CSPI06G19000.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G19000.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Copper transporter
Location	Chr6 : 17209622 .. 17211035 (+)
Sequence length	429

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAGTTTTTTTTATATAAAAGAATAAAATTATGATAATATTTAGAATAATTGTTATATAAAATTAAAACTATTTTTAAAACTATATTGATTTTTTATAATTAAATACTTTTAAAACAAAATTGAAATGTGGTATGTGATTCAAAAGATGTGTTTACTCTTAGGTGGAGGGTTTAAAACGACCCGTTTAGCCGAACCCCAACAACAAAACTAGTCTTCTTTACCAAATTCTCACTCTCTCTATCTCTCCGATTTCGTGACTTTTGCTGCAGAGAGCGAAGATGATGCACATGACCTTTTACTGGAGCAGGGAGGTGACTCTCCTCGTCAATTCATGGCGGACAACTTCATGGTTTAGCTATTCCCTCTCTTTGCTTGCTTGTTTCATCGTCTCCATTTTCTACCAGTATTTGGAGAATTATCGAATCCGTTTGAAGCTTCTTCACTGTCCGAAGCCGTCGCCGTCGGAGATCGAGGCCCCTCTCCTTCGATCTAAAGTGGCTGGGAAGTTTCAGGCTGTGAGATTTGCTGGAGCTCTGTTTTTCGGAGTCAACTCGGCGATTGGCTACCTTCTTATGCTCGCGATCATGTCCTTCAATGGCGGGGTTTTCATTGCAATTGTCTTTGGGCTCGCGATAGGTTATTTGGTGTTTAGGAGCGACGATGAGGACGTTATTGTTAGTGCGGAAAATCCTTGTGCATGTGCTTAGGATCAACAAACAGATAAGATCAGAAAGAAACAATTGCTATATCTGCTTCTTTCAATTATGAATAGGTTTCTTTCATCGTGTTCGTTTCTTGCAAAATTGATTGGCTCTGTTGTACAATTCTTGTTATTTCAGAATTTGTAGCTTTGTTTTAATGTATTATGGGTAGAAATTTTGTGCATAGATATGGTAAAATATCACGATTGGGAAAGAAAATCCGTCAGATTGGGGAAATTGAACAGCCAAATTGGGGTAATGGGATTGGAAAGTGAAACTGAGGTAAGATGCCCCATACATCAGATCCATCCTTTTCTGTTCTGAAGATAAGAGTGCAGATAATGGCATTTTCAATGATCCAAATTTATAAAATCTGGAGAAGGAACCAACAAAGTTTAACTTTTGATTTCAAATTTTCAATGACCAATCATCATTCTATCTTCTTGGGACTGGGAAAGAATGCATTTTCTGGATTTGGGCTGAGTTTGTATTCTAGCTTCCTTGTGCTTGTTTTAGATTTATCTCTTTGGTTTAGAATCTCCTAAAACATTTAACTCTGTATTTGGAGGTTTGGCTAGTCATGGTTGTGAGCTAAAACATTTCGGACTCAATTTAGGTGCATAGCTCTTCTAATTTATGTTGTTTCAATGACCTTTGTTTGTTGAGCTCTGGAAGATTGAGTTTCTTGCAAGTGCATGTGAGAGATTACCC

mRNA sequence

ATGATGCACATGACCTTTTACTGGAGCAGGGAGGTGACTCTCCTCGTCAATTCATGGCGGACAACTTCATGGTTTAGCTATTCCCTCTCTTTGCTTGCTTGTTTCATCGTCTCCATTTTCTACCAGTATTTGGAGAATTATCGAATCCGTTTGAAGCTTCTTCACTGTCCGAAGCCGTCGCCGTCGGAGATCGAGGCCCCTCTCCTTCGATCTAAAGTGGCTGGGAAGTTTCAGGCTGTGAGATTTGCTGGAGCTCTGTTTTTCGGAGTCAACTCGGCGATTGGCTACCTTCTTATGCTCGCGATCATGTCCTTCAATGGCGGGGTTTTCATTGCAATTGTCTTTGGGCTCGCGATAGGTTATTTGGTGTTTAGGAGCGACGATGAGGACGTTATTGTTAGTGCGGAAAATCCTTGTGCATGTGCTTAG

Coding sequence (CDS)

ATGATGCACATGACCTTTTACTGGAGCAGGGAGGTGACTCTCCTCGTCAATTCATGGCGGACAACTTCATGGTTTAGCTATTCCCTCTCTTTGCTTGCTTGTTTCATCGTCTCCATTTTCTACCAGTATTTGGAGAATTATCGAATCCGTTTGAAGCTTCTTCACTGTCCGAAGCCGTCGCCGTCGGAGATCGAGGCCCCTCTCCTTCGATCTAAAGTGGCTGGGAAGTTTCAGGCTGTGAGATTTGCTGGAGCTCTGTTTTTCGGAGTCAACTCGGCGATTGGCTACCTTCTTATGCTCGCGATCATGTCCTTCAATGGCGGGGTTTTCATTGCAATTGTCTTTGGGCTCGCGATAGGTTATTTGGTGTTTAGGAGCGACGATGAGGACGTTATTGTTAGTGCGGAAAATCCTTGTGCATGTGCTTAG

Homology

[Close]

BLAST of CSPI06G19000.1 vs. Swiss-Prot
Match: COP51_ORYSJ (Copper transporter 5.1 OS=Oryza sativa subsp. japonica GN=COPT5.1 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 6.9e-37
Identity = 85/150 (56.67%), Postives = 106/150 (70.67%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHMTFYW ++VT+L + WRT +W  Y LSL+A  + S FYQYLE +RIR+KLL   KP+
Sbjct: 1   MMHMTFYWGKDVTILFDGWRTATWTGYLLSLVALLLASAFYQYLEAFRIRVKLLAGAKPA 60

Query: 61  ----PSEIEAP----LLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIA 120
               P+  +A     LL S  AG++ A R A A  FGVNS +GYLLMLA+MSFNGGVF+A
Sbjct: 61  SIPPPASSDAARAPLLLPSSAAGRWPA-RLATAGLFGVNSGLGYLLMLAVMSFNGGVFVA 120

Query: 121 IVFGLAIGYLVFRSDDEDVIVSAENPCACA 143
           +V GLA GYL FRS D + +V  +NPCACA
Sbjct: 121 VVVGLAAGYLAFRSSDGEDLVVVDNPCACA 149

[Close]

BLAST of CSPI06G19000.1 vs. Swiss-Prot
Match: COPT5_ARATH (Copper transporter 5 OS=Arabidopsis thaliana GN=COPT5 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.9e-35
Identity = 81/148 (54.73%), Postives = 99/148 (66.89%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHMTFYW  + T+L + W+T SW SY L+L+ACF+ S FYQYLEN RI+ K L   + +
Sbjct: 1   MMHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRA 60

Query: 61  P------SEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIV 120
           P      S + APL+    +G   A + A  L FGVN+AIGYLLMLA MSFNGGVFIAIV
Sbjct: 61  PPPPRSSSGVSAPLIPK--SGTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIV 120

Query: 121 FGLAIGYLVFRSDDEDVIVSAENPCACA 143
            GL  GY VFRSDD     + ++PC CA
Sbjct: 121 VGLTAGYAVFRSDDGGADTATDDPCPCA 146

[Close]

BLAST of CSPI06G19000.1 vs. Swiss-Prot
Match: COP52_ORYSJ (Putative copper transporter 5.2 OS=Oryza sativa subsp. japonica GN=COPT5.2 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.4e-23
Identity = 71/176 (40.34%), Postives = 95/176 (53.98%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHM+FYW   VT+L + WRT+ W  Y  SLLA F+ +  YQ+LE  R+RL+     +  
Sbjct: 1   MMHMSFYWGTSVTILFDGWRTSGWPGYLASLLALFLAAALYQHLEARRVRLRAGRRHRAG 60

Query: 61  --------------PSEIEAPLLRSKVAGKF---------------QAVRFAGALFFGVN 120
                         P+  +A  L S   G+                 A   A A  FG++
Sbjct: 61  GGGGAASSAAGPVVPAASDARALLSAAGGRLGLGLGLGRRWMKEPRAAASAAAAALFGLS 120

Query: 121 SAIGYLLMLAIMSFNGGVFIAIVFGLAIGYLVFR--SDDEDVIV---SAENPCACA 143
           +A+GYLLMLA+MSFNGGVF+A+V GLA G+L FR  +D+ D  V     E+PCACA
Sbjct: 121 AAVGYLLMLAVMSFNGGVFLAVVAGLAAGHLAFRGGADEADGGVGDDELESPCACA 176

[Close]

BLAST of CSPI06G19000.1 vs. Swiss-Prot
Match: COPT3_ARATH (Copper transporter 3 OS=Arabidopsis thaliana GN=COPT3 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-10
Identity = 42/126 (33.33%), Postives = 65/126 (51.59%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHMTF+W +   +L + W  TS   Y + L   F++S F + L             K  
Sbjct: 29  MMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFM-------KSG 88

Query: 61  PSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIG 120
           P+ +   LL++ V              + V +A+ YL+MLA+MSFNGGVF+A + G  +G
Sbjct: 89  PASLGGGLLQTAV--------------YTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLG 133

Query: 121 YLVFRS 127
           +++F S
Sbjct: 149 FMIFGS 133

[Close]

BLAST of CSPI06G19000.1 vs. Swiss-Prot
Match: COPT2_ORYSJ (Copper transporter 2 OS=Oryza sativa subsp. japonica GN=COPT2 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.4e-10
Identity = 44/125 (35.20%), Postives = 65/125 (52.00%), Query Frame = 1


Query: 2   MHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPSP 61
           MHMTF+W +   +L   W       Y+L++L  F +++  ++   YR+            
Sbjct: 23  MHMTFFWGKNTEVLFTLWPGARGGMYALAILFMFALAVLLEF-RGYRV------------ 82

Query: 62  SEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIGY 121
             +EA L R +      A+R A      V   + YL+MLA+MSFNGGVF+AIV G A G+
Sbjct: 83  --LEARLARRRAPRAAAALRTA---VHAVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGF 129

Query: 122 LVFRS 127
           L FR+
Sbjct: 143 LAFRA 129

[Close]

BLAST of CSPI06G19000.1 vs. TrEMBL
Match: A0A0A0KIJ7_CUCSA (Copper transporter OS=Cucumis sativus GN=Csa_6G361380 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.0e-71
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHMTFYWSREVTLL+NSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLL CPKPS
Sbjct: 1   MMHMTFYWSREVTLLINSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLQCPKPS 60

Query: 61  PSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIG 120
           PSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIG
Sbjct: 61  PSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIG 120

Query: 121 YLVFRSDDEDVIVSAENPCACA 143
           YLVFRSDDEDVIVSAENPCACA
Sbjct: 121 YLVFRSDDEDVIVSAENPCACA 142

[Close]

BLAST of CSPI06G19000.1 vs. TrEMBL
Match: A0A067G543_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043576mg PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 9.1e-44
Identity = 91/143 (63.64%), Postives = 112/143 (78.32%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHC-PKP 60
           MMHMTFYW R+VTLL + WRT SW SY+L+LLACF+ S FYQYLE+ R+RL  +    KP
Sbjct: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60

Query: 61  SPSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAI 120
           + +++E PLL+ KV GKF A R AG   FG+NS +GYLLMLAIMSFNGGVF+A+V GL I
Sbjct: 61  AIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMI 120

Query: 121 GYLVFRSDDEDVIVSAENPCACA 143
           GYLVFRS+ +DV +  +NPCACA
Sbjct: 121 GYLVFRSESDDVTLVVDNPCACA 143

[Close]

BLAST of CSPI06G19000.1 vs. TrEMBL
Match: V4U068_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009830mg PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 91/143 (63.64%), Postives = 112/143 (78.32%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHC-PKP 60
           MMHMTFYW R+VTLL + WRT SW SY+L+LLACF+ S FYQYLE+ R+RL  +    KP
Sbjct: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60

Query: 61  SPSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAI 120
           + +++E PLL+ KV GKF A R AG   FG+NS +GYLLMLAIMSFNGGVF+A+V GL I
Sbjct: 61  AIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVVGLMI 120

Query: 121 GYLVFRSDDEDVIVSAENPCACA 143
           GYLVFRS+ +DV +  +NPCACA
Sbjct: 121 GYLVFRSESDDVTLVVDNPCACA 143

[Close]

BLAST of CSPI06G19000.1 vs. TrEMBL
Match: G7J942_MEDTR (Ctr family copper transporter OS=Medicago truncatula GN=MTR_3g105330 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-43
Identity = 98/144 (68.06%), Postives = 116/144 (80.56%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHMTFYWS++VTLL +SW+T SW SY+LSLLAC IVSIFYQ+LEN RIRLKLL   KP 
Sbjct: 1   MMHMTFYWSKKVTLLFDSWKTDSWTSYALSLLACLIVSIFYQFLENRRIRLKLLASGKPF 60

Query: 61  PSEIEAPLLRSKVAGKFQ--AVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLA 120
           P+ IEAPLLR   AG      VR AGA+ FG++SAIGY LML++MS+NGGVFIAIV GLA
Sbjct: 61  PAAIEAPLLRRTFAGSGAKLGVRVAGAVLFGLSSAIGYFLMLSVMSYNGGVFIAIVVGLA 120

Query: 121 IGYLVFRSDDEDVIVSAENPCACA 143
           +GYL+FRSD ED +V  ++ CACA
Sbjct: 121 VGYLLFRSDGEDSVV-VDSSCACA 143

[Close]

BLAST of CSPI06G19000.1 vs. TrEMBL
Match: M5XTG8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012919mg PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.5e-43
Identity = 95/149 (63.76%), Postives = 116/149 (77.85%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPK-- 60
           MMHMTFYWS++VT+L++SWRTTSW SYSL+L+AC IVS FYQYLE+ R+RLK        
Sbjct: 1   MMHMTFYWSKDVTILIDSWRTTSWTSYSLTLIACLIVSAFYQYLEDLRVRLKTASSSAAK 60

Query: 61  -PSPSEIEAPLLRSKV---AGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIV 120
             SP+ I+ PLL +K+    G+F A R  GA+ FGVN+AIGYLLMLA+MSFNGGVF+AIV
Sbjct: 61  ISSPAPIQTPLLGAKLDGAGGRFSAARLGGAVLFGVNAAIGYLLMLAVMSFNGGVFVAIV 120

Query: 121 FGLAIGYLVFRSDDEDVIVS-AENPCACA 143
            GLAIGYL FRS D+DV  +  +NPCACA
Sbjct: 121 VGLAIGYLAFRSGDDDVAATVVDNPCACA 149

[Close]

BLAST of CSPI06G19000.1 vs. TAIR10
Match: AT5G20650.1 (AT5G20650.1 copper transporter 5)

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-36
Identity = 81/148 (54.73%), Postives = 99/148 (66.89%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHMTFYW  + T+L + W+T SW SY L+L+ACF+ S FYQYLEN RI+ K L   + +
Sbjct: 1   MMHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRA 60

Query: 61  P------SEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIV 120
           P      S + APL+    +G   A + A  L FGVN+AIGYLLMLA MSFNGGVFIAIV
Sbjct: 61  PPPPRSSSGVSAPLIPK--SGTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIV 120

Query: 121 FGLAIGYLVFRSDDEDVIVSAENPCACA 143
            GL  GY VFRSDD     + ++PC CA
Sbjct: 121 VGLTAGYAVFRSDDGGADTATDDPCPCA 146

[Close]

BLAST of CSPI06G19000.1 vs. TAIR10
Match: AT5G59040.1 (AT5G59040.1 copper transporter 3)

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 42/126 (33.33%), Postives = 65/126 (51.59%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHMTF+W +   +L + W  TS   Y + L   F++S F + L             K  
Sbjct: 29  MMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFM-------KSG 88

Query: 61  PSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIG 120
           P+ +   LL++ V              + V +A+ YL+MLA+MSFNGGVF+A + G  +G
Sbjct: 89  PASLGGGLLQTAV--------------YTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLG 133

Query: 121 YLVFRS 127
           +++F S
Sbjct: 149 FMIFGS 133

[Close]

BLAST of CSPI06G19000.1 vs. TAIR10
Match: AT2G26975.1 (AT2G26975.1 Ctr copper transporter family)

HSP 1 Score: 62.4 bits (150), Expect = 2.6e-10
Identity = 38/126 (30.16%), Postives = 65/126 (51.59%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHMTF+W +   +L + W  TS   Y L L+  F++++  ++L +              
Sbjct: 24  MMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAH-------------- 83

Query: 61  PSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIG 120
                + +LR +     +A        + + + + YL+MLA+MSFNGGVFI  + G A+G
Sbjct: 84  -----SSILRGR-GSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVG 129

Query: 121 YLVFRS 127
           +++F S
Sbjct: 144 FMLFGS 129

[Close]

BLAST of CSPI06G19000.1 vs. TAIR10
Match: AT3G46900.1 (AT3G46900.1 copper transporter 2)

HSP 1 Score: 61.6 bits (148), Expect = 4.5e-10
Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHMTF+W +   +L + W  TS   Y+L L+  F++++  ++L +              
Sbjct: 29  MMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAH-------------- 88

Query: 61  PSEIEAPLLRSKVAGKF-QAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAI 120
                +P+LR  V+G   +A   A    + + + + YL+MLA+MSFN GVFI  + G  +
Sbjct: 89  -----SPILR--VSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGV 134

Query: 121 GYLVFRS 127
           G+ +F S
Sbjct: 149 GFFLFGS 134

[Close]

BLAST of CSPI06G19000.1 vs. TAIR10
Match: AT5G59030.1 (AT5G59030.1 copper transporter 1)

HSP 1 Score: 59.7 bits (143), Expect = 1.7e-09
Identity = 45/151 (29.80%), Postives = 71/151 (47.02%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHMTF+W +   +L + W  TS   Y+L L+  F +++  ++L +              
Sbjct: 41  MMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAH-------------- 100

Query: 61  PSEIEAPLLRSKVAGKFQAVRFAGAL---FFGVNSAIGYLLMLAIMSFNGGVFIAIVFGL 120
                + LLR        A R AG +    + +   + YL+MLA+MSFN GVF+  + G 
Sbjct: 101 -----SSLLRGSTGDS--ANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGH 160

Query: 121 AIGYLVF-------RSDDEDVIVSAENPCAC 142
           A+G+++F        SDD        + CAC
Sbjct: 161 AVGFMLFGSQTFRNTSDDRKTNYVPPSGCAC 170

[Close]

BLAST of CSPI06G19000.1 vs. NCBI nr
Match: gi|449452941|ref|XP_004144217.1| (PREDICTED: copper transporter 5.1 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 4.3e-71
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHMTFYWSREVTLL+NSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLL CPKPS
Sbjct: 1   MMHMTFYWSREVTLLINSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLQCPKPS 60

Query: 61  PSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIG 120
           PSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIG
Sbjct: 61  PSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIG 120

Query: 121 YLVFRSDDEDVIVSAENPCACA 143
           YLVFRSDDEDVIVSAENPCACA
Sbjct: 121 YLVFRSDDEDVIVSAENPCACA 142

[Close]

BLAST of CSPI06G19000.1 vs. NCBI nr
Match: gi|659089507|ref|XP_008445546.1| (PREDICTED: copper transporter 5.1 [Cucumis melo])

HSP 1 Score: 266.9 bits (681), Expect = 2.0e-68
Identity = 133/142 (93.66%), Postives = 138/142 (97.18%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHMTFYWS+EVTLL+NSWRT SW SYSLSLLACFIVS+FYQYLENYRIRLKLL CPKPS
Sbjct: 1   MMHMTFYWSKEVTLLINSWRTNSWLSYSLSLLACFIVSVFYQYLENYRIRLKLLQCPKPS 60

Query: 61  PSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIG 120
           PSEIEAPLLRSKVAGKFQA+RFAGALFFGVNSAIGYLLMLAIMSFNGGVF+AIVFGLAIG
Sbjct: 61  PSEIEAPLLRSKVAGKFQALRFAGALFFGVNSAIGYLLMLAIMSFNGGVFVAIVFGLAIG 120

Query: 121 YLVFRSDDEDVIVSAENPCACA 143
           YLVFRSDDEDVIVS ENPCACA
Sbjct: 121 YLVFRSDDEDVIVSVENPCACA 142

[Close]

BLAST of CSPI06G19000.1 vs. NCBI nr
Match: gi|1009134577|ref|XP_015884523.1| (PREDICTED: copper transporter 5.1-like [Ziziphus jujuba])

HSP 1 Score: 191.8 bits (486), Expect = 8.2e-46
Identity = 99/148 (66.89%), Postives = 117/148 (79.05%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHMTFYWS++VTLL++SWRT SW SY L+LLAC IVS FYQYLE+ R+RLKL    KPS
Sbjct: 1   MMHMTFYWSKQVTLLIDSWRTNSWTSYILTLLACLIVSAFYQYLEDLRLRLKLASAGKPS 60

Query: 61  PS----EIEAPLLR--SKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIV 120
           PS    +IE PLL+  S++ GK+   R  GA  FGVN+AIGYLLMLAIMSFNGGVF+A+V
Sbjct: 61  PSSSPAQIEIPLLQKFSRLQGKWSQARLGGAALFGVNAAIGYLLMLAIMSFNGGVFVAVV 120

Query: 121 FGLAIGYLVFRSDDEDVIVSAENPCACA 143
            GLAIGYLVFR  DED+ +  +NPCACA
Sbjct: 121 LGLAIGYLVFRGGDEDITLVVDNPCACA 148

[Close]

BLAST of CSPI06G19000.1 vs. NCBI nr
Match: gi|470135290|ref|XP_004303450.1| (PREDICTED: copper transporter 5.1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 189.1 bits (479), Expect = 5.3e-45
Identity = 94/144 (65.28%), Postives = 116/144 (80.56%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHCPKPS 60
           MMHMTFYWSR+VTLL +SW TT+W SY+L+LLAC IV  FYQYLE+ R+RL+L      +
Sbjct: 1   MMHMTFYWSRQVTLLFDSWSTTTWLSYALTLLACLIVPAFYQYLEDLRVRLRLASSAAKA 60

Query: 61  PSEIEAPLLRSKVA--GKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLA 120
              I+ PLLR K++  GKF AV+ AGA+ F VNSAIGY+LMLA+MSFNGGVF+AIV GLA
Sbjct: 61  SDPIQTPLLRGKLSAGGKFSAVKLAGAVIFAVNSAIGYMLMLAVMSFNGGVFVAIVVGLA 120

Query: 121 IGYLVFRSDDEDVIVSAENPCACA 143
           +GYL+FRS ++DV V+ ENPCACA
Sbjct: 121 VGYLLFRSGEDDVTVAVENPCACA 144

[Close]

BLAST of CSPI06G19000.1 vs. NCBI nr
Match: gi|568841131|ref|XP_006474514.1| (PREDICTED: copper transporter 5 [Citrus sinensis])

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-43
Identity = 91/143 (63.64%), Postives = 112/143 (78.32%), Query Frame = 1


Query: 1   MMHMTFYWSREVTLLVNSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLHC-PKP 60
           MMHMTFYW R+VTLL + WRT SW SY+L+LLACF+ S FYQYLE+ R+RL  +    KP
Sbjct: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60

Query: 61  SPSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAI 120
           + +++E PLL+ KV GKF A R AG   FG+NS +GYLLMLAIMSFNGGVF+A+V GL I
Sbjct: 61  AIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMI 120

Query: 121 GYLVFRSDDEDVIVSAENPCACA 143
           GYLVFRS+ +DV +  +NPCACA
Sbjct: 121 GYLVFRSESDDVTLVVDNPCACA 143

The following BLAST results are available for this feature:

BLAST of CSPI06G19000.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COP51_ORYSJ	6.9e-37	56.67	Copper transporter 5.1 OS=Oryza sativa subsp. japonica GN=COPT5.1 PE=2 SV=1	[more]
COPT5_ARATH	2.9e-35	54.73	Copper transporter 5 OS=Arabidopsis thaliana GN=COPT5 PE=1 SV=1	[more]
COP52_ORYSJ	4.4e-23	40.34	Putative copper transporter 5.2 OS=Oryza sativa subsp. japonica GN=COPT5.2 PE=3 ...	[more]
COPT3_ARATH	1.9e-10	33.33	Copper transporter 3 OS=Arabidopsis thaliana GN=COPT3 PE=2 SV=1	[more]
COPT2_ORYSJ	9.4e-10	35.20	Copper transporter 2 OS=Oryza sativa subsp. japonica GN=COPT2 PE=1 SV=1	[more]

BLAST of CSPI06G19000.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIJ7_CUCSA	3.0e-71	98.59	Copper transporter OS=Cucumis sativus GN=Csa_6G361380 PE=4 SV=1	[more]
A0A067G543_CITSI	9.1e-44	63.64	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043576mg PE=4 SV=1	[more]
V4U068_9ROSI	1.2e-43	63.64	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009830mg PE=4 SV=1	[more]
G7J942_MEDTR	2.0e-43	68.06	Ctr family copper transporter OS=Medicago truncatula GN=MTR_3g105330 PE=2 SV=1	[more]
M5XTG8_PRUPE	4.5e-43	63.76	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012919mg PE=4 SV=1	[more]

BLAST of CSPI06G19000.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20650.1	1.6e-36	54.73	copper transporter 5	[more]
AT5G59040.1	1.1e-11	33.33	copper transporter 3	[more]
AT2G26975.1	2.6e-10	30.16	Ctr copper transporter family	[more]
AT3G46900.1	4.5e-10	31.50	copper transporter 2	[more]
AT5G59030.1	1.7e-09	29.80	copper transporter 1	[more]

BLAST of CSPI06G19000.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452941\|ref\|XP_004144217.1\|	4.3e-71	98.59	PREDICTED: copper transporter 5.1 [Cucumis sativus]	[more]
gi\|659089507\|ref\|XP_008445546.1\|	2.0e-68	93.66	PREDICTED: copper transporter 5.1 [Cucumis melo]	[more]
gi\|1009134577\|ref\|XP_015884523.1\|	8.2e-46	66.89	PREDICTED: copper transporter 5.1-like [Ziziphus jujuba]	[more]
gi\|470135290\|ref\|XP_004303450.1\|	5.3e-45	65.28	PREDICTED: copper transporter 5.1 [Fragaria vesca subsp. vesca]	[more]
gi\|568841131\|ref\|XP_006474514.1\|	1.3e-43	63.64	PREDICTED: copper transporter 5 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007274	Cop_transporter

Vocabulary: **Molecular Function**
Term	Definition
GO:0005375	copper ion transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0035434	copper ion transmembrane transport

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0005773	vacuole
molecular_function	GO:0005375	copper ion transmembrane transporter activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI06G19000	CSPI06G19000	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI06G19000.1	CSPI06G19000.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G19000.1.utr5p1	CSPI06G19000.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G19000.1.cds1	CSPI06G19000.1.cds1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G19000.1.utr3p1	CSPI06G19000.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 1..141 score: 1.7
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 4..124 score: 2.8
None	No IPR available	PANTHER	PTHR12483:SF39	SUBFAMILY NOT NAMED	coord: 1..141 score: 1.7