CSPI07G04890.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G04890.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ethylene-responsive transcription factor
Location	Chr7 : 3625389 .. 3626787 (+)
Sequence length	630

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAAAGAGAAGAAAAAAACATGATCCATCCGTAGGGCCCACCTCCATCCTGATGGCGCTACTATAAAACATAACTCCAGCACACCTAATTCTATCCCCAAATCAGTGTAATCAAAACAACCTACACATCTCCTTCAACCACTCCTTTTTCGTTTAACAACCGCCATGGTTGCCAACCAAAAATCCCTTCCTTCTCTTTCCAACAACAATGCTAAGGATCTCCATTTCCGTGGCGTTCGTAAGAGGCCTTGGGGTCGATACGCTGCCGAGATCCGTGATCCCACCAAGAAAAGCCGCGTTTGGCTCGGTACCTTCGACACCGCCGAGGAGGCTGCACGTGCTTACGACACTGCCGCCCGTCAGTTTCGTGGCGCCAAGGCTAAAACCAACTTTCCCCTTCCTGACGACTTCATCGACGTTTCTCCTCACAACACCAACCAAAGTCCTAGTCCTACCAGCACCCTCGACTCCTCTTCCTCCTCCACCCATGAGAAAACCCCCTCTCCGGAGATCGCCCGAAGCTACGGCGTTGGAAGAACTTTTCCATTCATTCAACCTCAGTTTTTACATGGGGGCGGCACCGTTCGTCCACTTTTGTTCACGGACGTTTATGGTAGAGCAGAATTCGTAGCTCATGGTTATCCTATACGGTTCGATCCGGCTACGGTGGATTTGACGTCGAGGTTCACCGGCGGGATCCAGACCGATACGAACTCATCGTCGTTGGTTGACTTCCGACCGGCGAAGGAAATTCTGAATCTCGATCTTAATCTGGCTCCGCCGGTTGATGCTTAATTTCTCCGCTAATTTAGTCTTTTTCAATTAATTTTTTTGGGATTTAATTTTGTTAGAGATTTAGAAAGGGGAAAAAAAATTAACATGCTGGAAATAGGGTACTCTTTATTTCTCTCTCTCTTTTTTCTTTTTTTTGTCTTTTTTTGTGGCAGCTTGAGAGATGTTGTAATTCAATGTTGAATCTCGTAAGTGCTATTGTAAAAATGCTGTAAGAAAAGAAGTGTAACCTTCAATTTTAAAGTTGGAACTAATAGAAAAAATGTTCCTTATCAACCAATTAACTCCGAATTTAGTCCTTCATATTTCTACATTTACTAGATCGTCACTACTTAATTATTAAATCTAAGTGGAAGTAATTTTCCCCGATTGGGCAGTATTATTATTGTTCTAAAAAATTCCTCCGTAAAATCTAGCGGTGGAGAGAATTAAAGTAAAGAAAAGAAAAGAAAAGAAAAGAGAAGAAAGTACTGGATTTTTTATTTAAACGGTGACCGACACGTGTAGGTTAGCGAGCATAATGAGAGCCGCCCGACGCGACGCCGACGTGAGAAAATGAATTGATTAATTATTATTATTATTTTGTTAAAGAAAGAGGGGGTGGG

mRNA sequence

ATGGTTGCCAACCAAAAATCCCTTCCTTCTCTTTCCAACAACAATGCTAAGGATCTCCATTTCCGTGGCGTTCGTAAGAGGCCTTGGGGTCGATACGCTGCCGAGATCCGTGATCCCACCAAGAAAAGCCGCGTTTGGCTCGGTACCTTCGACACCGCCGAGGAGGCTGCACGTGCTTACGACACTGCCGCCCGTCAGTTTCGTGGCGCCAAGGCTAAAACCAACTTTCCCCTTCCTGACGACTTCATCGACGTTTCTCCTCACAACACCAACCAAAGTCCTAGTCCTACCAGCACCCTCGACTCCTCTTCCTCCTCCACCCATGAGAAAACCCCCTCTCCGGAGATCGCCCGAAGCTACGGCGTTGGAAGAACTTTTCCATTCATTCAACCTCAGTTTTTACATGGGGGCGGCACCGTTCGTCCACTTTTGTTCACGGACGTTTATGGTAGAGCAGAATTCGTAGCTCATGGTTATCCTATACGGTTCGATCCGGCTACGGTGGATTTGACGTCGAGGTTCACCGGCGGGATCCAGACCGATACGAACTCATCGTCGTTGGTTGACTTCCGACCGGCGAAGGAAATTCTGAATCTCGATCTTAATCTGGCTCCGCCGGTTGATGCTTAA

Coding sequence (CDS)

ATGGTTGCCAACCAAAAATCCCTTCCTTCTCTTTCCAACAACAATGCTAAGGATCTCCATTTCCGTGGCGTTCGTAAGAGGCCTTGGGGTCGATACGCTGCCGAGATCCGTGATCCCACCAAGAAAAGCCGCGTTTGGCTCGGTACCTTCGACACCGCCGAGGAGGCTGCACGTGCTTACGACACTGCCGCCCGTCAGTTTCGTGGCGCCAAGGCTAAAACCAACTTTCCCCTTCCTGACGACTTCATCGACGTTTCTCCTCACAACACCAACCAAAGTCCTAGTCCTACCAGCACCCTCGACTCCTCTTCCTCCTCCACCCATGAGAAAACCCCCTCTCCGGAGATCGCCCGAAGCTACGGCGTTGGAAGAACTTTTCCATTCATTCAACCTCAGTTTTTACATGGGGGCGGCACCGTTCGTCCACTTTTGTTCACGGACGTTTATGGTAGAGCAGAATTCGTAGCTCATGGTTATCCTATACGGTTCGATCCGGCTACGGTGGATTTGACGTCGAGGTTCACCGGCGGGATCCAGACCGATACGAACTCATCGTCGTTGGTTGACTTCCGACCGGCGAAGGAAATTCTGAATCTCGATCTTAATCTGGCTCCGCCGGTTGATGCTTAA

Homology

[Close]

BLAST of CSPI07G04890.1 vs. Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.3e-39
Identity = 103/214 (48.13%), Postives = 129/214 (60.28%), Query Frame = 1


Query: 12  SNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTAARQFRGAK 71
           ++NNAK++ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAARAYDTAAR FRGAK
Sbjct: 16  THNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAK 75

Query: 72  AKTNFPLPDDFIDVS----PHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSYGVGRTFP 131
           AKTNFP    F+++S    P    +SPS +STLD +S       P   +  S   G   P
Sbjct: 76  AKTNFP---TFLELSDQKVPTGFARSPSQSSTLDCAS-------PPTLVVPSATAGNVPP 135

Query: 132 FIQPQFLHGGG-------TVRPLLFTDVYGRAEFVAHGYP----IRFDPATVDLTSRFTG 191
            ++     GGG         RP+ F D+ G    V  G P      F    V + ++   
Sbjct: 136 QLELSLGGGGGGSCYQIPMSRPVYFLDLMGIGN-VGRGQPPPVTSAFRSPVVHVATKMAC 195

Query: 192 GIQTDTNSSSLVDFRPAKE----ILNLDLNLAPP 207
           G Q+D++SSS+VDF    E    +L+LDLNL PP
Sbjct: 196 GAQSDSDSSSVVDFEGGMEKRSQLLDLDLNLPPP 218

[Close]

BLAST of CSPI07G04890.1 vs. Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-33
Identity = 92/194 (47.42%), Postives = 116/194 (59.79%), Query Frame = 1


Query: 17  KDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTAARQFRGAKAKTNF 76
           K++HFRGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAARAYDTAAR+FRG+KAKTNF
Sbjct: 29  KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 77  PLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSYGVGRTFPFIQPQFLHG 136
           PLP +   V+    N S    +T+ ++   T ++ P             F   + + + G
Sbjct: 89  PLPGESTTVNDGGENDSYVNRTTVTTAREMTRQRFP-------------FACHRERKVVG 148

Query: 137 GGTVRPLLFTDVYG---RAEFVAHGYPIRFDPATVDLTSRFTGGIQTDTNSSSLVDFRPA 196
           G       F        RAE ++   P+RFDP  ++L+     GI+        V   P 
Sbjct: 149 GYASAGFFFDPSRAASLRAE-LSRVCPVRFDPVNIELSI----GIR------ETVKVEPR 197

Query: 197 KEILNLDLNLAPPV 208
           +E LNLDLNLAPPV
Sbjct: 209 RE-LNLDLNLAPPV 197

[Close]

BLAST of CSPI07G04890.1 vs. Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.0e-30
Identity = 68/103 (66.02%), Postives = 79/103 (76.70%), Query Frame = 1


Query: 10  SLSNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTAARQFRG 69
           ++  N  K++H+RGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAA+AYDTAAR+FRG
Sbjct: 16  NVKTNGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRG 75

Query: 70  AKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTP 113
            KAKTNFPLP +         NQS S +ST++SSS  T    P
Sbjct: 76  PKAKTNFPLPSE---------NQSTSHSSTMESSSGETGIHAP 109

[Close]

BLAST of CSPI07G04890.1 vs. Swiss-Prot
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.0e-29
Identity = 85/204 (41.67%), Postives = 110/204 (53.92%), Query Frame = 1


Query: 13  NNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTAARQFRGAKA 72
           +N AK++ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTA++AARAYD AAR FRG KA
Sbjct: 23  SNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKA 82

Query: 73  KTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSYGVG----RTFPF 132
           KTNF +              SP+ +ST+  S ++    TP P +  S G G    R  P 
Sbjct: 83  KTNFGV----------IVGSSPTQSSTVVDSPTAARFITP-PHLELSLGGGGACRRKIPL 142

Query: 133 IQPQFLHGGGTVRPLLFTDVYGRAEFVAHGYPIRFDPATVDLTSRFTGGIQTDTNSSSLV 192
           + P + +   T                   YP              T G+Q+++ +SS+V
Sbjct: 143 VHPVYYYNMAT-------------------YP-----------KMTTCGVQSESETSSVV 185

Query: 193 DFR----PAKEILNLDLNLAPPVD 209
           DF          L+LDLNLAPP +
Sbjct: 203 DFEGGAGKISPPLDLDLNLAPPAE 185

[Close]

BLAST of CSPI07G04890.1 vs. Swiss-Prot
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.8e-29
Identity = 66/103 (64.08%), Postives = 78/103 (75.73%), Query Frame = 1


Query: 10  SLSNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTAARQFRG 69
           ++  +  K++H+RGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAA+AYDTAAR+FRG
Sbjct: 16  NVKTDGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRG 75

Query: 70  AKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTP 113
            KAKTNFP P +         NQSPS +ST++SSS       P
Sbjct: 76  PKAKTNFPSPTE---------NQSPSHSSTVESSSGENGVHAP 109

[Close]

BLAST of CSPI07G04890.1 vs. TrEMBL
Match: A0A0A0K742_CUCSA (Ethylene-responsive element-binding protein OS=Cucumis sativus GN=Csa_7G049230 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 2.9e-115
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1


Query: 1   MVANQKSLPSLSNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAY 60
           MVANQKSLPSLSNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAY
Sbjct: 1   MVANQKSLPSLSNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAY 60

Query: 61  DTAARQFRGAKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSY 120
           DTAARQFRGAKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSY
Sbjct: 61  DTAARQFRGAKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSY 120

Query: 121 GVGRTFPFIQPQFLHGGGTVRPLLFTDVYGRAEFVAHGYPIRFDPATVDLTSRFTGGIQT 180
           GVGRTFPFIQPQFLHGGGTVRPLLFTDVYGRAEFVAHGYPIRFDPATVDLTSRFTGGIQT
Sbjct: 121 GVGRTFPFIQPQFLHGGGTVRPLLFTDVYGRAEFVAHGYPIRFDPATVDLTSRFTGGIQT 180

Query: 181 DTNSSSLVDFRPAKEILNLDLNLAPPVDA 210
           DTNSSSLVDFRPAKEILNLDLNLAPPVDA
Sbjct: 181 DTNSSSLVDFRPAKEILNLDLNLAPPVDA 209

[Close]

BLAST of CSPI07G04890.1 vs. TrEMBL
Match: V5QP37_MOMCH (Ethylene-responsive transcription factor OS=Momordica charantia PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 7.5e-79
Identity = 158/229 (69.00%), Postives = 181/229 (79.04%), Query Frame = 1


Query: 1   MVANQKSLP---SLSNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAA 60
           MVA +KS     + ++NN ++LHFRGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAA
Sbjct: 1   MVAREKSTAKKLTATSNNGRELHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAA 60

Query: 61  RAYDTAARQFRGAKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIA 120
           RAYDTAARQFRGAKAKTNFPLP++ I+VSPH  N SPS +ST++SSSSS+ EK+PS EI 
Sbjct: 61  RAYDTAARQFRGAKAKTNFPLPEELIEVSPHKINHSPSASSTVESSSSSSQEKSPSSEIF 120

Query: 121 RSYG----VGRTFPFIQPQF------------LHGGGTVRPLLFTDVYGRAEFVAHGYPI 180
           R YG     GRTFPFIQPQF                   RP+LF D +GR EFVAHGYP+
Sbjct: 121 RGYGGALNAGRTFPFIQPQFQPQVMVGCNASASAAAANARPVLFMDAFGRPEFVAHGYPL 180

Query: 181 RFDPATVDLTSRFTGGI-QTDTNSSSLVDFRPAKEILNLDLNLAPPVDA 210
           RFDPATVDLT+RF GGI Q+D++SSS+VD RPAKEILNLDLNLAPPVDA
Sbjct: 181 RFDPATVDLTARFAGGIHQSDSDSSSVVDCRPAKEILNLDLNLAPPVDA 229

[Close]

BLAST of CSPI07G04890.1 vs. TrEMBL
Match: I3SGY0_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.6e-50
Identity = 124/218 (56.88%), Postives = 147/218 (67.43%), Query Frame = 1


Query: 13  NNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTAARQFRGAKA 72
           +NNA ++HFRGVRKRPWGRY+AEIRDP KKSRVWLGTFDTAEEAARAYD AARQFRG KA
Sbjct: 33  SNNATEVHFRGVRKRPWGRYSAEIRDPGKKSRVWLGTFDTAEEAARAYDAAARQFRGPKA 92

Query: 73  KTNFPL---------PDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSYG-V 132
           KTNFP          P+D + V+    NQSPS +ST++SS       TP  +I R  G V
Sbjct: 93  KTNFPQSPSPDNNTGPNDVV-VANVKANQSPSQSSTVESS-------TPERDITRGGGVV 152

Query: 133 GRTFPF--IQPQFL---HGGG------TVRPLLFTDVYGRAEFVAHGYPIRFDPATVDLT 192
              FPF  + PQ L    GGG       VRP++F D   +AEF A  +P+RF+   VD T
Sbjct: 153 VDRFPFLPLHPQQLMPFSGGGDVVYTAPVRPVIFLDPASQAEFFAQRFPVRFESGPVDFT 212

Query: 193 SRFTGGIQTDTNSSSLVDFRPAKEILNLDLNLAPPVDA 210
             F GGIQ+D++SSS+VD RP K  LNLDLNLAPP +A
Sbjct: 213 GMFGGGIQSDSDSSSVVDCRP-KPTLNLDLNLAPPNEA 241

[Close]

BLAST of CSPI07G04890.1 vs. TrEMBL
Match: Q2I2S8_MEDTR (Ethylene response factor OS=Medicago truncatula GN=ERF-6 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.6e-47
Identity = 114/209 (54.55%), Postives = 137/209 (65.55%), Query Frame = 1


Query: 9   PSLSNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTAARQFR 68
           PS +NNNA ++HFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAARAYD AARQFR
Sbjct: 16  PSNNNNNATEIHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDNAARQFR 75

Query: 69  GAKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSYGVGRTFPF 128
           G KAKTNFP P   +         SPS +ST++SS  +   +    E+     V   FPF
Sbjct: 76  GPKAKTNFPPPPSDV------KEDSPSQSSTVESSVPAPDREVTRREVPTGGSVMDRFPF 135

Query: 129 --IQPQFL----HGGGTVR---PLLFTDVYGRAEFVAHGYPIRFDPATVDLTSRFTGGIQ 188
             IQ Q +     G G V    P+ F D  GRAEF+   +  RF+P  V     F GG+Q
Sbjct: 136 LSIQQQIMPFAGAGAGAVDGMVPVFFYDPAGRAEFLNQRFTNRFEPEPVQFNIGFGGGVQ 195

Query: 189 TDTNSSSLVDFRPAKEILNLDLNLAPPVD 209
           +D++SSS+VD +P K  LNLDLNLAPP++
Sbjct: 196 SDSDSSSVVDCQP-KRALNLDLNLAPPME 217

[Close]

BLAST of CSPI07G04890.1 vs. TrEMBL
Match: V4U3I7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016276mg PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.7e-46
Identity = 113/221 (51.13%), Postives = 148/221 (66.97%), Query Frame = 1


Query: 4   NQKSLPSLSNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTA 63
           N+K++ + SNN  K++H+RGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAARAYD A
Sbjct: 46  NRKNIDNRSNNK-KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAA 105

Query: 64  ARQFRGAKAKTNFPLPDDFIDVSPHNTN-QSPSPTSTLDSSSS-STHEKTPSPEIARSYG 123
           AR+FRG+KAKTNFPLP + + ++ ++ N QSPS +ST++SSSS    E     E+ R  G
Sbjct: 106 AREFRGSKAKTNFPLPSEIVAINKNSNNQQSPSQSSTVESSSSPPPMEPNVEREVTRHVG 165

Query: 124 --------VGRTFPFIQPQ----FLHGG---GTVRPLLFTDVYGRAEFVAHGYPIRFDPA 183
                   VGR FPF+  Q     L GG   G   P+LF + +G +  +   YP+RFD A
Sbjct: 166 CFGSGNGLVGR-FPFVYQQPGVVALGGGCVTGAAPPVLFLNGFGGSNLMGSVYPVRFDSA 225

Query: 184 TVDLTSRFTGGIQTDTNSSSLVDFRPAKEILNLDLNLAPPV 208
            +          +T+++S + VD +P + +LNLDLNLAPPV
Sbjct: 226 GIGFNGAVRNETETESSSVAAVDCKP-RRVLNLDLNLAPPV 263

[Close]

BLAST of CSPI07G04890.1 vs. TAIR10
Match: AT3G15210.1 (AT3G15210.1 ethylene responsive element binding factor 4)

HSP 1 Score: 161.8 bits (408), Expect = 4.7e-40
Identity = 103/214 (48.13%), Postives = 129/214 (60.28%), Query Frame = 1


Query: 12  SNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTAARQFRGAK 71
           ++NNAK++ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAARAYDTAAR FRGAK
Sbjct: 16  THNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAK 75

Query: 72  AKTNFPLPDDFIDVS----PHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSYGVGRTFP 131
           AKTNFP    F+++S    P    +SPS +STLD +S       P   +  S   G   P
Sbjct: 76  AKTNFP---TFLELSDQKVPTGFARSPSQSSTLDCAS-------PPTLVVPSATAGNVPP 135

Query: 132 FIQPQFLHGGG-------TVRPLLFTDVYGRAEFVAHGYP----IRFDPATVDLTSRFTG 191
            ++     GGG         RP+ F D+ G    V  G P      F    V + ++   
Sbjct: 136 QLELSLGGGGGGSCYQIPMSRPVYFLDLMGIGN-VGRGQPPPVTSAFRSPVVHVATKMAC 195

Query: 192 GIQTDTNSSSLVDFRPAKE----ILNLDLNLAPP 207
           G Q+D++SSS+VDF    E    +L+LDLNL PP
Sbjct: 196 GAQSDSDSSSVVDFEGGMEKRSQLLDLDLNLPPP 218

[Close]

BLAST of CSPI07G04890.1 vs. TAIR10
Match: AT5G44210.1 (AT5G44210.1 erf domain protein 9)

HSP 1 Score: 144.8 bits (364), Expect = 5.9e-35
Identity = 92/194 (47.42%), Postives = 116/194 (59.79%), Query Frame = 1


Query: 17  KDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTAARQFRGAKAKTNF 76
           K++HFRGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAARAYDTAAR+FRG+KAKTNF
Sbjct: 29  KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 77  PLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSYGVGRTFPFIQPQFLHG 136
           PLP +   V+    N S    +T+ ++   T ++ P             F   + + + G
Sbjct: 89  PLPGESTTVNDGGENDSYVNRTTVTTAREMTRQRFP-------------FACHRERKVVG 148

Query: 137 GGTVRPLLFTDVYG---RAEFVAHGYPIRFDPATVDLTSRFTGGIQTDTNSSSLVDFRPA 196
           G       F        RAE ++   P+RFDP  ++L+     GI+        V   P 
Sbjct: 149 GYASAGFFFDPSRAASLRAE-LSRVCPVRFDPVNIELSI----GIR------ETVKVEPR 197

Query: 197 KEILNLDLNLAPPV 208
           +E LNLDLNLAPPV
Sbjct: 209 RE-LNLDLNLAPPV 197

[Close]

BLAST of CSPI07G04890.1 vs. TAIR10
Match: AT1G53170.1 (AT1G53170.1 ethylene response factor 8)

HSP 1 Score: 129.0 bits (323), Expect = 3.4e-30
Identity = 85/204 (41.67%), Postives = 110/204 (53.92%), Query Frame = 1


Query: 13  NNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTAARQFRGAKA 72
           +N AK++ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTA++AARAYD AAR FRG KA
Sbjct: 23  SNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKA 82

Query: 73  KTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSYGVG----RTFPF 132
           KTNF +              SP+ +ST+  S ++    TP P +  S G G    R  P 
Sbjct: 83  KTNFGV----------IVGSSPTQSSTVVDSPTAARFITP-PHLELSLGGGGACRRKIPL 142

Query: 133 IQPQFLHGGGTVRPLLFTDVYGRAEFVAHGYPIRFDPATVDLTSRFTGGIQTDTNSSSLV 192
           + P + +   T                   YP              T G+Q+++ +SS+V
Sbjct: 143 VHPVYYYNMAT-------------------YP-----------KMTTCGVQSESETSSVV 185

Query: 193 DFR----PAKEILNLDLNLAPPVD 209
           DF          L+LDLNLAPP +
Sbjct: 203 DFEGGAGKISPPLDLDLNLAPPAE 185

[Close]

BLAST of CSPI07G04890.1 vs. TAIR10
Match: AT1G50640.1 (AT1G50640.1 ethylene responsive element binding factor 3)

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-25
Identity = 51/66 (77.27%), Postives = 59/66 (89.39%), Query Frame = 1


Query: 13 NNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTAARQFRGAKA 72
          N + K++ FRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+AEEAARAYD+AAR  RG KA
Sbjct: 20 NGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKA 79

Query: 73 KTNFPL 79
          KTNFP+
Sbjct: 80 KTNFPI 85

[Close]

BLAST of CSPI07G04890.1 vs. TAIR10
Match: AT3G20310.1 (AT3G20310.1 ethylene response factor 7)

HSP 1 Score: 111.3 bits (277), Expect = 7.3e-25
Identity = 56/86 (65.12%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 7  SLPSLSNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTAARQ 66
          +LP  +  + K+  +RGVRKRPWGR+AAEIRDP KKSRVWLGTFD+A +AARAYDTAAR 
Sbjct: 13 ALPVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARN 72

Query: 67 FRGAKAKTNFPLPDDFIDVSPHNTNQ 93
           RG KAKTNFP     ID SP +  Q
Sbjct: 73 LRGPKAKTNFP-----IDCSPSSPLQ 93

[Close]

BLAST of CSPI07G04890.1 vs. NCBI nr
Match: gi|449438123|ref|XP_004136839.1| (PREDICTED: ethylene-responsive transcription factor 4-like [Cucumis sativus])

HSP 1 Score: 422.5 bits (1085), Expect = 4.2e-115
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1


Query: 1   MVANQKSLPSLSNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAY 60
           MVANQKSLPSLSNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAY
Sbjct: 1   MVANQKSLPSLSNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAY 60

Query: 61  DTAARQFRGAKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSY 120
           DTAARQFRGAKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSY
Sbjct: 61  DTAARQFRGAKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSY 120

Query: 121 GVGRTFPFIQPQFLHGGGTVRPLLFTDVYGRAEFVAHGYPIRFDPATVDLTSRFTGGIQT 180
           GVGRTFPFIQPQFLHGGGTVRPLLFTDVYGRAEFVAHGYPIRFDPATVDLTSRFTGGIQT
Sbjct: 121 GVGRTFPFIQPQFLHGGGTVRPLLFTDVYGRAEFVAHGYPIRFDPATVDLTSRFTGGIQT 180

Query: 181 DTNSSSLVDFRPAKEILNLDLNLAPPVDA 210
           DTNSSSLVDFRPAKEILNLDLNLAPPVDA
Sbjct: 181 DTNSSSLVDFRPAKEILNLDLNLAPPVDA 209

[Close]

BLAST of CSPI07G04890.1 vs. NCBI nr
Match: gi|659110551|ref|XP_008455284.1| (PREDICTED: LOW QUALITY PROTEIN: ethylene-responsive transcription factor 4 [Cucumis melo])

HSP 1 Score: 373.2 bits (957), Expect = 2.9e-100
Identity = 187/214 (87.38%), Postives = 199/214 (92.99%), Query Frame = 1


Query: 1   MVANQKSLP----SLSNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEA 60
           MVA +KS P    SLSNNN KDLHFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEA
Sbjct: 33  MVAKEKSSPQQPPSLSNNNGKDLHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEA 92

Query: 61  ARAYDTAARQFRGAKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEI 120
           ARAYDTAARQFRGAKAKTNFP PD+ IDVSPH  NQSPSP+ST+DSSSSS+HEKTPSPEI
Sbjct: 93  ARAYDTAARQFRGAKAKTNFPPPDELIDVSPHKINQSPSPSSTVDSSSSSSHEKTPSPEI 152

Query: 121 ARSYGVGRTFPFIQPQFLH-GGGTVRPLLFTDVYGRAEFVAHGYPIRFDPATVDLTSRFT 180
           +RSYGVGRTFPFIQPQFLH GGG+VRP+LF DV+G+ EFVAHGYPIRFDPATVDLTSRFT
Sbjct: 153 SRSYGVGRTFPFIQPQFLHGGGGSVRPVLFVDVFGKPEFVAHGYPIRFDPATVDLTSRFT 212

Query: 181 GGIQTDTNSSSLVDFRPAKEILNLDLNLAPPVDA 210
           GGIQ+D+NSSSLVDFRPAKEILNLDLNLAPPVDA
Sbjct: 213 GGIQSDSNSSSLVDFRPAKEILNLDLNLAPPVDA 246

[Close]

BLAST of CSPI07G04890.1 vs. NCBI nr
Match: gi|559783566|gb|AHB18381.1| (ethylene-responsive transcription factor [Momordica charantia])

HSP 1 Score: 301.6 bits (771), Expect = 1.1e-78
Identity = 158/229 (69.00%), Postives = 181/229 (79.04%), Query Frame = 1


Query: 1   MVANQKSLP---SLSNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAA 60
           MVA +KS     + ++NN ++LHFRGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAA
Sbjct: 1   MVAREKSTAKKLTATSNNGRELHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAA 60

Query: 61  RAYDTAARQFRGAKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIA 120
           RAYDTAARQFRGAKAKTNFPLP++ I+VSPH  N SPS +ST++SSSSS+ EK+PS EI 
Sbjct: 61  RAYDTAARQFRGAKAKTNFPLPEELIEVSPHKINHSPSASSTVESSSSSSQEKSPSSEIF 120

Query: 121 RSYG----VGRTFPFIQPQF------------LHGGGTVRPLLFTDVYGRAEFVAHGYPI 180
           R YG     GRTFPFIQPQF                   RP+LF D +GR EFVAHGYP+
Sbjct: 121 RGYGGALNAGRTFPFIQPQFQPQVMVGCNASASAAAANARPVLFMDAFGRPEFVAHGYPL 180

Query: 181 RFDPATVDLTSRFTGGI-QTDTNSSSLVDFRPAKEILNLDLNLAPPVDA 210
           RFDPATVDLT+RF GGI Q+D++SSS+VD RPAKEILNLDLNLAPPVDA
Sbjct: 181 RFDPATVDLTARFAGGIHQSDSDSSSVVDCRPAKEILNLDLNLAPPVDA 229

[Close]

BLAST of CSPI07G04890.1 vs. NCBI nr
Match: gi|388502912|gb|AFK39522.1| (unknown [Lotus japonicus])

HSP 1 Score: 205.7 bits (522), Expect = 8.0e-50
Identity = 124/218 (56.88%), Postives = 147/218 (67.43%), Query Frame = 1


Query: 13  NNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTAARQFRGAKA 72
           +NNA ++HFRGVRKRPWGRY+AEIRDP KKSRVWLGTFDTAEEAARAYD AARQFRG KA
Sbjct: 33  SNNATEVHFRGVRKRPWGRYSAEIRDPGKKSRVWLGTFDTAEEAARAYDAAARQFRGPKA 92

Query: 73  KTNFPL---------PDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIARSYG-V 132
           KTNFP          P+D + V+    NQSPS +ST++SS       TP  +I R  G V
Sbjct: 93  KTNFPQSPSPDNNTGPNDVV-VANVKANQSPSQSSTVESS-------TPERDITRGGGVV 152

Query: 133 GRTFPF--IQPQFL---HGGG------TVRPLLFTDVYGRAEFVAHGYPIRFDPATVDLT 192
              FPF  + PQ L    GGG       VRP++F D   +AEF A  +P+RF+   VD T
Sbjct: 153 VDRFPFLPLHPQQLMPFSGGGDVVYTAPVRPVIFLDPASQAEFFAQRFPVRFESGPVDFT 212

Query: 193 SRFTGGIQTDTNSSSLVDFRPAKEILNLDLNLAPPVDA 210
             F GGIQ+D++SSS+VD RP K  LNLDLNLAPP +A
Sbjct: 213 GMFGGGIQSDSDSSSVVDCRP-KPTLNLDLNLAPPNEA 241

[Close]

BLAST of CSPI07G04890.1 vs. NCBI nr
Match: gi|502144028|ref|XP_004505555.1| (PREDICTED: ethylene-responsive transcription factor 9 [Cicer arietinum])

HSP 1 Score: 205.3 bits (521), Expect = 1.0e-49
Identity = 121/212 (57.08%), Postives = 143/212 (67.45%), Query Frame = 1


Query: 14  NNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDTAARQFRGAKAK 73
           NNA ++HFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAARAYD AARQFRG KAK
Sbjct: 17  NNAAEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAARQFRGPKAK 76

Query: 74  TNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPEIAR----SYGVGRTFPF- 133
           TNFP P D  + +  N NQSPS +ST++SS       TP  EI R    S GV   FPF 
Sbjct: 77  TNFPPPSDIKEDNNVN-NQSPSQSSTVESS-------TPEREITRPREVSGGVMDRFPFL 136

Query: 134 -IQPQFLHGGGT-----------VRPLLFTDVYGRAEFVAHGYPIRFDPATVDLTSRFTG 193
            IQ Q++   GT           V P+ F D   RAEF+   +  RF+P+ V+    F G
Sbjct: 137 SIQQQYMPFSGTGGVAVDGMVTAVHPVFFLDPAARAEFLNQRFSPRFEPSPVEFNIGFCG 196

Query: 194 GIQTDTNSSSLVDFRPAKEILNLDLNLAPPVD 209
           G+Q+D++SSS+VD +P K  LNLDLNLAPP+D
Sbjct: 197 GVQSDSDSSSVVDCQP-KRALNLDLNLAPPMD 219

The following BLAST results are available for this feature:

BLAST of CSPI07G04890.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF78_ARATH	8.3e-39	48.13	Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 ...	[more]
ERF80_ARATH	1.1e-33	47.42	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 ...	[more]
ERF4_NICSY	7.0e-30	66.02	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 ...	[more]
ERF79_ARATH	6.0e-29	41.67	Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 ...	[more]
ERF4_TOBAC	7.8e-29	64.08	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=...	[more]

BLAST of CSPI07G04890.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K742_CUCSA	2.9e-115	100.00	Ethylene-responsive element-binding protein OS=Cucumis sativus GN=Csa_7G049230 P...	[more]
V5QP37_MOMCH	7.5e-79	69.00	Ethylene-responsive transcription factor OS=Momordica charantia PE=2 SV=1	[more]
I3SGY0_LOTJA	5.6e-50	56.88	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
Q2I2S8_MEDTR	2.6e-47	54.55	Ethylene response factor OS=Medicago truncatula GN=ERF-6 PE=2 SV=1	[more]
V4U3I7_9ROSI	3.7e-46	51.13	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016276mg PE=4 SV=1	[more]

BLAST of CSPI07G04890.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15210.1	4.7e-40	48.13	ethylene responsive element binding factor 4	[more]
AT5G44210.1	5.9e-35	47.42	erf domain protein 9	[more]
AT1G53170.1	3.4e-30	41.67	ethylene response factor 8	[more]
AT1G50640.1	1.9e-25	77.27	ethylene responsive element binding factor 3	[more]
AT3G20310.1	7.3e-25	65.12	ethylene response factor 7	[more]

BLAST of CSPI07G04890.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438123\|ref\|XP_004136839.1\|	4.2e-115	100.00	PREDICTED: ethylene-responsive transcription factor 4-like [Cucumis sativus]	[more]
gi\|659110551\|ref\|XP_008455284.1\|	2.9e-100	87.38	PREDICTED: LOW QUALITY PROTEIN: ethylene-responsive transcription factor 4 [Cucu...	[more]
gi\|559783566\|gb\|AHB18381.1\|	1.1e-78	69.00	ethylene-responsive transcription factor [Momordica charantia]	[more]
gi\|388502912\|gb\|AFK39522.1\|	8.0e-50	56.88	unknown [Lotus japonicus]	[more]
gi\|502144028\|ref\|XP_004505555.1\|	1.0e-49	57.08	PREDICTED: ethylene-responsive transcription factor 9 [Cicer arietinum]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI07G04890	CSPI07G04890	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI07G04890.1	CSPI07G04890.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G04890.1.utr5p1	CSPI07G04890.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G04890.1.cds1	CSPI07G04890.1.cds1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G04890.1.utr3p1	CSPI07G04890.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 43..59 score: 4.0E-11coord: 21..32 score: 4.0
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 20..77 score: 1.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 20..69 score: 3.9
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 20..83 score: 1.4
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 20..77 score: 23
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 20..78 score: 1.83
None	No IPR available	PANTHER	PTHR31677	FAMILY NOT NAMED	coord: 13..208 score: 9.3