CSPI06G02500.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGATTTAGGGATGATATTAATAGTTGATGGTAAGCAGTAAATTCATCAAAAGATATGTTAGTAATAAGTAATAAATTTAGGTTGGTTGAAAGATATGTAGTTGTAATCTCAACCTCCTTCATCCAAAACTAACTAATTTACTCTCTAACAAGAACCCACTACTAACCTCCCCATCTTTGTCCGCCACCGCCACCACCAAATGCGGTGGCCGGCCTTCAAGATCGGCGGCCTTGGCCTCATCGCCATATCATATGTCTCCATCGACTACCTCTCCCACCTCTCGCCCACATGGCATTCCCGTCTCCAGCCAGCTCTCTGGTCTCTTCTTGCCCTTGCCGCCATCTTTCGTGTTCCCTTCTACAAGCACTGGTCCTCCGAGTTCCGTTCCGCCATTCCATTTCTCGCCTCCATGCTCTTTATGCTCACCGCTCTTCTCTTCGAAGCCCTCTCCGTTCGGGGGGGGCCCGGCCTTCAAGATCGGCGGCCTTGGCCTCATCGCCATATCATATGTCTCCATCGACTACCTCTCCCACCTCTCGCCCACATGGCATTCCCGTCTCCAGCCAGCTCTCTGGTCTCTTCTTGCCCTTGCCGCCATCTTTCGTGTTCCCTTCTACAAGCACTGGTCCTCCGAGTTCCGTTCCGCCATTCCATTTCTCGCCTCCATGCTCTTTATGCTCACCGCTCTTCTCTTCGAAGCCCTCTCCGTTCGATTCGTCACCGCTGTCCTTGGTCTCGACTGGCACAGGTAATGTAAGGATTTGGATCTCTCTCTTTTGTGATTCCTGTGTTTGTAGATTGAAAACTGAAGTGGGTTGCACCAATCTTTACTTTGATTTGGACTTCGGGGGAGAAGATTGATTTTTTATTTTTGAGCTGCATAAACCTCAAATTGATTCCTAATGGTATTAGATGGTTAAGTTTATGTGCGAGTCTGTGGATCTGCTTGCTTCAGTTAACACACCGATTTTGGAAATATTTTCATTTGGGGATGGATCTGATATTTTTGGTATGTGGAGCTTGAGTTTCCAGATTTGAACTTCACGAACCCGTTGACTGAAAAACATTAATTTTTTTAGAAGTTGAACAAAAAGGTATTTATACCCTGATTGTTTGTCTAATTATGAGATATAATAAATGACATACTAGTTCTTTGTAAAAGATTTGTGAGTTCAGTCCCAGTATGGTATTAAAGTTCTTTAGATTTTGTTTCTATCACCAATGGAAAGAGATCTTGGCTAATAATTTATTTTTGGTAACCCATATATTAACATTTTCTTTCACACACTGACAGAACCTAGTTTAGAAATTGCAGGGCATCAGTCAACTATTTTACTTATTTTCAATTTTTTTAAAATATGCCCTTTTCTTTTTATTTATCTTTTAAAAAGAATTGAAATGGTTGATCCAATTTCTATGCTTATTCAGAATACAAGCCATCATCCAATGAAATTTACGAGATGCAGTGAGTGTGGATGAAATTCGATGTCGGCTTTACTTGATAGTTATCGGATTTGAAGAGAACATCTGTTGATAGTTGATGCAGCCGTTATATTTTAAAACAAATCTACCAAGTCCTTAGTTGTTTTGAGGACTGAATCTGGCAAGCATCTAGCAAATCTATGGGATTTTTAGCAAGCATCTTATAGTACTTTCAATCTTCTGAACACAAAAAAATAAAAATGCATGTCTTTAGTAGTTTTGTTAATATCCAATTTTGGAATTTAAATCATACATTGATTTTCTGTTTTGGTATACAACCAATACAGTTTACAATTGAGAATGGAACTTTCAGAAAATCTATTTTTGGGCTCTTCTAGAACAGAATTATAATTCTTGTACGGGTCTACCACAGTGAGATATATGTTTCTTGTTCTGCATTTTATGCGAATCTATGTAATTTAGTAATAAAGTTGGTGCTGAAATATAAGTCCGCTTAAGTGACTAATTTTTTTCTTCTTTTATTATTCTAATAACTTGAAAGTTGCTATTTCTATTCAGAACCCACATTGTGAAACTGTTTTACTCATTAGCAGTATATGTAGTTTCATTTCCCTGTTGGTTTTATTTTCATTTAAAATTCTAAGATTGTGGCTTTCTTGACATTTGACAGTGACGCAGCTCCTCTTCCTGATACTGGCCAATGGCTACTCTTGGCATTGAACGAGAAACTTCCTCCAGCTGTCGTGGAGATATTGAGAGCTCGGATTATTGGATTGCACCATTTTCTAATGTTGTTCATTATGTTGGCGTTCTCTGTGCTTTTTGACTCAGTTAAAGCTCCTGGACTTGGACTTGGTGCAAGGTATATGTTCACCATGGCAATCGGTCGACTTCTTAGAGCCATAACTTTTGTATCTACAATTCTACCATCTGCAAGGCCATGGTGTGCTTATTCTCGATTCAGAGTCCCTCCATACCCTCATCGTTGGGCACAGAAGTACTATGTTCCTTATGCTGAAGATGCTGATACAATTCGCCAGTTATTAAATCAGGACATAGCATTTGGTGAGTGACTTAAATTTTTCCATTTCCTTCATGCACATTTCCAAGACCCAAACGCCTAACACTTTTATCCTGACCCGAAAATACTTTCCACTGAAAACCATCATAGTTGAAACAAAGAGCAATTTGTTTTTGGATTTGAAAAGAGTTAAAAAGCACTCAAACTGCTTTGTAAGAAAATATTTGTAGTGCTTTTAGCCTTTTATACTTTTAGAAGTGTGGAACCAAACATTAAGATTAGATGATTTAATTTGTTATTGAGCAACCTTTTAAATTCCTTATTTGTATTGCTTTGTAGAATATAGTGTGCACATAATGACTGGAATTTTCTCTATTCTATGCGTTGTGCTTACACTTTTCTGAGTTGTTAACGCATAAAATTTGTTATTTTCCCAGCTGATCCCGGACAGATTCTTGGTGACTACAGACCTGATTGGGGTAAAATGAGCTTCTTATTAGATTTCCTTCGACCGACACCCTCTGAAGGATCTTCTTGGTACAATTTGCTTAAGAAGGCTGGAGGTGGCTGCAACGACCTTGTATACAGTGGCCACATGCTCGTTGCTGTCCTCACTGCCATGGCATGGACGGTATATACCCTATCGTGCAGTTTGCTTGATGTGATATAATGTTTTCTTTTTTGGCTAGCATAATTAAGTATCTTAATACCAGAAATATTGAAACAGGAGGCTTATGGAGGTCTTAGCTCAGCTGTTGTATGGTTTTTCGTAATACACAGTGCTCAGCGTGAAATACGAGAACGCCATCATTACTCTGTCGATTGTGTTGTTGCAATATACGTTGGGATTCTCTTGTGGAAAATGACTGGCTTCATTTGGTCAGCTAAAGATGTCGCGAGACGTCGAAAGCTAGTGAAGTTGGAGAAGATTCAAAATAAACTAGTACAAGCTGCAAAAGATGCAGATATTGACGAGGTGAGAGAACTTCTAAAGGAAATAGAGGTAACTAGTCAGGAGAGTGACAATGAAAGAAATCGAGGCCAGAGCGGAGTGTTGTGGTTCTTCGCTTGTGCAACAGTATTTGCTGCACTTGTTATTGTTCTTCTAGCCTTCACATGGACAAGTGATGGATAAATTTACTTGAAGCAATGACACGTTCCACGGGCTCACGAATACGGATTATCTTATGCAAAGTTTTGTAACGGTATCCGATTTCTCCCTCTGCCAAAGAAGGGAAAAAAACAAAAAAAGATCTTGTTTAGTTTATCGCTAGGATTTGTGGTGAATGTTGTTTTCTTGTAGAGTGTAATGAATGGTGATATGGTTTTAGATTGTGATGTTTGATAAGTTAATTAGAAACTGTGCTGTCTTGAAGTAGGTTTCTTGCAGTGTTCCATCCTTATCCTTGAAGAACAATTGTTTGCATATTAACCATTTGTGGGTTTTGTTTATTAGTTTAAACGAGTAGCCATAGGAATTAGTAATGGAGATCGAGTGCATTTTCATTGATTGATGGGAG ATGTCTCCATCGACTACCTCTCCCACCTCTCGCCCACATGGCATTCCCGTCTCCAGCCAGCTCTCTGGTCTCTTCTTGCCCTTGCCGCCATCTTTCGTGTTCCCTTCTACAAGCACTGGTCCTCCGAGTTCCGTTCCGCCATTCCATTTCTCGCCTCCATGCTCTTTATGCTCACCGCTCTTCTCTTCGAAGCCCTCTCCGTTCGGGGGGGGCCCGGCCTTCAAGATCGGCGGCCTTGGCCTCATCGCCATATCATATGTCTCCATCGACTACCTCTCCCACCTCTCGCCCACATGGCATTCCCGTCTCCAGCCAGCTCTCTGGTCTCTTCTTGCCCTTGCCGCCATCTTTCGTGTTCCCTTCTACAAGCACTGGTCCTCCGAGTTCCGTTCCGCCATTCCATTTCTCGCCTCCATGCTCTTTATGCTCACCGCTCTTCTCTTCGAAGCCCTCTCCGTTCGATTCGTCACCGCTGTCCTTGGTCTCGACTGGCACAGTGACGCAGCTCCTCTTCCTGATACTGGCCAATGGCTACTCTTGGCATTGAACGAGAAACTTCCTCCAGCTGTCGTGGAGATATTGAGAGCTCGGATTATTGGATTGCACCATTTTCTAATGTTGTTCATTATGTTGGCGTTCTCTGTGCTTTTTGACTCAGTTAAAGCTCCTGGACTTGGACTTGGTGCAAGGTATATGTTCACCATGGCAATCGGTCGACTTCTTAGAGCCATAACTTTTGTATCTACAATTCTACCATCTGCAAGGCCATGGTGTGCTTATTCTCGATTCAGAGTCCCTCCATACCCTCATCGTTGGGCACAGAAGTACTATGTTCCTTATGCTGAAGATGCTGATACAATTCGCCAGTTATTAAATCAGGACATAGCATTTGCTGATCCCGGACAGATTCTTGGTGACTACAGACCTGATTGGGGTAAAATGAGCTTCTTATTAGATTTCCTTCGACCGACACCCTCTGAAGGATCTTCTTGGTACAATTTGCTTAAGAAGGCTGGAGGTGGCTGCAACGACCTTGTATACAGTGGCCACATGCTCGTTGCTGTCCTCACTGCCATGGCATGGACGGAGGCTTATGGAGGTCTTAGCTCAGCTGTTGTATGGTTTTTCGTAATACACAGTGCTCAGCGTGAAATACGAGAACGCCATCATTACTCTGTCGATTGTGTTGTTGCAATATACGTTGGGATTCTCTTGTGGAAAATGACTGGCTTCATTTGGTCAGCTAAAGATGTCGCGAGACGTCGAAAGCTAGTGAAGTTGGAGAAGATTCAAAATAAACTAGTACAAGCTGCAAAAGATGCAGATATTGACGAGGTGAGAGAACTTCTAAAGGAAATAGAGGTAACTAGTCAGGAGAGTGACAATGAAAGAAATCGAGGCCAGAGCGGAGTGTTGTGGTTCTTCGCTTGTGCAACAGTATTTGCTGCACTTGTTATTGTTCTTCTAGCCTTCACATGGACAAGTGATGGATAA ATGTCTCCATCGACTACCTCTCCCACCTCTCGCCCACATGGCATTCCCGTCTCCAGCCAGCTCTCTGGTCTCTTCTTGCCCTTGCCGCCATCTTTCGTGTTCCCTTCTACAAGCACTGGTCCTCCGAGTTCCGTTCCGCCATTCCATTTCTCGCCTCCATGCTCTTTATGCTCACCGCTCTTCTCTTCGAAGCCCTCTCCGTTCGGGGGGGGCCCGGCCTTCAAGATCGGCGGCCTTGGCCTCATCGCCATATCATATGTCTCCATCGACTACCTCTCCCACCTCTCGCCCACATGGCATTCCCGTCTCCAGCCAGCTCTCTGGTCTCTTCTTGCCCTTGCCGCCATCTTTCGTGTTCCCTTCTACAAGCACTGGTCCTCCGAGTTCCGTTCCGCCATTCCATTTCTCGCCTCCATGCTCTTTATGCTCACCGCTCTTCTCTTCGAAGCCCTCTCCGTTCGATTCGTCACCGCTGTCCTTGGTCTCGACTGGCACAGTGACGCAGCTCCTCTTCCTGATACTGGCCAATGGCTACTCTTGGCATTGAACGAGAAACTTCCTCCAGCTGTCGTGGAGATATTGAGAGCTCGGATTATTGGATTGCACCATTTTCTAATGTTGTTCATTATGTTGGCGTTCTCTGTGCTTTTTGACTCAGTTAAAGCTCCTGGACTTGGACTTGGTGCAAGGTATATGTTCACCATGGCAATCGGTCGACTTCTTAGAGCCATAACTTTTGTATCTACAATTCTACCATCTGCAAGGCCATGGTGTGCTTATTCTCGATTCAGAGTCCCTCCATACCCTCATCGTTGGGCACAGAAGTACTATGTTCCTTATGCTGAAGATGCTGATACAATTCGCCAGTTATTAAATCAGGACATAGCATTTGCTGATCCCGGACAGATTCTTGGTGACTACAGACCTGATTGGGGTAAAATGAGCTTCTTATTAGATTTCCTTCGACCGACACCCTCTGAAGGATCTTCTTGGTACAATTTGCTTAAGAAGGCTGGAGGTGGCTGCAACGACCTTGTATACAGTGGCCACATGCTCGTTGCTGTCCTCACTGCCATGGCATGGACGGAGGCTTATGGAGGTCTTAGCTCAGCTGTTGTATGGTTTTTCGTAATACACAGTGCTCAGCGTGAAATACGAGAACGCCATCATTACTCTGTCGATTGTGTTGTTGCAATATACGTTGGGATTCTCTTGTGGAAAATGACTGGCTTCATTTGGTCAGCTAAAGATGTCGCGAGACGTCGAAAGCTAGTGAAGTTGGAGAAGATTCAAAATAAACTAGTACAAGCTGCAAAAGATGCAGATATTGACGAGGTGAGAGAACTTCTAAAGGAAATAGAGGTAACTAGTCAGGAGAGTGACAATGAAAGAAATCGAGGCCAGAGCGGAGTGTTGTGGTTCTTCGCTTGTGCAACAGTATTTGCTGCACTTGTTATTGTTCTTCTAGCCTTCACATGGACAAGTGATGGATAA
BLAST of CSPI06G02500.1 vs. TrEMBL
Match: A0A0A0K7Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016930 PE=4 SV=1) HSP 1 Score: 848.2 bits (2190), Expect = 5.1e-243 Identity = 423/426 (99.30%), Postives = 423/426 (99.30%), Query Frame = 1
BLAST of CSPI06G02500.1 vs. TrEMBL
Match: B9H7T1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s21540g PE=4 SV=2) HSP 1 Score: 713.0 bits (1839), Expect = 2.6e-202 Identity = 344/426 (80.75%), Postives = 385/426 (90.38%), Query Frame = 1
BLAST of CSPI06G02500.1 vs. TrEMBL
Match: A0A061FIN1_THECC (Sphingomyelin synthetase family protein isoform 1 OS=Theobroma cacao GN=TCM_035631 PE=4 SV=1) HSP 1 Score: 688.3 bits (1775), Expect = 6.7e-195 Identity = 334/426 (78.40%), Postives = 378/426 (88.73%), Query Frame = 1
BLAST of CSPI06G02500.1 vs. TrEMBL
Match: A0A059BYV2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04230 PE=4 SV=1) HSP 1 Score: 687.6 bits (1773), Expect = 1.1e-194 Identity = 330/421 (78.38%), Postives = 375/421 (89.07%), Query Frame = 1
BLAST of CSPI06G02500.1 vs. TrEMBL
Match: W9SAN4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017853 PE=4 SV=1) HSP 1 Score: 685.3 bits (1767), Expect = 5.7e-194 Identity = 330/429 (76.92%), Postives = 378/429 (88.11%), Query Frame = 1
BLAST of CSPI06G02500.1 vs. TAIR10
Match: AT1G43580.1 (AT1G43580.1 Sphingomyelin synthetase family protein) HSP 1 Score: 609.4 bits (1570), Expect = 2.0e-174 Identity = 304/422 (72.04%), Postives = 347/422 (82.23%), Query Frame = 1
BLAST of CSPI06G02500.1 vs. NCBI nr
Match: gi|449441209|ref|XP_004138375.1| (PREDICTED: uncharacterized protein LOC101212215 isoform X1 [Cucumis sativus]) HSP 1 Score: 848.2 bits (2190), Expect = 7.3e-243 Identity = 423/426 (99.30%), Postives = 423/426 (99.30%), Query Frame = 1
BLAST of CSPI06G02500.1 vs. NCBI nr
Match: gi|659126226|ref|XP_008463076.1| (PREDICTED: uncharacterized protein LOC103501312 [Cucumis melo]) HSP 1 Score: 836.3 bits (2159), Expect = 2.9e-239 Identity = 417/426 (97.89%), Postives = 420/426 (98.59%), Query Frame = 1
BLAST of CSPI06G02500.1 vs. NCBI nr
Match: gi|566172539|ref|XP_002306701.2| (hypothetical protein POPTR_0005s21540g [Populus trichocarpa]) HSP 1 Score: 713.0 bits (1839), Expect = 3.7e-202 Identity = 344/426 (80.75%), Postives = 385/426 (90.38%), Query Frame = 1
BLAST of CSPI06G02500.1 vs. NCBI nr
Match: gi|590600742|ref|XP_007019527.1| (Sphingomyelin synthetase family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 688.3 bits (1775), Expect = 9.7e-195 Identity = 334/426 (78.40%), Postives = 378/426 (88.73%), Query Frame = 1
BLAST of CSPI06G02500.1 vs. NCBI nr
Match: gi|702382414|ref|XP_010063857.1| (PREDICTED: uncharacterized protein LOC104450853 [Eucalyptus grandis]) HSP 1 Score: 687.6 bits (1773), Expect = 1.6e-194 Identity = 330/421 (78.38%), Postives = 375/421 (89.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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