CSPI05G00180.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAAAAGCCAAAGGTTGTGAGCTGTGAAAAAGACACAAGGCATGACAGTCTCTAAACTACATTCAAACAAAATTCCATCTCTTATTTATTCTTCATTCTTCTCCTTCTTCTTCTTCTTCTTCCTTTATTTCTTTTATATTGTGTTTCCTATATTTTTAGTCCACAACGAAACTCCATAGCTACTTCTCTTCTTCCTCCTCCTCAACTCAACGCCCTCTCTTTACCCTTTTCCTTCTTTAACTTCAACCCAAACAAAAAGAAAAAAAGAAAACTAAAAAACGTTAAATTACTTTGATTTTGTTTCAATGGGTATTGGTACTTCTTGCCCTGCTCTTCTGTTCAACACCTTTCCCCTTTTCTCAAACCTTCTCATATTCCTTGCTTTCCCTCTGAATATTCATCATTTTCACTTTACTTTCCCATTACCAATCTAAATTAGAAATCTCAATTTCAACATCACTAAATTAGGGAATCCCCTCTTCTTTTCTCTGTTCTTTGCTTTTCTGTCTGCATGTTCCACGATTTTGGATCAACATGATCAAAGCCTTCGCATCTGTAACATCTCTCACCTTTCCTTTTTTATTCTTTTGCTCTTTGTTTTGGTAACCCATTTGCCTTATGCCTCTTTATTTTGCTCTTCTTTGATGATTTTTTTCTGGGTCGTCCTTATTTTATCCTTTTTGTGCTTTCTGGTGCTTTAGGACTCTGGGGCTCTTCGTTTGAGATTTGGCTTTTAAATTTCGAATTTGGAATTTCTGGGTTGCGGTTATTTGTTTGGAGACAGAGGGAAATTGACTGTTGTATTGATTTTCTGAATGCCTTTATTGCTGTTTTAATCTTTCAAATGGGTTGTTGTTGGTTTGATCTCTTGGATTTTGATACTCACTTCATTAAGTTTTATGTGTCTTCCTTTTTTCATATTGCTCTGCTTCTTTTGGTAGGCATTAGAGAGTAGAGGATCATTTTGGGTAGCAATAGTGAGTTGAATTTAATTTTTGAACTGTATTTTTGAGCTCTCTCAACTCAATTCTAGTTCATGGGTTGTTGTAACTCCACTTTTCAACTTAGAAGCTTGTAATTTCTACTGGGCAAGTATACTATTACCATTATTCTTTGTTTTTTTTTTCCTTCCTATACAAAAAGGAGAAAAAATCCTAAAACACAAGTACTTAGGAATTTGAGATTTGAAGAATTTAATTTTGTCAACCTTCTTAATGGGGATGAATAATTTCAGAATTGCATATGACGTTGTTACTTAATTTTGATTTTTGGTGGATAATTGGCAATCAGAATCTTTGGAAGCTATCAAAATTGCAGTTTCTCCAATATTGTTGCTGCAATATTGGTTTGTTATTTTTACAAGTTATTGAAAGCACTTTGCCCCTCTCCATGGCTCTCTAAATCAAATAGATAACTCCTATCATTATTTTTTTCATTTTTATTTACATAATTTGAATGTTTCTCGTTTAACTCATTTTCCATATTTCAGAATTCCATACTATCAGACGCAAAGAATAGATTGCGCATCTATACTTTCTTTGCTGCCTTATTACTTGGTGCTGGAGTTTATTTCATTGCAAATGAATTTATTACAAAGGTAGAAAATTGAAGCATAGTTTTCCATAATTCTTGTAGCATGCTGTATGCATAGATATGACATCGGCAGAATATCTTGAAGGTTAAGTTAATGGGTTCAAGGTGCCCAGTTGAGGTTAATAATATTCGTAGTGCTGAGATTGAGTTAATCATCTTCATGTTGGATTTCAAATAATTAGCTTTCTTACAGCTTTCAAAATTTTGATCCTGCATCTAAAGCATTGGCTTTGCAGACTACCGTGCATTCACCATCTATATTTCTTGAATATAGGCCCTAGATTGCTCGATGGTTAAGTAAAAATCCGAATTAACACCAGTCCTCTGCTCTTGGAAGAATGCTTGTTTATGAGTTGTTAATCTCCTTTCAATTGATAGTCATTGGGTTAATATTTGTTGTATTGTCTCACTGGGTATTATTATGCCCAAAGTGTTATTCTTATGTAGATTATAAGTTTATGTTAGATGATGTAATATTAAATTTGTCTTAAGCTGATGGGTCAATAGGTGATTTAAGATTTTATAGCCATTCTTGTTAGCACATATCATCATGCATTCAAGTCATAACGATAGGATCATCATTCGAAATGAGTCCATAATGGATATTTGACAAACTTGCAGGGAAGTTTTAGATGGGAGGTTTTTTATTCTGCCCAAAATGTAAAATCGAGCACATGCAAGGTTCGTCTAGTCAAACCCTGAGTTCTTTTTATGGTTTATCATTGACTTTTGTTCTAGTTTAATAAGTTTTCTAAATCCTTCGCTCCCACCTCATCTTCCTTGCTTCGTAGAATCAATGCAGGCCTCCTGGGAGCGAGTCTTTACCAGAAGGAATCATTAGTAAAACATCTAACTTTGAATTTCAGCCTCTTTGGGGCTCGTCTTTACAAAATGTAAGTGATTTGTAGATTGAAATCTTGCTTACCAGATTTCTGATATGAACCTCTTTTGTCCAATGAAATGTAATTTTTCTTATGTTTGAATAGAGTGTTCAGTTCACTTATATTGAGAGTGGGAAGTTAAAATTTCAGTTTTCATGATTTGTTGATAAATGATTTAAGATAAGTACTTTGTTTCAATCAAGTACATGGCTTGGTTAATTCATTTAATAGTACATTCCAACTATTTCACTTATATACAACTTGGTTGATGAATAAACAAAATCTGTATATAAAAACTACAAGTATTTATTATTTGGGCCGAAAAATGATGATCTAATTCATCACTGTTAATTAAAAATATGTTTTGTGCCAGAAAAAGCCGAAGGTTTCCAAGAACTTATTAGCAATTGCTGTTGGAATCAAACAGAGACATGTAGTGTCAAAAATTATTGAAAAGGTTGTGATTTGATGCCCTTATTCTTTAGTACATCTTTTTAGCAATCTGTTCCCTTAGTTGCTTGTTAATACATATTTTTCATTTTCAGTTCCCTCAAGATGATTTCGACGTGATTCTTTTTCATTACGATGGTGTTGTGGATGAATGGAGGGAATTTGCATGGTATTCTCGTGCACTACATGTCTCTGCAATAAATCAAACAAAATGGTAATATTTACTTCTGAAATTGATGATTATGTTCAGTTTCAATCTCTCGATCATATGTATTACACCGACTTGAAGTTGCTTCCTTCTTTACACTTTAAATTGGAAATATAATTGGAATACAACTTTCTATGGCATAGGTGGTTTGCCAAGCGTTTCTTGCATCCAGATATAGTTGCTGAATATAATTATATATTTCTTTGGGATGAGGATCTTGGCGTTGATTATTTTGACCCAAAACGGTAGGTATTTTTGTCCTTTCAAGTTTGTTGAGTTAATGGTAATCTCTTATGATATGTTAAATTTGAATTTGATGTTCCTGGTTATAGAAGTTTTAGTTGTTTTTGTTTTAACATATGATATCATGCTTTACAGGTAAAACATACCTTTGGTTCCTAAACTTCCATAAAAGAAATAATTTAGCTAGTCCTAGTTAGTTTTATTATGTAACAGTTTAGTTTTTATATTCTCAAACCTATAAAGAATTTGATCTATAGACATTAGTATGTTAACAATTTAGTTTCTATACGTTATATATGTGTGTTATTTCTTTTACTCAATTTCACTGCTATATCTTCTTTCCTTCATATAAAACTATGTCAGATATATATCAATCCTCAAGGAGGAGGGGCTTGAGATATCACAACCAGCTCTCGATCCTGTTAAGTCCAAGGTGCACCAGCCGCTTACTGCACGCAAAACAGGATCGAAAGTTCACAGGTCAGTTTTGTACATGGCATTTTTGTACTGATCTTTTGTACTTTTACCGTTATATTGCTATCGTTTGAGACCATGAGTCTAGACAACTTATATGCATTCAGTAGAAACTTTATGGGTTTTCACATTGAACAAAAAATAGTCATTTTCCGCAATGGTTGAGTTTGAACTTTCGAGCTAGCCTCTTATTGGTTCCACAAAGTTTACTTGAAAGAAATGTCTATTTTAGGTTTCAGAGACCTATTAAATGCTATAATGATGTTTTCTCACCCTCCAAATTGTTTCCCATTAATCTGTCACATCTAAAATGTCATGTTCTCTGGTTTTATTTTTGCTGCACTGCGTATTGAGTCTTCAATTCACCCGTACTTATGTTGACCAGTTTTCTTTAATTTTCAAACAGAAGGTTTTATAACTTCAAAGGCACTGGACGGTGCTATGCTAATAGCACAGGTCCTCCATGCACAGGGTAAAAGTATTATTGATCCTTTCGATGACAGGGTTTTTCTAATTTTTCTAATATTGGATTCAAACAGGTTAATAAATTGTATATATTTAATAAATTTGATGTAGATGGGTTGAAATGATGGCTCCTGTGTTCTCAAGGGCAGGATGGAGATGCACATGGTATATGATTCAGGTAAATAAACTACTATTGACTGAGATTCAAAGAATACATCTCAAAAGTAGGAGTAGAAATTATCTTTAAACTATTTTGTAAGACTAATCTTTTGAAAGAGCATAAATTTTTTAAATCTCAAAAATGTTTTCCAAAGGATATTGTTTGCTCTTGAACTACCTGAGATCAGTACATAGGTGTTGAGAGCTATATGGTTCGGTCTCACATCCACGACCTGGGGTTTATATGTAATGACAGTACCACTAAGTTTAAAGTATTATGTTTAAATTTGATTCACTCCTTGTGTGAAAATTTCAACTATCCACATGTATACAGAAATTTAATGCCAAAATACCCTGGCTATTACTTTCTCTCTGCTTTACAGAATGACTTGATCCATGCATGGGGATTAGATAGACAGCTTGGCTACTGTGCACAAGTAAATTTCATACTAAACCATTACGATAACTTGGCTTTTAAGCCATTATTTTCTTGTTGAGTTTGTAATTATGGATTCTCTTTTAGGGTGACCGAACAAAAAAAGTTGGTGTCGTTGATGCAGAATACATAGTACATTTAGGACTGCCAACGCTTGGTGCTTCCCATGATAACGCGGTAAAGTTCTTCAGTCAAACCATCCTGTGAATTTAGGACTTCAACCGGTCATTTGTTGCACTTACTATTACTGTGATTTTTCTCTAGCTTTCATTTAGCATTAAGTTATCCAGTGTATATTATGGCACTAAACTGACCTTCCCATCCGAGCAGCTGAATTCCGATGCTGCGTTGAAGAAAGACTCATCAAACTTAGATAGATCGGTTTGTCTTCTGAAAACTCTAAACTCACCCAAATTTATATTCCATTTTCTTCCATTATAAGACCTAGTTTAGTGTTCAATTCTTGCAGGAACCCCAAGTGAATAATAGAGTCAAAGTAAGTTACTACAATCAATCCCAGTATTTCTTTTTTTCCGATCTTGAGTAGGTTGTTAGTGGTTTGTAATTTATCCTAAAATGTGTAGGTGAGGATGCAATCTTCCTTAGAAATGCAGATTTTCAAGGATCGATGGACTGATGCAGCAAAGAATGACAGATGTTGGATCGACCCTTATCCGTAATTACAAAAGTCAACCATTGTTATTTTGATTATTTTATTTACATACATATGAAATAAAGCTGGAAGTGAAGGTGTTCCAGTCTCCATTAACAGAGCTCAAACACAGCTGGAGCATTCAGGCTTGGATAAGATTGAAGATATCTCATAACAACTTATACCCAACAAATTCAAATAACCAAGGACGATGCTTTCCATTTGGAATCAACTTGGCCTTTTTTTACTCTATACAAAATAATGTCTTTCAAAAGGTTGGTTGTTTATTTATTTATTGTTATTATTTTTTGGGAGGGTTTGTTGTAAATGCATTATAGTTTTCCTAGAAATTATAGTTTGAAAATATGAGGTTTTGTAAAACTTTCCATGTAATCTGAGTAAATGTAAAGTTTGCTTGTATTGGATAGTATTCAGTCTTAGTTAG ATGATCAAAGCCTTCGCATCTAATTCCATACTATCAGACGCAAAGAATAGATTGCGCATCTATACTTTCTTTGCTGCCTTATTACTTGGTGCTGGAGTTTATTTCATTGCAAATGAATTTATTACAAAGGGAAGTTTTAGATGGGAGGTTTTTTATTCTGCCCAAAATGTAAAATCGAGCACATGCAAGAATCAATGCAGGCCTCCTGGGAGCGAGTCTTTACCAGAAGGAATCATTAGTAAAACATCTAACTTTGAATTTCAGCCTCTTTGGGGCTCGTCTTTACAAAATAAAAAGCCGAAGGTTTCCAAGAACTTATTAGCAATTGCTGTTGGAATCAAACAGAGACATGTAGTGTCAAAAATTATTGAAAAGTTCCCTCAAGATGATTTCGACGTGATTCTTTTTCATTACGATGGTGTTGTGGATGAATGGAGGGAATTTGCATGGTATTCTCGTGCACTACATGTCTCTGCAATAAATCAAACAAAATGGTGGTTTGCCAAGCGTTTCTTGCATCCAGATATAGTTGCTGAATATAATTATATATTTCTTTGGGATGAGGATCTTGGCGTTGATTATTTTGACCCAAAACGATATATATCAATCCTCAAGGAGGAGGGGCTTGAGATATCACAACCAGCTCTCGATCCTGTTAAGTCCAAGGTGCACCAGCCGCTTACTGCACGCAAAACAGGATCGAAAGTTCACAGAAGGTTTTATAACTTCAAAGGCACTGGACGGTGCTATGCTAATAGCACAGGTCCTCCATGCACAGGATGGGTTGAAATGATGGCTCCTGTGTTCTCAAGGGCAGGATGGAGATGCACATGGTATATGATTCAGAATGACTTGATCCATGCATGGGGATTAGATAGACAGCTTGGCTACTGTGCACAAGGTGACCGAACAAAAAAAGTTGGTGTCGTTGATGCAGAATACATAGTACATTTAGGACTGCCAACGCTTGGTGCTTCCCATGATAACGCGCTGAATTCCGATGCTGCGTTGAAGAAAGACTCATCAAACTTAGATAGATCGGAACCCCAAGTGAATAATAGAGTCAAAGTGAGGATGCAATCTTCCTTAGAAATGCAGATTTTCAAGGATCGATGGACTGATGCAGCAAAGAATGACAGATGTTGGATCGACCCTTATCCGTAA ATGATCAAAGCCTTCGCATCTAATTCCATACTATCAGACGCAAAGAATAGATTGCGCATCTATACTTTCTTTGCTGCCTTATTACTTGGTGCTGGAGTTTATTTCATTGCAAATGAATTTATTACAAAGGGAAGTTTTAGATGGGAGGTTTTTTATTCTGCCCAAAATGTAAAATCGAGCACATGCAAGAATCAATGCAGGCCTCCTGGGAGCGAGTCTTTACCAGAAGGAATCATTAGTAAAACATCTAACTTTGAATTTCAGCCTCTTTGGGGCTCGTCTTTACAAAATAAAAAGCCGAAGGTTTCCAAGAACTTATTAGCAATTGCTGTTGGAATCAAACAGAGACATGTAGTGTCAAAAATTATTGAAAAGTTCCCTCAAGATGATTTCGACGTGATTCTTTTTCATTACGATGGTGTTGTGGATGAATGGAGGGAATTTGCATGGTATTCTCGTGCACTACATGTCTCTGCAATAAATCAAACAAAATGGTGGTTTGCCAAGCGTTTCTTGCATCCAGATATAGTTGCTGAATATAATTATATATTTCTTTGGGATGAGGATCTTGGCGTTGATTATTTTGACCCAAAACGATATATATCAATCCTCAAGGAGGAGGGGCTTGAGATATCACAACCAGCTCTCGATCCTGTTAAGTCCAAGGTGCACCAGCCGCTTACTGCACGCAAAACAGGATCGAAAGTTCACAGAAGGTTTTATAACTTCAAAGGCACTGGACGGTGCTATGCTAATAGCACAGGTCCTCCATGCACAGGATGGGTTGAAATGATGGCTCCTGTGTTCTCAAGGGCAGGATGGAGATGCACATGGTATATGATTCAGAATGACTTGATCCATGCATGGGGATTAGATAGACAGCTTGGCTACTGTGCACAAGGTGACCGAACAAAAAAAGTTGGTGTCGTTGATGCAGAATACATAGTACATTTAGGACTGCCAACGCTTGGTGCTTCCCATGATAACGCGCTGAATTCCGATGCTGCGTTGAAGAAAGACTCATCAAACTTAGATAGATCGGAACCCCAAGTGAATAATAGAGTCAAAGTGAGGATGCAATCTTCCTTAGAAATGCAGATTTTCAAGGATCGATGGACTGATGCAGCAAAGAATGACAGATGTTGGATCGACCCTTATCCGTAA
BLAST of CSPI05G00180.1 vs. TrEMBL
Match: A0A0A0KMF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G003110 PE=4 SV=1) HSP 1 Score: 804.7 bits (2077), Expect = 5.0e-230 Identity = 385/387 (99.48%), Postives = 386/387 (99.74%), Query Frame = 1
BLAST of CSPI05G00180.1 vs. TrEMBL
Match: A0A0D2TQU9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G170400 PE=4 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 3.7e-148 Identity = 250/396 (63.13%), Postives = 297/396 (75.00%), Query Frame = 1
BLAST of CSPI05G00180.1 vs. TrEMBL
Match: A0A0B0P2F7_GOSAR (GTPase Der OS=Gossypium arboreum GN=F383_01282 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 3.4e-146 Identity = 247/390 (63.33%), Postives = 295/390 (75.64%), Query Frame = 1
BLAST of CSPI05G00180.1 vs. TrEMBL
Match: A0A061E3W2_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_006097 PE=4 SV=1) HSP 1 Score: 515.4 bits (1326), Expect = 6.1e-143 Identity = 247/396 (62.37%), Postives = 294/396 (74.24%), Query Frame = 1
BLAST of CSPI05G00180.1 vs. TrEMBL
Match: A0A061DVY3_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_006097 PE=4 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 2.2e-140 Identity = 247/407 (60.69%), Postives = 294/407 (72.24%), Query Frame = 1
BLAST of CSPI05G00180.1 vs. TAIR10
Match: AT4G18530.1 (AT4G18530.1 Protein of unknown function (DUF707)) HSP 1 Score: 468.0 bits (1203), Expect = 5.6e-132 Identity = 226/386 (58.55%), Postives = 282/386 (73.06%), Query Frame = 1
BLAST of CSPI05G00180.1 vs. TAIR10
Match: AT4G12840.1 (AT4G12840.1 Protein of unknown function (DUF707)) HSP 1 Score: 447.6 bits (1150), Expect = 7.9e-126 Identity = 217/388 (55.93%), Postives = 274/388 (70.62%), Query Frame = 1
BLAST of CSPI05G00180.1 vs. TAIR10
Match: AT1G11170.1 (AT1G11170.1 Protein of unknown function (DUF707)) HSP 1 Score: 347.8 bits (891), Expect = 8.5e-96 Identity = 162/316 (51.27%), Postives = 222/316 (70.25%), Query Frame = 1
BLAST of CSPI05G00180.1 vs. TAIR10
Match: AT1G61240.1 (AT1G61240.1 Protein of unknown function (DUF707)) HSP 1 Score: 346.7 bits (888), Expect = 1.9e-95 Identity = 163/316 (51.58%), Postives = 224/316 (70.89%), Query Frame = 1
BLAST of CSPI05G00180.1 vs. TAIR10
Match: AT3G27470.1 (AT3G27470.1 Protein of unknown function (DUF707)) HSP 1 Score: 263.1 bits (671), Expect = 2.8e-70 Identity = 135/310 (43.55%), Postives = 191/310 (61.61%), Query Frame = 1
BLAST of CSPI05G00180.1 vs. NCBI nr
Match: gi|700194390|gb|KGN49567.1| (hypothetical protein Csa_5G003110 [Cucumis sativus]) HSP 1 Score: 804.7 bits (2077), Expect = 7.2e-230 Identity = 385/387 (99.48%), Postives = 386/387 (99.74%), Query Frame = 1
BLAST of CSPI05G00180.1 vs. NCBI nr
Match: gi|778697958|ref|XP_011654448.1| (PREDICTED: uncharacterized protein LOC101205845, partial [Cucumis sativus]) HSP 1 Score: 792.7 bits (2046), Expect = 2.8e-226 Identity = 380/386 (98.45%), Postives = 381/386 (98.70%), Query Frame = 1
BLAST of CSPI05G00180.1 vs. NCBI nr
Match: gi|659129555|ref|XP_008464732.1| (PREDICTED: uncharacterized protein LOC103502548, partial [Cucumis melo]) HSP 1 Score: 739.6 bits (1908), Expect = 2.8e-210 Identity = 357/408 (87.50%), Postives = 370/408 (90.69%), Query Frame = 1
BLAST of CSPI05G00180.1 vs. NCBI nr
Match: gi|823254471|ref|XP_012459876.1| (PREDICTED: uncharacterized protein LOC105780223 [Gossypium raimondii]) HSP 1 Score: 532.7 bits (1371), Expect = 5.3e-148 Identity = 250/396 (63.13%), Postives = 297/396 (75.00%), Query Frame = 1
BLAST of CSPI05G00180.1 vs. NCBI nr
Match: gi|728838841|gb|KHG18284.1| (GTPase Der [Gossypium arboreum]) HSP 1 Score: 526.2 bits (1354), Expect = 4.9e-146 Identity = 247/390 (63.33%), Postives = 295/390 (75.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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