CSPI04G13510.1 (mRNA) Wild cucumber (PI 183967)

Overview
NameCSPI04G13510.1
TypemRNA
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionLipoxygenase
LocationChr4 : 11540896 .. 11541498 (+)
Sequence length603
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAGAGAAATACAATACAAGAACCAACAGAAAAAGCAAGAGGGGCCATGGTGACAAAAAAGACGAGCCATGGTGGCCACTTCTCAACACTCCTCAAGATCTAATAGACATAGTGACAAACATTGCTTGGGTAGCATCAGCACACCATGCGGCTGTGAACTTTGGGCAATATTCATATGCAGCGTATTTTCCAAACATGCCAAGTATAGCAAGAACCAATATGCCTACAGAAGATAATAATCCTGCACTTTGGAAAAGCTTCTTAGAAAAGCCGGAGGAGTTGCTTCTAAATTCCTTTCCTTCGCAATATCAAGCAACACAGGTAATGATGGTGTTGAATCTGTTATCAAGTCACTCTCGTGATGAAGAGTTTGTTGGAAATAAAATGGAGCCATCGTGGGGTGATAATCCGACAATAAAGGCGGCATTTGAAAGGTTTAGTGCAAATATAAAAAACTTGGACCTAATAATTGATACCAGGAACGCTGATTACAACTTGAAGAATAGAACTGGAGCTGGAGTTCCACCTTATGAACTTTTGAAGCCATTTTCAGGTCCTGGAGTTACCGGAAAGGGAGTTCCATACAGTGTTTCTATTTAA

mRNA sequence

ATGATAGAGAAATACAATACAAGAACCAACAGAAAAAGCAAGAGGGGCCATGGTGACAAAAAAGACGAGCCATGGTGGCCACTTCTCAACACTCCTCAAGATCTAATAGACATAGTGACAAACATTGCTTGGGTAGCATCAGCACACCATGCGGCTGTGAACTTTGGGCAATATTCATATGCAGCGTATTTTCCAAACATGCCAAGTATAGCAAGAACCAATATGCCTACAGAAGATAATAATCCTGCACTTTGGAAAAGCTTCTTAGAAAAGCCGGAGGAGTTGCTTCTAAATTCCTTTCCTTCGCAATATCAAGCAACACAGGTAATGATGGTGTTGAATCTGTTATCAAGTCACTCTCGTGATGAAGAGTTTGTTGGAAATAAAATGGAGCCATCGTGGGGTGATAATCCGACAATAAAGGCGGCATTTGAAAGGTTTAGTGCAAATATAAAAAACTTGGACCTAATAATTGATACCAGGAACGCTGATTACAACTTGAAGAATAGAACTGGAGCTGGAGTTCCACCTTATGAACTTTTGAAGCCATTTTCAGGTCCTGGAGTTACCGGAAAGGGAGTTCCATACAGTGTTTCTATTTAA

Coding sequence (CDS)

ATGATAGAGAAATACAATACAAGAACCAACAGAAAAAGCAAGAGGGGCCATGGTGACAAAAAAGACGAGCCATGGTGGCCACTTCTCAACACTCCTCAAGATCTAATAGACATAGTGACAAACATTGCTTGGGTAGCATCAGCACACCATGCGGCTGTGAACTTTGGGCAATATTCATATGCAGCGTATTTTCCAAACATGCCAAGTATAGCAAGAACCAATATGCCTACAGAAGATAATAATCCTGCACTTTGGAAAAGCTTCTTAGAAAAGCCGGAGGAGTTGCTTCTAAATTCCTTTCCTTCGCAATATCAAGCAACACAGGTAATGATGGTGTTGAATCTGTTATCAAGTCACTCTCGTGATGAAGAGTTTGTTGGAAATAAAATGGAGCCATCGTGGGGTGATAATCCGACAATAAAGGCGGCATTTGAAAGGTTTAGTGCAAATATAAAAAACTTGGACCTAATAATTGATACCAGGAACGCTGATTACAACTTGAAGAATAGAACTGGAGCTGGAGTTCCACCTTATGAACTTTTGAAGCCATTTTCAGGTCCTGGAGTTACCGGAAAGGGAGTTCCATACAGTGTTTCTATTTAA
Homology
[Close]
BLAST of CSPI04G13510.1 vs. Swiss-Prot
Match: LOX21_SOLTU (Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.3e-70
Identity = 122/185 (65.95%), Postives = 143/185 (77.30%), Query Frame = 1 

Query: 16  GHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTNM 75
           GHGDK+DEPWWP L TP DLI I+T I WV S HHAAVNFGQYSYA YFPN P++AR+ M
Sbjct: 715 GHGDKRDEPWWPELKTPNDLIGIITTIVWVTSGHHAAVNFGQYSYAGYFPNRPTVARSKM 774

Query: 76  PTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPSWG 135
           PTED     W+ F+ KPEE LL  FPSQ QAT+VM +L++LS+HS DEE++G K+EP W 
Sbjct: 775 PTEDPTAEEWEWFMNKPEEALLRCFPSQIQATKVMAILDVLSNHSPDEEYIGEKIEPYWA 834

Query: 136 DNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKGVP 195
           ++P I AAFE FS  +K L+ IID RN D  L NR GAGV PYELLKP+S PGVTGKGVP
Sbjct: 835 EDPVINAAFEVFSGKLKELEGIIDARNNDSKLSNRNGAGVMPYELLKPYSEPGVTGKGVP 894

Query: 196 YSVSI 201
           YS+SI
Sbjct: 895 YSISI 899

[Close]
BLAST of CSPI04G13510.1 vs. Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 7.9e-63
Identity = 113/185 (61.08%), Postives = 133/185 (71.89%), Query Frame = 1 

Query: 16  GHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTNM 75
           GHGDKKDEPWWP+L T  DLI +VT IAWV S HHAAVNFGQY Y  YFPN P+  R  M
Sbjct: 712 GHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYGGYFPNRPTTTRIRM 771

Query: 76  PTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPSWG 135
           PTED      K F E PE++LL ++PSQ QAT VM+ L+LLS+HS DEE++G + E SW 
Sbjct: 772 PTEDPTDEALKEFYESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEASWA 831

Query: 136 DNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKGVP 195
           + P I AAFERF   ++ L+ +ID RN +  LKNR GAGV  YELLKP S  GVTG GVP
Sbjct: 832 NEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVP 891

Query: 196 YSVSI 201
           YS+SI
Sbjct: 892 YSISI 896

[Close]
BLAST of CSPI04G13510.1 vs. Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 9.7e-61
Identity = 107/186 (57.53%), Postives = 136/186 (73.12%), Query Frame = 1 

Query: 15  RGHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTN 74
           +GH DKKDEPWWP+ +T ++L+ I+T I WV S HHAAVNFGQY YA YFPN P++ R N
Sbjct: 711 KGHADKKDEPWWPVCDTKENLVQILTIIMWVTSGHHAAVNFGQYHYAGYFPNRPTVVRRN 770

Query: 75  MPTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPSW 134
           +P E+N     K F+ +PEE+LL S PSQ QA +VM  L++LSSHS DEE++G   EP+W
Sbjct: 771 IPVEENRDDEMKKFMARPEEVLLQSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAEPAW 830

Query: 135 GDNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKGV 194
              P +KAAFE+FS  +K  +  ID RN +   KNR GAG+ PYELLKPFS PGVTG+G+
Sbjct: 831 LAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGI 890

Query: 195 PYSVSI 201
           P S+SI
Sbjct: 891 PNSISI 896

[Close]
BLAST of CSPI04G13510.1 vs. Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 219.5 bits (558), Expect = 3.2e-56
Identity = 102/187 (54.55%), Postives = 134/187 (71.66%), Query Frame = 1 

Query: 15  RGHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTN 74
           +GHGDKKD PWWP L++P+ L   +T I WVA+AHHAAVNFGQY +  YFPN PSIART 
Sbjct: 738 KGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTV 797

Query: 75  MPTEDN-NPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPS 134
           MP E+  + A  + FL+ P++ L   FPSQ QAT VM VL++LSSHS DEE++G +    
Sbjct: 798 MPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSSHSTDEEYLGGEQTRP 857

Query: 135 WGDNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKG 194
           W  +  ++AA++ F+A +K ++ +ID RN D  LKNR GAG+ PY+L+KPFS  GVTG G
Sbjct: 858 WNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDSGVTGMG 917

Query: 195 VPYSVSI 201
           +P S SI
Sbjct: 918 IPNSTSI 924

[Close]
BLAST of CSPI04G13510.1 vs. Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.6e-55
Identity = 101/187 (54.01%), Postives = 133/187 (71.12%), Query Frame = 1 

Query: 15  RGHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTN 74
           +GHGDKKD PWWP L++P+ L   +T I WVA+AHHAAVNFGQY +  YFPN PSIART 
Sbjct: 755 KGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTV 814

Query: 75  MPTEDN-NPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPS 134
           MP E+  + A  + FL+ P++ L   FPSQ QAT VM VL++LS+HS DEE++G +    
Sbjct: 815 MPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSTHSTDEEYLGGEQTRP 874

Query: 135 WGDNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKG 194
           W  +  ++AA+  F+A +K ++ +ID RN D  LKNR GAG+ PY+L+KPFS  GVTG G
Sbjct: 875 WNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMG 934

Query: 195 VPYSVSI 201
           +P S SI
Sbjct: 935 IPNSTSI 941

[Close]
BLAST of CSPI04G13510.1 vs. TrEMBL
Match: A0A125S6K8_CUCME (Lipoxygenase OS=Cucumis melo var. makuwa GN=LOX13 PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 3.4e-89
Identity = 155/185 (83.78%), Postives = 172/185 (92.97%), Query Frame = 1 

Query: 16  GHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTNM 75
           GH DK+++PWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQY+Y+ YFPN PSI RTNM
Sbjct: 722 GHADKQEKPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYAYSGYFPNRPSITRTNM 781

Query: 76  PTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPSWG 135
           PTEDNNPALWKSFLEKPEELLL+SFPSQ+QATQVM+V+N+LSSHS DEE++G  MEPSWG
Sbjct: 782 PTEDNNPALWKSFLEKPEELLLDSFPSQFQATQVMLVMNMLSSHSPDEEYIGKDMEPSWG 841

Query: 136 DNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKGVP 195
           DNPTIKAAFERFS +IKN++LIID RN+D NLKNRTGAGV PYELLKPFS  GVTGKGVP
Sbjct: 842 DNPTIKAAFERFSTSIKNMELIIDHRNSDSNLKNRTGAGVTPYELLKPFSESGVTGKGVP 901

Query: 196 YSVSI 201
           YS+SI
Sbjct: 902 YSISI 906

[Close]
BLAST of CSPI04G13510.1 vs. TrEMBL
Match: A0A067EN38_CITSI (Lipoxygenase OS=Citrus sinensis GN=CISIN_1g002644mg PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.5e-73
Identity = 129/185 (69.73%), Postives = 153/185 (82.70%), Query Frame = 1 

Query: 16  GHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTNM 75
           GH DKKDEPWWP+L TP+DLIDI+T IAWVAS HHAAVNFGQY++  YFPN P++ART M
Sbjct: 483 GHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKM 542

Query: 76  PTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPSWG 135
           P ED +   WK FLEKPE++LL  FPSQ QAT VM +L+ LSSHS DEE++G +ME +WG
Sbjct: 543 PIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWG 602

Query: 136 DNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKGVP 195
           D+P IKAAFERFS  +K L+ IID RNA+ NLKNRTGAG+ PYEL+KPFS PGVTG+GVP
Sbjct: 603 DDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVP 662

Query: 196 YSVSI 201
           YS+SI
Sbjct: 663 YSISI 667

[Close]
BLAST of CSPI04G13510.1 vs. TrEMBL
Match: V4TFS9_9ROSI (Lipoxygenase OS=Citrus clementina GN=CICLE_v10014202mg PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.5e-73
Identity = 129/185 (69.73%), Postives = 153/185 (82.70%), Query Frame = 1 

Query: 16  GHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTNM 75
           GH DKKDEPWWP+L TP+DLIDI+T IAWVAS HHAAVNFGQY++  YFPN P++ART M
Sbjct: 713 GHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKM 772

Query: 76  PTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPSWG 135
           P ED +   WK FLEKPE++LL  FPSQ QAT VM +L+ LSSHS DEE++G +ME +WG
Sbjct: 773 PIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWG 832

Query: 136 DNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKGVP 195
           D+P IKAAFERFS  +K L+ IID RNA+ NLKNRTGAG+ PYEL+KPFS PGVTG+GVP
Sbjct: 833 DDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVP 892

Query: 196 YSVSI 201
           YS+SI
Sbjct: 893 YSISI 897

[Close]
BLAST of CSPI04G13510.1 vs. TrEMBL
Match: A0A067EZW7_CITSI (Lipoxygenase OS=Citrus sinensis GN=CISIN_1g002644mg PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.5e-73
Identity = 129/185 (69.73%), Postives = 153/185 (82.70%), Query Frame = 1 

Query: 16  GHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTNM 75
           GH DKKDEPWWP+L TP+DLIDI+T IAWVAS HHAAVNFGQY++  YFPN P++ART M
Sbjct: 618 GHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKM 677

Query: 76  PTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPSWG 135
           P ED +   WK FLEKPE++LL  FPSQ QAT VM +L+ LSSHS DEE++G +ME +WG
Sbjct: 678 PIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWG 737

Query: 136 DNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKGVP 195
           D+P IKAAFERFS  +K L+ IID RNA+ NLKNRTGAG+ PYEL+KPFS PGVTG+GVP
Sbjct: 738 DDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVP 797

Query: 196 YSVSI 201
           YS+SI
Sbjct: 798 YSISI 802

[Close]
BLAST of CSPI04G13510.1 vs. TrEMBL
Match: A0A067ERI5_CITSI (Lipoxygenase OS=Citrus sinensis GN=CISIN_1g002644mg PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.5e-73
Identity = 129/185 (69.73%), Postives = 153/185 (82.70%), Query Frame = 1 

Query: 16  GHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTNM 75
           GH DKKDEPWWP+L TP+DLIDI+T IAWVAS HHAAVNFGQY++  YFPN P++ART M
Sbjct: 713 GHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKM 772

Query: 76  PTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPSWG 135
           P ED +   WK FLEKPE++LL  FPSQ QAT VM +L+ LSSHS DEE++G +ME +WG
Sbjct: 773 PIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWG 832

Query: 136 DNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKGVP 195
           D+P IKAAFERFS  +K L+ IID RNA+ NLKNRTGAG+ PYEL+KPFS PGVTG+GVP
Sbjct: 833 DDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVP 892

Query: 196 YSVSI 201
           YS+SI
Sbjct: 893 YSISI 897

[Close]
BLAST of CSPI04G13510.1 vs. TAIR10
Match: AT3G45140.1 (AT3G45140.1 lipoxygenase 2)

HSP 1 Score: 241.5 bits (615), Expect = 4.4e-64
Identity = 113/185 (61.08%), Postives = 133/185 (71.89%), Query Frame = 1 

Query: 16  GHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTNM 75
           GHGDKKDEPWWP+L T  DLI +VT IAWV S HHAAVNFGQY Y  YFPN P+  R  M
Sbjct: 712 GHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYGGYFPNRPTTTRIRM 771

Query: 76  PTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPSWG 135
           PTED      K F E PE++LL ++PSQ QAT VM+ L+LLS+HS DEE++G + E SW 
Sbjct: 772 PTEDPTDEALKEFYESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEASWA 831

Query: 136 DNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKGVP 195
           + P I AAFERF   ++ L+ +ID RN +  LKNR GAGV  YELLKP S  GVTG GVP
Sbjct: 832 NEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVP 891

Query: 196 YSVSI 201
           YS+SI
Sbjct: 892 YSISI 896

[Close]
BLAST of CSPI04G13510.1 vs. TAIR10
Match: AT1G67560.1 (AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 184.9 bits (468), Expect = 4.9e-47
Identity = 90/188 (47.87%), Postives = 123/188 (65.43%), Query Frame = 1 

Query: 15  RGHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTN 74
           +GH DKKDEPWWP LNT QDL  I+TN+ W+AS  HAA+NFGQY +  Y PN P++ R  
Sbjct: 732 KGHYDKKDEPWWPKLNTTQDLSQILTNMIWIASGQHAAINFGQYPFGGYVPNRPTLLRKL 791

Query: 75  MPTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFV--GNKMEP 134
           +P E +    ++ F+  P+   L S P+Q QAT+VM V   LS+HS DEE++    +++ 
Sbjct: 792 IPQETDPD--YEMFMRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQR 851

Query: 135 SWGDNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGK 194
            W  +  +   F +FS  +  ++  I+ RN D  LKNRTGAG+PPYELL P S  GVTG+
Sbjct: 852 HWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGR 911

Query: 195 GVPYSVSI 201
           G+P S+SI
Sbjct: 912 GIPNSISI 917

[Close]
BLAST of CSPI04G13510.1 vs. TAIR10
Match: AT1G72520.1 (AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 181.0 bits (458), Expect = 7.1e-46
Identity = 90/186 (48.39%), Postives = 121/186 (65.05%), Query Frame = 1 

Query: 16  GHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTNM 75
           GH D +D  WWP L+T +DL+ ++T I W+ASA HAA+NFGQY Y  Y PN P + R  +
Sbjct: 743 GHADHRDAEWWPKLSTVEDLVSVITTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLI 802

Query: 76  PTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPS-W 135
           P  D +   + SF+E P++   +S PS  Q T+ M V++ LS+HS DEE++G + +PS W
Sbjct: 803 P--DESDPEFTSFIEDPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIW 862

Query: 136 GDNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKGV 195
             +  I  AF  FSA I  ++  ID RN D + +NR GAGV PYEL+ P S PGVT +GV
Sbjct: 863 TGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCRGV 922

Query: 196 PYSVSI 201
           P SVSI
Sbjct: 923 PNSVSI 926

[Close]
BLAST of CSPI04G13510.1 vs. TAIR10
Match: AT1G17420.1 (AT1G17420.1 lipoxygenase 3)

HSP 1 Score: 175.6 bits (444), Expect = 3.0e-44
Identity = 89/186 (47.85%), Postives = 120/186 (64.52%), Query Frame = 1 

Query: 16  GHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTNM 75
           GH D +D  WWP L+T  DL+ I+T + W+ASA HAA+NFGQY Y  Y PN P + R  +
Sbjct: 736 GHADLRDADWWPELSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLI 795

Query: 76  PTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPS-W 135
           P  D +   + SF+  PE+   +S PS  Q ++ M V++ LS+HS DEE++G + +PS W
Sbjct: 796 P--DESDPEYASFISHPEKYYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPSIW 855

Query: 136 GDNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKGV 195
             +  I  AF  F+A I  ++  I+ RNAD + +NR GAGV PYELL P S PGVT +GV
Sbjct: 856 TGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGV 915

Query: 196 PYSVSI 201
           P SVSI
Sbjct: 916 PNSVSI 919

[Close]
BLAST of CSPI04G13510.1 vs. TAIR10
Match: AT1G55020.1 (AT1G55020.1 lipoxygenase 1)

HSP 1 Score: 167.9 bits (424), Expect = 6.3e-42
Identity = 84/187 (44.92%), Postives = 114/187 (60.96%), Query Frame = 1 

Query: 14  KRGHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIART 73
           + GHGDKK EPWWP + T ++L++  T I WVASA HAAVNFGQY  A Y PN P+I+R 
Sbjct: 675 EEGHGDKKSEPWWPKMQTREELVESCTIIIWVASALHAAVNFGQYPVAGYLPNRPTISRQ 734

Query: 74  NMPTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPS 133
            MP E  N   ++   + P+++ L +  +Q Q    + ++ +LS+HS DE ++G +    
Sbjct: 735 YMPKE--NTPEFEELEKNPDKVFLKTITAQLQTLLGISLIEILSTHSSDEVYLGQRDSKE 794

Query: 134 WGDNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKG 193
           W        AFE+F   +K ++  ID RN D  LKNRTG    PY LL P S  GVTG+G
Sbjct: 795 WAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRG 854

Query: 194 VPYSVSI 201
           +P SVSI
Sbjct: 855 IPNSVSI 859

[Close]
BLAST of CSPI04G13510.1 vs. NCBI nr
Match: gi|987644900|gb|AME15769.1| (lipoxygenase 13 [Cucumis melo var. makuwa])

HSP 1 Score: 335.9 bits (860), Expect = 4.9e-89
Identity = 155/185 (83.78%), Postives = 172/185 (92.97%), Query Frame = 1 

Query: 16  GHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTNM 75
           GH DK+++PWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQY+Y+ YFPN PSI RTNM
Sbjct: 722 GHADKQEKPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYAYSGYFPNRPSITRTNM 781

Query: 76  PTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPSWG 135
           PTEDNNPALWKSFLEKPEELLL+SFPSQ+QATQVM+V+N+LSSHS DEE++G  MEPSWG
Sbjct: 782 PTEDNNPALWKSFLEKPEELLLDSFPSQFQATQVMLVMNMLSSHSPDEEYIGKDMEPSWG 841

Query: 136 DNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKGVP 195
           DNPTIKAAFERFS +IKN++LIID RN+D NLKNRTGAGV PYELLKPFS  GVTGKGVP
Sbjct: 842 DNPTIKAAFERFSTSIKNMELIIDHRNSDSNLKNRTGAGVTPYELLKPFSESGVTGKGVP 901

Query: 196 YSVSI 201
           YS+SI
Sbjct: 902 YSISI 906

[Close]
BLAST of CSPI04G13510.1 vs. NCBI nr
Match: gi|659097667|ref|XP_008449748.1| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 335.9 bits (860), Expect = 4.9e-89
Identity = 155/185 (83.78%), Postives = 172/185 (92.97%), Query Frame = 1 

Query: 16  GHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTNM 75
           GH DK+++PWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQY+Y+ YFPN PSI RTNM
Sbjct: 722 GHADKQEKPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYAYSGYFPNRPSITRTNM 781

Query: 76  PTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPSWG 135
           PTEDNNPALWKSFLEKPEELLL+SFPSQ+QATQVM+V+N+LSSHS DEE++G  MEPSWG
Sbjct: 782 PTEDNNPALWKSFLEKPEELLLDSFPSQFQATQVMLVMNMLSSHSPDEEYIGKDMEPSWG 841

Query: 136 DNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKGVP 195
           DNPTIKAAFERFS +IKN++LIID RN+D NLKNRTGAGV PYELLKPFS  GVTGKGVP
Sbjct: 842 DNPTIKAAFERFSTSIKNMELIIDHRNSDSNLKNRTGAGVTPYELLKPFSESGVTGKGVP 901

Query: 196 YSVSI 201
           YS+SI
Sbjct: 902 YSISI 906

[Close]
BLAST of CSPI04G13510.1 vs. NCBI nr
Match: gi|449448768|ref|XP_004142137.1| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 4.2e-88
Identity = 156/191 (81.68%), Postives = 169/191 (88.48%), Query Frame = 1 

Query: 10  NRKSKRGHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPS 69
           N    +GH DK+DEPWWP+LNTPQDLIDIVTNIAWVASAHHAAVNFGQY+YA YFPN PS
Sbjct: 721 NEIRTKGHADKQDEPWWPVLNTPQDLIDIVTNIAWVASAHHAAVNFGQYAYAGYFPNRPS 780

Query: 70  IARTNMPTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNK 129
           IARTNMPTED NP LWKSFLEKPE+LLLN+FPSQYQATQVM  LN+LSSHS DEE++G  
Sbjct: 781 IARTNMPTEDYNPTLWKSFLEKPEDLLLNAFPSQYQATQVMFTLNVLSSHSPDEEYLGKN 840

Query: 130 MEPSWGDNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGV 189
           MEPSW DNP IKA+FERFSA +K L+LIIDTRN D  LKNRTGAGV PYELLKPFSGPGV
Sbjct: 841 MEPSWNDNPIIKASFERFSAKLKELELIIDTRNVDPILKNRTGAGVTPYELLKPFSGPGV 900

Query: 190 TGKGVPYSVSI 201
           TGKGVPYS+SI
Sbjct: 901 TGKGVPYSISI 911

[Close]
BLAST of CSPI04G13510.1 vs. NCBI nr
Match: gi|449448966|ref|XP_004142236.1| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 2.1e-87
Identity = 152/185 (82.16%), Postives = 169/185 (91.35%), Query Frame = 1 

Query: 16  GHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPSIARTNM 75
           GH DK++EPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQY+YA YFPN PSI RTNM
Sbjct: 720 GHADKQEEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYAYAGYFPNRPSITRTNM 779

Query: 76  PTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNKMEPSWG 135
           PTEDNNP LWKSFLEKPEELLL++FPSQ QATQ+M+V+++LSSHS DEE++G  MEPSWG
Sbjct: 780 PTEDNNPTLWKSFLEKPEELLLDAFPSQLQATQIMLVMSMLSSHSTDEEYIGKDMEPSWG 839

Query: 136 DNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGVTGKGVP 195
           DNPTIK AFERFS +IKN++LIID +NAD NLKNRTGAGV PYELLKPFS  GVTGKGVP
Sbjct: 840 DNPTIKEAFERFSTSIKNMELIIDHKNADSNLKNRTGAGVTPYELLKPFSESGVTGKGVP 899

Query: 196 YSVSI 201
           YS+SI
Sbjct: 900 YSISI 904

[Close]
BLAST of CSPI04G13510.1 vs. NCBI nr
Match: gi|659097669|ref|XP_008449749.1| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 326.6 bits (836), Expect = 3.0e-86
Identity = 153/191 (80.10%), Postives = 167/191 (87.43%), Query Frame = 1 

Query: 10  NRKSKRGHGDKKDEPWWPLLNTPQDLIDIVTNIAWVASAHHAAVNFGQYSYAAYFPNMPS 69
           N    +GH DK++EPWWP+LNTPQDLIDIVT+IAWVASAHHAAVNFGQY+Y+ YFPN PS
Sbjct: 722 NEIRTKGHADKQNEPWWPVLNTPQDLIDIVTSIAWVASAHHAAVNFGQYAYSGYFPNRPS 781

Query: 70  IARTNMPTEDNNPALWKSFLEKPEELLLNSFPSQYQATQVMMVLNLLSSHSRDEEFVGNK 129
           I RTNMPTED NP LWKSFLEKPE+LLLNSFPSQYQATQVM  LN+LSSHS DEE++G  
Sbjct: 782 ITRTNMPTEDYNPTLWKSFLEKPEDLLLNSFPSQYQATQVMFTLNVLSSHSPDEEYLGKN 841

Query: 130 MEPSWGDNPTIKAAFERFSANIKNLDLIIDTRNADYNLKNRTGAGVPPYELLKPFSGPGV 189
           MEPSW DNP IKAAFERFSA +K L+LIIDTRN D  LKNRTGAGV PYELLKP SGPGV
Sbjct: 842 MEPSWNDNPAIKAAFERFSARLKELELIIDTRNVDPILKNRTGAGVTPYELLKPLSGPGV 901

Query: 190 TGKGVPYSVSI 201
           TGKGVPYS+SI
Sbjct: 902 TGKGVPYSISI 912

The following BLAST results are available for this feature:
BLAST of CSPI04G13510.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LOX21_SOLTU2.3e-7065.95Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=... [more]
LOX2_ARATH7.9e-6361.08Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1[more]
LOX23_HORVU9.7e-6157.53Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1[more]
LOXC1_ORYSJ3.2e-5654.55Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV... [more]
LOXC2_ORYSJ1.6e-5554.01Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX... [more]
BLAST of CSPI04G13510.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A125S6K8_CUCME3.4e-8983.78Lipoxygenase OS=Cucumis melo var. makuwa GN=LOX13 PE=2 SV=1[more]
A0A067EN38_CITSI4.5e-7369.73Lipoxygenase OS=Citrus sinensis GN=CISIN_1g002644mg PE=3 SV=1[more]
V4TFS9_9ROSI4.5e-7369.73Lipoxygenase OS=Citrus clementina GN=CICLE_v10014202mg PE=3 SV=1[more]
A0A067EZW7_CITSI4.5e-7369.73Lipoxygenase OS=Citrus sinensis GN=CISIN_1g002644mg PE=3 SV=1[more]
A0A067ERI5_CITSI4.5e-7369.73Lipoxygenase OS=Citrus sinensis GN=CISIN_1g002644mg PE=3 SV=1[more]
BLAST of CSPI04G13510.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G45140.14.4e-6461.08 lipoxygenase 2[more]
AT1G67560.14.9e-4747.87 PLAT/LH2 domain-containing lipoxygenase family protein[more]
AT1G72520.17.1e-4648.39 PLAT/LH2 domain-containing lipoxygenase family protein[more]
AT1G17420.13.0e-4447.85 lipoxygenase 3[more]
AT1G55020.16.3e-4244.92 lipoxygenase 1[more]
BLAST of CSPI04G13510.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|987644900|gb|AME15769.1|4.9e-8983.78lipoxygenase 13 [Cucumis melo var. makuwa][more]
gi|659097667|ref|XP_008449748.1|4.9e-8983.78PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo][more]
gi|449448768|ref|XP_004142137.1|4.2e-8881.68PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis sativus][more]
gi|449448966|ref|XP_004142236.1|2.1e-8782.16PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic [Cucumis sativus][more]
gi|659097669|ref|XP_008449749.1|3.0e-8680.10PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000907LipOase
IPR013819LipOase_C
Vocabulary: Molecular Function
TermDefinition
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0031408 oxylipin biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function GO:0016165 linoleate 13S-lipoxygenase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI04G13510CSPI04G13510gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI04G13510.1CSPI04G13510.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI04G13510.1.cds1CSPI04G13510.1.cds1CDS


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000907LipoxygenasePANTHERPTHR11771LIPOXYGENASEcoord: 15..200
score: 4.3E
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 14..183
score: 3.8
IPR013819Lipoxygenase, C-terminalPROFILEPS51393LIPOXYGENASE_3coord: 1..200
score: 66
IPR013819Lipoxygenase, C-terminalunknownSSF48484Lipoxigenasecoord: 15..200
score: 8.5
NoneNo IPR availableGENE3DG3DSA:1.20.245.10coord: 14..200
score: 4.7
NoneNo IPR availablePANTHERPTHR11771:SF42PROTEIN C13C4.7coord: 15..200
score: 4.3E