CSPI07G08370.2 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G08370.2
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	ubiquitin-protein ligase 1
Location	Chr7 : 6142148 .. 6144956 (+)
Sequence length	822

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGCTCGTCTAGAAATGAAATGGCAAGAAAAGTAAATTAAATGACAATATTAGAAGAAGCTCGGAACGGTTTCACTCACTGGCGCTGCAATGGCCGCTCCGGAGCTAGAAGTTGCAGTTTTTATTGATACTGATTTCGGCACCCGCCTGGCTGTTGCCGTTCCCCCGGACATCGCCGCCGGAGCTTTAAAGAGTGAGCCCAAAAACTGATTAAAAACAACTTCTCTTCCCTTTTCCTCTTCTTTCACTCCGATTACAAATGGCTATGTGGGCGTTTTTCTTTTTCTCTCTTTTATCCGAGGAAAACCCCATTTCAGAAGATTGTTCATTCTATTTGAGGATTTTGACATTTTATCTTTCTGGGTTTTAAAAGAGCTCTACCAAATCCTTTTAGGTTTTTCTTTATGCCTTGTTCAGATTCTGGGTCCTTCCCTATTTTTCTGCATTGATGGCATTTCTGCTGCTTATTTCCAGTTAAAAGTTGCATTTTTCTGTTCATTATGAATATAATATGATTGCTTATATTTATTTTTCTCTGTGTTTGAAGATGTGATTCTTAGGGGTCTTTTTGTTACTTTCCTGTTTCTCGTTTCCATCCTCTTGTTAACAATTTTCGCGAAGCAAACACACTACCAAATGGCCCTGAGGGTCTTGGTTAGGTTCAATGTTTAATGTCTAATGTTCCTGTTTTGAAAACACTTTATTGGTCATTATTTATCGCTCATTCTTCTGAATGGGAGATTTTTCTTATAATTGTATTGTTATAGTTAACTTTCTGTGTTTTCTGTTTTAGTTCCTTTTGTCCTGAGCTTTCCTTTTTGTATTTCCCTAGTCTATTCTTTCAGGCTTCTTTATTAATGTTTTTTTTCTCTCGGGAAAAAGGGCTAATTCTAAGATACGGATCATGGTTTTAATAAGTTTGGATTTGTATGACATTTGGAGTTAGGAAGATTGGGTTTGTAGATATATATATATGTTGAAATTGTAGAAAAGAAGAAGTTGCAAAATTCAGGATTATTACTGTACTATGTGTTTGGTTTGTGAGTTTATATGACTTTCGAAAGTTTGTATGGACGGTGAGTTTCCTCAACTTTCGCTTGTTTAACATGAAATTGTATAGCTTAGCTGGTGGACTTAAGAATTAAAAAACCTGTAGCTGTAGTGTGAGATAAGCAATCCAGGTACCTAACATAAGCTTGGCTTCTGAAGTATGAATTACATAAGGTTAACACGTGACTTGTAAGTCAAAATTTTCTTAATGATTCTAAATGTTTAGGATTGATTTTGAAATGGTTAGGTTAGATTTTGGTGGGTTCGACATTTTTTATGTCCTTGTATTCTTTTACTCGATGAAAGCAATTCTTTCTAGATACTAAGGCTCTAATTTCACTTTCTAAATATCTATTTGTCATGTTTAAAATCATTCTGAACACATGTTTGGAGTTATAGAACCAAACATGAAAGTGACCGACTTTGAGTGATTTTGAATGTAACAAAAGTAATTTTAACCATTTCAAAATCATTTATCCTTAACATTGTTTCTGCACTTGGGACCCTCAGATGTTTAAGTCGAGGATGAAAGGTTTTATTTGCATGTCATGTGGGCTTATGCCACCTCAGATTCAAAGTTGCGTGCATAATGTCTATAATCTATAATGTATTTACTGTTTTGCCTGCTGATTTCAAACTTTTTCCAGGGGAAGTTGAGAGAGTACATTTTAACTGTTTCCCAAGTATAGGAGAGATCAAGGTGGATGGATTCATGGTGTGTTTGTAGATTGTTTTTGTTTGTTCTCATGGTCAACATCAGATTTAAGGCCATTGTTCTAATTTGTGCCATTTCTATTTCTTTAGGTGAAGCAAAACTCGAACTTCTACCATTTGCCCGATACGTTGCTCACGAAACTCACTTCCCGACTGGAAGTGATGCAGTTTCTTCATGTCAAAGCACGGCCTTTGAATGGGTTTATTGAGCCTTGTATACCCAAAAATGCCGATTGTTCCCCCAACCTAAACTATGTCACTTACCCTACAGAAAGACGAGGTTACTTGGGAACTGCCTGCAAGAGTAAAATCAGAATCAATGGCAAGAAACATACTAGAAAAAGGTTCCAAAGGCAGAATTGCTTATCAAGGCTAGTTGGCCGGGGTATCTTAGCCTCGAATACAAAGAGAAAGAGGAAAATAACTAACAAAAAACAGGTTTTAGAGCACATGGAAAAGAATTCTAATACGGAGGGTCTGATAAAAGATGTGGAAAATCACAATGGTTTGATTGATACATTGTCATACCATTGTGTGTCAAATGATGAAGTGAGGACTACAAAACAAAGGTTGGCAAGCTCCTCATCGGTAGAGGCAGCCACGGACAGTGAGTTGTCCTCTGAAGCCATGTCTGTTTCTAGTATCATAAAAAGATATTTTTCGAGCTATGACAGAGAGACCAGCATTTCAAACCAATCGAGATACGATATTACTCGAAGTCAGCCAGGAGAGTATTTGAAGATGAAGAATATGGGAAGAGGCCCAAGCTTGTTACCTTTGAAAGTGCCATTTAAACCATGTCCTCAAAAGGATGAGAGATCTAAGCTTGGGAAAAGGCTGGTGATGGCTTCATATAATCTTGGGATTTCTCCTATCGGGGGAAGGCCAGAAATTTCACTTTGTAATGCTAAAGGTAAAAAGTTTCAAGAAATGATGACTTTAGCTAAAAGTTCTTGTTTTGAGATAAGTGACAGTGAAAATTGAACTTAATTACGAGATTACTTTTGTTTCCATAAGTATATAGCAATATAACGATGAATGTCTT

mRNA sequence

ATGCAGTTTCTTCATGTCAAAGCACGGCCTTTGAATGGGTTTATTGAGCCTTGTATACCCAAAAATGCCGATTGTTCCCCCAACCTAAACTATGTCACTTACCCTACAGAAAGACGAGGTTACTTGGGAACTGCCTGCAAGAGTAAAATCAGAATCAATGGCAAGAAACATACTAGAAAAAGGTTCCAAAGGCAGAATTGCTTATCAAGGCTAGTTGGCCGGGGTATCTTAGCCTCGAATACAAAGAGAAAGAGGAAAATAACTAACAAAAAACAGGTTTTAGAGCACATGGAAAAGAATTCTAATACGGAGGGTCTGATAAAAGATGTGGAAAATCACAATGGTTTGATTGATACATTGTCATACCATTGTGTGTCAAATGATGAAGTGAGGACTACAAAACAAAGGTTGGCAAGCTCCTCATCGGTAGAGGCAGCCACGGACAGTGAGTTGTCCTCTGAAGCCATGTCTGTTTCTAGTATCATAAAAAGATATTTTTCGAGCTATGACAGAGAGACCAGCATTTCAAACCAATCGAGATACGATATTACTCGAAGTCAGCCAGGAGAGTATTTGAAGATGAAGAATATGGGAAGAGGCCCAAGCTTGTTACCTTTGAAAGTGCCATTTAAACCATGTCCTCAAAAGGATGAGAGATCTAAGCTTGGGAAAAGGCTGGTGATGGCTTCATATAATCTTGGGATTTCTCCTATCGGGGGAAGGCCAGAAATTTCACTTTGTAATGCTAAAGGTAAAAAGTTTCAAGAAATGATGACTTTAGCTAAAAGTTCTTGTTTTGAGATAAGTGACAGTGAAAATTGA

Coding sequence (CDS)

ATGCAGTTTCTTCATGTCAAAGCACGGCCTTTGAATGGGTTTATTGAGCCTTGTATACCCAAAAATGCCGATTGTTCCCCCAACCTAAACTATGTCACTTACCCTACAGAAAGACGAGGTTACTTGGGAACTGCCTGCAAGAGTAAAATCAGAATCAATGGCAAGAAACATACTAGAAAAAGGTTCCAAAGGCAGAATTGCTTATCAAGGCTAGTTGGCCGGGGTATCTTAGCCTCGAATACAAAGAGAAAGAGGAAAATAACTAACAAAAAACAGGTTTTAGAGCACATGGAAAAGAATTCTAATACGGAGGGTCTGATAAAAGATGTGGAAAATCACAATGGTTTGATTGATACATTGTCATACCATTGTGTGTCAAATGATGAAGTGAGGACTACAAAACAAAGGTTGGCAAGCTCCTCATCGGTAGAGGCAGCCACGGACAGTGAGTTGTCCTCTGAAGCCATGTCTGTTTCTAGTATCATAAAAAGATATTTTTCGAGCTATGACAGAGAGACCAGCATTTCAAACCAATCGAGATACGATATTACTCGAAGTCAGCCAGGAGAGTATTTGAAGATGAAGAATATGGGAAGAGGCCCAAGCTTGTTACCTTTGAAAGTGCCATTTAAACCATGTCCTCAAAAGGATGAGAGATCTAAGCTTGGGAAAAGGCTGGTGATGGCTTCATATAATCTTGGGATTTCTCCTATCGGGGGAAGGCCAGAAATTTCACTTTGTAATGCTAAAGGTAAAAAGTTTCAAGAAATGATGACTTTAGCTAAAAGTTCTTGTTTTGAGATAAGTGACAGTGAAAATTGA

Homology

[Close]

BLAST of CSPI07G08370.2 vs. TrEMBL
Match: A0A0A0K319_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G122360 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 9.3e-146
Identity = 266/273 (97.44%), Postives = 269/273 (98.53%), Query Frame = 1


Query: 1   MQFLHVKARPLNGFIEPCIPKNADCSPNLNYVTYPTERRGYLGTACKSKIRINGKKHTRK 60
           MQFLHVKARPLNGFIEPCIPKNADCSPNLNYVTYPTERRGYLGTACKSKIRINGKKHTRK
Sbjct: 67  MQFLHVKARPLNGFIEPCIPKNADCSPNLNYVTYPTERRGYLGTACKSKIRINGKKHTRK 126

Query: 61  RFQRQNCLSRLVGRGILASNTKRKRKITNKKQVLEHMEKNSNTEGLIKDVENHNGLIDTL 120
           RFQRQNCLSRLVGRGILA NTKRKRKITNKKQVLEHMEKNS+TEGLIKDV+NHNGLI TL
Sbjct: 127 RFQRQNCLSRLVGRGILAWNTKRKRKITNKKQVLEHMEKNSDTEGLIKDVKNHNGLIGTL 186

Query: 121 SYHCVSNDEVRTTKQRLASSSSVEAATDSELSSEAMSVSSIIKRYFSSYDRETSISNQSR 180
           SYHCVS DEVRTTKQRLASSSSVEAATDSELSSEAMSVSSIIKRYFSSYDRE+SISNQSR
Sbjct: 187 SYHCVSIDEVRTTKQRLASSSSVEAATDSELSSEAMSVSSIIKRYFSSYDRESSISNQSR 246

Query: 181 YDITRSQPGEYLKMKNMGRGPSLLPLKVPFKPCPQKDERSKLGKRLVMASYNLGISPIGG 240
           YDITRSQPGEYLKMKNMGRGPS LPLKVPFKPCPQKDERSKLGKRLVMASYNLGISPIGG
Sbjct: 247 YDITRSQPGEYLKMKNMGRGPSSLPLKVPFKPCPQKDERSKLGKRLVMASYNLGISPIGG 306

Query: 241 RPEISLCNAKGKKFQEMMTLAKSSCFEISDSEN 274
           RPEISLCNAKGKKFQEMMTLAKSSCFEISDSEN
Sbjct: 307 RPEISLCNAKGKKFQEMMTLAKSSCFEISDSEN 339

[Close]

BLAST of CSPI07G08370.2 vs. TrEMBL
Match: D7UAI5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g00660 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.2e-09
Identity = 90/306 (29.41%), Postives = 130/306 (42.48%), Query Frame = 1


Query: 3   FLHVKARPLNGFIEPCIPKNADCSP-NLNY----VTYPTERRGYLGTACKSKIRINGKKH 62
           FLH +A  L G     +  +      N  Y    VT P E + Y   A + K   N  K 
Sbjct: 84  FLHTEASSLGGSDLSSLSNHVTVETRNHTYDGSNVTDPMEPKSYTAIAVRDK---NKSKG 143

Query: 63  TRKRFQRQNCLSRLVGRGILAS-----NTKRKRKITNKKQVLEHMEKNSNTEGLIKDVEN 122
            R+R +R +CL  ++  G+L +      ++RKR   N+          +   G  K +  
Sbjct: 144 RRRRIKRYHCLKAVLW-GLLRTVYFSRKSRRKRVKKNRSLACTVSGIENGCPGRSKKISG 203

Query: 123 HNGLIDTLSYHCVSNDEVRTTKQRLASSSSVEAATDSELSSEAMSVSSIIKRYFSSYDRE 182
            +      S  C S +E    K+ +  S  VE    SE SSE +SVS II+RYFS++D  
Sbjct: 204 PSA--KERSGFCTSGNEEEHRKEWI--SKVVECP--SERSSEVVSVSGIIERYFSNFDGM 263

Query: 183 TSISNQSRYDITR----SQPGEYLKMKNMGRGPS-------LLPLKVPFKPCP------- 242
               + S  ++      S   E L++   G           LL  K P +  P       
Sbjct: 264 NHFGSPSSSEVNSRVISSWSNEQLRVTTDGNHSDIQIGTTPLLTTKTPARETPFSLSTNS 323

Query: 243 ------QKDERSKLGKRLVMASYNLGISPIGGRPEISLCNAK-GKKFQEMMTLAKSSCFE 274
                  K E +++GKRLVMAS  LGIS    RP IS+   K GK      +L +S  FE
Sbjct: 324 RPGTSRDKLEITEVGKRLVMASNTLGISSSKQRPAISISRFKDGKLLGLDSSLVRSMVFE 379

[Close]

BLAST of CSPI07G08370.2 vs. TrEMBL
Match: A5ATX5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042361 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.2e-09
Identity = 90/306 (29.41%), Postives = 130/306 (42.48%), Query Frame = 1


Query: 3   FLHVKARPLNGFIEPCIPKNADCSP-NLNY----VTYPTERRGYLGTACKSKIRINGKKH 62
           FLH +A  L G     +  +      N  Y    VT P E + Y   A + K   N  K 
Sbjct: 118 FLHTEASSLGGSDLSSLSNHVTVETRNHTYDGSNVTDPMEPKSYTAIAVRDK---NKSKG 177

Query: 63  TRKRFQRQNCLSRLVGRGILAS-----NTKRKRKITNKKQVLEHMEKNSNTEGLIKDVEN 122
            R+R +R +CL  ++  G+L +      ++RKR   N+          +   G  K +  
Sbjct: 178 RRRRIKRYHCLKAVLW-GLLRTVYFSRKSRRKRVKKNRSLACTVSGIENGCPGRSKKISG 237

Query: 123 HNGLIDTLSYHCVSNDEVRTTKQRLASSSSVEAATDSELSSEAMSVSSIIKRYFSSYDRE 182
            +      S  C S +E    K+ +  S  VE    SE SSE +SVS II+RYFS++D  
Sbjct: 238 PSA--KERSGFCTSGNEEEHRKEWI--SKVVECP--SERSSEVVSVSGIIERYFSNFDGM 297

Query: 183 TSISNQSRYDITR----SQPGEYLKMKNMGRGPS-------LLPLKVPFKPCP------- 242
               + S  ++      S   E L++   G           LL  K P +  P       
Sbjct: 298 NHFGSPSSSEVNSRVISSWSNEQLRVTTDGNHSDIQIGTTPLLTTKTPARETPFSLSTNS 357

Query: 243 ------QKDERSKLGKRLVMASYNLGISPIGGRPEISLCNAK-GKKFQEMMTLAKSSCFE 274
                  K E +++GKRLVMAS  LGIS    RP IS+   K GK      +L +S  FE
Sbjct: 358 RPGTSRDKLEITEVGKRLVMASNTLGISSSKQRPAISISRFKDGKLLGLDSSLVRSMVFE 413

[Close]

BLAST of CSPI07G08370.2 vs. NCBI nr
Match: gi|778725386|ref|XP_004151358.2| (PREDICTED: uncharacterized protein LOC101220553 [Cucumis sativus])

HSP 1 Score: 524.2 bits (1349), Expect = 1.3e-145
Identity = 266/273 (97.44%), Postives = 269/273 (98.53%), Query Frame = 1


Query: 1   MQFLHVKARPLNGFIEPCIPKNADCSPNLNYVTYPTERRGYLGTACKSKIRINGKKHTRK 60
           MQFLHVKARPLNGFIEPCIPKNADCSPNLNYVTYPTERRGYLGTACKSKIRINGKKHTRK
Sbjct: 67  MQFLHVKARPLNGFIEPCIPKNADCSPNLNYVTYPTERRGYLGTACKSKIRINGKKHTRK 126

Query: 61  RFQRQNCLSRLVGRGILASNTKRKRKITNKKQVLEHMEKNSNTEGLIKDVENHNGLIDTL 120
           RFQRQNCLSRLVGRGILA NTKRKRKITNKKQVLEHMEKNS+TEGLIKDV+NHNGLI TL
Sbjct: 127 RFQRQNCLSRLVGRGILAWNTKRKRKITNKKQVLEHMEKNSDTEGLIKDVKNHNGLIGTL 186

Query: 121 SYHCVSNDEVRTTKQRLASSSSVEAATDSELSSEAMSVSSIIKRYFSSYDRETSISNQSR 180
           SYHCVS DEVRTTKQRLASSSSVEAATDSELSSEAMSVSSIIKRYFSSYDRE+SISNQSR
Sbjct: 187 SYHCVSIDEVRTTKQRLASSSSVEAATDSELSSEAMSVSSIIKRYFSSYDRESSISNQSR 246

Query: 181 YDITRSQPGEYLKMKNMGRGPSLLPLKVPFKPCPQKDERSKLGKRLVMASYNLGISPIGG 240
           YDITRSQPGEYLKMKNMGRGPS LPLKVPFKPCPQKDERSKLGKRLVMASYNLGISPIGG
Sbjct: 247 YDITRSQPGEYLKMKNMGRGPSSLPLKVPFKPCPQKDERSKLGKRLVMASYNLGISPIGG 306

Query: 241 RPEISLCNAKGKKFQEMMTLAKSSCFEISDSEN 274
           RPEISLCNAKGKKFQEMMTLAKSSCFEISDSEN
Sbjct: 307 RPEISLCNAKGKKFQEMMTLAKSSCFEISDSEN 339

[Close]

BLAST of CSPI07G08370.2 vs. NCBI nr
Match: gi|659126100|ref|XP_008463010.1| (PREDICTED: uncharacterized protein LOC103501255 [Cucumis melo])

HSP 1 Score: 473.4 bits (1217), Expect = 2.7e-130
Identity = 244/274 (89.05%), Postives = 257/274 (93.80%), Query Frame = 1


Query: 1   MQFLHVKARPLNGFIEPCIPKNADCSPNLNYVTYPTERRGYLGTACKSKIRINGKKHTRK 60
           MQFLHVKARPLN FIEPCIP+NA+CSPNLNY TYP ERRGY+GTACKSKIRINGKKH RK
Sbjct: 82  MQFLHVKARPLNEFIEPCIPENANCSPNLNYATYPMERRGYMGTACKSKIRINGKKHIRK 141

Query: 61  RFQRQNCLSRLVGRGILASNTKRKRKITNKKQVLEHMEKNSNTEGLIKDVENHNGLIDTL 120
           RFQRQNCLSRLVGRG+LA NT+RKRKITNKKQVLEHMEKNS+T+GLIKDV+N NG IDTL
Sbjct: 142 RFQRQNCLSRLVGRGVLAWNTRRKRKITNKKQVLEHMEKNSDTKGLIKDVDNPNGSIDTL 201

Query: 121 SYHCVSNDEVRTTKQRLASSSSVEAATDSELSSEAMSVSSIIKRYFSSYDRETSISNQSR 180
           SYHCV NDEVRTTK+RLASSS VEAATDSELSSEAMSVSSIIKRYFSS D E+SISNQSR
Sbjct: 202 SYHCVPNDEVRTTKRRLASSSLVEAATDSELSSEAMSVSSIIKRYFSSNDIESSISNQSR 261

Query: 181 YDITRSQPGEYLKM-KNMGRGPSLLPLKVPFKPCPQKDERSKLGKRLVMASYNLGISPIG 240
            DIT+ +P EYLKM KNMGRGPSLLPLKVPFKPCPQK ERSKLGKRLVMASYNLGISPI 
Sbjct: 262 CDITQIRPEEYLKMKKNMGRGPSLLPLKVPFKPCPQKAERSKLGKRLVMASYNLGISPIR 321

Query: 241 GRPEISLCNAKGKKFQEMMTLAKSSCFEISDSEN 274
           GRPEISLCNAKGKKFQEMMTLAKSSCFEISDSE+
Sbjct: 322 GRPEISLCNAKGKKFQEMMTLAKSSCFEISDSED 355

[Close]

BLAST of CSPI07G08370.2 vs. NCBI nr
Match: gi|731433296|ref|XP_010644590.1| (PREDICTED: uncharacterized protein LOC104877623 isoform X2 [Vitis vinifera])

HSP 1 Score: 69.7 bits (169), Expect = 9.0e-09
Identity = 90/306 (29.41%), Postives = 130/306 (42.48%), Query Frame = 1


Query: 3   FLHVKARPLNGFIEPCIPKNADCSP-NLNY----VTYPTERRGYLGTACKSKIRINGKKH 62
           FLH +A  L G     +  +      N  Y    VT P E + Y   A + K   N  K 
Sbjct: 84  FLHTEASSLGGSDLSSLSNHVTVETRNHTYDGSNVTDPMEPKSYTAIAVRDK---NKSKG 143

Query: 63  TRKRFQRQNCLSRLVGRGILAS-----NTKRKRKITNKKQVLEHMEKNSNTEGLIKDVEN 122
            R+R +R +CL  ++  G+L +      ++RKR   N+          +   G  K +  
Sbjct: 144 RRRRIKRYHCLKAVLW-GLLRTVYFSRKSRRKRVKKNRSLACTVSGIENGCPGRSKKISG 203

Query: 123 HNGLIDTLSYHCVSNDEVRTTKQRLASSSSVEAATDSELSSEAMSVSSIIKRYFSSYDRE 182
            +      S  C S +E    K+ +  S  VE    SE SSE +SVS II+RYFS++D  
Sbjct: 204 PSA--KERSGFCTSGNEEEHRKEWI--SKVVECP--SERSSEVVSVSGIIERYFSNFDGM 263

Query: 183 TSISNQSRYDITR----SQPGEYLKMKNMGRGPS-------LLPLKVPFKPCP------- 242
               + S  ++      S   E L++   G           LL  K P +  P       
Sbjct: 264 NHFGSPSSSEVNSRVISSWSNEQLRVTTDGNHSDIQIGTTPLLTTKTPARETPFSLSTNS 323

Query: 243 ------QKDERSKLGKRLVMASYNLGISPIGGRPEISLCNAK-GKKFQEMMTLAKSSCFE 274
                  K E +++GKRLVMAS  LGIS    RP IS+   K GK      +L +S  FE
Sbjct: 324 RPGTSRDKLEITEVGKRLVMASNTLGISSSKQRPAISISRFKDGKLLGLDSSLVRSMVFE 379

[Close]

BLAST of CSPI07G08370.2 vs. NCBI nr
Match: gi|731433294|ref|XP_010644589.1| (PREDICTED: uncharacterized protein LOC104877623 isoform X1 [Vitis vinifera])

HSP 1 Score: 69.7 bits (169), Expect = 9.0e-09
Identity = 90/306 (29.41%), Postives = 130/306 (42.48%), Query Frame = 1


Query: 3   FLHVKARPLNGFIEPCIPKNADCSP-NLNY----VTYPTERRGYLGTACKSKIRINGKKH 62
           FLH +A  L G     +  +      N  Y    VT P E + Y   A + K   N  K 
Sbjct: 100 FLHTEASSLGGSDLSSLSNHVTVETRNHTYDGSNVTDPMEPKSYTAIAVRDK---NKSKG 159

Query: 63  TRKRFQRQNCLSRLVGRGILAS-----NTKRKRKITNKKQVLEHMEKNSNTEGLIKDVEN 122
            R+R +R +CL  ++  G+L +      ++RKR   N+          +   G  K +  
Sbjct: 160 RRRRIKRYHCLKAVLW-GLLRTVYFSRKSRRKRVKKNRSLACTVSGIENGCPGRSKKISG 219

Query: 123 HNGLIDTLSYHCVSNDEVRTTKQRLASSSSVEAATDSELSSEAMSVSSIIKRYFSSYDRE 182
            +      S  C S +E    K+ +  S  VE    SE SSE +SVS II+RYFS++D  
Sbjct: 220 PSA--KERSGFCTSGNEEEHRKEWI--SKVVECP--SERSSEVVSVSGIIERYFSNFDGM 279

Query: 183 TSISNQSRYDITR----SQPGEYLKMKNMGRGPS-------LLPLKVPFKPCP------- 242
               + S  ++      S   E L++   G           LL  K P +  P       
Sbjct: 280 NHFGSPSSSEVNSRVISSWSNEQLRVTTDGNHSDIQIGTTPLLTTKTPARETPFSLSTNS 339

Query: 243 ------QKDERSKLGKRLVMASYNLGISPIGGRPEISLCNAK-GKKFQEMMTLAKSSCFE 274
                  K E +++GKRLVMAS  LGIS    RP IS+   K GK      +L +S  FE
Sbjct: 340 RPGTSRDKLEITEVGKRLVMASNTLGISSSKQRPAISISRFKDGKLLGLDSSLVRSMVFE 395

[Close]

BLAST of CSPI07G08370.2 vs. NCBI nr
Match: gi|147837900|emb|CAN67146.1| (hypothetical protein VITISV_042361 [Vitis vinifera])

HSP 1 Score: 69.7 bits (169), Expect = 9.0e-09
Identity = 90/306 (29.41%), Postives = 130/306 (42.48%), Query Frame = 1


Query: 3   FLHVKARPLNGFIEPCIPKNADCSP-NLNY----VTYPTERRGYLGTACKSKIRINGKKH 62
           FLH +A  L G     +  +      N  Y    VT P E + Y   A + K   N  K 
Sbjct: 118 FLHTEASSLGGSDLSSLSNHVTVETRNHTYDGSNVTDPMEPKSYTAIAVRDK---NKSKG 177

Query: 63  TRKRFQRQNCLSRLVGRGILAS-----NTKRKRKITNKKQVLEHMEKNSNTEGLIKDVEN 122
            R+R +R +CL  ++  G+L +      ++RKR   N+          +   G  K +  
Sbjct: 178 RRRRIKRYHCLKAVLW-GLLRTVYFSRKSRRKRVKKNRSLACTVSGIENGCPGRSKKISG 237

Query: 123 HNGLIDTLSYHCVSNDEVRTTKQRLASSSSVEAATDSELSSEAMSVSSIIKRYFSSYDRE 182
            +      S  C S +E    K+ +  S  VE    SE SSE +SVS II+RYFS++D  
Sbjct: 238 PSA--KERSGFCTSGNEEEHRKEWI--SKVVECP--SERSSEVVSVSGIIERYFSNFDGM 297

Query: 183 TSISNQSRYDITR----SQPGEYLKMKNMGRGPS-------LLPLKVPFKPCP------- 242
               + S  ++      S   E L++   G           LL  K P +  P       
Sbjct: 298 NHFGSPSSSEVNSRVISSWSNEQLRVTTDGNHSDIQIGTTPLLTTKTPARETPFSLSTNS 357

Query: 243 ------QKDERSKLGKRLVMASYNLGISPIGGRPEISLCNAK-GKKFQEMMTLAKSSCFE 274
                  K E +++GKRLVMAS  LGIS    RP IS+   K GK      +L +S  FE
Sbjct: 358 RPGTSRDKLEITEVGKRLVMASNTLGISSSKQRPAISISRFKDGKLLGLDSSLVRSMVFE 413

The following BLAST results are available for this feature:

BLAST of CSPI07G08370.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI07G08370.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K319_CUCSA	9.3e-146	97.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G122360 PE=4 SV=1	[more]
D7UAI5_VITVI	6.2e-09	29.41	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g00660 PE=4 SV=...	[more]
A5ATX5_VITVI	6.2e-09	29.41	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042361 PE=4 SV=1	[more]

BLAST of CSPI07G08370.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI07G08370.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778725386\|ref\|XP_004151358.2\|	1.3e-145	97.44	PREDICTED: uncharacterized protein LOC101220553 [Cucumis sativus]	[more]
gi\|659126100\|ref\|XP_008463010.1\|	2.7e-130	89.05	PREDICTED: uncharacterized protein LOC103501255 [Cucumis melo]	[more]
gi\|731433296\|ref\|XP_010644590.1\|	9.0e-09	29.41	PREDICTED: uncharacterized protein LOC104877623 isoform X2 [Vitis vinifera]	[more]
gi\|731433294\|ref\|XP_010644589.1\|	9.0e-09	29.41	PREDICTED: uncharacterized protein LOC104877623 isoform X1 [Vitis vinifera]	[more]
gi\|147837900\|emb\|CAN67146.1\|	9.0e-09	29.41	hypothetical protein VITISV_042361 [Vitis vinifera]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI07G08370	CSPI07G08370	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI07G08370.2	CSPI07G08370.2-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G08370.2.utr5p1	CSPI07G08370.2.utr5p1	five_prime_UTR
CSPI07G08370.2.utr5p2	CSPI07G08370.2.utr5p2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G08370.2.cds2	CSPI07G08370.2.cds2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G08370.2.utr3p1	CSPI07G08370.2.utr3p1	three_prime_UTR