CSPI04G18960.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G18960.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Two-component response regulator
Location	Chr4 : 16493380 .. 16494285 (-)
Sequence length	906

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGAAGAACACTCGAATTGGTTTTCTAGATGGGAAGACGAGCTCCCATCTCCAGATGAATTGATGCCTCTTTCTCAAACCCTAATAACCCCCGATCTAGCTTTGGCTTTTGATATTCAGAATCCCAGCAATAGCAGTCCGCCGTTGCCTTGTCCGTCTCCGCCGCTTTCAAATCCTCTCCCTGGTTCCGGCAACGGAATTGTGCCGCCAAACTCCGCGGATTTCGGCGATTCTGCCGATTTGGGCTCCGGAGCCGCCAGCGACGAGCCGGCTCGGACTCTCAAGCGGCCGCGCCTTGTTTGGACGCCTCAACTTCACAAGCGATTTGTTGATGCTGTTGCTCATTTGGGTATAAAAAATGCTGTCCCCAAGACCATAATGCAGCTCATGAGTGTCGATGGGTTGACTAGAGAGAACGTAGCTAGCCATTTGCAGAAGTACCGCCTCTATCTCAAGCGAATGCAGGGCTTGTCCGGTGGCGGCGGCGGCGGAGGTGCTGCCTTGGTTGGTTCATCCGATCCCGCTACTGACCATTTGTTTGCTAGCTCACCAGTTCCACCCCATTTGCTTCACTCTGCTCGCACCAGTTCAGACCATTTCTTGCCCTATGTTCCCATGGCCACTCTGCAGCAACACCACCATCACCAGCAGCAGATGGCTGCTGCTGCTGCTGTCGCCGGCCATACACAGCCCCCCCCGCCGTATCATCGGCAGGTTGGACATTTTGGGTCGTCGCCAAATGGTCAGTTCGAGCACCCATTTTTAGCTAGACAGTCCCAGCCTATCCATAGAATGGGAACACCAGTGCATAATTCTGTTCCCAATTACATTGAAGATTTGGAATCAGCCAATGCCACTGGAGGACGAAAAGTCCTCACCTTATTTCCTACTGGGGATGATTGA

mRNA sequence

ATGAGAGAAGAACACTCGAATTGGTTTTCTAGATGGGAAGACGAGCTCCCATCTCCAGATGAATTGATGCCTCTTTCTCAAACCCTAATAACCCCCGATCTAGCTTTGGCTTTTGATATTCAGAATCCCAGCAATAGCAGTCCGCCGTTGCCTTGTCCGTCTCCGCCGCTTTCAAATCCTCTCCCTGGTTCCGGCAACGGAATTGTGCCGCCAAACTCCGCGGATTTCGGCGATTCTGCCGATTTGGGCTCCGGAGCCGCCAGCGACGAGCCGGCTCGGACTCTCAAGCGGCCGCGCCTTGTTTGGACGCCTCAACTTCACAAGCGATTTGTTGATGCTGTTGCTCATTTGGGTATAAAAAATGCTGTCCCCAAGACCATAATGCAGCTCATGAGTGTCGATGGGTTGACTAGAGAGAACGTAGCTAGCCATTTGCAGAAGTACCGCCTCTATCTCAAGCGAATGCAGGGCTTGTCCGGTGGCGGCGGCGGCGGAGGTGCTGCCTTGGTTGGTTCATCCGATCCCGCTACTGACCATTTGTTTGCTAGCTCACCAGTTCCACCCCATTTGCTTCACTCTGCTCGCACCAGTTCAGACCATTTCTTGCCCTATGTTCCCATGGCCACTCTGCAGCAACACCACCATCACCAGCAGCAGATGGCTGCTGCTGCTGCTGTCGCCGGCCATACACAGCCCCCCCCGCCGTATCATCGGCAGGTTGGACATTTTGGGTCGTCGCCAAATGGTCAGTTCGAGCACCCATTTTTAGCTAGACAGTCCCAGCCTATCCATAGAATGGGAACACCAGTGCATAATTCTGTTCCCAATTACATTGAAGATTTGGAATCAGCCAATGCCACTGGAGGACGAAAAGTCCTCACCTTATTTCCTACTGGGGATGATTGA

Coding sequence (CDS)

ATGAGAGAAGAACACTCGAATTGGTTTTCTAGATGGGAAGACGAGCTCCCATCTCCAGATGAATTGATGCCTCTTTCTCAAACCCTAATAACCCCCGATCTAGCTTTGGCTTTTGATATTCAGAATCCCAGCAATAGCAGTCCGCCGTTGCCTTGTCCGTCTCCGCCGCTTTCAAATCCTCTCCCTGGTTCCGGCAACGGAATTGTGCCGCCAAACTCCGCGGATTTCGGCGATTCTGCCGATTTGGGCTCCGGAGCCGCCAGCGACGAGCCGGCTCGGACTCTCAAGCGGCCGCGCCTTGTTTGGACGCCTCAACTTCACAAGCGATTTGTTGATGCTGTTGCTCATTTGGGTATAAAAAATGCTGTCCCCAAGACCATAATGCAGCTCATGAGTGTCGATGGGTTGACTAGAGAGAACGTAGCTAGCCATTTGCAGAAGTACCGCCTCTATCTCAAGCGAATGCAGGGCTTGTCCGGTGGCGGCGGCGGCGGAGGTGCTGCCTTGGTTGGTTCATCCGATCCCGCTACTGACCATTTGTTTGCTAGCTCACCAGTTCCACCCCATTTGCTTCACTCTGCTCGCACCAGTTCAGACCATTTCTTGCCCTATGTTCCCATGGCCACTCTGCAGCAACACCACCATCACCAGCAGCAGATGGCTGCTGCTGCTGCTGTCGCCGGCCATACACAGCCCCCCCCGCCGTATCATCGGCAGGTTGGACATTTTGGGTCGTCGCCAAATGGTCAGTTCGAGCACCCATTTTTAGCTAGACAGTCCCAGCCTATCCATAGAATGGGAACACCAGTGCATAATTCTGTTCCCAATTACATTGAAGATTTGGAATCAGCCAATGCCACTGGAGGACGAAAAGTCCTCACCTTATTTCCTACTGGGGATGATTGA

Homology

[Close]

BLAST of CSPI04G18960.1 vs. Swiss-Prot
Match: PCL1_ORYSJ (Transcription factor PCL1 OS=Oryza sativa subsp. japonica GN=PCL1 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-36
Identity = 110/235 (46.81%), Postives = 132/235 (56.17%), Query Frame = 1


Query: 12  WEDELPSPDELMPLSQTLITPDLALAF-----------DIQNPSNSSPP-LPCPSPPLSN 71
           WE  LP  DEL PLSQ L+   LA AF           D+   S ++   L   S   S+
Sbjct: 22  WETGLPGADELTPLSQPLVPAGLAAAFRIPPEPGRTLLDVHRASAATVSRLRRASSSSSS 81

Query: 72  PLP-----GSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAV 131
             P     G+G G    + A+ G  AD G+G  ++  +   KR RLVWTPQLHKRFV+ V
Sbjct: 82  SFPAFASKGAGTGA---DEAESGGGADGGNGNTNNSSS---KRARLVWTPQLHKRFVEVV 141

Query: 132 AHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSD 191
           AHLG+KNAVPKTIMQLM+V+GLTRENVASHLQKYRLY+KRMQGLS  G            
Sbjct: 142 AHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNEG-----------P 201

Query: 192 PATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGH 230
             +DH+FAS+PVP   LH    S     PY P      HHH     A AA V+ +
Sbjct: 202 SPSDHIFASTPVPHASLHDQVPS-----PYHP----HPHHHSYNNAAYAATVSSY 230

[Close]

BLAST of CSPI04G18960.1 vs. Swiss-Prot
Match: PCL1_ARATH (Transcription factor LUX OS=Arabidopsis thaliana GN=LUX PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.5e-36
Identity = 120/301 (39.87%), Postives = 150/301 (49.83%), Query Frame = 1


Query: 10  SRWEDELPSPDELMPLSQTLITPDLALAF-----------DIQNPS-------------- 69
           S WE  LPS ++L  LS +LI P+LA+AF           D+   S              
Sbjct: 20  SEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGP 79

Query: 70  ----------------NSSPPLPCPSPPLSNPLPGSGNGIVPPNSADFGDSADLGSGAAS 129
                           +SSP         SN     G G+ P    D   +A+ G     
Sbjct: 80  NTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDP----DSAMAAEEGDSGTE 139

Query: 130 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 189
           D   +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKY
Sbjct: 140 DLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKY 199

Query: 190 RLYLKRMQGLSGGGGGGGAALVGSSDPATDHLFASSPVPPHL---LHSARTSSDHFLPYV 249
           RLYLKRMQGL+  G             A+D LF+S+PVPP     +     SS +    +
Sbjct: 200 RLYLKRMQGLTNEG-----------PSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPI 259

Query: 250 PMATLQQHHHHQQQMAAAAAVAGH---TQPPPPYHR-QVGHFGSSPNGQFE-HPFLARQS 262
           P A   Q        A    + G+        PYH+    H G+  NG FE +P++ +Q+
Sbjct: 260 PGAYGTQQMMQMPVYAHHMGMQGYHHQNHNHDPYHQNHRHHHGAGGNGAFESNPYMMQQN 305

[Close]

BLAST of CSPI04G18960.1 vs. Swiss-Prot
Match: PCLL_ARATH (Transcription factor BOA OS=Arabidopsis thaliana GN=BOA PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.5e-33
Identity = 106/268 (39.55%), Postives = 138/268 (51.49%), Query Frame = 1


Query: 12  WEDELPSPDELMPLSQTLITPDLALAF----------------------DIQNPSNSSPP 71
           WE  LP+ D+L PLSQ L+   LALAF                       +++ +N+S  
Sbjct: 29  WEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQITLSSLRSSTNASSV 88

Query: 72  LPCPSPPLSNPLPGSGNGIVPPNSADFGDSADL-------GSGAASDEPARTLKRPRLVW 131
           +      + + +PGS         +D G++A +       G     D   +T KRPRLVW
Sbjct: 89  MEEVVDRVESSVPGSDPK--KQKKSDGGEAAAVEDSTAEEGDSGPEDASGKTSKRPRLVW 148

Query: 132 TPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGG 191
           TPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKR+QGL+   
Sbjct: 149 TPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLT--- 208

Query: 192 GGGGAALVGSSDP--ATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQM 246
                      DP  ++D LF+S+PVPP        S+      VP+ ++     +  QM
Sbjct: 209 --------TEEDPYSSSDQLFSSTPVPPQSFQDGGGSNGKLGVPVPVPSMVPIPGYGNQM 268

[Close]

BLAST of CSPI04G18960.1 vs. Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 4.3e-20
Identity = 46/75 (61.33%), Postives = 61/75 (81.33%), Query Frame = 1


Query: 85  GAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH 144
           G   DE A  LK+PR+VW+ +LH++FV AV  LG++ AVPK I++LM+V GLTRENVASH
Sbjct: 225 GDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASH 284

Query: 145 LQKYRLYLKRMQGLS 160
           LQKYR+YL+R+ G+S
Sbjct: 285 LQKYRIYLRRLGGVS 299

[Close]

BLAST of CSPI04G18960.1 vs. Swiss-Prot
Match: ORR21_ORYSI (Two-component response regulator ORR21 OS=Oryza sativa subsp. indica GN=RR21 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-19
Identity = 79/228 (34.65%), Postives = 111/228 (48.68%), Query Frame = 1


Query: 78  DSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLT 137
           D  +L SG    +P+ T K+PR+VW+ +LH++FV+AV HLGI  AVPK I++LM+V GLT
Sbjct: 187 DDGELESG----DPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLT 246

Query: 138 RENVASHLQKYRLYLKRMQGLSGG--------GGGGGAALVGSSDPATDHLFASSPVPPH 197
           RENVASHLQK+RLYLKR+     G           G    +G  D     L AS  +PP 
Sbjct: 247 RENVASHLQKFRLYLKRIAQHHAGIANPFCPPASSGKVGSLGGLD--FQALAASGQIPPQ 306

Query: 198 LLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQPPPPYHRQVGHFGSSPNG 257
            L + +   D  L   P  +L      Q  +  AA                   G+ P+G
Sbjct: 307 ALAALQ---DELLGR-PTNSLVLPGRDQSSLRLAAVK-----------------GNKPHG 366

Query: 258 QFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFP 298
           + E  F     QPI++     + + P      +S+ A GG    + +P
Sbjct: 367 EREIAF----GQPIYKCQNNAYGAFP------QSSPAVGGMPSFSAWP 377

[Close]

BLAST of CSPI04G18960.1 vs. TrEMBL
Match: A0A0A0L0V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G425730 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 1.0e-169
Identity = 298/301 (99.00%), Postives = 298/301 (99.00%), Query Frame = 1


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQPPPPYHRQV 240
           FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQ  PPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSSPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGS PNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

Query: 301 D 302
           D
Sbjct: 301 D 301

[Close]

BLAST of CSPI04G18960.1 vs. TrEMBL
Match: F6HQP5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g00900 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 8.1e-127
Identity = 240/312 (76.92%), Postives = 259/312 (83.01%), Query Frame = 1


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSN-SSPPLPCPSPPLSN 60
           MREE SNWFSRWE+ELPSP+ELMPLSQTLITPDLALAFDI+NP++  +PP P P+P ++ 
Sbjct: 1   MREEESNWFSRWEEELPSPEELMPLSQTLITPDLALAFDIRNPNSPQAPPPPLPTPQVAP 60

Query: 61  PLPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGI 120
           P P        PNSA   DS DLGSGAA DEPARTLKRPRLVWTPQLHKRFVDAVAHLGI
Sbjct: 61  PPPSQ------PNSAPEFDSGDLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGI 120

Query: 121 KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS-------GGGGGGGAALVGS 180
           KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS       GGGG GG A + +
Sbjct: 121 KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGGGGGGAGGGAGLAA 180

Query: 181 SDPATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMA-AAAAVAGHTQ 240
           +DPATDHLFASSPVPPH LH  R SS+HFLP+VP+A LQQHHHH QQMA AAAAVA H Q
Sbjct: 181 ADPATDHLFASSPVPPHFLHPGRASSEHFLPFVPVAALQQHHHHHQQMAVAAAAVAAHPQ 240

Query: 241 PPPPY--HRQVGHFGSSPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGG 300
               Y  HRQVGHFGS PNGQFEHPFL RQSQP+HRMG PVH+ VP Y+EDLESA ATGG
Sbjct: 241 LQTQYHHHRQVGHFGSPPNGQFEHPFLPRQSQPVHRMGAPVHSPVPAYVEDLESATATGG 300

Query: 301 RKVLTLFPTGDD 302
           R+VLTLFPTGDD
Sbjct: 301 RRVLTLFPTGDD 306

[Close]

BLAST of CSPI04G18960.1 vs. TrEMBL
Match: A5AMU0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007446 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 6.9e-126
Identity = 239/312 (76.60%), Postives = 257/312 (82.37%), Query Frame = 1


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLP-CPSPPLSN 60
           MREE SNWFSRWE+ELPSP+ELMPLSQTLITPDLALAFDI+NP++   P P  P+P ++ 
Sbjct: 1   MREEESNWFSRWEEELPSPEELMPLSQTLITPDLALAFDIRNPNSPQAPTPPLPTPQVAP 60

Query: 61  PLPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGI 120
           P P        PNSA   DS DLGSGAA DEPARTLKRPRLVWTPQLHKRFVDAVAHLGI
Sbjct: 61  PPPSQ------PNSAPEFDSGDLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGI 120

Query: 121 KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS-------GGGGGGGAALVGS 180
           KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS       GGGG GG A + +
Sbjct: 121 KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGGGGGGAGGGAGLAA 180

Query: 181 SDPATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMA-AAAAVAGHTQ 240
           +DPATDHLFASSPVPPH LH  R SS+HFLP+VP+A LQQHHHH QQMA AAAAVA H Q
Sbjct: 181 ADPATDHLFASSPVPPHFLHPGRASSEHFLPFVPVAALQQHHHHHQQMAVAAAAVAAHPQ 240

Query: 241 PPPPY--HRQVGHFGSSPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGG 300
               Y  HRQVGHFGS PNGQFEHPFL RQSQP+HRMG PVH+ VP Y+EDLESA ATGG
Sbjct: 241 LQTQYHHHRQVGHFGSPPNGQFEHPFLPRQSQPVHRMGAPVHSPVPAYVEDLESATATGG 300

Query: 301 RKVLTLFPTGDD 302
           R+VLTLFPTGDD
Sbjct: 301 RRVLTLFPTGDD 306

[Close]

BLAST of CSPI04G18960.1 vs. TrEMBL
Match: A0A067JV01_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00067 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.2e-122
Identity = 240/324 (74.07%), Postives = 260/324 (80.25%), Query Frame = 1


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSS----------PPL 60
           MRE+ SNWFSRWE+ELPSP+ELMPLSQTLITPDLALAFDI+NP+N++          PP 
Sbjct: 1   MREDDSNWFSRWEEELPSPEELMPLSQTLITPDLALAFDIRNPTNTTVNNTSLQQNPPPP 60

Query: 61  PCPSPPLS---NPLPGSGNGIVPPNSADFG-DSADLGSGAASDEPARTLKRPRLVWTPQL 120
           P P PP S   +PLP S      PNSA++  DSADLGSGAA DEPARTLKRPRLVWTPQL
Sbjct: 61  PPPPPPTSTTPSPLPPS-----QPNSAEYAADSADLGSGAAGDEPARTLKRPRLVWTPQL 120

Query: 121 HKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGG- 180
           HKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GG GG 
Sbjct: 121 HKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGAGGV 180

Query: 181 -------GAALVGSSDPATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQ 240
                  GA L  + D AT+HLFASSPVPPH LH  R +SDHFLPYVP+A L QHHHHQQ
Sbjct: 181 NGTGAGAGAGLT-AGDAATEHLFASSPVPPHFLHPGRPNSDHFLPYVPVAAL-QHHHHQQ 240

Query: 241 QMAAAAAVAGHTQPPPPYHRQVGHFGSSPNGQFEHPFLARQS-QPIHRMGTPVHNSVPNY 300
           QMAAAAA   H Q    YHRQ+GHFGS  NGQFEHPFLARQ+ QP+HRMG PV N+VP Y
Sbjct: 241 QMAAAAAAVAHPQLQNQYHRQMGHFGSPQNGQFEHPFLARQAQQPVHRMGAPVQNTVPGY 300

Query: 301 IEDLESANATGGRKVLTLFPTGDD 302
           +EDLESAN +GGRKVLTLFPTGDD
Sbjct: 301 VEDLESANGSGGRKVLTLFPTGDD 317

[Close]

BLAST of CSPI04G18960.1 vs. TrEMBL
Match: B9P528_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s03240g PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 3.3e-120
Identity = 234/324 (72.22%), Postives = 253/324 (78.09%), Query Frame = 1


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSS------------P 60
           MRE+ SNWFSRWE+ELPS +ELMPLSQTLITPDLALAFDI NP+N++             
Sbjct: 1   MREDDSNWFSRWEEELPSLEELMPLSQTLITPDLALAFDITNPTNTTNTNNHNSSLHQNQ 60

Query: 61  PLPCPSPPLS--NPLPGSGNGIVPPNSADFG-DSADLGSGAASDEPARTLKRPRLVWTPQ 120
           PLP P PP +  +P P +      PNS DF  DS +LGSGA  DEPARTLKRPRLVWTPQ
Sbjct: 61  PLPPPPPPPAAVSPTPTNPLASPQPNSGDFATDSGELGSGAGGDEPARTLKRPRLVWTPQ 120

Query: 121 LHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGG-- 180
           LHKRFVDAVAHLGIKNAVPKTIMQLM+VDGLTRENVASHLQKYRLYLKRMQGLS GGG  
Sbjct: 121 LHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGP 180

Query: 181 -----GGGAALVGSSDPATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQ 240
                GGG  L G SD ATDHLFASSPVP H LH  R +SDHFLP+VP+A LQQ HHHQQ
Sbjct: 181 GNGAVGGGGGLTGGSDAATDHLFASSPVPAHFLHPGRPNSDHFLPFVPVAALQQ-HHHQQ 240

Query: 241 QMAAAAAVAGHTQPPPPYHRQVGHFGSSPNGQFEHPFLARQS-QPIHRMGTPVHNSVPNY 300
           QMAAAAA  GH Q    YHR +GHFGS  NGQFEHPFLARQ+ QP+HRMG PVHN+VP Y
Sbjct: 241 QMAAAAAAVGHPQLQGQYHRPMGHFGSPTNGQFEHPFLARQTQQPVHRMGAPVHNAVPGY 300

Query: 301 IEDLESANATGGRKVLTLFPTGDD 302
           +EDLESAN   GRKVLTLFPTGDD
Sbjct: 301 VEDLESANGNEGRKVLTLFPTGDD 323

[Close]

BLAST of CSPI04G18960.1 vs. TAIR10
Match: AT3G10760.1 (AT3G10760.1 Homeodomain-like superfamily protein)

HSP 1 Score: 352.4 bits (903), Expect = 2.7e-97
Identity = 218/350 (62.29%), Postives = 239/350 (68.29%), Query Frame = 1


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPS----NSSPP------L 60
           MRE+ S+WF+RWE+ELPSP+ELMP+SQ+LI+PDLALAFDI+ P+    NS+ P       
Sbjct: 1   MREDDSDWFARWEEELPSPEELMPISQSLISPDLALAFDIRTPNHGNGNSNQPHHHHHHQ 60

Query: 61  PCPSPPLSNPLPGSGNGIVPPNSADFG-DSADLGSG-AASDEPARTLKRPRLVWTPQLHK 120
             P  P    LP S       +SA+F  DSADLGSG AA DEPARTLKRPRLVWTPQLHK
Sbjct: 61  TTPPTPSQLQLPSSQAN----SSAEFAADSADLGSGGAAGDEPARTLKRPRLVWTPQLHK 120

Query: 121 RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAA 180
           RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GGG G   
Sbjct: 121 RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGAG--- 180

Query: 181 LVGSSDPATDHLFASSPVPPHLLHSART-SSDHFLP-YVPMATLQQHHHHQQQMAAAAAV 240
               SDPATD LFASSPVP H LH  R  SSDHF+P +VP+ATLQQ    QQQMAAAAA 
Sbjct: 181 ----SDPATDRLFASSPVPAHFLHPNRVPSSDHFMPSFVPIATLQQ----QQQMAAAAAA 240

Query: 241 AGHTQP---PPPYHRQV--GHFGSSPNGQFEHP--------------------------F 300
           A    P   PP +HRQ+   HFGS  NG F  P                          F
Sbjct: 241 AAAANPHLQPPQFHRQIAAAHFGSPTNGGFSSPTSNGQFGSPTSNGFGSPTTNGKFDPSF 300

Query: 301 LA---RQSQPIHRMGTP-VHNSVPNYIEDLESANATGGRKVLTLFPTGDD 302
           LA    Q QPI RM TP +H+ V NY+EDLESANA GGR VLTLFPT DD
Sbjct: 301 LAVRQTQQQPIQRMSTPSLHSPVSNYVEDLESANANGGRTVLTLFPTRDD 335

[Close]

BLAST of CSPI04G18960.1 vs. TAIR10
Match: AT5G05090.1 (AT5G05090.1 Homeodomain-like superfamily protein)

HSP 1 Score: 287.0 bits (733), Expect = 1.4e-77
Identity = 180/313 (57.51%), Postives = 213/313 (68.05%), Query Frame = 1


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQ--NPSNSSPPLPCPSPPLS 60
           MREE SNWF++WE+ELPSP+EL+PLSQ+LITPDLA+AFD+   N SNS  PLP  +PP  
Sbjct: 1   MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDLHRNNNSNSGQPLPQTTPP-- 60

Query: 61  NPLPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLG 120
                       PNS     SA++   +  DEPARTLKRPRLVWTPQLHKRFVDAVAHLG
Sbjct: 61  -----------QPNS-----SAEIAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLG 120

Query: 121 IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATD 180
           IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM+  SGGGGG      GS D  +D
Sbjct: 121 IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMK--SGGGGG------GSGD--SD 180

Query: 181 HLFASSPVPPHLLH-SARTSSDHFLP-YVPMATLQQHHHHQQQMAAAAAVAGHTQPPPPY 240
           HLFASSPVPPH LH ++R SSD F+P +VP++T QQH      +AA         PP  +
Sbjct: 181 HLFASSPVPPHFLHPTSRQSSDLFIPSFVPISTQQQH------IAA---------PPSQF 240

Query: 241 -HRQVG--HFGSSPNGQFEHPFLARQ----SQPIHRMGT-PVHNSVPNYIEDLESANATG 300
            HRQ+   +F S      +  FLARQ     QP+ +  +  +H+ V NY +DL+S    G
Sbjct: 241 LHRQISAVNFTSPTKATDQAMFLARQQSELQQPVFKPSSLHLHSQVANYTQDLKS----G 266

Query: 301 GRKVLTLFPTGDD 302
            + VLTLFPT DD
Sbjct: 301 AKTVLTLFPTRDD 266

[Close]

BLAST of CSPI04G18960.1 vs. TAIR10
Match: AT2G40970.1 (AT2G40970.1 Homeodomain-like superfamily protein)

HSP 1 Score: 234.6 bits (597), Expect = 8.2e-62
Identity = 139/238 (58.40%), Postives = 164/238 (68.91%), Query Frame = 1


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNP----------------- 60
           MRE++ NWF RWE+ELPSP+EL+P+SQTLITP LALAF I +P                 
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  -SNSSPPLPCPSPPLSNPLPGSGNGIVPPNSADFG--DSADLGSGAASDEPARTLKRPRL 120
            S+++P  P P+PP   P+           ++DFG  DS DLGSG+   EPARTLKRPRL
Sbjct: 61  QSSTTPTTPTPTPP---PMM---------MNSDFGGGDSTDLGSGSIGGEPARTLKRPRL 120

Query: 121 VWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSG 180
           VWTPQLHKRFVDAV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG +G
Sbjct: 121 VWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQGGNG 180

Query: 181 GGGGGGAALVGSSDPATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQ 219
            G  GG  +V  SD ATD LFASSPVP H L     S D+ +P +  + + +H   QQ
Sbjct: 181 NGITGGHVIV--SDSATDRLFASSPVPAHFL-----SPDYLMPPLEHSYMGKHVITQQ 219

[Close]

BLAST of CSPI04G18960.1 vs. TAIR10
Match: AT3G46640.3 (AT3G46640.3 Homeodomain-like superfamily protein)

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-37
Identity = 102/220 (46.36%), Postives = 119/220 (54.09%), Query Frame = 1


Query: 10  SRWEDELPSPDELMPLSQTLITPDLALAF-----------DIQNPS-------------- 69
           S WE  LPS ++L  LS +LI P+LA+AF           D+   S              
Sbjct: 20  SEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGP 79

Query: 70  ----------------NSSPPLPCPSPPLSNPLPGSGNGIVPPNSADFGDSADLGSGAAS 129
                           +SSP         SN     G G+ P    D   +A+ G     
Sbjct: 80  NTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDP----DSAMAAEEGDSGTE 139

Query: 130 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 189
           D   +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKY
Sbjct: 140 DLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKY 199

[Close]

BLAST of CSPI04G18960.1 vs. TAIR10
Match: AT5G59570.1 (AT5G59570.1 Homeodomain-like superfamily protein)

HSP 1 Score: 142.5 bits (358), Expect = 4.2e-34
Identity = 106/268 (39.55%), Postives = 138/268 (51.49%), Query Frame = 1


Query: 12  WEDELPSPDELMPLSQTLITPDLALAF----------------------DIQNPSNSSPP 71
           WE  LP+ D+L PLSQ L+   LALAF                       +++ +N+S  
Sbjct: 29  WEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQITLSSLRSSTNASSV 88

Query: 72  LPCPSPPLSNPLPGSGNGIVPPNSADFGDSADL-------GSGAASDEPARTLKRPRLVW 131
           +      + + +PGS         +D G++A +       G     D   +T KRPRLVW
Sbjct: 89  MEEVVDRVESSVPGSDPK--KQKKSDGGEAAAVEDSTAEEGDSGPEDASGKTSKRPRLVW 148

Query: 132 TPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGG 191
           TPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKR+QGL+   
Sbjct: 149 TPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLT--- 208

Query: 192 GGGGAALVGSSDP--ATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQM 246
                      DP  ++D LF+S+PVPP        S+      VP+ ++     +  QM
Sbjct: 209 --------TEEDPYSSSDQLFSSTPVPPQSFQDGGGSNGKLGVPVPVPSMVPIPGYGNQM 268

[Close]

BLAST of CSPI04G18960.1 vs. NCBI nr
Match: gi|449453151|ref|XP_004144322.1| (PREDICTED: transcription factor PCL1-like [Cucumis sativus])

HSP 1 Score: 604.0 bits (1556), Expect = 1.5e-169
Identity = 298/301 (99.00%), Postives = 298/301 (99.00%), Query Frame = 1


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQPPPPYHRQV 240
           FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQ  PPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSSPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGS PNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

Query: 301 D 302
           D
Sbjct: 301 D 301

[Close]

BLAST of CSPI04G18960.1 vs. NCBI nr
Match: gi|659111426|ref|XP_008455739.1| (PREDICTED: transcription factor PCL1-like [Cucumis melo])

HSP 1 Score: 595.5 bits (1534), Expect = 5.2e-167
Identity = 294/301 (97.67%), Postives = 296/301 (98.34%), Query Frame = 1


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGG GGGAALVGSSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGAGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQPPPPYHRQV 240
           FASSPVPPHLLHSARTSSDHFLP+VPMATLQQHHHHQQQMAAAAAVAGHTQ  PPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSSPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGS PNGQFEHPFLARQSQPIHRMGT VHNSVPNYIEDLESANATGGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTSVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

Query: 301 D 302
           D
Sbjct: 301 D 301

[Close]

BLAST of CSPI04G18960.1 vs. NCBI nr
Match: gi|359481436|ref|XP_003632618.1| (PREDICTED: transcription factor PCL1 [Vitis vinifera])

HSP 1 Score: 461.5 bits (1186), Expect = 1.2e-126
Identity = 240/312 (76.92%), Postives = 259/312 (83.01%), Query Frame = 1


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSN-SSPPLPCPSPPLSN 60
           MREE SNWFSRWE+ELPSP+ELMPLSQTLITPDLALAFDI+NP++  +PP P P+P ++ 
Sbjct: 1   MREEESNWFSRWEEELPSPEELMPLSQTLITPDLALAFDIRNPNSPQAPPPPLPTPQVAP 60

Query: 61  PLPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGI 120
           P P        PNSA   DS DLGSGAA DEPARTLKRPRLVWTPQLHKRFVDAVAHLGI
Sbjct: 61  PPPSQ------PNSAPEFDSGDLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGI 120

Query: 121 KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS-------GGGGGGGAALVGS 180
           KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS       GGGG GG A + +
Sbjct: 121 KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGGGGGGAGGGAGLAA 180

Query: 181 SDPATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMA-AAAAVAGHTQ 240
           +DPATDHLFASSPVPPH LH  R SS+HFLP+VP+A LQQHHHH QQMA AAAAVA H Q
Sbjct: 181 ADPATDHLFASSPVPPHFLHPGRASSEHFLPFVPVAALQQHHHHHQQMAVAAAAVAAHPQ 240

Query: 241 PPPPY--HRQVGHFGSSPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGG 300
               Y  HRQVGHFGS PNGQFEHPFL RQSQP+HRMG PVH+ VP Y+EDLESA ATGG
Sbjct: 241 LQTQYHHHRQVGHFGSPPNGQFEHPFLPRQSQPVHRMGAPVHSPVPAYVEDLESATATGG 300

Query: 301 RKVLTLFPTGDD 302
           R+VLTLFPTGDD
Sbjct: 301 RRVLTLFPTGDD 306

[Close]

BLAST of CSPI04G18960.1 vs. NCBI nr
Match: gi|147820325|emb|CAN73573.1| (hypothetical protein VITISV_007446 [Vitis vinifera])

HSP 1 Score: 458.4 bits (1178), Expect = 9.9e-126
Identity = 239/312 (76.60%), Postives = 257/312 (82.37%), Query Frame = 1


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLP-CPSPPLSN 60
           MREE SNWFSRWE+ELPSP+ELMPLSQTLITPDLALAFDI+NP++   P P  P+P ++ 
Sbjct: 1   MREEESNWFSRWEEELPSPEELMPLSQTLITPDLALAFDIRNPNSPQAPTPPLPTPQVAP 60

Query: 61  PLPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGI 120
           P P        PNSA   DS DLGSGAA DEPARTLKRPRLVWTPQLHKRFVDAVAHLGI
Sbjct: 61  PPPSQ------PNSAPEFDSGDLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGI 120

Query: 121 KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS-------GGGGGGGAALVGS 180
           KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS       GGGG GG A + +
Sbjct: 121 KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGGGGGGAGGGAGLAA 180

Query: 181 SDPATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMA-AAAAVAGHTQ 240
           +DPATDHLFASSPVPPH LH  R SS+HFLP+VP+A LQQHHHH QQMA AAAAVA H Q
Sbjct: 181 ADPATDHLFASSPVPPHFLHPGRASSEHFLPFVPVAALQQHHHHHQQMAVAAAAVAAHPQ 240

Query: 241 PPPPY--HRQVGHFGSSPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGG 300
               Y  HRQVGHFGS PNGQFEHPFL RQSQP+HRMG PVH+ VP Y+EDLESA ATGG
Sbjct: 241 LQTQYHHHRQVGHFGSPPNGQFEHPFLPRQSQPVHRMGAPVHSPVPAYVEDLESATATGG 300

Query: 301 RKVLTLFPTGDD 302
           R+VLTLFPTGDD
Sbjct: 301 RRVLTLFPTGDD 306

[Close]

BLAST of CSPI04G18960.1 vs. NCBI nr
Match: gi|802754103|ref|XP_012088642.1| (PREDICTED: transcription factor PCL1-like [Jatropha curcas])

HSP 1 Score: 447.6 bits (1150), Expect = 1.7e-122
Identity = 240/324 (74.07%), Postives = 260/324 (80.25%), Query Frame = 1


Query: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSS----------PPL 60
           MRE+ SNWFSRWE+ELPSP+ELMPLSQTLITPDLALAFDI+NP+N++          PP 
Sbjct: 1   MREDDSNWFSRWEEELPSPEELMPLSQTLITPDLALAFDIRNPTNTTVNNTSLQQNPPPP 60

Query: 61  PCPSPPLS---NPLPGSGNGIVPPNSADFG-DSADLGSGAASDEPARTLKRPRLVWTPQL 120
           P P PP S   +PLP S      PNSA++  DSADLGSGAA DEPARTLKRPRLVWTPQL
Sbjct: 61  PPPPPPTSTTPSPLPPS-----QPNSAEYAADSADLGSGAAGDEPARTLKRPRLVWTPQL 120

Query: 121 HKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGG- 180
           HKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GG GG 
Sbjct: 121 HKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGAGGV 180

Query: 181 -------GAALVGSSDPATDHLFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQ 240
                  GA L  + D AT+HLFASSPVPPH LH  R +SDHFLPYVP+A L QHHHHQQ
Sbjct: 181 NGTGAGAGAGLT-AGDAATEHLFASSPVPPHFLHPGRPNSDHFLPYVPVAAL-QHHHHQQ 240

Query: 241 QMAAAAAVAGHTQPPPPYHRQVGHFGSSPNGQFEHPFLARQS-QPIHRMGTPVHNSVPNY 300
           QMAAAAA   H Q    YHRQ+GHFGS  NGQFEHPFLARQ+ QP+HRMG PV N+VP Y
Sbjct: 241 QMAAAAAAVAHPQLQNQYHRQMGHFGSPQNGQFEHPFLARQAQQPVHRMGAPVQNTVPGY 300

Query: 301 IEDLESANATGGRKVLTLFPTGDD 302
           +EDLESAN +GGRKVLTLFPTGDD
Sbjct: 301 VEDLESANGSGGRKVLTLFPTGDD 317

The following BLAST results are available for this feature:

BLAST of CSPI04G18960.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PCL1_ORYSJ	1.1e-36	46.81	Transcription factor PCL1 OS=Oryza sativa subsp. japonica GN=PCL1 PE=2 SV=1	[more]
PCL1_ARATH	2.5e-36	39.87	Transcription factor LUX OS=Arabidopsis thaliana GN=LUX PE=1 SV=1	[more]
PCLL_ARATH	7.5e-33	39.55	Transcription factor BOA OS=Arabidopsis thaliana GN=BOA PE=2 SV=1	[more]
ARR1_ARATH	4.3e-20	61.33	Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2	[more]
ORR21_ORYSI	1.2e-19	34.65	Two-component response regulator ORR21 OS=Oryza sativa subsp. indica GN=RR21 PE=...	[more]

BLAST of CSPI04G18960.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0V3_CUCSA	1.0e-169	99.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G425730 PE=4 SV=1	[more]
F6HQP5_VITVI	8.1e-127	76.92	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g00900 PE=4 SV=...	[more]
A5AMU0_VITVI	6.9e-126	76.60	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007446 PE=4 SV=1	[more]
A0A067JV01_JATCU	1.2e-122	74.07	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00067 PE=4 SV=1	[more]
B9P528_POPTR	3.3e-120	72.22	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s03240g PE=4 SV=1	[more]

BLAST of CSPI04G18960.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10760.1	2.7e-97	62.29	Homeodomain-like superfamily protein	[more]
AT5G05090.1	1.4e-77	57.51	Homeodomain-like superfamily protein	[more]
AT2G40970.1	8.2e-62	58.40	Homeodomain-like superfamily protein	[more]
AT3G46640.3	1.8e-37	46.36	Homeodomain-like superfamily protein	[more]
AT5G59570.1	4.2e-34	39.55	Homeodomain-like superfamily protein	[more]

BLAST of CSPI04G18960.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453151\|ref\|XP_004144322.1\|	1.5e-169	99.00	PREDICTED: transcription factor PCL1-like [Cucumis sativus]	[more]
gi\|659111426\|ref\|XP_008455739.1\|	5.2e-167	97.67	PREDICTED: transcription factor PCL1-like [Cucumis melo]	[more]
gi\|359481436\|ref\|XP_003632618.1\|	1.2e-126	76.92	PREDICTED: transcription factor PCL1 [Vitis vinifera]	[more]
gi\|147820325\|emb\|CAN73573.1\|	9.9e-126	76.60	hypothetical protein VITISV_007446 [Vitis vinifera]	[more]
gi\|802754103\|ref\|XP_012088642.1\|	1.7e-122	74.07	PREDICTED: transcription factor PCL1-like [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI04G18960	CSPI04G18960	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI04G18960.1	CSPI04G18960.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI04G18960.1.cds1	CSPI04G18960.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 100..149 score: 1.
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 98..150 score: 3.2
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 96..155 score: 1.2
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 94..154 score: 2.87
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 94..153 score: 11
None	No IPR available	PANTHER	PTHR31442	FAMILY NOT NAMED	coord: 1..290 score: 5.9E
None	No IPR available	PANTHER	PTHR31442:SF11	SUBFAMILY NOT NAMED	coord: 1..290 score: 5.9E