CSPI07G07640.1 (mRNA) Wild cucumber (PI 183967)

Overview
NameCSPI07G07640.1
TypemRNA
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 5452486 .. 5452662 (+)
Sequence length177
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAGCGTAAAGAGATGGAATGGGGACCCAAGATATGTTTTAATCCGACGGTGACTCTTTGCTGGGTTTGTGGTGTGCTGTCCCACAGACTAACCAGCCCCTTCTTCAACCACCCATACAACGACACGTGGTCTTCTCCAGCTACGAACGATGGTGACACGAGGAATAGCTGA

mRNA sequence

ATGAAAGAGCGTAAAGAGATGGAATGGGGACCCAAGATATGTTTTAATCCGACGGTGACTCTTTGCTGGGTTTGTGGTGTGCTGTCCCACAGACTAACCAGCCCCTTCTTCAACCACCCATACAACGACACGTGGTCTTCTCCAGCTACGAACGATGGTGACACGAGGAATAGCTGA

Coding sequence (CDS)

ATGAAAGAGCGTAAAGAGATGGAATGGGGACCCAAGATATGTTTTAATCCGACGGTGACTCTTTGCTGGGTTTGTGGTGTGCTGTCCCACAGACTAACCAGCCCCTTCTTCAACCACCCATACAACGACACGTGGTCTTCTCCAGCTACGAACGATGGTGACACGAGGAATAGCTGA
Homology
[Close]
BLAST of CSPI07G07640.1 vs. TrEMBL
Match: A0A0A0K7Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073670 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.9e-28
Identity = 56/58 (96.55%), Postives = 57/58 (98.28%), Query Frame = 1 

Query: 1  MKERKEMEWGPKICFNPTVTLCWVCGVLSHRLTSPFFNHPYNDTWSSPATNDGDTRNS 59
          MKERKEMEWGPK CFNPTVTLCWVCGVLSHRLTSPFFNHPYNDTWSSPAT+DGDTRNS
Sbjct: 1  MKERKEMEWGPKRCFNPTVTLCWVCGVLSHRLTSPFFNHPYNDTWSSPATSDGDTRNS 58

[Close]
BLAST of CSPI07G07640.1 vs. NCBI nr
Match: gi|700188698|gb|KGN43931.1| (hypothetical protein Csa_7G073670 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 4.1e-28
Identity = 56/58 (96.55%), Postives = 57/58 (98.28%), Query Frame = 1 

Query: 1  MKERKEMEWGPKICFNPTVTLCWVCGVLSHRLTSPFFNHPYNDTWSSPATNDGDTRNS 59
          MKERKEMEWGPK CFNPTVTLCWVCGVLSHRLTSPFFNHPYNDTWSSPAT+DGDTRNS
Sbjct: 1  MKERKEMEWGPKRCFNPTVTLCWVCGVLSHRLTSPFFNHPYNDTWSSPATSDGDTRNS 58

The following BLAST results are available for this feature:
BLAST of CSPI07G07640.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G07640.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7Z9_CUCSA2.9e-2896.55Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073670 PE=4 SV=1[more]
BLAST of CSPI07G07640.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G07640.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188698|gb|KGN43931.1|4.1e-2896.55hypothetical protein Csa_7G073670 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI07G07640CSPI07G07640gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI07G07640.1CSPI07G07640.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI07G07640.1.cds1CSPI07G07640.1.cds1CDS