CSPI06G12450.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G12450.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Histidine-containing phosphotransfer protein 1
Location	Chr6 : 10895643 .. 10896683 (+)
Sequence length	444

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTGTCTATTCTTAAAGGATTGCTCCAAGATTATGTTCAATCTCTGATTGAAGAGGTGACAACTAATATATTAGTTTCTTTTTCATTCAACTACTTACTTGTGTACACAATTCTTTCATCTTCAAGTTATTATTAATTTAACATTGTCGTAGTATGTCTTGTAGAGGATTGTTAATGAGAGGTTCTCCCAAATTCTAACAAAATTTGAAGAGCCTGATTGCGTTCAGCTGATCAATATTTATCTCAGAGATGTTGAATCAATCTTATCAGAACTTAGTATCACTGTGTAAGCTTTCTTTGATAATCTCACAAATTGTATTGTAGTTTTTCATTTGTTGACTAATAGCTTTAAATATGCAGTGATTCTTTGGACCTCGATTTCTCTAAGTTGAGTTTGTTGGCCAATAAAATAGAGAAGAAAAGCACTCGGTAGTTTACTATTCCTTTACTCTTTTGAATTTCTTAAAACTCATAGATCTACTAGATACAAATTAAAAGTTTAAGGTTGTATTAAACAAAATAAAATTCAATTCATATCTTATGGTCTAAATAATTTTAAAAGAGTATTTGTGATCCAAAGTGTTTATTTACAATTGTCTTGGATTTGTATTATTTAAGCATTTAGAAAAAGTGTATGTGTGTACGTGGCAGCATTGGTGCACAGCACATGAAGCTAGCAGCTACCCGTCTCATTGAAGCTTGTGATAAGGAGGACCAGAAAATGTAAGACTTTCAAATTTATACAAGTGTTAAATTTGGACTCTCAAACTTTTTTAGATTTTCTAACCATGTGATGGATAAACCACGTTGGTTTAGTGTCTCCCAAGACTTTAATTGGATGAAGCATGAATTCACCATTACCCAAAACAAATTTCAGCCCGTTATTCAGGTTTGATATATTACTAATAATTAATGATCTATAGCTTTTTGTTGATGTTTGATGTTTGATGTGTTGAAATAAGGTGAATGCTTTTGGTTATTATTGCAGATGGAACAGAGAATTTTGAGAGTGATGAGCAAGCCAAAGTATACATAG

mRNA sequence

ATGGCTTTGTCTATTCTTAAAGGATTGCTCCAAGATTATGTTCAATCTCTGATTGAAGAGAGGATTGTTAATGAGAGGTTCTCCCAAATTCTAACAAAATTTGAAGAGCCTGATTGCGTTCAGCTGATCAATATTTATCTCAGAGATGTTGAATCAATCTTATCAGAACTTAGTATCACTGTTGATTCTTTGGACCTCGATTTCTCTAAGTTGAGTTTGTTGGCCAATAAAATAGAGAAGAAAAGCACTCGCATTGGTGCACAGCACATGAAGCTAGCAGCTACCCGTCTCATTGAAGCTTGTGATAAGGAGGACCAGAAAATTGTCTCCCAAGACTTTAATTGGATGAAGCATGAATTCACCATTACCCAAAACAAATTTCAGCCCGTTATTCAGATGGAACAGAGAATTTTGAGAGTGATGAGCAAGCCAAAGTATACATAG

Coding sequence (CDS)

ATGGCTTTGTCTATTCTTAAAGGATTGCTCCAAGATTATGTTCAATCTCTGATTGAAGAGAGGATTGTTAATGAGAGGTTCTCCCAAATTCTAACAAAATTTGAAGAGCCTGATTGCGTTCAGCTGATCAATATTTATCTCAGAGATGTTGAATCAATCTTATCAGAACTTAGTATCACTGTTGATTCTTTGGACCTCGATTTCTCTAAGTTGAGTTTGTTGGCCAATAAAATAGAGAAGAAAAGCACTCGCATTGGTGCACAGCACATGAAGCTAGCAGCTACCCGTCTCATTGAAGCTTGTGATAAGGAGGACCAGAAAATTGTCTCCCAAGACTTTAATTGGATGAAGCATGAATTCACCATTACCCAAAACAAATTTCAGCCCGTTATTCAGATGGAACAGAGAATTTTGAGAGTGATGAGCAAGCCAAAGTATACATAG

Homology

[Close]

BLAST of CSPI06G12450.1 vs. Swiss-Prot
Match: AHP1_ARATH (Histidine-containing phosphotransfer protein 1 OS=Arabidopsis thaliana GN=AHP1 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.3e-10
Identity = 38/132 (28.79%), Postives = 80/132 (60.61%), Query Frame = 1


Query: 10  LQDYVQSLIEERIVNERFSQILTKFEE--PDCV-QLINIYLRDVESILSELSITVDSLDL 69
           LQDY +SL  E I++ +F Q+    +E  PD V Q++ ++ +D + IL++LS+++D   +
Sbjct: 10  LQDYTKSLFLEGILDSQFLQLQQLQDESNPDFVSQVVTLFFQDSDRILNDLSLSLDQQVV 69

Query: 70  DFSKLSLLANKIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMKHEFTITQNK 129
           DF K+    ++++  S+ IGAQ +K A       C++++ +   +    +K E+ + +N+
Sbjct: 70  DFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVKQEYYLVKNR 129

Query: 130 FQPVIQMEQRIL 139
            + + ++EQ+I+
Sbjct: 130 LETLFKLEQQIV 141

[Close]

BLAST of CSPI06G12450.1 vs. TrEMBL
Match: A0A0A0KB37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G151770 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 2.8e-72
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 1   MALSILKGLLQDYVQSLIEERIVNERFSQILTKFEEPDCVQLINIYLRDVESILSELSIT 60
           MALSILKGLLQDYVQSLIEERIVNERFSQILTKFEEPDCVQLINIYLRDVESILSELSIT
Sbjct: 1   MALSILKGLLQDYVQSLIEERIVNERFSQILTKFEEPDCVQLINIYLRDVESILSELSIT 60

Query: 61  VDSLDLDFSKLSLLANKIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMKHEF 120
           VDSLDLDFSKLSLLA+KIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMKHEF
Sbjct: 61  VDSLDLDFSKLSLLADKIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMKHEF 120

Query: 121 TITQNKFQPVIQMEQRILRVMSKPKYT 148
           TITQNKFQPVIQMEQRILRVMSKPKYT
Sbjct: 121 TITQNKFQPVIQMEQRILRVMSKPKYT 147

[Close]

BLAST of CSPI06G12450.1 vs. TrEMBL
Match: U5G0X4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s14820g PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.2e-28
Identity = 75/148 (50.68%), Postives = 105/148 (70.95%), Query Frame = 1


Query: 1   MALSILKGLLQDYVQSLIEERIVNERFSQILT--KFEEPD-CVQLINIYLRDVESILSEL 60
           MA+ I+KGLLQ YVQSL +E IVN +F  I T    EEPD  VQLIN Y  DVESIL EL
Sbjct: 1   MAMLIVKGLLQQYVQSLFDEGIVNAQFCHIQTLKTEEEPDHVVQLINTYCIDVESILFEL 60

Query: 61  SITVDSLDLDFSKLSLLANKIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMK 120
              +D  D+DFSKL+ LA ++E++S+ +GA+HM+LA   L++AC + D++ +S   NW+K
Sbjct: 61  GSYIDLPDVDFSKLAALAQQVEERSSLMGAEHMRLACADLVQACRQMDKRNLSLSLNWIK 120

Query: 121 HEFTITQNKFQPVIQMEQRILRVMSKPK 146
           +EF   + K + V+QME++I+R+ SK K
Sbjct: 121 NEFAHIRTKLEVVVQMERKIMRLESKHK 148

[Close]

BLAST of CSPI06G12450.1 vs. TrEMBL
Match: A0A0D2UD88_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G087000 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-26
Identity = 71/148 (47.97%), Postives = 104/148 (70.27%), Query Frame = 1


Query: 1   MALSILKGLLQDYVQSLIEERIVNERFSQIL---TKFEEPDCVQLINIYLRDVESILSEL 60
           MALSI+KGLL+ YVQSL  E I+NE+FS I            VQLIN Y  DVESIL++L
Sbjct: 1   MALSIVKGLLEQYVQSLFNEGIINEQFSHIQHLKMVGRTEHFVQLINTYCLDVESILAQL 60

Query: 61  SITVDSLDLDFSKLSLLANKIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMK 120
           + ++D  ++DFSKL+ LA ++ ++S+RIGA+H++LA   L++AC++  ++      +W K
Sbjct: 61  ASSIDLPEVDFSKLAALAAEVTERSSRIGAEHVRLACVDLMQACEQMQKQKFLLALDWTK 120

Query: 121 HEFTITQNKFQPVIQMEQRILRVMSKPK 146
            EFT TQNK Q ++QME+RI+R+ +K K
Sbjct: 121 TEFTQTQNKLQVLVQMERRIMRLEAKQK 148

[Close]

BLAST of CSPI06G12450.1 vs. TrEMBL
Match: K7M321_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G317900 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-25
Identity = 70/143 (48.95%), Postives = 102/143 (71.33%), Query Frame = 1


Query: 1   MALSILKGLLQDYVQSLIEERIVNERFSQI--LTKFEEPD-CVQLINIYLRDVESILSEL 60
           M +SILKGLLQ Y++SL +E +VN++F+ I  L +  EPD  VQLI  Y  +VE IL EL
Sbjct: 1   MTMSILKGLLQGYMKSLFDEGVVNDQFNMIVALKRIGEPDRVVQLIETYFSNVERILFEL 60

Query: 61  SITVDSLDLDFSKLSLLANKIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMK 120
           S  VD+  + F KL+ LA +IE KST IGA+ MKLA + +I+AC+++ Q+  S+  +W+K
Sbjct: 61  SRHVDNPKVSFCKLASLAREIEDKSTSIGAEQMKLACSDVIKACNEKHQENFSRSMSWLK 120

Query: 121 HEFTITQNKFQPVIQMEQRILRV 141
            EF+ T+NK +  +QME+RI+R+
Sbjct: 121 IEFSKTKNKLEAFVQMERRIIRL 143

[Close]

BLAST of CSPI06G12450.1 vs. TrEMBL
Match: A0A0B2QIZ1_GLYSO (Histidine-containing phosphotransfer protein 1 OS=Glycine soja GN=glysoja_021021 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.4e-25
Identity = 69/143 (48.25%), Postives = 102/143 (71.33%), Query Frame = 1


Query: 1   MALSILKGLLQDYVQSLIEERIVNERFSQI--LTKFEEPD-CVQLINIYLRDVESILSEL 60
           M +SILKGLLQ Y++SL +E +VN++F+ I  L +  EPD  VQLI  Y  +VE IL EL
Sbjct: 1   MTMSILKGLLQGYMKSLFDEGVVNDQFNMIVALKRIGEPDRVVQLIETYFSNVERILFEL 60

Query: 61  SITVDSLDLDFSKLSLLANKIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMK 120
           S  VD+  + F KL+ LA +IE KST IGA+ MKLA + +I+AC+++ Q+  S+  +W+K
Sbjct: 61  SRHVDNPKVSFCKLASLAREIEDKSTSIGAEQMKLACSDVIKACNEKHQENFSRSMSWLK 120

Query: 121 HEFTITQNKFQPVIQMEQRILRV 141
            EF+ T+NK +  +QME++I+R+
Sbjct: 121 IEFSKTKNKLEAFVQMERKIIRL 143

[Close]

BLAST of CSPI06G12450.1 vs. TAIR10
Match: AT3G21510.1 (AT3G21510.1 histidine-containing phosphotransmitter 1)

HSP 1 Score: 66.2 bits (160), Expect = 1.9e-11
Identity = 38/132 (28.79%), Postives = 80/132 (60.61%), Query Frame = 1


Query: 10  LQDYVQSLIEERIVNERFSQILTKFEE--PDCV-QLINIYLRDVESILSELSITVDSLDL 69
           LQDY +SL  E I++ +F Q+    +E  PD V Q++ ++ +D + IL++LS+++D   +
Sbjct: 10  LQDYTKSLFLEGILDSQFLQLQQLQDESNPDFVSQVVTLFFQDSDRILNDLSLSLDQQVV 69

Query: 70  DFSKLSLLANKIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMKHEFTITQNK 129
           DF K+    ++++  S+ IGAQ +K A       C++++ +   +    +K E+ + +N+
Sbjct: 70  DFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVKQEYYLVKNR 129

Query: 130 FQPVIQMEQRIL 139
            + + ++EQ+I+
Sbjct: 130 LETLFKLEQQIV 141

[Close]

BLAST of CSPI06G12450.1 vs. NCBI nr
Match: gi|778722151|ref|XP_011658416.1| (PREDICTED: uncharacterized protein LOC101216578 [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 4.0e-72
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 1   MALSILKGLLQDYVQSLIEERIVNERFSQILTKFEEPDCVQLINIYLRDVESILSELSIT 60
           MALSILKGLLQDYVQSLIEERIVNERFSQILTKFEEPDCVQLINIYLRDVESILSELSIT
Sbjct: 1   MALSILKGLLQDYVQSLIEERIVNERFSQILTKFEEPDCVQLINIYLRDVESILSELSIT 60

Query: 61  VDSLDLDFSKLSLLANKIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMKHEF 120
           VDSLDLDFSKLSLLA+KIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMKHEF
Sbjct: 61  VDSLDLDFSKLSLLADKIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMKHEF 120

Query: 121 TITQNKFQPVIQMEQRILRVMSKPKYT 148
           TITQNKFQPVIQMEQRILRVMSKPKYT
Sbjct: 121 TITQNKFQPVIQMEQRILRVMSKPKYT 147

[Close]

BLAST of CSPI06G12450.1 vs. NCBI nr
Match: gi|566188041|ref|XP_006379316.1| (hypothetical protein POPTR_0009s14820g [Populus trichocarpa])

HSP 1 Score: 132.9 bits (333), Expect = 4.7e-28
Identity = 75/148 (50.68%), Postives = 105/148 (70.95%), Query Frame = 1


Query: 1   MALSILKGLLQDYVQSLIEERIVNERFSQILT--KFEEPD-CVQLINIYLRDVESILSEL 60
           MA+ I+KGLLQ YVQSL +E IVN +F  I T    EEPD  VQLIN Y  DVESIL EL
Sbjct: 1   MAMLIVKGLLQQYVQSLFDEGIVNAQFCHIQTLKTEEEPDHVVQLINTYCIDVESILFEL 60

Query: 61  SITVDSLDLDFSKLSLLANKIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMK 120
              +D  D+DFSKL+ LA ++E++S+ +GA+HM+LA   L++AC + D++ +S   NW+K
Sbjct: 61  GSYIDLPDVDFSKLAALAQQVEERSSLMGAEHMRLACADLVQACRQMDKRNLSLSLNWIK 120

Query: 121 HEFTITQNKFQPVIQMEQRILRVMSKPK 146
           +EF   + K + V+QME++I+R+ SK K
Sbjct: 121 NEFAHIRTKLEVVVQMERKIMRLESKHK 148

[Close]

BLAST of CSPI06G12450.1 vs. NCBI nr
Match: gi|823227936|ref|XP_012446743.1| (PREDICTED: histidine-containing phosphotransfer protein 1-like [Gossypium raimondii])

HSP 1 Score: 127.5 bits (319), Expect = 2.0e-26
Identity = 71/148 (47.97%), Postives = 104/148 (70.27%), Query Frame = 1


Query: 1   MALSILKGLLQDYVQSLIEERIVNERFSQIL---TKFEEPDCVQLINIYLRDVESILSEL 60
           MALSI+KGLL+ YVQSL  E I+NE+FS I            VQLIN Y  DVESIL++L
Sbjct: 1   MALSIVKGLLEQYVQSLFNEGIINEQFSHIQHLKMVGRTEHFVQLINTYCLDVESILAQL 60

Query: 61  SITVDSLDLDFSKLSLLANKIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMK 120
           + ++D  ++DFSKL+ LA ++ ++S+RIGA+H++LA   L++AC++  ++      +W K
Sbjct: 61  ASSIDLPEVDFSKLAALAAEVTERSSRIGAEHVRLACVDLMQACEQMQKQKFLLALDWTK 120

Query: 121 HEFTITQNKFQPVIQMEQRILRVMSKPK 146
            EFT TQNK Q ++QME+RI+R+ +K K
Sbjct: 121 TEFTQTQNKLQVLVQMERRIMRLEAKQK 148

[Close]

BLAST of CSPI06G12450.1 vs. NCBI nr
Match: gi|1000946726|ref|XP_015580808.1| (PREDICTED: uncharacterized protein LOC107262049 [Ricinus communis])

HSP 1 Score: 125.9 bits (315), Expect = 5.7e-26
Identity = 72/146 (49.32%), Postives = 101/146 (69.18%), Query Frame = 1


Query: 1   MALSILKGLLQDYVQSLIEERIVNERFSQILT--KFEEPDCV-QLINIYLRDVESILSEL 60
           MAL I+KGLLQ YVQSL +E IVN++F  I T    EEPD V QLIN Y  DVE+IL EL
Sbjct: 1   MALPIVKGLLQQYVQSLFDEGIVNDQFLNIQTLKTVEEPDRVMQLINTYCIDVEAILLEL 60

Query: 61  SITVDSLDLDFSKLSLLANKIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMK 120
           +  +D  +++FS +  LA +IE+KS  +GA HM+L+   LI+AC    ++ +S++ +WMK
Sbjct: 61  TSYMDLPEVNFSNMEALARQIEEKSLYVGAGHMRLSCVGLIQACRDMQKRSISRELDWMK 120

Query: 121 HEFTITQNKFQPVIQMEQRILRVMSK 144
           +EF  T+NK Q  +Q E++ILR+  K
Sbjct: 121 NEFACTRNKLQVFVQTERKILRLERK 146

[Close]

BLAST of CSPI06G12450.1 vs. NCBI nr
Match: gi|571502328|ref|XP_006594941.1| (PREDICTED: uncharacterized protein LOC102663041 [Glycine max])

HSP 1 Score: 123.6 bits (309), Expect = 2.8e-25
Identity = 70/143 (48.95%), Postives = 102/143 (71.33%), Query Frame = 1


Query: 1   MALSILKGLLQDYVQSLIEERIVNERFSQI--LTKFEEPD-CVQLINIYLRDVESILSEL 60
           M +SILKGLLQ Y++SL +E +VN++F+ I  L +  EPD  VQLI  Y  +VE IL EL
Sbjct: 1   MTMSILKGLLQGYMKSLFDEGVVNDQFNMIVALKRIGEPDRVVQLIETYFSNVERILFEL 60

Query: 61  SITVDSLDLDFSKLSLLANKIEKKSTRIGAQHMKLAATRLIEACDKEDQKIVSQDFNWMK 120
           S  VD+  + F KL+ LA +IE KST IGA+ MKLA + +I+AC+++ Q+  S+  +W+K
Sbjct: 61  SRHVDNPKVSFCKLASLAREIEDKSTSIGAEQMKLACSDVIKACNEKHQENFSRSMSWLK 120

Query: 121 HEFTITQNKFQPVIQMEQRILRV 141
            EF+ T+NK +  +QME+RI+R+
Sbjct: 121 IEFSKTKNKLEAFVQMERRIIRL 143

The following BLAST results are available for this feature:

BLAST of CSPI06G12450.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AHP1_ARATH	3.3e-10	28.79	Histidine-containing phosphotransfer protein 1 OS=Arabidopsis thaliana GN=AHP1 P...	[more]

BLAST of CSPI06G12450.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB37_CUCSA	2.8e-72	99.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G151770 PE=4 SV=1	[more]
U5G0X4_POPTR	3.2e-28	50.68	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s14820g PE=4 SV=1	[more]
A0A0D2UD88_GOSRA	1.4e-26	47.97	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G087000 PE=4 SV=1	[more]
K7M321_SOYBN	2.0e-25	48.95	Uncharacterized protein OS=Glycine max GN=GLYMA_13G317900 PE=4 SV=1	[more]
A0A0B2QIZ1_GLYSO	4.4e-25	48.25	Histidine-containing phosphotransfer protein 1 OS=Glycine soja GN=glysoja_021021...	[more]

BLAST of CSPI06G12450.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G21510.1	1.9e-11	28.79	histidine-containing phosphotransmitter 1	[more]

BLAST of CSPI06G12450.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722151\|ref\|XP_011658416.1\|	4.0e-72	99.32	PREDICTED: uncharacterized protein LOC101216578 [Cucumis sativus]	[more]
gi\|566188041\|ref\|XP_006379316.1\|	4.7e-28	50.68	hypothetical protein POPTR_0009s14820g [Populus trichocarpa]	[more]
gi\|823227936\|ref\|XP_012446743.1\|	2.0e-26	47.97	PREDICTED: histidine-containing phosphotransfer protein 1-like [Gossypium raimon...	[more]
gi\|1000946726\|ref\|XP_015580808.1\|	5.7e-26	49.32	PREDICTED: uncharacterized protein LOC107262049 [Ricinus communis]	[more]
gi\|571502328\|ref\|XP_006594941.1\|	2.8e-25	48.95	PREDICTED: uncharacterized protein LOC102663041 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008207	Sig_transdc_His_kin_Hpt_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0000160	phosphorelay signal transduction system

Vocabulary: **Molecular Function**
Term	Definition
GO:0004871	signal transducer activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
cellular_component	GO:0005622	intracellular
molecular_function	GO:0004871	signal transducer activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI06G12450	CSPI06G12450	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI06G12450.1	CSPI06G12450.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G12450.1.cds1	CSPI06G12450.1.cds1	CDS
CSPI06G12450.1.cds2	CSPI06G12450.1.cds2	CDS
CSPI06G12450.1.cds3	CSPI06G12450.1.cds3	CDS
CSPI06G12450.1.cds4	CSPI06G12450.1.cds4	CDS
CSPI06G12450.1.cds5	CSPI06G12450.1.cds5	CDS
CSPI06G12450.1.cds6	CSPI06G12450.1.cds6	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008207	Signal transduction histidine kinase, phosphotransfer (Hpt) domain	unknown	SSF47226	Histidine-containing phosphotransfer domain, HPT domain	coord: 11..135 score: 1.85
None	No IPR available	PANTHER	PTHR28242	FAMILY NOT NAMED	coord: 1..140 score: 2.2
None	No IPR available	PANTHER	PTHR28242:SF7	SUBFAMILY NOT NAMED	coord: 1..140 score: 2.2