CSPI07G07280.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G07280.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Plant basic secretory family protein
Location	Chr7 : 5255594 .. 5255839 (+)
Sequence length	246

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACATATCTGGCAATGGAACGGAAAGGGGGCGGCGCCGGGGTGGTTGATCGAAGGTTTTGCAGATTACACACGACTGCAATCAGGGTACATTCCGAGCCACTGGGTGCCGCCTGGAGGTGGGTCAAATTATACAGATAGTTACGACAAGACAGCAAGATTTATGGACTATTTGGAGAAGAGGACGAGTGGGTTCGTGTCAAAGCTGAATCAAAAGCTCAGAGACGGCTTCTCTCTAGATTAA

mRNA sequence

ATGACACATATCTGGCAATGGAACGGAAAGGGGGCGGCGCCGGGGTGGTTGATCGAAGGTTTTGCAGATTACACACGACTGCAATCAGGGTACATTCCGAGCCACTGGGTGCCGCCTGGAGGTGGGTCAAATTATACAGATAGTTACGACAAGACAGCAAGATTTATGGACTATTTGGAGAAGAGGACGAGTGGGTTCGTGTCAAAGCTGAATCAAAAGCTCAGAGACGGCTTCTCTCTAGATTAA

Coding sequence (CDS)

ATGACACATATCTGGCAATGGAACGGAAAGGGGGCGGCGCCGGGGTGGTTGATCGAAGGTTTTGCAGATTACACACGACTGCAATCAGGGTACATTCCGAGCCACTGGGTGCCGCCTGGAGGTGGGTCAAATTATACAGATAGTTACGACAAGACAGCAAGATTTATGGACTATTTGGAGAAGAGGACGAGTGGGTTCGTGTCAAAGCTGAATCAAAAGCTCAGAGACGGCTTCTCTCTAGATTAA

Homology

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BLAST of CSPI07G07280.1 vs. TrEMBL
Match: A0A0A0K6G6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G072790 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 9.8e-43
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 1


Query: 1  MTHIWQWNGKGAAPGWLIEGFADYTRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
          MTHIWQWNGKGAAPGWLIEGFADY RLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE
Sbjct: 1  MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60

Query: 61 KRTSGFVSKLNQKLRDGFSLD 82
          KRTSGFVSKLNQKLRDGFSLD
Sbjct: 61 KRTSGFVSKLNQKLRDGFSLD 81

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BLAST of CSPI07G07280.1 vs. TrEMBL
Match: A0A0A0K7U8_CUCSA (NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072780 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.5e-30
Identity = 58/79 (73.42%), Postives = 67/79 (84.81%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYTRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           M H+WQWNG GAAPGWLIEG+ADY RL++GYIP HWV PGGGS++ + YDKTARFMDYLE
Sbjct: 155 MVHVWQWNGNGAAPGWLIEGYADYVRLKAGYIPGHWVAPGGGSSWMEGYDKTARFMDYLE 214

Query: 61  KRTSGFVSKLNQKLRDGFS 80
            R SGFVS LN+ LR G+S
Sbjct: 215 GRRSGFVSALNRMLRVGYS 233

[Close]

BLAST of CSPI07G07280.1 vs. TrEMBL
Match: A0A0A0K4M0_CUCSA (NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072810 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 6.4e-26
Identity = 54/79 (68.35%), Postives = 64/79 (81.01%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYTRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           MTHIWQWNG   APG LIEG ADY RL+SGYIP HWV PGGGS++   YD TARF+DYLE
Sbjct: 124 MTHIWQWNGIPNAPGGLIEGIADYVRLKSGYIPGHWVGPGGGSSWDQGYDVTARFLDYLE 183

Query: 61  KRTSGFVSKLNQKLRDGFS 80
              SGFV++LN++LR+G+S
Sbjct: 184 GLRSGFVAELNRRLRNGYS 202

[Close]

BLAST of CSPI07G07280.1 vs. TrEMBL
Match: I6ZPI0_OLEEU (PRp27-like protein OS=Olea europaea subsp. europaea PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.1e-25
Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYTRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           MTHIWQWNG G APG LIEG ADY RL++GY PSHWV PG G  +   YD TARF+DY +
Sbjct: 126 MTHIWQWNGNGQAPGGLIEGIADYVRLKAGYAPSHWVKPGEGDRWDQGYDVTARFLDYCD 185

Query: 61  KRTSGFVSKLNQKLRDGFS 80
              SGFV++LN+K+RDG++
Sbjct: 186 SLRSGFVAELNKKMRDGYN 204

[Close]

BLAST of CSPI07G07280.1 vs. TrEMBL
Match: M5VHZ4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021584mg PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 7.1e-25
Identity = 49/78 (62.82%), Postives = 62/78 (79.49%), Query Frame = 1


Query: 2   THIWQWNGKGAAPGWLIEGFADYTRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLEK 61
           TH+WQWNG G APG LI+G ADY RL++G++PSHWV PG G+ +   YD TARF+DYL  
Sbjct: 123 THVWQWNGNGQAPGGLIDGIADYVRLKAGFVPSHWVQPGQGNRWDQGYDVTARFLDYLNG 182

Query: 62  RTSGFVSKLNQKLRDGFS 80
           R SGFV++LN+KLR G+S
Sbjct: 183 RRSGFVAELNKKLRSGYS 200

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BLAST of CSPI07G07280.1 vs. TAIR10
Match: AT2G15220.1 (AT2G15220.1 Plant basic secretory protein (BSP) family protein)

HSP 1 Score: 111.7 bits (278), Expect = 2.2e-25
Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYTRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           + H WQWNG G APG LIEG ADY RL++GY PSHWV PG G  +   YD TARF+DY  
Sbjct: 122 VVHSWQWNGAGRAPGGLIEGIADYVRLKAGYAPSHWVGPGRGDRWDQGYDVTARFLDYCN 181

Query: 61  KRTSGFVSKLNQKLRDGFS 80
              +GFV++LN+K+R+G+S
Sbjct: 182 GLRNGFVAELNKKMRNGYS 200

[Close]

BLAST of CSPI07G07280.1 vs. TAIR10
Match: AT2G15130.1 (AT2G15130.1 Plant basic secretory protein (BSP) family protein)

HSP 1 Score: 109.8 bits (273), Expect = 8.2e-25
Identity = 47/85 (55.29%), Postives = 60/85 (70.59%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYTRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           + H WQWNG G APG LIEG ADY RL++GY+ SHWV PGGG  +   YD TARF++Y  
Sbjct: 122 VVHSWQWNGAGRAPGGLIEGIADYVRLKAGYVASHWVRPGGGDRWDQGYDVTARFLEYCN 181

Query: 61  KRTSGFVSKLNQKLR----DGFSLD 82
              +GFV++LN+K+R    DGF +D
Sbjct: 182 DLRNGFVAELNKKMRSDYNDGFFVD 206

[Close]

BLAST of CSPI07G07280.1 vs. NCBI nr
Match: gi|778730197|ref|XP_004137102.2| (PREDICTED: uncharacterized protein LOC101216547 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 1.4e-42
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 1


Query: 1  MTHIWQWNGKGAAPGWLIEGFADYTRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
          MTHIWQWNGKGAAPGWLIEGFADY RLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE
Sbjct: 1  MTHIWQWNGKGAAPGWLIEGFADYIRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60

Query: 61 KRTSGFVSKLNQKLRDGFSLD 82
          KRTSGFVSKLNQKLRDGFSLD
Sbjct: 61 KRTSGFVSKLNQKLRDGFSLD 81

[Close]

BLAST of CSPI07G07280.1 vs. NCBI nr
Match: gi|449438651|ref|XP_004137101.1| (PREDICTED: uncharacterized protein LOC101216297 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 3.6e-30
Identity = 58/79 (73.42%), Postives = 67/79 (84.81%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYTRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           M H+WQWNG GAAPGWLIEG+ADY RL++GYIP HWV PGGGS++ + YDKTARFMDYLE
Sbjct: 124 MVHVWQWNGNGAAPGWLIEGYADYVRLKAGYIPGHWVAPGGGSSWMEGYDKTARFMDYLE 183

Query: 61  KRTSGFVSKLNQKLRDGFS 80
            R SGFVS LN+ LR G+S
Sbjct: 184 GRRSGFVSALNRMLRVGYS 202

[Close]

BLAST of CSPI07G07280.1 vs. NCBI nr
Match: gi|700188658|gb|KGN43891.1| (NtPRp27-like protein [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 3.6e-30
Identity = 58/79 (73.42%), Postives = 67/79 (84.81%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYTRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           M H+WQWNG GAAPGWLIEG+ADY RL++GYIP HWV PGGGS++ + YDKTARFMDYLE
Sbjct: 155 MVHVWQWNGNGAAPGWLIEGYADYVRLKAGYIPGHWVAPGGGSSWMEGYDKTARFMDYLE 214

Query: 61  KRTSGFVSKLNQKLRDGFS 80
            R SGFVS LN+ LR G+S
Sbjct: 215 GRRSGFVSALNRMLRVGYS 233

[Close]

BLAST of CSPI07G07280.1 vs. NCBI nr
Match: gi|449438369|ref|XP_004136961.1| (PREDICTED: uncharacterized protein LOC101221124 [Cucumis sativus])

HSP 1 Score: 124.4 bits (311), Expect = 9.2e-26
Identity = 54/79 (68.35%), Postives = 64/79 (81.01%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYTRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           MTHIWQWNG   APG LIEG ADY RL+SGYIP HWV PGGGS++   YD TARF+DYLE
Sbjct: 124 MTHIWQWNGIPNAPGGLIEGIADYVRLKSGYIPGHWVGPGGGSSWDQGYDVTARFLDYLE 183

Query: 61  KRTSGFVSKLNQKLRDGFS 80
              SGFV++LN++LR+G+S
Sbjct: 184 GLRSGFVAELNRRLRNGYS 202

[Close]

BLAST of CSPI07G07280.1 vs. NCBI nr
Match: gi|659109990|ref|XP_008454989.1| (PREDICTED: uncharacterized protein LOC103495269 [Cucumis melo])

HSP 1 Score: 122.5 bits (306), Expect = 3.5e-25
Identity = 53/79 (67.09%), Postives = 65/79 (82.28%), Query Frame = 1


Query: 1   MTHIWQWNGKGAAPGWLIEGFADYTRLQSGYIPSHWVPPGGGSNYTDSYDKTARFMDYLE 60
           MTHIWQWNG   APG LIEG ADY RL+SGYIP+HWV PGGGS++   YD TARF+DYLE
Sbjct: 124 MTHIWQWNGIPNAPGGLIEGIADYIRLKSGYIPNHWVGPGGGSSWDQGYDVTARFLDYLE 183

Query: 61  KRTSGFVSKLNQKLRDGFS 80
             +SGFV++LN++L+ G+S
Sbjct: 184 GLSSGFVAELNRRLKYGYS 202

The following BLAST results are available for this feature:

BLAST of CSPI07G07280.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI07G07280.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6G6_CUCSA	9.8e-43	98.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G072790 PE=4 SV=1	[more]
A0A0A0K7U8_CUCSA	2.5e-30	73.42	NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072780 PE=4 SV=1	[more]
A0A0A0K4M0_CUCSA	6.4e-26	68.35	NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072810 PE=4 SV=1	[more]
I6ZPI0_OLEEU	4.1e-25	63.29	PRp27-like protein OS=Olea europaea subsp. europaea PE=2 SV=1	[more]
M5VHZ4_PRUPE	7.1e-25	62.82	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021584mg PE=4 SV=1	[more]

BLAST of CSPI07G07280.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G15220.1	2.2e-25	58.23	Plant basic secretory protein (BSP) family protein	[more]
AT2G15130.1	8.2e-25	55.29	Plant basic secretory protein (BSP) family protein	[more]

BLAST of CSPI07G07280.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778730197\|ref\|XP_004137102.2\|	1.4e-42	98.77	PREDICTED: uncharacterized protein LOC101216547 [Cucumis sativus]	[more]
gi\|449438651\|ref\|XP_004137101.1\|	3.6e-30	73.42	PREDICTED: uncharacterized protein LOC101216297 [Cucumis sativus]	[more]
gi\|700188658\|gb\|KGN43891.1\|	3.6e-30	73.42	NtPRp27-like protein [Cucumis sativus]	[more]
gi\|449438369\|ref\|XP_004136961.1\|	9.2e-26	68.35	PREDICTED: uncharacterized protein LOC101221124 [Cucumis sativus]	[more]
gi\|659109990\|ref\|XP_008454989.1\|	3.5e-25	67.09	PREDICTED: uncharacterized protein LOC103495269 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007541	Uncharacterised_BSP

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI07G07280	CSPI07G07280	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI07G07280.1	CSPI07G07280.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G07280.1.cds1	CSPI07G07280.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007541	Uncharacterised protein family, basic secretory protein	PFAM	PF04450	BSP	coord: 1..78 score: 4.8
None	No IPR available	PANTHER	PTHR33321	FAMILY NOT NAMED	coord: 1..79 score: 2.8