CSPI04G21060.3 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGTTTTTCTTCTCTCTCTTGTTTTAGCAAGTTATCATTTCGCTTTTATTATGCTATTTAGTACTGTCTTGCTTTTCTCTTGAATTTATCATTCCACCATTCCCCTTCACGTTCGTTGGAATATCATCATAATTGCACTTGCTTTACTCATTTGTTGTGTTTTCCTTCACACATGTCTCCGTAGATTCTGGAACTTCTGCTTATAATTCAAAGGGGTTATATTTTATGTGGGAGATTTTTGTCTCGACCTTTATCACCTTGGTGTAGGATTTTCATATTTGTTAAACGTCTTAACCATGTGAGAGCACTGCAAAATAGTTTCAGTTTCAGTTGATTTTGGAACTTGGCTCTGCCCCATAGGGGTTTCTGGTCTCACACTGTGCTTTTTGGCGTTTGAAGGTCGACATGGAGAGTGATAATGGAGATATGAAGACCAGGATGGAAGACTATGAAGTTATTGAGCAGATTGGGAGGGGGGCATTTGGATCGGCTTTTCTTGTGTATCACAAGACTGAGAAGAAGAAGTAAGAAATATTTTTGAACTTCTGTTATTTCAGCAACTGCTTCTAAGTCCTTCAAATGAAAACCCTGATGTTCACACTTCCTTGTAATTATTGTGAGAAATGCTGATGCTTAGCTGTGTATTAAGTTGAGATCTATGGTTAGTTTTTTGTTCTTCTCAGTTGCTAATGGAACCCTAATCTTCATAACTAAAATGGCCCATTCAAGATTTATACCTTTTTTTTTCTGAGTGTAGAAGTGAAACAATTTTTTGGTCTTGTGGCATCACAAAATTGTTCGGCTTATTTTAGTGCTTCTCTCAATATTTACGTTCTTCCTAAATAGATATGTACTCAAGAAAATGATCATGGTTAGTTTTCTATTGTTCTCTGTTGCTAATGGAACCCCAATCGTCATAACTAAAATGGCCCATTCAAGATTTATACCTTTTTTTCTGAGTGTAGAAATGAAAAAGATTTTTGCTCTTTTGGCATCACACAATTGTTCGGCTTATTTTAGTGCTTCTCTCAATATTACCTTCTTTCTGAATAGATATGTACTCAAGAAAATTCGCTTGGCAAAGCAAACAGAGAAGTTCAAGCGCACTGCCCACCAAGAGGTTAAGTTTATTTAGAACCTATATCAACTATTTAACTGTTTGAAATACTGCTCATTATTCTCAAGATCTGATTTAATTGACTCTGTTCTGTCTTTACAATTTGTCAACTACAAATGAATTGCTAGTTAACAGGGGGTAAATAAATAGCTATTAACTTAGGAAATGTTTAATGTCTGCCTCACGTTCAACGATAATGCTTAATGATACAAAACAGATCACATAGAAATTGGAGAAAATATAAAGAATTTTATGTTGGCAAATGTGGGAAGGGTAAATTATGGAAGATTGAGTGTTTTCTTGATTCTATGATACGACTCCATATGTTCTTTATTATGAAATGAATTGAGCCATTGTGTACTTCTTCAGTACTTTTTACTTCTCTAGAACAGTCTAACCAGGTGACTTGAAAGTTTTGTGGAAAATTAGTGACTTCTTTATTTTTTCCTGAATTTAGTAGATAATAGGTTTTTAAAAGGAATTTGCTTTAAAATAAAATGCATTCAAAGTTTGTAGACATGGCAAACTCTTAAATCATCAATTCAACCAAAAGCTTAAGCGGGTGGTTGAAGGCAAATTTCATTATATATCACAACACTCCCCCTCACTTGTGGGCTTGAAATATTTGAAACGCCCAACAAGTGAAAATCAATTTTAATTGGGGAGGAAACAACAATTAGGACCTTTTGGACCACCTGCATTGGTACCAGCTCATATTACCAATTCAACCAAAAGCTTAAACTAATGGTTGAAGGCAAAATTAATTATATATAACTAACACAAACTATCTCACTAATCTTGATTTACAACTAAGAAGATACCTTAGTTTGGTACAATGGTTAAAGGGGCAAGTTGAACACCTAGACGCTGAGGTCATTTTTCTAACTATGGTGCTCTGGATGGCATATGTTGTTGGGTTAAGGGGTTCTCCTAAATGATAAGTCAAGTGTGCTTAGGCGGGTTCAGACGCCCAAAAAAATGGACATTTTGTTTTCATCCTCAGTGTGAACTTGGCATGTTTTCTCTTCAAAATTTAACTTAACGTAGTTGATGAGTAAATATCCTTGATATTCACAGTATGTTTCGTTACTGATGTGACCTTGTCAATTACAGATGAATTTGATTGCAAAACTAAATAACCCATATATTGTGGACTACAAAGATTCATGGGTGGATAAGGTAAATTTTGTTCTTTCCCCTCCTATTCAGATCTGGATTGAATCTGTTTCTTTTACAATAAGAACTCTTGCTTTTAGAATTTGGAAGTAGAGGTTGGTTTTTGTTTTCTCAGTTCTTATGTGGATTTTTCTTTTTCGAGCCTACCTTGTGTTGTGTATAATCTTGATCCTTCATGCTGAAAGATTGTAGTTTAAGATATTTTAGATTGTTGGGTCAATATTGCTTTGGATAAGACACAATTTCATTGATGAATGGAATATTAAATGAGTTCTGTTAAAAAGAGATTATTTAATACAAAAGTTGAATCAATACTGTTAAAAAGGATTATTTAATACAAAAGGGGTGATTGTGACTACTTTCTTTCTTTGGAAGGAAATGAATTGTTTATTTCTGAGTGACTCAAAGAGAAAAGTGGATTCTCAATTTGAGAGGGTGTTCGCAATCGACTATAAATATATGGTCTATAGATCATAGCTAAAGCTATGGTGATTCTTTGTATTCTCATTTTCACTCACGTTTCATATTTTGGGCATTCTGTTTTGTAGGGTGATTGTATATGCATTGTAACTGGCTACTGTGAAGGAGGAGACATGTAAGTGTCTAAGTGATAGGTATTTAATACCATTTAGAGTTTTCTTTATTTACAACCTTTACAGAGTAGTTTATTTTTTGGTTCAGGTCATGATTAAATTTTAGATTGAATGAATAATCTGCAACCTTTTTAACAATGTTTATTGATTCCCCAGCTCTAAAGAAACAGAACTAATTGAAGAATACATGTTGTCTTGAATTAATAAGAGAACAAACGTTAGGTGGTCCACTGCTAGTCATGCGTTCAATTTATTTTGCTTTCTCAGGATCCTTCATTTCTAATTTCTAAATGTCCTCCACTACCATCCTCTTTCTTCCTTCTCTGATGTGTATATCTGACCAGGTTAAAAATCTGATTGAAAACCCCTTCCATTGATATAAATAAAAAAGGATTTGGCTAAAAAATTCTCCCTCACCTTCTTTCCTTCCCTCATTTTAATCTCTCCCTTCGAGATTTCATCTTCTATTAATGTCATTGACAGCATGAATCTAAGTGATGAAGATTAGGTATCCGAAGAAGAGATTGGTGAATGATAATAAAAGATCCTTCCAGGTGGCAAAGATTAAAAAAACAAAGCATGAAATTCTTTGGTGACAAAAAGTCAACATTAGTCTTATTTCACGACATATTATTGTAGAAATATATGAGTCGATATGAGTGTTTTCTGCTGTAGAGAAAGAGAGAAAGGGATGAAAAGAAAAATCAAAACTAATGGTACGCCTTGTTTTCTTTTGTTGAACAGGTCTGAACTGATCAAAAAGGCCAGAGGAACATATTTTCCGGAGGAAGTAAGTCGATTTCAGTGTTAATTATTCTTTTCCTACCAAACCTATGTCTGATTGCCATTTCGTTCTCTCAGAAACTTTGCAAGTGGTTGGCACAGTTGTTGCTAGCTGTGGACTATCTGCACTCCAATCGAGTACTACATAGAGATCTTAAGGTATTTAATTAGTATTAAGTATTAACCTACACAATATTGCAATTAAAAACTCATTAATGATACTGATCTGTTTTTTATTTTCAAATTTTCTTCAATTACAGTGTTCCAACATTTTCCTTACAAAGGGCAATGATATCCGGCTTGGTATGATGTCTTCCAATTTAACTTGGATGGGATTTCTTTTCCTAGTCATTTCTTCTAGAAAAGTGCTAATATCTAGGATGTCTGTACAGGGGACTTCGGACTTGCAAAACTGCTGAATACAGAAGACCTTGCTTCATCGGTAAGATGCAATCATTGTCTGTGGTAATTTTGTTATAGCAAGCTTTTGAATCAACAAATTTATATTTTATTGTAATAAAACCTGGTAAGGTCAAGGCCATGGAATGCTTAACTTCTGCCACGTAAACTATGATCCGGAGGTTTTAAAATGGTTGTTTATTTACCTTTGAATTCATGTCAGTAACTTCTTCATTAGGTTTTATTCCACGCAATTTCTTTTATGTTGCCAATATTCATGGTATTGTGCTTTCTTTCCTTGAGAATGTCGAGCATTGAGAACACATGGTTGAGGTTCCCTTCCCTCTGTTTCTCCCTTGGCACATTCACACCACTGGATCAATTGATCCCACCAAGCCCACAATTTTGGCCACATAACTACAAACTGCCAAAAAAAAATTCCTTGAAAATTATGCATTGTGCCATCATAGATGTCGTGTCGGGATAAAATAGTAATGAGTAGCTCAATATTGTTGGGAGAGATCTGGATCACTTAGATGTCTAAACTATAATTCTTTCACCTATCTATTAATGGGTATATTTTAGGTAAGGTTCTATCAATGAATACTGGTAGAATTAGTGGGCTTTGGTCCAAGGAAAGATTTACCCTAATTTTCTTTCCTTTTTTATCATAAGCTTGTTGTCTATTTATTTTCCCCCTCGTATTTTTTTGTTAATATGAGGAAATAATAAGAAAGTCAGATCATGGTTTTTCTCTCGATACTCGGATTTTCATGTAACTCAGTGTCTATTTTCTTTTACTGCTTCTAATATGGTATTAGAGCTAGGTAAAGATGAAACCTTAGACATCAACCTTGATGAAACCCAAATTGTTCACAAGACAGTCACCGGGATCAATGTCGCTGCTGCTGCCGCTATGGAAAAATTACTCCAATAACTTCAGACGCCGCCAATGAGCAATTCTGTCTCACCCTCGGAGCCATCTGTGCCGCCGAGTGGAAGAAACCAGCTGCGTGCGCCCAGCCTGTCCACCCACG ATGGAGAGTGATAATGGAGATATGAAGACCAGGATGGAAGACTATGAAGTTATTGAGCAGATTGGGAGGGGGGCATTTGGATCGGCTTTTCTTGTGTATCACAAGACTGAGAAGAAGAAATATGTACTCAAGAAAATTCGCTTGGCAAAGCAAACAGAGAAGTTCAAGCGCACTGCCCACCAAGAGATGAATTTGATTGCAAAACTAAATAACCCATATATTGTGGACTACAAAGATTCATGGGTGGATAAGGGTGATTGTATATGCATTGTAACTGGCTACTGTGAAGGAGGAGACATGTCTGAACTGATCAAAAAGGCCAGAGGAACATATTTTCCGGAGGAAAAACTTTGCAAGTGGTTGGCACAGTTGTTGCTAGCTGTGGACTATCTGCACTCCAATCGAGTACTACATAGAGATCTTAAGTGTTCCAACATTTTCCTTACAAAGGGCAATGATATCCGGCTTGGGGACTTCGGACTTGCAAAACTGCTGAATACAGAAGACCTTGCTTCATCGTGTCTATTTTCTTTTACTGCTTCTAATATGGTATTAGAGCTAGGTAAAGATGAAACCTTAGACATCAACCTTGATGAAACCCAAATTGTTCACAAGACAGTCACCGGGATCAATGTCGCTGCTGCTGCCGCTATGGAAAAATTACTCCAATAA ATGGAGAGTGATAATGGAGATATGAAGACCAGGATGGAAGACTATGAAGTTATTGAGCAGATTGGGAGGGGGGCATTTGGATCGGCTTTTCTTGTGTATCACAAGACTGAGAAGAAGAAATATGTACTCAAGAAAATTCGCTTGGCAAAGCAAACAGAGAAGTTCAAGCGCACTGCCCACCAAGAGATGAATTTGATTGCAAAACTAAATAACCCATATATTGTGGACTACAAAGATTCATGGGTGGATAAGGGTGATTGTATATGCATTGTAACTGGCTACTGTGAAGGAGGAGACATGTCTGAACTGATCAAAAAGGCCAGAGGAACATATTTTCCGGAGGAAAAACTTTGCAAGTGGTTGGCACAGTTGTTGCTAGCTGTGGACTATCTGCACTCCAATCGAGTACTACATAGAGATCTTAAGTGTTCCAACATTTTCCTTACAAAGGGCAATGATATCCGGCTTGGGGACTTCGGACTTGCAAAACTGCTGAATACAGAAGACCTTGCTTCATCGTGTCTATTTTCTTTTACTGCTTCTAATATGGTATTAGAGCTAGGTAAAGATGAAACCTTAGACATCAACCTTGATGAAACCCAAATTGTTCACAAGACAGTCACCGGGATCAATGTCGCTGCTGCTGCCGCTATGGAAAAATTACTCCAATAA
BLAST of CSPI04G21060.3 vs. Swiss-Prot
Match: NEK5_ORYSJ (Serine/threonine-protein kinase Nek5 OS=Oryza sativa subsp. japonica GN=NEK5 PE=3 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 7.4e-70 Identity = 126/166 (75.90%), Postives = 146/166 (87.95%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. Swiss-Prot
Match: NEK5_ARATH (Serine/threonine-protein kinase Nek5 OS=Arabidopsis thaliana GN=NEK5 PE=1 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 1.7e-69 Identity = 120/166 (72.29%), Postives = 148/166 (89.16%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. Swiss-Prot
Match: NEK6_ARATH (Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana GN=NEK6 PE=3 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 8.2e-69 Identity = 122/162 (75.31%), Postives = 147/162 (90.74%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. Swiss-Prot
Match: NEK4_ORYSJ (Serine/threonine-protein kinase Nek4 OS=Oryza sativa subsp. japonica GN=NEK4 PE=2 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.4e-68 Identity = 121/166 (72.89%), Postives = 145/166 (87.35%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. Swiss-Prot
Match: NEK2_ORYSI (Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. indica GN=NEK2 PE=3 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.3e-66 Identity = 122/179 (68.16%), Postives = 148/179 (82.68%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. TrEMBL
Match: A0A0A0L1F2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G572290 PE=3 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 3.6e-95 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. TrEMBL
Match: B9II46_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s05240g PE=3 SV=2) HSP 1 Score: 328.2 bits (840), Expect = 8.0e-87 Identity = 156/173 (90.17%), Postives = 168/173 (97.11%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. TrEMBL
Match: M5VWL0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002660mg PE=3 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 1.8e-86 Identity = 153/173 (88.44%), Postives = 168/173 (97.11%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. TrEMBL
Match: U5GBL3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s05500g PE=3 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 3.9e-86 Identity = 157/177 (88.70%), Postives = 169/177 (95.48%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. TrEMBL
Match: A0A061EX49_THECC (NIMA-related kinase 7 isoform 1 OS=Theobroma cacao GN=TCM_024816 PE=3 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 2.6e-85 Identity = 155/173 (89.60%), Postives = 166/173 (95.95%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. TAIR10
Match: AT3G44200.1 (AT3G44200.1 NIMA (never in mitosis, gene A)-related 6) HSP 1 Score: 263.8 bits (673), Expect = 9.3e-71 Identity = 120/166 (72.29%), Postives = 148/166 (89.16%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. TAIR10
Match: AT3G20860.1 (AT3G20860.1 NIMA-related kinase 5) HSP 1 Score: 262.7 bits (670), Expect = 2.1e-70 Identity = 123/173 (71.10%), Postives = 152/173 (87.86%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. TAIR10
Match: AT3G04810.1 (AT3G04810.1 NIMA-related kinase 2) HSP 1 Score: 250.0 bits (637), Expect = 1.4e-66 Identity = 120/179 (67.04%), Postives = 149/179 (83.24%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. TAIR10
Match: AT3G63280.1 (AT3G63280.1 NIMA-related kinase 4) HSP 1 Score: 248.8 bits (634), Expect = 3.1e-66 Identity = 118/179 (65.92%), Postives = 149/179 (83.24%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. TAIR10
Match: AT5G28290.1 (AT5G28290.1 NIMA-related kinase 3) HSP 1 Score: 247.7 bits (631), Expect = 6.9e-66 Identity = 121/179 (67.60%), Postives = 147/179 (82.12%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. NCBI nr
Match: gi|778695164|ref|XP_011653938.1| (PREDICTED: serine/threonine-protein kinase Nek6 [Cucumis sativus]) HSP 1 Score: 355.9 bits (912), Expect = 5.1e-95 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. NCBI nr
Match: gi|700199726|gb|KGN54884.1| (hypothetical protein Csa_4G572290 [Cucumis sativus]) HSP 1 Score: 355.9 bits (912), Expect = 5.1e-95 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. NCBI nr
Match: gi|659083266|ref|XP_008442256.1| (PREDICTED: serine/threonine-protein kinase Nek6 isoform X2 [Cucumis melo]) HSP 1 Score: 355.9 bits (912), Expect = 5.1e-95 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. NCBI nr
Match: gi|659083264|ref|XP_008442255.1| (PREDICTED: serine/threonine-protein kinase Nek6 isoform X1 [Cucumis melo]) HSP 1 Score: 355.9 bits (912), Expect = 5.1e-95 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1
BLAST of CSPI04G21060.3 vs. NCBI nr
Match: gi|743869460|ref|XP_011033286.1| (PREDICTED: serine/threonine-protein kinase Nek6-like isoform X1 [Populus euphratica]) HSP 1 Score: 328.6 bits (841), Expect = 8.7e-87 Identity = 157/173 (90.75%), Postives = 168/173 (97.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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