CSPI06G07120.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G07120.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	ROP-interactive CRIB motif-containing protein 6, putative
Location	Chr6 : 6114387 .. 6115282 (-)
Sequence length	579

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATTGGGCATCCAACAGATGTTAAACATGTTGCTCATATTGGTTGGGATGGTCCTTCTGTCAATTCTCCAAGCTGGGTAAGATTTCGAAAATCAATATTGATTTAGTTTTTAACCATATGCATATATAATCAAAATTTGTTCTCAATCTTATATTGTATTGTTTGTCATATAAAACGGGTCACTAATTTTGTAGATGAATGAATTTAAAGCGCCACCATCGTTTTCATCTGCTCCGTTGAGTCTGCATGCCTCTGGAGACAACAAAGAGGATGTTTCTGTTAAATGGGTATCAGAAGGTTTGCTTACTTACTTGTCTGACTCCTCATCAACTTTATTTAAATTTTGTTTAATAAGTCTTTTGACACAATTTTATTTTTTAAAACCAAAAACACATATTGTTCGTCGCATGTTGGTTTAATTTTTTTCAAAATTGAAATTTTGCATTGCACGTAAAAAAATTCTAGAAATTGACACCTTATGAGTTTGTGTGTGTAGATCGTCCTAGCAGAAGAGTAGCGAAGGGTTCAAGTTCATCAGCAAAAAATTTAACGGCGGACGTAACAAAAACATCAAAACACCCTTCTTCTTCCTCCACCACCTCCTCCTCAACGGAGTCCCCCACATGCAGAGAAAGGTCATCGGAAAGACAGAAAACGAGACGATCTTCAAAGTCCAAGGAACCATCGTCGTCGGACAACAACAACAACAACCACTCCCCCACCTTAAGCCTACCGGACGTCCCAAGACAAACCCGTCGCAAGAAAACAACCCGAACCAAACCCCACCTGGCTCCAGAAACTTACAAGTCCCCTCATTCCGACCCTGGCTCCACCACCGCTACCGGCTCCATTTCTTTATCCAAAGACAGCGATCTATGTCAGACCCCTTAA

mRNA sequence

ATGAAAATTGGGCATCCAACAGATGTTAAACATGTTGCTCATATTGGTTGGGATGGTCCTTCTGTCAATTCTCCAAGCTGGATGAATGAATTTAAAGCGCCACCATCGTTTTCATCTGCTCCGTTGAGTCTGCATGCCTCTGGAGACAACAAAGAGGATGTTTCTGTTAAATGGGTATCAGAAGATCGTCCTAGCAGAAGAGTAGCGAAGGGTTCAAGTTCATCAGCAAAAAATTTAACGGCGGACGTAACAAAAACATCAAAACACCCTTCTTCTTCCTCCACCACCTCCTCCTCAACGGAGTCCCCCACATGCAGAGAAAGGTCATCGGAAAGACAGAAAACGAGACGATCTTCAAAGTCCAAGGAACCATCGTCGTCGGACAACAACAACAACAACCACTCCCCCACCTTAAGCCTACCGGACGTCCCAAGACAAACCCGTCGCAAGAAAACAACCCGAACCAAACCCCACCTGGCTCCAGAAACTTACAAGTCCCCTCATTCCGACCCTGGCTCCACCACCGCTACCGGCTCCATTTCTTTATCCAAAGACAGCGATCTATGTCAGACCCCTTAA

Coding sequence (CDS)

ATGAAAATTGGGCATCCAACAGATGTTAAACATGTTGCTCATATTGGTTGGGATGGTCCTTCTGTCAATTCTCCAAGCTGGATGAATGAATTTAAAGCGCCACCATCGTTTTCATCTGCTCCGTTGAGTCTGCATGCCTCTGGAGACAACAAAGAGGATGTTTCTGTTAAATGGGTATCAGAAGATCGTCCTAGCAGAAGAGTAGCGAAGGGTTCAAGTTCATCAGCAAAAAATTTAACGGCGGACGTAACAAAAACATCAAAACACCCTTCTTCTTCCTCCACCACCTCCTCCTCAACGGAGTCCCCCACATGCAGAGAAAGGTCATCGGAAAGACAGAAAACGAGACGATCTTCAAAGTCCAAGGAACCATCGTCGTCGGACAACAACAACAACAACCACTCCCCCACCTTAAGCCTACCGGACGTCCCAAGACAAACCCGTCGCAAGAAAACAACCCGAACCAAACCCCACCTGGCTCCAGAAACTTACAAGTCCCCTCATTCCGACCCTGGCTCCACCACCGCTACCGGCTCCATTTCTTTATCCAAAGACAGCGATCTATGTCAGACCCCTTAA

Homology

[Close]

BLAST of CSPI06G07120.1 vs. Swiss-Prot
Match: RIC6_ARATH (CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana GN=RIC6 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.6e-10
Identity = 60/159 (37.74%), Postives = 85/159 (53.46%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVN--SPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKW 60
           ++IG+PTDVKHVAHIGWDGPS N  +PSWM EF +   F S      A G  ++D S+K 
Sbjct: 32  IQIGNPTDVKHVAHIGWDGPSANATAPSWMTEFNSGGGFES------AEGVGEDDSSIKC 91

Query: 61  VSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRS 120
           +SE         G S    NL          P S+   +S   SPT +++SS++ K R S
Sbjct: 92  MSE-------YGGRSRDLPNL----------PKSTRKAASEKGSPT-KDKSSDKTKRRSS 151

Query: 121 SKSKEPSS------SDNNNNNHSPTLSLPDVPRQTRRKK 152
           +K    SS      ++  +   S    LP++P+++RRKK
Sbjct: 152 NKGTSSSSRRPKEATEEQDELSSWPSGLPEIPKKSRRKK 166

[Close]

BLAST of CSPI06G07120.1 vs. Swiss-Prot
Match: RIC7_ARATH (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-10
Identity = 55/154 (35.71%), Postives = 84/154 (54.55%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVN--SPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKW 60
           M+IG+PTDVKHVAHIGWDGPS N  +PSWMN+FK+ P   S        G  ++D SVK 
Sbjct: 34  MQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSPVMES------IQGLGEDDSSVKC 93

Query: 61  VSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRS 120
            SE     R       S +  +++    +K  S  +   +S +  +    SS R K   S
Sbjct: 94  QSEFGGRTRDLPKLPKSTRKSSSEKGSPTKERSDKTKRRTSNKGTS----SSRRTKDEDS 153

Query: 121 SKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKT 153
           + S   ++ D +++    +  LP+VP++++RKK+
Sbjct: 154 TSSSRRTTKDEDSSLSQHSAGLPEVPKKSKRKKS 177

[Close]

BLAST of CSPI06G07120.1 vs. Swiss-Prot
Match: RIC9_ARATH (CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana GN=RIC9 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.7e-07
Identity = 34/97 (35.05%), Postives = 51/97 (52.58%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60
           M+IG+PTDV+HV+HIGWD  S ++PSW++EFK              + +N  + +  W  
Sbjct: 28  MEIGYPTDVRHVSHIGWDSSSSSAPSWLHEFK--------------TSNNVLEPNSSWPF 87

Query: 61  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTS 98
           +D  S   A G   S+K +  + TK +     SS  S
Sbjct: 88  QDLKSAMEAFGEVESSKEMERESTKQNLKKKLSSKAS 110

[Close]

BLAST of CSPI06G07120.1 vs. TrEMBL
Match: A0A0A0KF43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088140 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.9e-97
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60
           MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS
Sbjct: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60

Query: 61  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK 120
           EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK
Sbjct: 61  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK 120

Query: 121 SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI 180
           SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI
Sbjct: 121 SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI 180

Query: 181 SLSKDSDLCQTP 193
           SLSKDSDLCQTP
Sbjct: 181 SLSKDSDLCQTP 192

[Close]

BLAST of CSPI06G07120.1 vs. TrEMBL
Match: B9SV18_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0259080 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.8e-23
Identity = 90/200 (45.00%), Postives = 123/200 (61.50%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPP-SFSSAPLSLHASGDNKEDVSVKWV 60
           M+IG+PTDVKHVAHIGWDGPSV SPSWMNEFKAP   FSSAP  L+++G+ KED S+ WV
Sbjct: 49  MQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAP--LNSNGEPKEDNSITWV 108

Query: 61  SEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSS 120
           SED  SRR ++  S        ++ K S+ P  SST     ESPT RE++ + +++R+SS
Sbjct: 109 SEDSSSRRGSR--SRGIDRDLPELPKASRKP--SSTERLDGESPT-REKTDKPKQSRKSS 168

Query: 121 KSKEPSSSDNNNNNHSPTLS--------LPDVPRQTRRKKTTRTKPHLAPETYKSPHSDP 180
           ++     +D  +  HS   S        LPD+P++TRRKK+       A    K+   D 
Sbjct: 169 RNATKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRA-KAQALDA 228

Query: 181 GSTTATGSISLSKDSDLCQT 192
              + +GSIS S + +LC+T
Sbjct: 229 DCGSDSGSISNSLNGELCET 240

[Close]

BLAST of CSPI06G07120.1 vs. TrEMBL
Match: U5GNR4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s03680g PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.0e-22
Identity = 89/205 (43.41%), Postives = 121/205 (59.02%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60
           M+IG+PTDVKHVAHIGWDGPS+NSPSWM EFK+PP FSSAPLSL    D+KE+ SVKWVS
Sbjct: 29  MQIGYPTDVKHVAHIGWDGPSINSPSWMTEFKSPPEFSSAPLSL--DQDSKEEGSVKWVS 88

Query: 61  E--DRPSRRV------AKGSSSSAKNLTA-DVTKTSKHPSSSSTTSSSTESPTCRERSSE 120
           E   R   R       A GS   ++N  A D+ +  K     S+T +S ESP+ +E+S +
Sbjct: 89  EGSSRKGSRAPNSPPGAPGSPVGSQNSPARDLPELPKSSRRRSSTGTSAESPS-KEKSDK 148

Query: 121 RQKTRRSSK--SKEPSSSDNNNNNH-------SPTLSLPDVPRQTRRKKTTRTKPHLAPE 180
            +++RRSS+  +K+       + NH        P   LP++P++TRRKK+       +  
Sbjct: 149 PKQSRRSSRNGTKDLLDGSKTSRNHKDPSVENKPPSDLPEIPKKTRRKKSKDASVGESSS 208

Query: 181 TYKSPHSDPGSTTATGSISLSKDSD 188
             +S    P S    GS  +SK S+
Sbjct: 209 RSRSRSKVPASEGDEGSEMISKSSN 230

[Close]

BLAST of CSPI06G07120.1 vs. TrEMBL
Match: M5W154_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023388mg PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.5e-22
Identity = 83/194 (42.78%), Postives = 118/194 (60.82%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPS--VNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKW 60
           M+IG PTDVKHVAHIGW+GPS    SPSWMNEF+APP +SS PLS   +G+ KED  VKW
Sbjct: 23  MQIGFPTDVKHVAHIGWEGPSTAAGSPSWMNEFQAPPGYSSGPLS---NGETKEDPGVKW 82

Query: 61  VSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRS 120
           VS+D   +  ++G+ S A + T D+ + S   +SS       +SP  RERS + ++TRRS
Sbjct: 83  VSQDSSRKGSSRGARSPAHD-TPDLPRASPQQTSSGHGDGGIDSPK-RERSDKPKQTRRS 142

Query: 121 SKSKEPSSS---------DNNNNNHSPTLSLPDVPRQTRRKK---------TTRTKPHLA 175
           SK+++ + S         ++ + + SP  + PD+P++TRRKK         + + KPH +
Sbjct: 143 SKNRDTTDSITRGIRQSMESIHGSESPQ-NPPDIPKKTRRKKSKDSSVGGASRKAKPHAS 202

[Close]

BLAST of CSPI06G07120.1 vs. TrEMBL
Match: A0A0A0L7D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G374200 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.2e-20
Identity = 91/204 (44.61%), Postives = 114/204 (55.88%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60
           M+IG PTDVKHVAHIGWDGPSVNSPSWMNEFK P            +GD K+D S + VS
Sbjct: 28  MQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKHP-----------NNGDIKQDASAQCVS 87

Query: 61  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK 120
           +D      +K   +       ++ K+SK   SS+   S  ESPT R++ SE+ K+++SSK
Sbjct: 88  QD------SKRDMAVTSRDMPELPKSSKR-QSSTVGGSVAESPTMRDK-SEKVKSKKSSK 147

Query: 121 SKEPSSSDN----------NNNNHSPTLSLPDVPRQTRRKK------TTRTKPHLAPETY 180
           ++E SSSDN          N  + SPT SLP VP++ RRKK      T       A ET 
Sbjct: 148 ARESSSSDNIGPSRRNSDLNQGSESPTESLPGVPKKGRRKKSKEEGSTKSRSKATAAETC 207

Query: 181 KSPHSDPGSTTATGSISLSKDSDL 189
            S  S+  S    GSIS S D DL
Sbjct: 208 SSQFSNNASD--VGSISRSNDDDL 210

[Close]

BLAST of CSPI06G07120.1 vs. TAIR10
Match: AT2G20430.1 (AT2G20430.1 ROP-interactive CRIB motif-containing protein 6)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11
Identity = 60/159 (37.74%), Postives = 85/159 (53.46%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVN--SPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKW 60
           ++IG+PTDVKHVAHIGWDGPS N  +PSWM EF +   F S      A G  ++D S+K 
Sbjct: 32  IQIGNPTDVKHVAHIGWDGPSANATAPSWMTEFNSGGGFES------AEGVGEDDSSIKC 91

Query: 61  VSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRS 120
           +SE         G S    NL          P S+   +S   SPT +++SS++ K R S
Sbjct: 92  MSE-------YGGRSRDLPNL----------PKSTRKAASEKGSPT-KDKSSDKTKRRSS 151

Query: 121 SKSKEPSS------SDNNNNNHSPTLSLPDVPRQTRRKK 152
           +K    SS      ++  +   S    LP++P+++RRKK
Sbjct: 152 NKGTSSSSRRPKEATEEQDELSSWPSGLPEIPKKSRRKK 166

[Close]

BLAST of CSPI06G07120.1 vs. TAIR10
Match: AT4G28556.1 (AT4G28556.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 55/154 (35.71%), Postives = 84/154 (54.55%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVN--SPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKW 60
           M+IG+PTDVKHVAHIGWDGPS N  +PSWMN+FK+ P   S        G  ++D SVK 
Sbjct: 34  MQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSPVMES------IQGLGEDDSSVKC 93

Query: 61  VSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRS 120
            SE     R       S +  +++    +K  S  +   +S +  +    SS R K   S
Sbjct: 94  QSEFGGRTRDLPKLPKSTRKSSSEKGSPTKERSDKTKRRTSNKGTS----SSRRTKDEDS 153

Query: 121 SKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKT 153
           + S   ++ D +++    +  LP+VP++++RKK+
Sbjct: 154 TSSSRRTTKDEDSSLSQHSAGLPEVPKKSKRKKS 177

[Close]

BLAST of CSPI06G07120.1 vs. TAIR10
Match: AT1G61795.1 (AT1G61795.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 55.5 bits (132), Expect = 4.3e-08
Identity = 34/97 (35.05%), Postives = 51/97 (52.58%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60
           M+IG+PTDV+HV+HIGWD  S ++PSW++EFK              + +N  + +  W  
Sbjct: 28  MEIGYPTDVRHVSHIGWDSSSSSAPSWLHEFK--------------TSNNVLEPNSSWPF 87

Query: 61  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTS 98
           +D  S   A G   S+K +  + TK +     SS  S
Sbjct: 88  QDLKSAMEAFGEVESSKEMERESTKQNLKKKLSSKAS 110

[Close]

BLAST of CSPI06G07120.1 vs. TAIR10
Match: AT3G23380.1 (AT3G23380.1 ROP-interactive CRIB motif-containing protein 5)

HSP 1 Score: 48.5 bits (114), Expect = 5.3e-06
Identity = 51/161 (31.68%), Postives = 71/161 (44.10%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60
           M+IG PTDVKHVAHIGW+GPS  +PSWM++FK                 ++     K  S
Sbjct: 27  MQIGIPTDVKHVAHIGWEGPSATTPSWMHDFKP---------------TDQTKTETKGTS 86

Query: 61  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPT---CRERSSERQKTRR 120
             +P      GSS              KH      TS+   SPT    R   S R   R 
Sbjct: 87  NKKP------GSSG------------EKHRKGRRKTSTGNNSPTESPSRVGGSVRPSKRN 146

Query: 121 SSKSKEPSSSDNNNNNHSPTLSLPD------VPRQTRRKKT 153
           + K +E ++   + +     L LP       VP+Q+++KK+
Sbjct: 147 TGKQREQNTGSGSESGSG--LELPQQTDQFVVPKQSKQKKS 152

[Close]

BLAST of CSPI06G07120.1 vs. NCBI nr
Match: gi|700191182|gb|KGN46386.1| (hypothetical protein Csa_6G088140 [Cucumis sativus])

HSP 1 Score: 363.2 bits (931), Expect = 2.8e-97
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60
           MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS
Sbjct: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60

Query: 61  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK 120
           EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK
Sbjct: 61  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK 120

Query: 121 SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI 180
           SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI
Sbjct: 121 SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI 180

Query: 181 SLSKDSDLCQTP 193
           SLSKDSDLCQTP
Sbjct: 181 SLSKDSDLCQTP 192

[Close]

BLAST of CSPI06G07120.1 vs. NCBI nr
Match: gi|659120438|ref|XP_008460194.1| (PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo])

HSP 1 Score: 302.0 bits (772), Expect = 7.6e-79
Identity = 176/197 (89.34%), Postives = 182/197 (92.39%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60
           M+IG+PTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSL A GDNKEDVSVK VS
Sbjct: 1   MQIGYPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLPAPGDNKEDVSVKGVS 60

Query: 61  EDRPSRRVAKG-SSSSAKNLTAD--VTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRR 120
           EDR SRRV KG SSSSAKNLTAD  VTKTSKHPSSSSTT SST+SPTCRERSSERQKTRR
Sbjct: 61  EDR-SRRVEKGRSSSSAKNLTADDVVTKTSKHPSSSSTTPSSTDSPTCRERSSERQKTRR 120

Query: 121 SSKSKEPSSSDNNNNNHSPTLSLPDVPRQT-RRKKTTRTKPHLAPETYKSPHSDPG-STT 180
           SSKSKE SSS +NNNNHSPTLSLPDVPRQ  RRKKTTRTKPHLAPETYKSP+SDPG STT
Sbjct: 121 SSKSKESSSSSDNNNNHSPTLSLPDVPRQNPRRKKTTRTKPHLAPETYKSPYSDPGASTT 180

Query: 181 ATGSISLSKDSDLCQTP 193
           AT SISLSKD+DLCQTP
Sbjct: 181 ATDSISLSKDTDLCQTP 196

[Close]

BLAST of CSPI06G07120.1 vs. NCBI nr
Match: gi|223530665|gb|EEF32538.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 117.5 bits (293), Expect = 2.6e-23
Identity = 90/200 (45.00%), Postives = 123/200 (61.50%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPP-SFSSAPLSLHASGDNKEDVSVKWV 60
           M+IG+PTDVKHVAHIGWDGPSV SPSWMNEFKAP   FSSAP  L+++G+ KED S+ WV
Sbjct: 49  MQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAP--LNSNGEPKEDNSITWV 108

Query: 61  SEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSS 120
           SED  SRR ++  S        ++ K S+ P  SST     ESPT RE++ + +++R+SS
Sbjct: 109 SEDSSSRRGSR--SRGIDRDLPELPKASRKP--SSTERLDGESPT-REKTDKPKQSRKSS 168

Query: 121 KSKEPSSSDNNNNNHSPTLS--------LPDVPRQTRRKKTTRTKPHLAPETYKSPHSDP 180
           ++     +D  +  HS   S        LPD+P++TRRKK+       A    K+   D 
Sbjct: 169 RNATKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRA-KAQALDA 228

Query: 181 GSTTATGSISLSKDSDLCQT 192
              + +GSIS S + +LC+T
Sbjct: 229 DCGSDSGSISNSLNGELCET 240

[Close]

BLAST of CSPI06G07120.1 vs. NCBI nr
Match: gi|1000945521|ref|XP_015581245.1| (PREDICTED: CRIB domain-containing protein RIC7 [Ricinus communis])

HSP 1 Score: 117.5 bits (293), Expect = 2.6e-23
Identity = 90/200 (45.00%), Postives = 123/200 (61.50%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPP-SFSSAPLSLHASGDNKEDVSVKWV 60
           M+IG+PTDVKHVAHIGWDGPSV SPSWMNEFKAP   FSSAP  L+++G+ KED S+ WV
Sbjct: 28  MQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAP--LNSNGEPKEDNSITWV 87

Query: 61  SEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSS 120
           SED  SRR ++  S        ++ K S+ P  SST     ESPT RE++ + +++R+SS
Sbjct: 88  SEDSSSRRGSR--SRGIDRDLPELPKASRKP--SSTERLDGESPT-REKTDKPKQSRKSS 147

Query: 121 KSKEPSSSDNNNNNHSPTLS--------LPDVPRQTRRKKTTRTKPHLAPETYKSPHSDP 180
           ++     +D  +  HS   S        LPD+P++TRRKK+       A    K+   D 
Sbjct: 148 RNATKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRA-KAQALDA 207

Query: 181 GSTTATGSISLSKDSDLCQT 192
              + +GSIS S + +LC+T
Sbjct: 208 DCGSDSGSISNSLNGELCET 219

[Close]

BLAST of CSPI06G07120.1 vs. NCBI nr
Match: gi|566156070|ref|XP_006386214.1| (hypothetical protein POPTR_0002s03680g [Populus trichocarpa])

HSP 1 Score: 114.0 bits (284), Expect = 2.9e-22
Identity = 89/205 (43.41%), Postives = 121/205 (59.02%), Query Frame = 1


Query: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60
           M+IG+PTDVKHVAHIGWDGPS+NSPSWM EFK+PP FSSAPLSL    D+KE+ SVKWVS
Sbjct: 29  MQIGYPTDVKHVAHIGWDGPSINSPSWMTEFKSPPEFSSAPLSL--DQDSKEEGSVKWVS 88

Query: 61  E--DRPSRRV------AKGSSSSAKNLTA-DVTKTSKHPSSSSTTSSSTESPTCRERSSE 120
           E   R   R       A GS   ++N  A D+ +  K     S+T +S ESP+ +E+S +
Sbjct: 89  EGSSRKGSRAPNSPPGAPGSPVGSQNSPARDLPELPKSSRRRSSTGTSAESPS-KEKSDK 148

Query: 121 RQKTRRSSK--SKEPSSSDNNNNNH-------SPTLSLPDVPRQTRRKKTTRTKPHLAPE 180
            +++RRSS+  +K+       + NH        P   LP++P++TRRKK+       +  
Sbjct: 149 PKQSRRSSRNGTKDLLDGSKTSRNHKDPSVENKPPSDLPEIPKKTRRKKSKDASVGESSS 208

Query: 181 TYKSPHSDPGSTTATGSISLSKDSD 188
             +S    P S    GS  +SK S+
Sbjct: 209 RSRSRSKVPASEGDEGSEMISKSSN 230

The following BLAST results are available for this feature:

BLAST of CSPI06G07120.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIC6_ARATH	2.6e-10	37.74	CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana GN=RIC6 PE=1 SV=1	[more]
RIC7_ARATH	3.3e-10	35.71	CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1	[more]
RIC9_ARATH	7.7e-07	35.05	CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana GN=RIC9 PE=1 SV=1	[more]

BLAST of CSPI06G07120.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF43_CUCSA	1.9e-97	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088140 PE=4 SV=1	[more]
B9SV18_RICCO	1.8e-23	45.00	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0259080 PE=4 SV=1	[more]
U5GNR4_POPTR	2.0e-22	43.41	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s03680g PE=4 SV=1	[more]
M5W154_PRUPE	3.5e-22	42.78	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023388mg PE=4 SV=1	[more]
A0A0A0L7D1_CUCSA	3.2e-20	44.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G374200 PE=4 SV=1	[more]

BLAST of CSPI06G07120.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20430.1	1.4e-11	37.74	ROP-interactive CRIB motif-containing protein 6	[more]
AT4G28556.1	1.9e-11	35.71	PAK-box/P21-Rho-binding family protein	[more]
AT1G61795.1	4.3e-08	35.05	PAK-box/P21-Rho-binding family protein	[more]
AT3G23380.1	5.3e-06	31.68	ROP-interactive CRIB motif-containing protein 5	[more]

BLAST of CSPI06G07120.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700191182\|gb\|KGN46386.1\|	2.8e-97	100.00	hypothetical protein Csa_6G088140 [Cucumis sativus]	[more]
gi\|659120438\|ref\|XP_008460194.1\|	7.6e-79	89.34	PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo]	[more]
gi\|223530665\|gb\|EEF32538.1\|	2.6e-23	45.00	conserved hypothetical protein [Ricinus communis]	[more]
gi\|1000945521\|ref\|XP_015581245.1\|	2.6e-23	45.00	PREDICTED: CRIB domain-containing protein RIC7 [Ricinus communis]	[more]
gi\|566156070\|ref\|XP_006386214.1\|	2.9e-22	43.41	hypothetical protein POPTR_0002s03680g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000095	CRIB_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI06G07120	CSPI06G07120	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI06G07120.1	CSPI06G07120.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G07120.1.cds3	CSPI06G07120.1.cds3	CDS
CSPI06G07120.1.cds2	CSPI06G07120.1.cds2	CDS
CSPI06G07120.1.cds1	CSPI06G07120.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	GENE3D	G3DSA:3.90.810.10		coord: 1..32 score: 2.
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 2..33 score: 5.
IPR000095	CRIB domain	SMART	SM00285	PBD_5	coord: 3..34 score: 4.
IPR000095	CRIB domain	PROFILE	PS50108	CRIB	coord: 3..16 score: 8
None	No IPR available	PANTHER	PTHR23177	MKIAA1688 PROTEIN	coord: 135..154 score: 5.9E-26coord: 1..70 score: 5.9