CSPI05G26980.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G26980.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ubiquitin carboxyl-terminal hydrolase family protein
Location	Chr5 : 25678506 .. 25680613 (-)
Sequence length	1194

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGTCTAATGCAATTAAAACTGAAAGGAAGTGCTTCTCGTAGCGATGTTCCTGAACACAGCCGCCTCCAAAATCCTTCAAAAAGGCCGCCAAAAATCTCCGTTTGCTTTCATTCAGAAGTTCGGCTATGTCGATGTTTACATGAAGTGGAAGAAAGATTCATACTACGATTCCATTGAGCATATCACCAAATCCATTGAACTCAAATCCATTATCTCTCTCAAAAATTGCATCGCTCAAGACCCAAATGGGTGTATCCCAATTTCCGCCGTTTCAAAGCGAGGCCTCGAAATGGGCGTCTCGATGAAAGTTGCAAGGTTTCTTAGGCTTTACCCATCAATTTTTGAAGAGTTTACAGGTCCGGAATACAATCATCCCTGGTTCAGGTTAACACCAAAAGCAGTTGAGATTGATGCTGAAGAAAAAAAGACTTATCAAAACTGCAGGGAGGATTTGATTTGTAGGTTGAAGAAGTTCATATTGATGAGTAAAAACAACGTTCTGCCTTTGAAGATTATTCGAGGTATGCAATGGTATTTAGGGATTCCTGATGATCTTTTGCAAAAACCAGACGTTAATCTTGATGGGTCTTTTAAGTTAGTGAAGATGGAAGATGGGTTAGAGGGATTATCCGTGGAATTTGAGGAGAAACTCATGTCTGTCATACAGAAAAACGCCATTAAAAGAGGGGTTTATTCTGGTAGAACAATGGAGTCACTTGAATTCCCACTCTTCCCTTCAAAGGGTTTAAGGCTGAGGAGGAAGATTGAGGATTGGTTAAAGGAGTTTCAAAAGCTTCCTTATGTTTCTCCTTATGAAGAATTTTCCCATTTAGATCCAAATAGTGATATAGCAGAGAAAAGATTGGTGGGATTTATCCATGAAATGCTTAGTTTGTTTGTTGAGCATTCAGCAGAAAGGAAGAAGCTTCTATGTCTTAAAAAGTATATGGGTTTGCCTCAAAAATTCCATAAGGCATTTGAGAGACATCCTCACATGTTTTACTTGTCTCTGAAGAACAAAACTTGTACTGCCATTCTTAAGGAGGCTTACTGTGACAAGTCTTCTATTGAGAGACATCCCATATTGAGAATCAGACGAAAGTACATCCATCTGATGAAGGAATCTGCAGTGATTTTGAAGAATAGGAGGTTTAGTAATCATCTTGTTCATGGAGAAAACTCGGTGTTGGATTTTGATTTGGATACTGCTGATGGAAGAGAAATTCCCAAGTGTTAATGGTTGATTGCCTTTAGGTATTCCTTCTCTTTAATCCTTCACTTCCTTGGACAAGTTTACAGAATCAAAGTTCATTGTGCTTACTGCTTGTCTCTCTACTCTCTTGTGGCATTACTTTTAACCCTCTTCTACGTAAGTTCGATTCTTGAAATTTACCTTTGATTTCTACGTAGACTATTGTGACATGTTATGCAATTGAAACTTAACAAACTTCCATTCCTTTTTTTGGGAGATTTTGGGCTCTTGCACACCTTTGGGATTTTGAAAATTTTAGCACTTTTCCTTTGTTTTCATTGACACTTGGAGCACTTTTCTCTTTTATGCTTTGATTTTCTCATACATTTTTTACTTTGATTTTCACAACTGATAACCATACTGTCCGGATCTATGTACCTTCTGATCTCCCTATTTTGGCTTCTCTATTATTTTCATTGTATAATTTTCTAATAAAGAAGCTTGTCTCCTTTTTAAAAAAGGATTATCAAACTTACATTATTGTTCTTCAAGTTGTTTTGTTTGGGTTTTTTTCTCTTTTCCTGGCTATGCTGGACTTTCTTTCTTTGTTTCGTTGTTACTGCCCCTTGTTATTATATTTTATTTAAAGTGGAAAAAAAGATATTCATATTCTCCATTTCATTTTAACATGTAGATGATCCAGACTTCTTGTTTCAGTAAGAAGATCCATACAGTGGATTTTCGATCATCTAAGTTACAATTAAATCGAATACAACAGACAGGTGAAGCTGGAGCCTGGCGGTTAGACAAATGCTTAGTTTCTTGAAATTTCAAATGAGGTCAGTTCCCTAAGAATGCAGTTAACTATGTATTGTATGTAAATATTTTTCTGATAAGAGACCACACTTTAATTC

mRNA sequence

ATGTTCCTGAACACAGCCGCCTCCAAAATCCTTCAAAAAGGCCGCCAAAAATCTCCGTTTGCTTTCATTCAGAAGTTCGGCTATGTCGATGTTTACATGAAGTGGAAGAAAGATTCATACTACGATTCCATTGAGCATATCACCAAATCCATTGAACTCAAATCCATTATCTCTCTCAAAAATTGCATCGCTCAAGACCCAAATGGGTGTATCCCAATTTCCGCCGTTTCAAAGCGAGGCCTCGAAATGGGCGTCTCGATGAAAGTTGCAAGGTTTCTTAGGCTTTACCCATCAATTTTTGAAGAGTTTACAGGTCCGGAATACAATCATCCCTGGTTCAGGTTAACACCAAAAGCAGTTGAGATTGATGCTGAAGAAAAAAAGACTTATCAAAACTGCAGGGAGGATTTGATTTGTAGGTTGAAGAAGTTCATATTGATGAGTAAAAACAACGTTCTGCCTTTGAAGATTATTCGAGGTATGCAATGGTATTTAGGGATTCCTGATGATCTTTTGCAAAAACCAGACGTTAATCTTGATGGGTCTTTTAAGTTAGTGAAGATGGAAGATGGGTTAGAGGGATTATCCGTGGAATTTGAGGAGAAACTCATGTCTGTCATACAGAAAAACGCCATTAAAAGAGGGGTTTATTCTGGTAGAACAATGGAGTCACTTGAATTCCCACTCTTCCCTTCAAAGGGTTTAAGGCTGAGGAGGAAGATTGAGGATTGGTTAAAGGAGTTTCAAAAGCTTCCTTATGTTTCTCCTTATGAAGAATTTTCCCATTTAGATCCAAATAGTGATATAGCAGAGAAAAGATTGGTGGGATTTATCCATGAAATGCTTAGTTTGTTTGTTGAGCATTCAGCAGAAAGGAAGAAGCTTCTATGTCTTAAAAAGTATATGGGTTTGCCTCAAAAATTCCATAAGGCATTTGAGAGACATCCTCACATGTTTTACTTGTCTCTGAAGAACAAAACTTGTACTGCCATTCTTAAGGAGGCTTACTGTGACAAGTCTTCTATTGAGAGACATCCCATATTGAGAATCAGACGAAAGTACATCCATCTGATGAAGGAATCTGCAGTGATTTTGAAGAATAGGAGGTTTAGTAATCATCTTGTTCATGGAGAAAACTCGGTGTTGGATTTTGATTTGGATACTGCTGATGGAAGAGAAATTCCCAAGTGTTAA

Coding sequence (CDS)

ATGTTCCTGAACACAGCCGCCTCCAAAATCCTTCAAAAAGGCCGCCAAAAATCTCCGTTTGCTTTCATTCAGAAGTTCGGCTATGTCGATGTTTACATGAAGTGGAAGAAAGATTCATACTACGATTCCATTGAGCATATCACCAAATCCATTGAACTCAAATCCATTATCTCTCTCAAAAATTGCATCGCTCAAGACCCAAATGGGTGTATCCCAATTTCCGCCGTTTCAAAGCGAGGCCTCGAAATGGGCGTCTCGATGAAAGTTGCAAGGTTTCTTAGGCTTTACCCATCAATTTTTGAAGAGTTTACAGGTCCGGAATACAATCATCCCTGGTTCAGGTTAACACCAAAAGCAGTTGAGATTGATGCTGAAGAAAAAAAGACTTATCAAAACTGCAGGGAGGATTTGATTTGTAGGTTGAAGAAGTTCATATTGATGAGTAAAAACAACGTTCTGCCTTTGAAGATTATTCGAGGTATGCAATGGTATTTAGGGATTCCTGATGATCTTTTGCAAAAACCAGACGTTAATCTTGATGGGTCTTTTAAGTTAGTGAAGATGGAAGATGGGTTAGAGGGATTATCCGTGGAATTTGAGGAGAAACTCATGTCTGTCATACAGAAAAACGCCATTAAAAGAGGGGTTTATTCTGGTAGAACAATGGAGTCACTTGAATTCCCACTCTTCCCTTCAAAGGGTTTAAGGCTGAGGAGGAAGATTGAGGATTGGTTAAAGGAGTTTCAAAAGCTTCCTTATGTTTCTCCTTATGAAGAATTTTCCCATTTAGATCCAAATAGTGATATAGCAGAGAAAAGATTGGTGGGATTTATCCATGAAATGCTTAGTTTGTTTGTTGAGCATTCAGCAGAAAGGAAGAAGCTTCTATGTCTTAAAAAGTATATGGGTTTGCCTCAAAAATTCCATAAGGCATTTGAGAGACATCCTCACATGTTTTACTTGTCTCTGAAGAACAAAACTTGTACTGCCATTCTTAAGGAGGCTTACTGTGACAAGTCTTCTATTGAGAGACATCCCATATTGAGAATCAGACGAAAGTACATCCATCTGATGAAGGAATCTGCAGTGATTTTGAAGAATAGGAGGTTTAGTAATCATCTTGTTCATGGAGAAAACTCGGTGTTGGATTTTGATTTGGATACTGCTGATGGAAGAGAAATTCCCAAGTGTTAA

Homology

[Close]

BLAST of CSPI05G26980.1 vs. Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.6e-22
Identity = 91/339 (26.84%), Postives = 155/339 (45.72%), Query Frame = 1


Query: 37  KDSYYDSIEHITKSIELKSIISLKNCIAQDPNGCIPISAVSKRGLEMGVSMKV---ARFL 96
           +D  YD+   + K I  + ++   + I   PN  I IS +      +G+  K      FL
Sbjct: 48  RDHGYDNYMEVEKKI--RKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFL 107

Query: 97  RLYPSIFEEFTGPEYNHPWFRLTPKAVEIDAEEKKTYQNCREDLICRLKKFILMSKNNVL 156
             +P +FE +  P     + RLT KA++    E +   +   D + RL+K ++MS    +
Sbjct: 108 LKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGRI 167

Query: 157 PLKIIRGMQWYLGIPDDLLQKPDVNLDGSFKLVKMEDGLEGLSVEFEEK--LMSVIQKNA 216
            L+ +R  +   G+P+D      +     F+L+  E+  +   +E  EK   +S+     
Sbjct: 168 RLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKY-IEIVEKDPNLSICAIER 227

Query: 217 IKRGVY--SGRTMESLEFPL---FPSKGLRLRRKIEDWLKEFQKLPYVSPYEEFSHLDPN 276
           ++   Y   G   E + F     FP  G ++ +     + ++Q+LPY SPYE+ S  D  
Sbjct: 228 VREIEYRTKGIDAEDVRFSFVVNFPP-GFKIGKYFRIAVWKWQRLPYWSPYEDISGYDLR 287

Query: 277 SDIA----EKRLVGFIHEMLSLFVEHSAERKKLLCLKKYMGLPQKFHKAFERHPHMFYLS 336
           S  A    EKR V  IHE+LSL VE     +++   +  M LP+K  +   +H  +FY+S
Sbjct: 288 SMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYIS 347

Query: 337 LK---NKTCTAILKEAYCDKSSIERHPILRIRRKYIHLM 359
            +    K  T  L+E Y     +E + +   RR+   L+
Sbjct: 348 TRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELV 382

[Close]

BLAST of CSPI05G26980.1 vs. TrEMBL
Match: A0A0A0KTJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G622690 PE=4 SV=1)

HSP 1 Score: 803.1 bits (2073), Expect = 1.5e-229
Identity = 395/397 (99.50%), Postives = 395/397 (99.50%), Query Frame = 1


Query: 1   MFLNTAASKILQKGRQKSPFAFIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLK 60
           MFLNTAASKILQKGRQKSPFAFIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLK
Sbjct: 1   MFLNTAASKILQKGRQKSPFAFIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLK 60

Query: 61  NCIAQDPNGCIPISAVSKRGLEMGVSMKVARFLRLYPSIFEEFTGPEYNHPWFRLTPKAV 120
           NCIAQDPNGCIPISAVSKRGLEMGVSMKVARFLRLYPSIFEEFTGPEYNHPWFRLTPKAV
Sbjct: 61  NCIAQDPNGCIPISAVSKRGLEMGVSMKVARFLRLYPSIFEEFTGPEYNHPWFRLTPKAV 120

Query: 121 EIDAEEKKTYQNCREDLICRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLD 180
           EIDAEEKKTYQNCREDLICRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLD
Sbjct: 121 EIDAEEKKTYQNCREDLICRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLD 180

Query: 181 GSFKLVKMEDGLEGLSVEFEEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRRK 240
           GSFKLVKMEDGLEGLSVE EEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRRK
Sbjct: 181 GSFKLVKMEDGLEGLSVECEEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRRK 240

Query: 241 IEDWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLKK 300
           IEDWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHS ERKKLLCLKK
Sbjct: 241 IEDWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSTERKKLLCLKK 300

Query: 301 YMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKE 360
           YMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKE
Sbjct: 301 YMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKE 360

Query: 361 SAVILKNRRFSNHLVHGENSVLDFDLDTADGREIPKC 398
           SAVILKNRRFSNHLVHGENSVLDFDLDTADGREIPKC
Sbjct: 361 SAVILKNRRFSNHLVHGENSVLDFDLDTADGREIPKC 397

[Close]

BLAST of CSPI05G26980.1 vs. TrEMBL
Match: M5XN03_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017812mg PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 2.1e-159
Identity = 276/370 (74.59%), Postives = 318/370 (85.95%), Query Frame = 1


Query: 25  KFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLKNCIAQDPNGCIPISAVSKRGLEMG 84
           KF YVDVYMKWKKDSYYDSIE I KSI LK IISLKNCI+QDP GCIPIS VSKRG+++ 
Sbjct: 1   KFNYVDVYMKWKKDSYYDSIEQIHKSIMLKPIISLKNCISQDPGGCIPISDVSKRGIQLE 60

Query: 85  VSMKVARFLRLYPSIFEEFTGPEYNHPWFRLTPKAVEIDAEEKKTYQNCREDLICRLKKF 144
           V MKVARFLRLYPSIFEEFTGP+YN PWFRLTP+A EID EEK+ Y++CREDL  RLKKF
Sbjct: 61  VPMKVARFLRLYPSIFEEFTGPQYNLPWFRLTPEADEIDREEKRVYEDCREDLRDRLKKF 120

Query: 145 ILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLDGSFKLVKMEDGLEGLSVEFEEKLM 204
           ILMSK  VLPLKIIRGMQWYLG+PDD LQ PD NLD SF++V+MEDGL+GL+VE  EK++
Sbjct: 121 ILMSKEKVLPLKIIRGMQWYLGLPDDFLQHPDKNLDESFRIVEMEDGLKGLAVESGEKVL 180

Query: 205 SVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRRKIEDWLKEFQKLPYVSPYEEFSHLD 264
           S +Q+NA+K+GVY G  ME++EFPLFPSKGLRLRRKI DWLKEFQKLPYVSPYEEFSHLD
Sbjct: 181 STVQRNAMKKGVYVGGPMEAIEFPLFPSKGLRLRRKIVDWLKEFQKLPYVSPYEEFSHLD 240

Query: 265 PNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLKKYMGLPQKFHKAFERHPHMFYLSLK 324
           P+SDI+EKR+VG +HE+LSLFVEHSAERKKLLCLKK+MGLPQK HKAFERHP MFYLSL+
Sbjct: 241 PDSDISEKRVVGLLHELLSLFVEHSAERKKLLCLKKHMGLPQKVHKAFERHPSMFYLSLR 300

Query: 325 NKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKESAVILKNRRFSNHLVHGENSVLDF 384
           NKTCTAILKEAYCD+S+I+RHP+L +R KYI+LM+ESA I K RR ++          D 
Sbjct: 301 NKTCTAILKEAYCDESAIQRHPLLSVRNKYINLMRESATIFKTRRVNSRFA----DRWDS 360

Query: 385 DLDTADGREI 395
             +  DG+E+
Sbjct: 361 GSENEDGKEV 366

[Close]

BLAST of CSPI05G26980.1 vs. TrEMBL
Match: A0A0R0I9X5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G029500 PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 8.4e-156
Identity = 271/400 (67.75%), Postives = 326/400 (81.50%), Query Frame = 1


Query: 1   MFLNTAASKILQ-KGRQKSPFAFIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISL 60
           MF N   S +   K   K  F  IQ++ YV+VYMKWKKDSYYDSIEHI  S++LK II+L
Sbjct: 1   MFFNFKESAVKTIKLSFKYHFLHIQRYSYVNVYMKWKKDSYYDSIEHIHYSVQLKPIIAL 60

Query: 61  KNCIAQDPNGCIPISAVSKRGLEMGVSMKVARFLRLYPSIFEEFTGPEYNHPWFRLTPKA 120
           KNCI +DPNGCIPISAVSKRGLE+ V MKVARF+R YPSIFEEFTGPEYN PWFRLTP+ 
Sbjct: 61  KNCIVRDPNGCIPISAVSKRGLELDVPMKVARFMRQYPSIFEEFTGPEYNLPWFRLTPEV 120

Query: 121 VEIDAEEKKTYQNCREDLICRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNL 180
            EID +EK+ Y+ CREDL  RL+K ILM++ +VLPLKII+GMQWYLG+P DLLQ P+  L
Sbjct: 121 AEIDRDEKRVYEECREDLRSRLRKMILMTREHVLPLKIIQGMQWYLGLPSDLLQHPEQIL 180

Query: 181 DGSFKLVKMEDGLEGLSVEFEEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRR 240
           D SF+ V+MEDGL+GL++E  EK+ SV+++NA+K G YSG  ME++EFP FPSKGLRLRR
Sbjct: 181 DESFRFVEMEDGLKGLALESGEKIYSVMERNAMKSGFYSGGPMEAIEFPFFPSKGLRLRR 240

Query: 241 KIEDWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLK 300
           KIE+WL EFQKLPY+SPY++FS+LDPNSDIA+KRLVG +HE+LSLFVEHSAERKKL CLK
Sbjct: 241 KIENWLNEFQKLPYISPYDDFSNLDPNSDIADKRLVGVLHELLSLFVEHSAERKKLFCLK 300

Query: 301 KYMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMK 360
           KY GLPQK H+AFERHPHMFYLS +NKTCT ILKEAY +KS+IE+HP+LR+R+KYI LMK
Sbjct: 301 KYFGLPQKVHRAFERHPHMFYLSFRNKTCTVILKEAYSNKSAIEKHPLLRVRKKYIKLMK 360

Query: 361 ESAVILKNRRFSNHLVHGENSVLDFDLDTAD--GREIPKC 398
           +S VIL+NRR +N      N+ LD D +  D  G E+  C
Sbjct: 361 KSEVILRNRRVNNRF-SNSNAKLDIDSNDIDEKGHEMASC 399

[Close]

BLAST of CSPI05G26980.1 vs. TrEMBL
Match: A0A151SB93_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_026134 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.6e-154
Identity = 263/381 (69.03%), Postives = 323/381 (84.78%), Query Frame = 1


Query: 19  PFAFIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLKNCIAQDPNGCIPISAVSK 78
           PF +I+++ YV+VYMKWKKDSYYDSIE I +SI+LK II+LKNCI QDPNGCIPISAVSK
Sbjct: 25  PFVYIRRYSYVNVYMKWKKDSYYDSIELIHESIQLKPIIALKNCIVQDPNGCIPISAVSK 84

Query: 79  RGLEMGVSMKVARFLRLYPSIFEEFTGPEYNHPWFRLTPKAVEIDAEEKKTYQNCREDLI 138
           RGLE+ V MKVARF+R YPSIF+EFTGP+YNHPWFRLTP+A EID +EK+ Y+ CREDL 
Sbjct: 85  RGLELDVPMKVARFMRQYPSIFQEFTGPKYNHPWFRLTPEAAEIDGDEKRVYEECREDLR 144

Query: 139 CRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLDGSFKLVKMEDGLEGLSVE 198
            RL+K ILM++ NVLPLKII+GMQWYLG+P+D LQ P+ NLD SF+ V+MEDGL+GL+++
Sbjct: 145 SRLRKMILMTRENVLPLKIIQGMQWYLGLPNDFLQHPEQNLDESFRFVEMEDGLKGLALD 204

Query: 199 FEEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRRKIEDWLKEFQKLPYVSPYE 258
             EK+ SV++KNA+KRG+YSG  ME++EFP FPSKGLRLRRKIE+WL EFQKLPYVSPY+
Sbjct: 205 SGEKIYSVMEKNALKRGLYSGGPMEAIEFPFFPSKGLRLRRKIENWLHEFQKLPYVSPYD 264

Query: 259 EFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLKKYMGLPQKFHKAFERHPHM 318
           +FS+L P+SDIAEKRLVG +HE+LSLFV+HSAERKKL CLKKY GLPQK H+AFERHPHM
Sbjct: 265 DFSNLHPDSDIAEKRLVGVLHELLSLFVDHSAERKKLFCLKKYFGLPQKVHRAFERHPHM 324

Query: 319 FYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKESAVILKNRRFSNHLVHGE 378
           FYLS  NKTCT ILKEAY + S+IE+HP+ ++R+KYI LMK+S VIL+NRR ++   +  
Sbjct: 325 FYLSFSNKTCTVILKEAYNNNSAIEKHPLSKVRKKYIKLMKKSKVILRNRRLNSQFSNC- 384

Query: 379 NSVLDFDLDTAD--GREIPKC 398
           N+ LD + +  D  G EI  C
Sbjct: 385 NAKLDLNSNDLDEKGCEIASC 404

[Close]

BLAST of CSPI05G26980.1 vs. TrEMBL
Match: A0A0R0IAE9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G031300 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 4.6e-154
Identity = 264/383 (68.93%), Postives = 318/383 (83.03%), Query Frame = 1


Query: 17  KSPFAFIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLKNCIAQDPNGCIPISAV 76
           K  F  IQ++ YV++YMKWKKDSYYDSIEHI  SI+LK II+LKNCI +DPNGCIPISAV
Sbjct: 18  KYHFLHIQRYSYVNMYMKWKKDSYYDSIEHIHYSIQLKPIIALKNCIVRDPNGCIPISAV 77

Query: 77  SKRGLEMGVSMKVARFLRLYPSIFEEFTGPEYNHPWFRLTPKAVEIDAEEKKTYQNCRED 136
           SKRGLE+ V MKVARF+R YPSIFEEFTGPEYN PWFRLTP+  EID +EK+ Y+ CRED
Sbjct: 78  SKRGLELDVPMKVARFMRQYPSIFEEFTGPEYNLPWFRLTPEVAEIDRDEKRVYEECRED 137

Query: 137 LICRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLDGSFKLVKMEDGLEGLS 196
           L  RL+K ILM++ +VLPLKII+GMQWYLG+P D LQ P+  LD SF+ V+MEDGL+GL+
Sbjct: 138 LRSRLRKMILMTREHVLPLKIIQGMQWYLGLPSDFLQHPEQILDESFRFVEMEDGLKGLA 197

Query: 197 VEFEEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRRKIEDWLKEFQKLPYVSP 256
           +E  EK+ SV+++NA+K G YSG  ME++EFP FPSKGLRLRRKIE+WL EFQKLPY+SP
Sbjct: 198 LESREKIYSVMERNAMKSGFYSGGPMEAIEFPFFPSKGLRLRRKIENWLNEFQKLPYISP 257

Query: 257 YEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLKKYMGLPQKFHKAFERHP 316
           Y+ FS+LDPNSDIA+KRLVG +HE+LSLFVEHSAERKKL CL+KY GLPQK H+AFERHP
Sbjct: 258 YDYFSNLDPNSDIADKRLVGVLHELLSLFVEHSAERKKLFCLEKYFGLPQKVHRAFERHP 317

Query: 317 HMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKESAVILKNRRFSNHLVH 376
           HMFYLS +NKTCT ILKEAY +KS+IE+HP+LR+R+KYI LMK+S VIL+NRR +N    
Sbjct: 318 HMFYLSFRNKTCTVILKEAYSNKSAIEKHPLLRVRKKYIKLMKKSEVILRNRRVNNRF-S 377

Query: 377 GENSVLDFDLDTAD--GREIPKC 398
             N+ LD D +  D  G E+  C
Sbjct: 378 NSNAKLDIDSNDLDEKGHEMASC 399

[Close]

BLAST of CSPI05G26980.1 vs. TAIR10
Match: AT2G39120.1 (AT2G39120.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 496.9 bits (1278), Expect = 1.2e-140
Identity = 243/368 (66.03%), Postives = 300/368 (81.52%), Query Frame = 1


Query: 24  QKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLKNCIAQDPNGCIPISAVSKRGLEM 83
           QK  YVDVYMKWK+D Y+D+IEHI +S +LKS++SLKNCI Q+PN CIPISA+SK+  + 
Sbjct: 20  QKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQF 79

Query: 84  GVSMKVARFLRLYPSIFEEFTGPEYNHPWFRLTPKAVEIDAEEKKTYQNCREDLICRLKK 143
            VS K+A FLR +PSIFEEF GPEYN PWFRLTP+A E+D +E+  YQ   +DL  RLKK
Sbjct: 80  DVSTKIAHFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKK 139

Query: 144 FILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLDGSFKLVKMEDGLEGLSVEFE--E 203
            ILMSK+NVLPL I++GM+WYLG+PDD LQ PD+NLD SF+ V MEDG++GL+V++   +
Sbjct: 140 LILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGD 199

Query: 204 KLMSVIQKNAIK--RGVYSGRTMESLEFPLFPSKGLRLRRKIEDWLKEFQKLPYVSPYEE 263
           K++SV+QKNA+K  RG  S   +E +EFPLFPSKG RLR KIEDWL EFQKLPYVSPY++
Sbjct: 200 KVLSVLQKNAMKKRRGEVS---LEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYDD 259

Query: 264 FSHLDPNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLKKYMGLPQKFHKAFERHPHMF 323
           +S LDP+SDIAEKR+VGF+HE+L LFVEHSAERKKLLCLKK+ GLPQK HKAFERHP +F
Sbjct: 260 YSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIF 319

Query: 324 YLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKESAVILKNRRFSNHLVHGEN 383
           YLS+KNKTCTAIL+E Y DK+S+E HP+L +R+KYI LMK S +ILK+RR  N     + 
Sbjct: 320 YLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRR--NSFGFRDE 379

Query: 384 SVLDFDLD 388
            V+D DLD
Sbjct: 380 GVVDKDLD 382

[Close]

BLAST of CSPI05G26980.1 vs. TAIR10
Match: AT5G48040.1 (AT5G48040.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 210.7 bits (535), Expect = 1.7e-54
Identity = 124/358 (34.64%), Postives = 206/358 (57.54%), Query Frame = 1


Query: 8   SKILQKGRQKSPFAFIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLKNCIAQDP 67
           S  L K R++  F + Q+ G V+V +KW KD   D++  + +   L+++ +L + I+  P
Sbjct: 12  STSLCKCRERFDFFYQQRCGLVNVKLKWVKDRELDAV--VVREKHLRAVCNLVSVISASP 71

Query: 68  NGCIPISAVSKRGLEMGV--SMKVARFLRLYPSIFEE---FTGPEYNHPWFRLTPKAVEI 127
           +  +PI  +     ++G+   +K++ F+R YP+IF E   +     + P F LT + +++
Sbjct: 72  DLRLPIFKLLPHRGQLGLPQELKLSAFIRRYPNIFVEHCYWDSAGTSVPCFGLTRETIDL 131

Query: 128 DAEEKKTYQNCREDLICRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLDGS 187
             EE    +    D++ RL K ++++    L L  I  ++W LG+P D            
Sbjct: 132 YYEEVDVSRVNERDVLVRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDL 191

Query: 188 FKLVKMEDGLEGLSVEFEEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRRKIE 247
           F LVK+   L+GL +   ++ ++V Q   ++  V +    E + FP+  ++G  L+RK  
Sbjct: 192 FSLVKLSSDLDGLKLIHWDEHLAVSQMQ-LREDVGND---ERMAFPVKFTRGFGLKRKSI 251

Query: 248 DWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLKKYM 307
           +WL+E+Q+LPY SPY + SHLDP +D++EKR VG  HE+L L +    ERK +  L+K  
Sbjct: 252 EWLQEWQRLPYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPF 311

Query: 308 GLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKE 361
            LPQKF K FERHP +FY+S+K  T T IL+EAY  +  IE+HP++ +R K+ ++M E
Sbjct: 312 ALPQKFTKVFERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNE 363

[Close]

BLAST of CSPI05G26980.1 vs. TAIR10
Match: AT3G58520.1 (AT3G58520.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 198.4 bits (503), Expect = 8.6e-51
Identity = 115/341 (33.72%), Postives = 192/341 (56.30%), Query Frame = 1


Query: 31  VYMKWKKDSYYDSIEHITKSIELKSIISLKNCIAQDPNGCIPISAVSKRGLEMGVSMKVA 90
           V +KW K+   D +  I    +LK+   LK+ I + P G +   +V+     +G+++ V 
Sbjct: 31  VRLKWVKNKNLDHV--IDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVPVL 90

Query: 91  RFLRLYPSIFEEFTGPEY-NHPWFRLTPKAVEIDAEEKKTYQNCREDLICRLKKFILMSK 150
           RFLR YP++F EF    Y + P F+LT  A+ +D++E+  +Q+   D + RL + ++M +
Sbjct: 91  RFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMMR 150

Query: 151 NNVLPLKIIRGMQWYLGIPDDLLQKPDVNLDGSFKLVKMEDGLEGLSVEF--EEKLMSVI 210
           +  + L+ +  +++ LG+PD+  +   +     F  VK  +G   L +    +E   S +
Sbjct: 151 SKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEFAFSAL 210

Query: 211 QKNAIKRGVYSG---------RTMESLEFPLFPSKGLRLRRKIEDWLKEFQKLPYVSPYE 270
           QK      V SG         R   +L FP+   +G   ++K++ W+ EFQKLPY+SPY+
Sbjct: 211 QKRNEDNDV-SGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYISPYD 270

Query: 271 EFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLKKYMGLPQKFHKAFERHPHM 330
           + S++DP SD+ EKR V  +HE+LSL +    +R  L  ++  + +P KF + F R+P +
Sbjct: 271 DPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTRYPGI 330

Query: 331 FYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMK 360
           FYLSLK KT T ILKE Y     ++ HP+ R+R K+ H+M+
Sbjct: 331 FYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMR 368

[Close]

BLAST of CSPI05G26980.1 vs. TAIR10
Match: AT4G24320.1 (AT4G24320.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 191.4 bits (485), Expect = 1.0e-48
Identity = 118/358 (32.96%), Postives = 196/358 (54.75%), Query Frame = 1


Query: 21  AFIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLKNCIAQDPNGCIPISAVSKRG 80
           A  Q+  +V+  +KW  D Y D  E + +   LK +ISLK+ I   P+  +P+S++S   
Sbjct: 11  ALQQRRTFVNARVKWVSDHYLD--EAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLK 70

Query: 81  LEMGVSMKVARFLRLYPSIFEEFTGPEYNHPWF-RLTPKAVEIDAEEKKTYQNC--REDL 140
             + + +  A F + YPS+F  F  P  +HP   RLTP+A+ +  EE+  + +   R   
Sbjct: 71  PLVNLHITAAAFFQKYPSVFTTFQ-PSPSHPLHVRLTPQALTLHKEEETIHLSPPQRNVT 130

Query: 141 ICRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLDGSFKLVKMEDGLEG--- 200
           + RL KF++++    LPL ++   ++ LG+P D +     +    F++ +++D L G   
Sbjct: 131 VQRLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKT 190

Query: 201 -----------LSVEFEEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRRKIED 260
                      L V   E+  + I  + +K+G+   R   S+ FP    KG  L +++++
Sbjct: 191 LALTISSRRNNLPVSEMERREATIDGSRVKKGL---RIRYSMNFP----KGYELHKRVKN 250

Query: 261 WLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLKKYMG 320
           W++++Q LPY+SPYE   HL   SD AEK  V  +HE+L L V    E   ++CL +Y+G
Sbjct: 251 WVEQWQNLPYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLG 310

Query: 321 LPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKES 362
              +F KA   HP +FY+S K +T T +L+EAY     +E+HP++ IR +YI+LM +S
Sbjct: 311 FGMRFKKALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKS 358

[Close]

BLAST of CSPI05G26980.1 vs. TAIR10
Match: AT1G71850.1 (AT1G71850.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 181.8 bits (460), Expect = 8.3e-46
Identity = 107/348 (30.75%), Postives = 194/348 (55.75%), Query Frame = 1


Query: 47  ITKSIELKSIISLKNCIAQDPNGCIPISAVSKRGLEMGVSMKVARFLRLYPSIFEEFT-G 106
           + +   L+ ++S+K+ I  +P   +PIS ++ +   + V ++   F+R +PS+F+EF  G
Sbjct: 41  VEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVPLRPIEFIRSFPSVFQEFLPG 100

Query: 107 PEYNHPWFRLTPKAVEIDAEEKKTY--QNCREDLICRLKKFILMSKNNVLPLKIIRGMQW 166
               HP   LTP+ +  DA+E+  Y  +  ++ L  RL K +++++ N +PL+I+  ++W
Sbjct: 101 GIGIHPHISLTPEILNHDADEQLVYGSETYKQGLADRLLKLLMINRINKIPLEILDLLKW 160

Query: 167 YLGIPDDLLQKPDVNLDGSFKLVKMEDGLEGLSVEFE------EKLMSVIQKNA--IKRG 226
            LG+P D ++         F+++K +  L G S E E      E  +SV++K A  +++G
Sbjct: 161 DLGLPKDYVETMVPEFPDYFRVIKSK--LRGCSGELELVCWSNEHAVSVLEKKARTLRKG 220

Query: 227 VYSGRTMESLEFPLFPSKGLRLRRKIEDWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLV 286
            Y+  +  ++ FP+  S G  + +K++ W+ ++QKLPY+SPYE   HL   SD ++K   
Sbjct: 221 EYTKGS--AIAFPMKFSNGFVVDKKMKKWIDDWQKLPYISPYENALHLSATSDESDKWAA 280

Query: 287 GFIHEMLSLFVEHSAERKKLLCLKKYMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEA 346
             +HE+++LFV    E+  +L L ++MGL  +F +    HP +FYLS K +T T +L++ 
Sbjct: 281 AVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRVLHNHPGIFYLSSKLRTHTVVLRDG 340

Query: 347 YCDKSSIERHPILRIRRKYIHLMK-----ESAVILKNRRFSNHLVHGE 379
           Y     IE + ++  R +Y+ LM        AV   +++     V GE
Sbjct: 341 YKRGMLIESNELVTSRNRYMKLMNTVKKDNKAVSSSSKKEDKGKVEGE 384

[Close]

BLAST of CSPI05G26980.1 vs. NCBI nr
Match: gi|449449483|ref|XP_004142494.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus])

HSP 1 Score: 803.1 bits (2073), Expect = 2.2e-229
Identity = 395/397 (99.50%), Postives = 395/397 (99.50%), Query Frame = 1


Query: 1   MFLNTAASKILQKGRQKSPFAFIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLK 60
           MFLNTAASKILQKGRQKSPFAFIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLK
Sbjct: 1   MFLNTAASKILQKGRQKSPFAFIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLK 60

Query: 61  NCIAQDPNGCIPISAVSKRGLEMGVSMKVARFLRLYPSIFEEFTGPEYNHPWFRLTPKAV 120
           NCIAQDPNGCIPISAVSKRGLEMGVSMKVARFLRLYPSIFEEFTGPEYNHPWFRLTPKAV
Sbjct: 61  NCIAQDPNGCIPISAVSKRGLEMGVSMKVARFLRLYPSIFEEFTGPEYNHPWFRLTPKAV 120

Query: 121 EIDAEEKKTYQNCREDLICRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLD 180
           EIDAEEKKTYQNCREDLICRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLD
Sbjct: 121 EIDAEEKKTYQNCREDLICRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLD 180

Query: 181 GSFKLVKMEDGLEGLSVEFEEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRRK 240
           GSFKLVKMEDGLEGLSVE EEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRRK
Sbjct: 181 GSFKLVKMEDGLEGLSVECEEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRRK 240

Query: 241 IEDWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLKK 300
           IEDWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHS ERKKLLCLKK
Sbjct: 241 IEDWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSTERKKLLCLKK 300

Query: 301 YMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKE 360
           YMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKE
Sbjct: 301 YMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKE 360

Query: 361 SAVILKNRRFSNHLVHGENSVLDFDLDTADGREIPKC 398
           SAVILKNRRFSNHLVHGENSVLDFDLDTADGREIPKC
Sbjct: 361 SAVILKNRRFSNHLVHGENSVLDFDLDTADGREIPKC 397

[Close]

BLAST of CSPI05G26980.1 vs. NCBI nr
Match: gi|659092014|ref|XP_008446854.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 761.9 bits (1966), Expect = 5.5e-217
Identity = 376/397 (94.71%), Postives = 384/397 (96.73%), Query Frame = 1


Query: 1   MFLNTAASKILQKGRQKSPFAFIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLK 60
           MFLNTAASKILQK RQKSPF FIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLK
Sbjct: 1   MFLNTAASKILQKCRQKSPF-FIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLK 60

Query: 61  NCIAQDPNGCIPISAVSKRGLEMGVSMKVARFLRLYPSIFEEFTGPEYNHPWFRLTPKAV 120
           NCIAQDPNGCIPISAVSKRGL+M +SMKVARFLRLYPSIFEEFTGPE+NHPWFRLTPKAV
Sbjct: 61  NCIAQDPNGCIPISAVSKRGLQMDISMKVARFLRLYPSIFEEFTGPEHNHPWFRLTPKAV 120

Query: 121 EIDAEEKKTYQNCREDLICRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLD 180
           EIDAEEK +YQNCREDLICRLKKFILMSKNNVLPLKII+GMQWYLGIPDD LQKP+VNLD
Sbjct: 121 EIDAEEKMSYQNCREDLICRLKKFILMSKNNVLPLKIIQGMQWYLGIPDDFLQKPEVNLD 180

Query: 181 GSFKLVKMEDGLEGLSVEFEEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRRK 240
           GSFKLVKMEDGLEGLSVE EEK MS IQKNAIKRGVYSGRTME LEFPLFPSKGLRLRRK
Sbjct: 181 GSFKLVKMEDGLEGLSVECEEKFMSAIQKNAIKRGVYSGRTMELLEFPLFPSKGLRLRRK 240

Query: 241 IEDWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLKK 300
           IEDWLKEFQKLPYVSPYE+FSHLDPNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLKK
Sbjct: 241 IEDWLKEFQKLPYVSPYEDFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLKK 300

Query: 301 YMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKE 360
           YMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYI+LMKE
Sbjct: 301 YMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYINLMKE 360

Query: 361 SAVILKNRRFSNHLVHGENSVLDFDLDTADGREIPKC 398
           S VILKNRR SNHLVH ENSVLDFDLD ADGREIPKC
Sbjct: 361 SIVILKNRRLSNHLVHRENSVLDFDLDAADGREIPKC 396

[Close]

BLAST of CSPI05G26980.1 vs. NCBI nr
Match: gi|645254990|ref|XP_008233291.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume])

HSP 1 Score: 583.2 bits (1502), Expect = 3.5e-163
Identity = 281/379 (74.14%), Postives = 325/379 (85.75%), Query Frame = 1


Query: 19  PFAFIQKFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLKNCIAQDPNGCIPISAVSK 78
           P  + QKF YVDVYMKWKKDSYYDSIE I KSI LK IISLKNCI+QDPNGCIPIS VSK
Sbjct: 33  PHTYTQKFNYVDVYMKWKKDSYYDSIEQIHKSIVLKPIISLKNCISQDPNGCIPISDVSK 92

Query: 79  RGLEMGVSMKVARFLRLYPSIFEEFTGPEYNHPWFRLTPKAVEIDAEEKKTYQNCREDLI 138
           RG+++ V MKVARF+RLYPSIFEEFTGP+YN PWFRLTP+A EID EEK+ Y++CREDL 
Sbjct: 93  RGIQLEVPMKVARFVRLYPSIFEEFTGPQYNLPWFRLTPEADEIDREEKRVYEDCREDLR 152

Query: 139 CRLKKFILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLDGSFKLVKMEDGLEGLSVE 198
            RLKKFILMSK  VLPLKII+GMQWYLG+PDD LQ PD NLD SF+ V+MEDGL+GL+VE
Sbjct: 153 DRLKKFILMSKEKVLPLKIIQGMQWYLGLPDDFLQHPDKNLDESFRFVEMEDGLKGLAVE 212

Query: 199 FEEKLMSVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRRKIEDWLKEFQKLPYVSPYE 258
             EK++S +Q+NA+K+GVY G  ME++EFPLFPSKGLRLRRKI DWLKEFQKLPYVSPYE
Sbjct: 213 SGEKVLSTVQRNAMKKGVYLGGPMEAIEFPLFPSKGLRLRRKIVDWLKEFQKLPYVSPYE 272

Query: 259 EFSHLDPNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLKKYMGLPQKFHKAFERHPHM 318
           EFSHLDP+SDI+EKR+VG +HE+LSLFVEHSAERKKLLCLKK+MGLPQK HKAFERHP M
Sbjct: 273 EFSHLDPDSDISEKRVVGLLHELLSLFVEHSAERKKLLCLKKHMGLPQKVHKAFERHPSM 332

Query: 319 FYLSLKNKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKESAVILKNRRFSNHLVHGE 378
           FYLSL+NKTCTAILKEAYCD+S+IERHP+LR+R KYI+LM+ESA ILK RR ++      
Sbjct: 333 FYLSLRNKTCTAILKEAYCDESTIERHPLLRVRNKYINLMRESATILKTRRVNSRFA--- 392

Query: 379 NSVLDFDLDTADGREIPKC 398
               D   +  DG+E+ +C
Sbjct: 393 -DRWDSGSENEDGKEVAEC 407

[Close]

BLAST of CSPI05G26980.1 vs. NCBI nr
Match: gi|1009121017|ref|XP_015877233.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ziziphus jujuba])

HSP 1 Score: 573.2 bits (1476), Expect = 3.6e-160
Identity = 281/404 (69.55%), Postives = 336/404 (83.17%), Query Frame = 1


Query: 1   MFLNTAASKILQKGRQKS--------------PFAFIQKFGYVDVYMKWKKDSYYDSIEH 60
           MF+ + +SK L+K    S              P+A+ Q   YV+VYM+WKKD  YDSIE 
Sbjct: 1   MFIISCSSKTLKKFLSSSERSIFSVQYPLHNPPYAYTQTSNYVNVYMEWKKDPSYDSIEQ 60

Query: 61  ITKSIELKSIISLKNCIAQDPNGCIPISAVSKRGLEMGVSMKVARFLRLYPSIFEEFTGP 120
           I KSIELK +++LKN IAQ+P+GCIPISAVSKRG+E+GV MKVARFLRLYPSIFEEF+GP
Sbjct: 61  IHKSIELKPVVALKNIIAQEPSGCIPISAVSKRGIELGVPMKVARFLRLYPSIFEEFSGP 120

Query: 121 EYNHPWFRLTPKAVEIDAEEKKTYQNCREDLICRLKKFILMSKNNVLPLKIIRGMQWYLG 180
           +YN PWFRLT +AVEID EE++ Y++CR+D   RLK+FILMSK  VLPLKII+GMQWYLG
Sbjct: 121 KYNLPWFRLTREAVEIDREERRIYEDCRKDSRERLKRFILMSKGKVLPLKIIKGMQWYLG 180

Query: 181 IPDDLLQKPDVNLDGSFKLVKMEDGLEGLSVEFEEKLMSVIQKNAIKRGVYSGRTMESLE 240
           +PDD L  P+ NLDGSF+ V+MEDGL GL+V+ EEK+ S +QK+A+KRGVYSG +ME++E
Sbjct: 181 LPDDFLLYPERNLDGSFRFVEMEDGLNGLAVQNEEKVWSAMQKSAMKRGVYSGGSMEAIE 240

Query: 241 FPLFPSKGLRLRRKIEDWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFV 300
           F LFPSKGLRLRRKI DWL+EFQKLPY+SPYEEFSHLDP+SD+AEKR+VGF+HE+LSLFV
Sbjct: 241 FQLFPSKGLRLRRKIADWLEEFQKLPYISPYEEFSHLDPDSDMAEKRVVGFLHELLSLFV 300

Query: 301 EHSAERKKLLCLKKYMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHP 360
           EHSAERKKLLCLKK MGLPQK HKAFERHPH+FYLSL NKTCTAILKEAYC++S+IE+HP
Sbjct: 301 EHSAERKKLLCLKKCMGLPQKVHKAFERHPHIFYLSLMNKTCTAILKEAYCNQSTIEKHP 360

Query: 361 ILRIRRKYIHLMKESAVILKNRRFSNHLVHGENSVLDFDLDTAD 391
           +L +R+KYI+LMKES VILKNRR SN  V+ EN  L  DLD  D
Sbjct: 361 VLSVRKKYINLMKESVVILKNRRLSNRFVNQENLSLALDLDYVD 404

[Close]

BLAST of CSPI05G26980.1 vs. NCBI nr
Match: gi|596027043|ref|XP_007219231.1| (hypothetical protein PRUPE_ppa017812mg, partial [Prunus persica])

HSP 1 Score: 570.1 bits (1468), Expect = 3.1e-159
Identity = 276/370 (74.59%), Postives = 318/370 (85.95%), Query Frame = 1


Query: 25  KFGYVDVYMKWKKDSYYDSIEHITKSIELKSIISLKNCIAQDPNGCIPISAVSKRGLEMG 84
           KF YVDVYMKWKKDSYYDSIE I KSI LK IISLKNCI+QDP GCIPIS VSKRG+++ 
Sbjct: 1   KFNYVDVYMKWKKDSYYDSIEQIHKSIMLKPIISLKNCISQDPGGCIPISDVSKRGIQLE 60

Query: 85  VSMKVARFLRLYPSIFEEFTGPEYNHPWFRLTPKAVEIDAEEKKTYQNCREDLICRLKKF 144
           V MKVARFLRLYPSIFEEFTGP+YN PWFRLTP+A EID EEK+ Y++CREDL  RLKKF
Sbjct: 61  VPMKVARFLRLYPSIFEEFTGPQYNLPWFRLTPEADEIDREEKRVYEDCREDLRDRLKKF 120

Query: 145 ILMSKNNVLPLKIIRGMQWYLGIPDDLLQKPDVNLDGSFKLVKMEDGLEGLSVEFEEKLM 204
           ILMSK  VLPLKIIRGMQWYLG+PDD LQ PD NLD SF++V+MEDGL+GL+VE  EK++
Sbjct: 121 ILMSKEKVLPLKIIRGMQWYLGLPDDFLQHPDKNLDESFRIVEMEDGLKGLAVESGEKVL 180

Query: 205 SVIQKNAIKRGVYSGRTMESLEFPLFPSKGLRLRRKIEDWLKEFQKLPYVSPYEEFSHLD 264
           S +Q+NA+K+GVY G  ME++EFPLFPSKGLRLRRKI DWLKEFQKLPYVSPYEEFSHLD
Sbjct: 181 STVQRNAMKKGVYVGGPMEAIEFPLFPSKGLRLRRKIVDWLKEFQKLPYVSPYEEFSHLD 240

Query: 265 PNSDIAEKRLVGFIHEMLSLFVEHSAERKKLLCLKKYMGLPQKFHKAFERHPHMFYLSLK 324
           P+SDI+EKR+VG +HE+LSLFVEHSAERKKLLCLKK+MGLPQK HKAFERHP MFYLSL+
Sbjct: 241 PDSDISEKRVVGLLHELLSLFVEHSAERKKLLCLKKHMGLPQKVHKAFERHPSMFYLSLR 300

Query: 325 NKTCTAILKEAYCDKSSIERHPILRIRRKYIHLMKESAVILKNRRFSNHLVHGENSVLDF 384
           NKTCTAILKEAYCD+S+I+RHP+L +R KYI+LM+ESA I K RR ++          D 
Sbjct: 301 NKTCTAILKEAYCDESAIQRHPLLSVRNKYINLMRESATIFKTRRVNSRFA----DRWDS 360

Query: 385 DLDTADGREI 395
             +  DG+E+
Sbjct: 361 GSENEDGKEV 366

The following BLAST results are available for this feature:

BLAST of CSPI05G26980.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RPD1_ARATH	4.6e-22	26.84	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1	[more]

BLAST of CSPI05G26980.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTJ8_CUCSA	1.5e-229	99.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G622690 PE=4 SV=1	[more]
M5XN03_PRUPE	2.1e-159	74.59	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017812mg PE=4 S...	[more]
A0A0R0I9X5_SOYBN	8.4e-156	67.75	Uncharacterized protein OS=Glycine max GN=GLYMA_09G029500 PE=4 SV=1	[more]
A0A151SB93_CAJCA	1.6e-154	69.03	Uncharacterized protein OS=Cajanus cajan GN=KK1_026134 PE=4 SV=1	[more]
A0A0R0IAE9_SOYBN	4.6e-154	68.93	Uncharacterized protein OS=Glycine max GN=GLYMA_09G031300 PE=4 SV=1	[more]

BLAST of CSPI05G26980.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39120.1	1.2e-140	66.03	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	1.7e-54	34.64	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.1	8.6e-51	33.72	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G24320.1	1.0e-48	32.96	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT1G71850.1	8.3e-46	30.75	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

BLAST of CSPI05G26980.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449483\|ref\|XP_004142494.1\|	2.2e-229	99.50	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus]	[more]
gi\|659092014\|ref\|XP_008446854.1\|	5.5e-217	94.71	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo]	[more]
gi\|645254990\|ref\|XP_008233291.1\|	3.5e-163	74.14	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume]	[more]
gi\|1009121017\|ref\|XP_015877233.1\|	3.6e-160	69.55	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ziziphus jujuba]	[more]
gi\|596027043\|ref\|XP_007219231.1\|	3.1e-159	74.59	hypothetical protein PRUPE_ppa017812mg, partial [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR021099	PORR_domain

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0000373	Group II intron splicing
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI05G26980	CSPI05G26980	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI05G26980.1	CSPI05G26980.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G26980.1.utr3p2	CSPI05G26980.1.utr3p2	three_prime_UTR
CSPI05G26980.1.utr3p1	CSPI05G26980.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G26980.1.cds1	CSPI05G26980.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G26980.1.utr5p1	CSPI05G26980.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 36..361 score: 4.4E
None	No IPR available	PANTHER	PTHR31476	FAMILY NOT NAMED	coord: 22..390 score: 2.2E
None	No IPR available	PANTHER	PTHR31476:SF13	GROUP II INTRON SPLICING PROTEIN WTF9	coord: 22..390 score: 2.2E