match: gi|659100952|ref|XP_008451353.1| (PREDICTED: fatty-acid-binding protein 1 isoform X1 [Cucumis melo]) HSP 1 Score: 526.9 bits (1356), Expect = 2.1e-146 Identity = 275/285 (96.49%), Postives = 278/285 (97.54%), Query Frame = 1
BLAST of CSPI07G16320.1 vs. NCBI nr
Match: gi|659100954|ref|XP_008451354.1| (PREDICTED: fatty-acid-binding protein 1 isoform X2 [Cucumis melo]) HSP 1 Score: 438.3 bits (1126), Expect = 1.0e-119 Identity = 232/246 (94.31%), Postives = 235/246 (95.53%), Query Frame = 1
BLAST of CSPI07G16320.1 vs. NCBI nr
Match: gi|595793541|ref|XP_007200519.1| (hypothetical protein PRUPE_ppa009406mg [Prunus persica]) HSP 1 Score: 372.1 bits (954), Expect = 8.8e-100 Identity = 205/296 (69.26%), Postives = 239/296 (80.74%), Query Frame = 1
BLAST of CSPI07G16320.1 vs. NCBI nr
Match: gi|296085199|emb|CBI28694.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 369.0 bits (946), Expect = 7.5e-99 Identity = 197/285 (69.12%), Postives = 230/285 (80.70%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
|